View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6459_high_13 (Length: 338)
Name: NF6459_high_13
Description: NF6459
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6459_high_13 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 324; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 324; E-Value: 0
Query Start/End: Original strand, 3 - 338
Target Start/End: Complemental strand, 46232020 - 46231685
Alignment:
| Q |
3 |
accaataccaaccttgttatgatcatgagagaacgaggcctcaccattggatatgtatcttcctaattgaggttttgaccaaagtgatggtttcaaatgc |
102 |
Q |
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| T |
46232020 |
accaatatccaccttgttatgatcatgagagaacgaggcctcaccattggatatgtatcttcctaattgaggttttgaccaaagtgatggtttcaaatgc |
46231921 |
T |
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| Q |
103 |
tgttgtacagtggcagaaattctgaatttttgggcattttcccagccagtcacataccactgctctagattctgagtcgttgttccaaatgttattattc |
202 |
Q |
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| T |
46231920 |
tgttgtacagtggcagaaattctgaattcttgggcattttcccagccagtcacataccactgctctagattctgagtcgttgttccaaatgttattattc |
46231821 |
T |
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| Q |
203 |
ctttgcttccaaatactccacaaagtgattgcaaatataccaatctgctctgcgctaaaattctgcataatgcagaacacgatttctgctacgaacctgc |
302 |
Q |
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| T |
46231820 |
ctttgcttccaaatactccacaaagtgattgcaaatataccaatctgctctgcgctaaaattctgcataatgcagaacacgatttctgctacgaacctgc |
46231721 |
T |
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| Q |
303 |
ctggtagcagttcctgctgcactgcagtccacattc |
338 |
Q |
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| T |
46231720 |
ctggtagcagttcctgctgcactgcagtccacattc |
46231685 |
T |
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