View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6464_high_27 (Length: 219)

Name: NF6464_high_27
Description: NF6464
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6464_high_27
NF6464_high_27
[»] chr7 (38 HSPs)
chr7 (82-219)||(3373026-3373163)
chr7 (18-63)||(2103081-2103126)
chr7 (18-63)||(7175992-7176037)
chr7 (18-63)||(7275303-7275348)
chr7 (18-63)||(7799962-7800007)
chr7 (18-63)||(10091214-10091259)
chr7 (18-63)||(21217963-21218008)
chr7 (18-63)||(22119914-22119959)
chr7 (18-63)||(22703512-22703557)
chr7 (18-63)||(23854422-23854467)
chr7 (18-63)||(40543040-40543085)
chr7 (11-63)||(17212079-17212131)
chr7 (17-63)||(19421257-19421303)
chr7 (17-63)||(42913642-42913688)
chr7 (18-63)||(2751297-2751342)
chr7 (18-63)||(11997875-11997920)
chr7 (18-63)||(18044133-18044178)
chr7 (18-63)||(21835177-21835222)
chr7 (18-63)||(22299875-22299920)
chr7 (19-63)||(25333445-25333489)
chr7 (18-63)||(13332553-13332598)
chr7 (18-63)||(27312178-27312223)
chr7 (19-63)||(27009385-27009429)
chr7 (19-63)||(28089842-28089886)
chr7 (18-62)||(31273941-31273985)
chr7 (18-62)||(32849618-32849662)
chr7 (18-61)||(14199796-14199839)
chr7 (17-63)||(27704028-27704074)
chr7 (11-61)||(31713018-31713068)
chr7 (18-63)||(2344325-2344370)
chr7 (18-63)||(23012638-23012683)
chr7 (18-63)||(31197617-31197662)
chr7 (11-56)||(40332132-40332177)
chr7 (23-63)||(28003862-28003902)
chr7 (45-73)||(33440829-33440857)
chr7 (17-57)||(36772431-36772471)
chr7 (18-62)||(39145782-39145826)
chr7 (18-62)||(42814891-42814935)
[»] chr1 (33 HSPs)
chr1 (18-63)||(7578431-7578476)
chr1 (18-66)||(7766857-7766905)
chr1 (11-63)||(8077669-8077721)
chr1 (18-63)||(4621367-4621412)
chr1 (18-63)||(7197376-7197421)
chr1 (18-63)||(24674415-24674460)
chr1 (18-63)||(27454996-27455041)
chr1 (18-63)||(33905640-33905685)
chr1 (11-63)||(9500478-9500530)
chr1 (11-63)||(15059525-15059577)
chr1 (18-62)||(17935792-17935836)
chr1 (18-61)||(46113532-46113575)
chr1 (18-76)||(45859173-45859230)
chr1 (18-63)||(14258557-14258602)
chr1 (18-63)||(24122045-24122090)
chr1 (18-63)||(34778364-34778409)
chr1 (18-62)||(46607833-46607877)
chr1 (18-61)||(36156018-36156061)
chr1 (11-61)||(19034509-19034559)
chr1 (18-59)||(20487320-20487361)
chr1 (18-63)||(23734138-23734183)
chr1 (18-63)||(23741330-23741375)
chr1 (18-63)||(37351591-37351636)
chr1 (17-61)||(8779865-8779909)
chr1 (11-63)||(18646875-18646927)
chr1 (11-62)||(1378768-1378819)
chr1 (11-62)||(1378921-1378972)
chr1 (18-61)||(21726753-21726796)
chr1 (18-61)||(29057467-29057510)
chr1 (18-63)||(1818756-1818801)
chr1 (18-63)||(7946866-7946911)
chr1 (18-62)||(2272367-2272411)
chr1 (18-62)||(23232395-23232439)
[»] scaffold0459 (1 HSPs)
scaffold0459 (11-63)||(10816-10868)
[»] scaffold0366 (2 HSPs)
scaffold0366 (11-63)||(12123-12175)
scaffold0366 (18-63)||(9429-9474)
[»] scaffold0199 (1 HSPs)
scaffold0199 (11-63)||(8530-8582)
[»] chr6 (20 HSPs)
chr6 (11-63)||(11448893-11448945)
chr6 (18-60)||(1344960-1345002)
chr6 (18-63)||(9238997-9239042)
chr6 (18-62)||(654276-654320)
chr6 (9-63)||(11007187-11007241)
chr6 (18-63)||(12591659-12591704)
chr6 (18-59)||(14212918-14212959)
chr6 (18-63)||(15360228-15360273)
chr6 (18-63)||(22576089-22576134)
chr6 (11-63)||(9843960-9844012)
chr6 (11-63)||(13753262-13753314)
chr6 (12-63)||(28968166-28968217)
chr6 (18-63)||(5360201-5360246)
chr6 (18-63)||(21982450-21982495)
chr6 (18-63)||(34147368-34147413)
chr6 (18-63)||(34159984-34160029)
chr6 (18-62)||(17706437-17706481)
chr6 (11-61)||(33718581-33718631)
chr6 (18-63)||(3222765-3222809)
chr6 (18-62)||(28672090-28672134)
[»] chr5 (35 HSPs)
chr5 (11-63)||(15971245-15971297)
chr5 (11-63)||(25586954-25587006)
chr5 (18-63)||(15641235-15641280)
chr5 (18-63)||(22392723-22392768)
chr5 (18-63)||(34049844-34049889)
chr5 (19-63)||(19456340-19456384)
chr5 (18-62)||(38684231-38684275)
chr5 (11-62)||(5067324-5067375)
chr5 (18-61)||(13038584-13038627)
chr5 (18-61)||(18207231-18207274)
chr5 (18-63)||(1827660-1827705)
chr5 (18-63)||(8484791-8484836)
chr5 (18-63)||(12398578-12398623)
chr5 (18-63)||(13108579-13108624)
chr5 (18-63)||(30485850-30485895)
chr5 (18-63)||(32059570-32059615)
chr5 (18-63)||(33709631-33709676)
chr5 (18-63)||(34310164-34310209)
chr5 (18-63)||(37495069-37495114)
chr5 (18-63)||(38631091-38631136)
chr5 (18-62)||(36954841-36954885)
chr5 (18-61)||(11926632-11926675)
chr5 (11-62)||(42193508-42193559)
chr5 (18-63)||(6014410-6014455)
chr5 (18-63)||(7085756-7085801)
chr5 (18-63)||(27498861-27498906)
chr5 (18-63)||(31288076-31288121)
chr5 (18-62)||(10869695-10869739)
chr5 (20-63)||(7151351-7151394)
chr5 (27-62)||(25750750-25750785)
chr5 (17-63)||(23270651-23270697)
chr5 (18-63)||(4603799-4603844)
chr5 (11-56)||(11465030-11465075)
chr5 (18-63)||(28614614-28614659)
chr5 (18-66)||(15931078-15931126)
[»] chr3 (38 HSPs)
chr3 (11-63)||(26174135-26174187)
chr3 (18-63)||(25289844-25289889)
chr3 (18-63)||(25379783-25379828)
chr3 (18-63)||(26108314-26108359)
chr3 (17-62)||(29915398-29915443)
chr3 (17-62)||(29964551-29964596)
chr3 (18-63)||(30807283-30807328)
chr3 (18-63)||(35492933-35492978)
chr3 (11-64)||(39041975-39042028)
chr3 (18-63)||(40940847-40940892)
chr3 (18-63)||(45529884-45529929)
chr3 (18-63)||(46576370-46576415)
chr3 (18-63)||(53424306-53424351)
chr3 (18-62)||(21362966-21363010)
chr3 (7-63)||(34492694-34492750)
chr3 (18-62)||(52821765-52821809)
chr3 (11-63)||(53234033-53234085)
chr3 (11-62)||(38732989-38733040)
chr3 (18-63)||(8456280-8456325)
chr3 (18-63)||(15566629-15566674)
chr3 (18-63)||(30257646-30257691)
chr3 (18-63)||(49258392-49258437)
chr3 (18-59)||(52455779-52455820)
chr3 (18-62)||(7485655-7485699)
chr3 (18-66)||(9853635-9853683)
chr3 (18-62)||(48977411-48977455)
chr3 (18-56)||(1692863-1692901)
chr3 (18-63)||(10083949-10083994)
chr3 (18-63)||(10190872-10190917)
chr3 (18-63)||(40133579-40133624)
chr3 (18-63)||(45272546-45272591)
chr3 (18-62)||(7470345-7470389)
chr3 (18-58)||(19857078-19857118)
chr3 (18-63)||(31537968-31538013)
chr3 (17-57)||(14343417-14343457)
chr3 (18-62)||(18177017-18177061)
chr3 (18-62)||(25344187-25344231)
chr3 (11-63)||(49167078-49167130)
[»] scaffold0019 (1 HSPs)
scaffold0019 (18-69)||(161825-161876)
[»] chr4 (28 HSPs)
chr4 (17-63)||(46714414-46714460)
chr4 (11-61)||(49287882-49287932)
chr4 (18-63)||(1985858-1985903)
chr4 (18-63)||(27528925-27528970)
chr4 (18-63)||(35229190-35229235)
chr4 (11-63)||(19660655-19660707)
chr4 (11-63)||(34844881-34844933)
chr4 (11-63)||(40058975-40059027)
chr4 (11-61)||(33992650-33992700)
chr4 (18-63)||(7392093-7392138)
chr4 (18-63)||(20078114-20078159)
chr4 (18-63)||(22625200-22625245)
chr4 (18-63)||(25852236-25852281)
chr4 (22-63)||(32986219-32986260)
chr4 (22-63)||(33696413-33696454)
chr4 (18-63)||(52983641-52983686)
chr4 (18-62)||(51535636-51535680)
chr4 (11-61)||(51961899-51961949)
chr4 (18-63)||(2351035-2351080)
chr4 (18-63)||(13873425-13873470)
chr4 (18-63)||(36131640-36131685)
chr4 (12-57)||(43719189-43719234)
chr4 (22-63)||(54127476-54127517)
chr4 (11-63)||(5609325-5609377)
chr4 (18-63)||(20566371-20566417)
chr4 (29-63)||(55961883-55961917)
chr4 (18-63)||(35674871-35674916)
chr4 (11-63)||(32942392-32942444)
[»] chr2 (25 HSPs)
chr2 (7-61)||(30466949-30467003)
chr2 (18-63)||(10582120-10582165)
chr2 (18-63)||(27290610-27290655)
chr2 (18-63)||(44946183-44946228)
chr2 (18-61)||(41314016-41314059)
chr2 (22-63)||(11941344-11941385)
chr2 (18-63)||(18976555-18976600)
chr2 (18-63)||(33827703-33827748)
chr2 (18-63)||(34516538-34516583)
chr2 (18-63)||(43374455-43374500)
chr2 (18-63)||(44976284-44976329)
chr2 (18-62)||(25293189-25293233)
chr2 (18-61)||(17324790-17324833)
chr2 (21-63)||(1191535-1191577)
chr2 (18-63)||(5394039-5394084)
chr2 (18-63)||(6714411-6714456)
chr2 (18-59)||(15037985-15038026)
chr2 (18-63)||(36242442-36242487)
chr2 (11-63)||(4567560-4567612)
chr2 (18-62)||(4852581-4852625)
chr2 (18-66)||(8258916-8258964)
chr2 (18-66)||(32845110-32845158)
chr2 (18-54)||(35171831-35171867)
chr2 (22-62)||(40997484-40997524)
chr2 (19-63)||(44610096-44610140)
[»] scaffold0623 (1 HSPs)
scaffold0623 (18-63)||(1186-1231)
[»] chr8 (29 HSPs)
chr8 (18-63)||(14632980-14633025)
chr8 (18-63)||(18532133-18532178)
chr8 (18-63)||(20469943-20469988)
chr8 (18-63)||(28193500-28193545)
chr8 (18-63)||(34237785-34237830)
chr8 (18-63)||(39349282-39349327)
chr8 (11-66)||(7558066-7558121)
chr8 (18-63)||(3734753-3734798)
chr8 (18-63)||(4718671-4718716)
chr8 (18-63)||(19471635-19471680)
chr8 (18-63)||(19542559-19542604)
chr8 (18-63)||(19590092-19590137)
chr8 (18-63)||(21603256-21603301)
chr8 (18-62)||(28088313-28088357)
chr8 (18-62)||(32879306-32879350)
chr8 (18-62)||(42643248-42643292)
chr8 (18-61)||(4698853-4698896)
chr8 (18-61)||(15259536-15259579)
chr8 (18-61)||(27746465-27746508)
chr8 (12-62)||(24018409-24018459)
chr8 (18-63)||(264529-264574)
chr8 (18-63)||(651347-651392)
chr8 (18-63)||(837082-837127)
chr8 (18-63)||(2618212-2618257)
chr8 (19-63)||(8042680-8042724)
chr8 (18-61)||(2166727-2166770)
chr8 (18-63)||(8765656-8765701)
chr8 (18-63)||(20305934-20305979)
chr8 (18-63)||(21092567-21092612)
[»] scaffold0068 (1 HSPs)
scaffold0068 (18-62)||(41774-41818)
[»] scaffold0576 (1 HSPs)
scaffold0576 (18-63)||(5212-5257)
[»] scaffold0217 (1 HSPs)
scaffold0217 (18-63)||(7439-7484)
[»] scaffold0328 (1 HSPs)
scaffold0328 (22-60)||(15016-15054)
[»] scaffold0717 (1 HSPs)
scaffold0717 (18-63)||(88-133)
[»] scaffold0460 (1 HSPs)
scaffold0460 (18-59)||(8309-8350)
[»] scaffold0070 (1 HSPs)
scaffold0070 (18-63)||(40347-40392)
[»] scaffold0051 (1 HSPs)
scaffold0051 (18-63)||(53001-53046)
[»] scaffold0049 (1 HSPs)
scaffold0049 (18-63)||(66784-66829)
[»] scaffold0026 (1 HSPs)
scaffold0026 (18-63)||(97496-97541)
[»] scaffold0240 (1 HSPs)
scaffold0240 (18-62)||(12884-12928)


Alignment Details
Target: chr7 (Bit Score: 126; Significance: 4e-65; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 82 - 219
Target Start/End: Complemental strand, 3373163 - 3373026
Alignment:
Q  82 aaccattcaaatattaaaaaattagtttctccttctccattatgaatgctagtatagtattatataatatctaagtacacaggtcccctaaaaataaata 181  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3373163 aaccattcaaagattcaaaaattagtttctccttctccattatgaatgctagtatagtattatataatatctaagtacacaggtcccctaaaaataaata 3373064  T
Q  182 aatttatgcaacggtcagagtatccctaagaaaaagat 219  Q
    |||||||| |||||||||||||||||||||||||||||    
T  3373063 aatttatgtaacggtcagagtatccctaagaaaaagat 3373026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 2103126 - 2103081
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
T  2103126 aatcgaacctgagacctctggaggagcaaactccaagatcccaagc 2103081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 7175992 - 7176037
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
T  7175992 aatcgaacctgagacctctggaggagcaaactccaagatcccaagc 7176037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 7275348 - 7275303
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
T  7275348 aatcgaacctgagacctctggaggagcaaactccaagatcccaagc 7275303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 7799962 - 7800007
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
T  7799962 aatcgaacctgagacctctggaggagcaaactccaagatcccaagc 7800007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 10091259 - 10091214
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
T  10091259 aatcgaacctgagacctctggaggagcaaactccaagatcccaagc 10091214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 21217963 - 21218008
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
T  21217963 aatcgaacctgagacctctggaggagcaaactccaagatcccaagc 21218008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 22119959 - 22119914
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
T  22119959 aatcgaacctgagacctctggaggagcaaactccaagatcccaagc 22119914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 22703557 - 22703512
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
T  22703557 aatcgaacctgagacctctggaggagcaaactccaagatcccaagc 22703512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 23854467 - 23854422
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
T  23854467 aatcgaacctgagacctctggaggagcaaactccaagatcccaagc 23854422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 40543040 - 40543085
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
T  40543040 aatcgaacctgagacctctggaggagcaaactccaagatcccaagc 40543085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 17212131 - 17212079
Alignment:
Q  11 cagagaaaatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    |||||| ||| ||||||||||||||||||||| ||||||||||||||||||||    
T  17212131 cagagagaattgaacctgagacctctggaggagcaaactccaagatcccaagc 17212079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 63
Target Start/End: Complemental strand, 19421303 - 19421257
Alignment:
Q  17 aaatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||    
T  19421303 aaatcgaacctgagacctctagaggagcaaactccaagatcccaagc 19421257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 63
Target Start/End: Original strand, 42913642 - 42913688
Alignment:
Q  17 aaatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||    
T  42913642 aaatcgaacctgagacctctagaggagcaaactccaagatcccaagc 42913688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 2751342 - 2751297
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||||    
T  2751342 aatcgaacctgagacctttggaggagcaaactccaagatcccaagc 2751297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 11997920 - 11997875
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||||    
T  11997920 aatcgaacctgagacctctagaggagcaaactccaagatcccaagc 11997875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 18044178 - 18044133
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||||    
T  18044178 aatcgaacctgggacctctggaggagcaaactccaagatcccaagc 18044133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 21835222 - 21835177
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    |||||||||||||| |||||||||| ||||||||||||||||||||    
T  21835222 aatcgaacctgagatctctggaggagcaaactccaagatcccaagc 21835177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 22299920 - 22299875
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||    
T  22299920 aatcgaacttgagacctctggaggagcaaactccaagatcccaagc 22299875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 25333489 - 25333445
Alignment:
Q  19 atcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    |||||||||||||||||||||| | ||||||||||||||||||||    
T  25333489 atcgaacctgagacctctggagaagcaaactccaagatcccaagc 25333445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 13332553 - 13332598
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||| |||||||||||| |||||| ||||||||||||||||||||    
T  13332553 aatcgtacctgagacctcaggaggagcaaactccaagatcccaagc 13332598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 27312223 - 27312178
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    |||||||||||| |||||| ||||| ||||||||||||||||||||    
T  27312223 aatcgaacctgaaacctctagaggagcaaactccaagatcccaagc 27312178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 27009429 - 27009385
Alignment:
Q  19 atcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||||||||||||||||| || ||||||||||||||| ||||    
T  27009429 atcgaacctgagacctctggatgagcaaactccaagatccgaagc 27009385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 28089886 - 28089842
Alignment:
Q  19 atcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    |||||||||||||| ||||||||| |||||||||||||| |||||    
T  28089886 atcgaacctgagacatctggaggagcaaactccaagatctcaagc 28089842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 31273985 - 31273941
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaag 62  Q
    |||||||| ||||| |||||||||| |||||||||||||||||||    
T  31273985 aatcgaacttgagagctctggaggagcaaactccaagatcccaag 31273941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 32849662 - 32849618
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaag 62  Q
    |||| |||| ||||||||||||||| |||||||||||||||||||    
T  32849662 aatcaaacccgagacctctggaggagcaaactccaagatcccaag 32849618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 14199796 - 14199839
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaa 61  Q
    |||||||||||||||||||||||||  |||||||||||| ||||    
T  14199796 aatcgaacctgagacctctggaggaggaaactccaagattccaa 14199839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 63
Target Start/End: Complemental strand, 27704074 - 27704028
Alignment:
Q  17 aaatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||||||||||||||||| |||| |||||| ||||||| |||||    
T  27704074 aaatcgaacctgagacctctgtaggagcaaacttcaagatctcaagc 27704028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 31713018 - 31713068
Alignment:
Q  11 cagagaaaatcgaacctgagacctctggaggaacaaactccaagatcccaa 61  Q
    ||||| ||||| | |||||||||||| ||||| ||||||||||||||||||    
T  31713018 cagaggaaatcaatcctgagacctctcgaggagcaaactccaagatcccaa 31713068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 2344370 - 2344325
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||| |||||| || ||||||| ||||||||||||||||||||    
T  2344370 aatcgaatctgagagctttggaggagcaaactccaagatcccaagc 2344325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 23012638 - 23012683
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    |||| ||||| |||||||||||| | ||||||||||||||||||||    
T  23012638 aatcaaacctaagacctctggagaagcaaactccaagatcccaagc 23012683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 31197662 - 31197617
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    |||| |||||||||| |||||| || ||||||||||||||||||||    
T  31197662 aatcaaacctgagacatctggatgagcaaactccaagatcccaagc 31197617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 40332177 - 40332132
Alignment:
Q  11 cagagaaaatcgaacctgagacctctggaggaacaaactccaagat 56  Q
    ||||| |||||||||||||||||| | ||||| |||||||||||||    
T  40332177 cagaggaaatcgaacctgagacctttagaggagcaaactccaagat 40332132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 28003902 - 28003862
Alignment:
Q  23 aacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||| |||| ||||||||| ||||||||||||||||||||    
T  28003902 aacctaagacttctggaggagcaaactccaagatcccaagc 28003862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 73
Target Start/End: Original strand, 33440829 - 33440857
Alignment:
Q  45 aaactccaagatcccaagctaaactccaa 73  Q
    |||||||||||||||||||||||||||||    
T  33440829 aaactccaagatcccaagctaaactccaa 33440857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 57
Target Start/End: Original strand, 36772431 - 36772471
Alignment:
Q  17 aaatcgaacctgagacctctggaggaacaaactccaagatc 57  Q
    ||||| |||||||||||||| ||||| ||||||||||||||    
T  36772431 aaatcaaacctgagacctctagaggagcaaactccaagatc 36772471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 39145782 - 39145826
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaag 62  Q
    |||||||||  |||| ||||||||| |||||||||||||||||||    
T  39145782 aatcgaaccgaagacatctggaggagcaaactccaagatcccaag 39145826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 42814935 - 42814891
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaag 62  Q
    ||||||||||||||| ||  ||||| |||||||||||||||||||    
T  42814935 aatcgaacctgagacttcaagaggagcaaactccaagatcccaag 42814891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 2e-17; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 7578476 - 7578431
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  7578476 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 7578431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 7766857 - 7766905
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagctaa 66  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  7766857 aatcgaacctgagacctctggaggagcaaactccaagatcccaagctaa 7766905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 8077721 - 8077669
Alignment:
Q  11 cagagaaaatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    |||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  8077721 cagagagaatcgaacctgagacctctggaggagcaaactccaagatcccaagc 8077669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 4621367 - 4621412
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
T  4621367 aatcgaacctgagacctctggaggagcaaactccaagatcccaagc 4621412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 7197376 - 7197421
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
T  7197376 aatcgaacctgagacctctggaggagcaaactccaagatcccaagc 7197421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 24674460 - 24674415
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
T  24674460 aatcgaacctgagacctctggaggagcaaactccaagatcccaagc 24674415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 27454996 - 27455041
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
T  27454996 aatcgaacctgagacctctggaggagcaaactccaagatcccaagc 27455041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 33905640 - 33905685
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
T  33905640 aatcgaacctgagacctctggaggagcaaactccaagatcccaagc 33905685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 9500478 - 9500530
Alignment:
Q  11 cagagaaaatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    |||||| |||||||||||||||||||| |||| ||||||||||||||||||||    
T  9500478 cagagagaatcgaacctgagacctctgaaggagcaaactccaagatcccaagc 9500530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 15059525 - 15059577
Alignment:
Q  11 cagagaaaatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    |||||| ||||||||||||||||||||||||| ||||||||||||| ||||||    
T  15059525 cagagagaatcgaacctgagacctctggaggagcaaactccaagattccaagc 15059577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 17935836 - 17935792
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaag 62  Q
    ||||||||||||||||||||||||| |||||||||||||||||||    
T  17935836 aatcgaacctgagacctctggaggagcaaactccaagatcccaag 17935792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 46113532 - 46113575
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaa 61  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  46113532 aatcgaacctgagacctctggaggagcaaactccaagatcccaa 46113575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 45859173 - 45859230
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagctaaactccaaatg 76  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||||  |||||||||||    
T  45859173 aatcgaacctgagacctctagaggagcaaactccaagatcccaagc-caactccaaatg 45859230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 14258557 - 14258602
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||||    
T  14258557 aatcgaaccagagacatctggaggaacaaactccaagatcccaagc 14258602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 24122090 - 24122045
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||    
T  24122090 aatcgaacctgagacctctggaggagcaaaccccaagatcccaagc 24122045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 34778409 - 34778364
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||    
T  34778409 aatcaaacctgagacctctggaggagcaaactccaagatcccaagc 34778364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 46607877 - 46607833
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaag 62  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||    
T  46607877 aatcgaacctgagacctttggaggagcaaactccaagatcccaag 46607833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 36156018 - 36156061
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaa 61  Q
    |||||||||||| |||||||||||| ||||||||||||||||||    
T  36156018 aatcgaacctgacacctctggaggagcaaactccaagatcccaa 36156061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 19034509 - 19034559
Alignment:
Q  11 cagagaaaatcgaacctgagacctctggaggaacaaactccaagatcccaa 61  Q
    |||||| |||||||||||| |||| | ||||||||||||||||||||||||    
T  19034509 cagagataatcgaacctgaaaccttttgaggaacaaactccaagatcccaa 19034559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 59
Target Start/End: Original strand, 20487320 - 20487361
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatccc 59  Q
    |||||||| |||||||||||||||| ||||||||||||||||    
T  20487320 aatcgaacttgagacctctggaggagcaaactccaagatccc 20487361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 23734183 - 23734138
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||||||||||||||||||||| |||| || ||||||||||||    
T  23734183 aatcgaacctgagacctctggaggagcaaattctaagatcccaagc 23734138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 23741375 - 23741330
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||||||||||||||||||||| |||| || ||||||||||||    
T  23741375 aatcgaacctgagacctctggaggagcaaattctaagatcccaagc 23741330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 37351591 - 37351636
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||||||||||| | ||||||| ||||||||||||||||||||    
T  37351591 aatcgaacctgagacatttggaggagcaaactccaagatcccaagc 37351636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 8779865 - 8779909
Alignment:
Q  17 aaatcgaacctgagacctctggaggaacaaactccaagatcccaa 61  Q
    |||||||| ||||||||||||||| | ||||||||||||||||||    
T  8779865 aaatcgaagctgagacctctggagaagcaaactccaagatcccaa 8779909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 18646927 - 18646875
Alignment:
Q  11 cagagaaaatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    |||||| ||||||||||||||||||||||| | ||||||| |||||| |||||    
T  18646927 cagagagaatcgaacctgagacctctggagaagcaaactcaaagatcacaagc 18646875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 1378819 - 1378768
Alignment:
Q  11 cagagaaaatcgaacctgagacctctggaggaacaaactccaagatcccaag 62  Q
    ||||||||||||||| |||||||| |||||||  |||||||||||| |||||    
T  1378819 cagagaaaatcgaacatgagacctttggaggagtaaactccaagattccaag 1378768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 1378972 - 1378921
Alignment:
Q  11 cagagaaaatcgaacctgagacctctggaggaacaaactccaagatcccaag 62  Q
    ||||| ||||||||| |||||| | ||||||| |||||||||||||||||||    
T  1378972 cagaggaaatcgaacatgagacttttggaggagcaaactccaagatcccaag 1378921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 21726796 - 21726753
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaa 61  Q
    ||||||||||||||||||||||||| |||||| ||||| |||||    
T  21726796 aatcgaacctgagacctctggaggagcaaacttcaagaacccaa 21726753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 29057467 - 29057510
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaa 61  Q
    ||||||||||||||||| ||||| | ||||||||||||||||||    
T  29057467 aatcgaacctgagacctttggagcagcaaactccaagatcccaa 29057510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 1818801 - 1818756
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    |||||||||||| ||||||||| || ||||||||||||||| ||||    
T  1818801 aatcgaacctgaaacctctggaagagcaaactccaagatcctaagc 1818756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 7946911 - 7946866
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    |||||||| |||||||||||||||| |||||| ||||||| |||||    
T  7946911 aatcgaacttgagacctctggaggagcaaacttcaagatctcaagc 7946866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 2272411 - 2272367
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaag 62  Q
    |||| ||||||||||||||| |||| ||||||| |||||||||||    
T  2272411 aatcaaacctgagacctctgtaggagcaaactctaagatcccaag 2272367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 23232395 - 23232439
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaag 62  Q
    |||||||||||| ||||||||| || |||||| ||||||||||||    
T  23232395 aatcgaacctgaaacctctggaagagcaaacttcaagatcccaag 23232439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 10816 - 10868
Alignment:
Q  11 cagagaaaatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  10816 cagaggaaatcgaacctgagacctctggaggagcaaactccaagatcccaagc 10868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 45; Significance: 8e-17; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 12123 - 12175
Alignment:
Q  11 cagagaaaatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  12123 cagaggaaatcgaacctgagacctctggaggagcaaactccaagatcccaagc 12175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 9429 - 9474
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
T  9429 aatcgaacctgagacctctggaggagcaaactccaagatcccaagc 9474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 8530 - 8582
Alignment:
Q  11 cagagaaaatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    |||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  8530 cagagataatcgaacctgagacctctggaggagcaaactccaagatcccaagc 8582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 8e-17; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 11448945 - 11448893
Alignment:
Q  11 cagagaaaatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    |||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  11448945 cagagagaatcgaacctgagacctctggaggagcaaactccaagatcccaagc 11448893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 1345002 - 1344960
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatccca 60  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  1345002 aatcgaacctgagacctctggaggaacaaactccaagatccca 1344960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 9239042 - 9238997
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
T  9239042 aatcgaacctgagacctctggaggagcaaactccaagatcccaagc 9238997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 654276 - 654320
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaag 62  Q
    ||||||||||||||||||||||||| |||||||||||||||||||    
T  654276 aatcgaacctgagacctctggaggagcaaactccaagatcccaag 654320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 11007241 - 11007187
Alignment:
Q  9 agcagagaaaatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    |||||||  ||||||||||||||||| ||||||| ||||||||||||||||||||    
T  11007241 agcagagtgaatcgaacctgagacctttggaggagcaaactccaagatcccaagc 11007187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 12591704 - 12591659
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||||    
T  12591704 aatcgaacctgagacctttggaggagcaaactccaagatcccaagc 12591659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 59
Target Start/End: Complemental strand, 14212959 - 14212918
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatccc 59  Q
    ||||||||||||||||||||||||| ||||||||||||||||    
T  14212959 aatcgaacctgagacctctggaggagcaaactccaagatccc 14212918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 15360228 - 15360273
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||||    
T  15360228 aatcgaacctgagacctttggaggagcaaactccaagatcccaagc 15360273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 22576134 - 22576089
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||||    
T  22576134 aatcgaatctgagacctctggaggagcaaactccaagatcccaagc 22576089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 9844012 - 9843960
Alignment:
Q  11 cagagaaaatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||| || ||||||||||||||||| ||||| ||||||||||||||||||||    
T  9844012 cagaggaagtcgaacctgagacctctagaggagcaaactccaagatcccaagc 9843960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 13753314 - 13753262
Alignment:
Q  11 cagagaaaatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    |||||| ||| ||||||||||||||||||||| ||||||||||||||| ||||    
T  13753314 cagagagaattgaacctgagacctctggaggagcaaactccaagatccaaagc 13753262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 63
Target Start/End: Original strand, 28968166 - 28968217
Alignment:
Q  12 agagaaaatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||| ||||||| ||||||||||| ||||| ||||||||||||||||||||    
T  28968166 agagagaatcgaatctgagacctctagaggagcaaactccaagatcccaagc 28968217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 5360201 - 5360246
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||||||||||||||| ||| | ||||||||||||||||||||    
T  5360201 aatcgaacctgagacctcttgagaagcaaactccaagatcccaagc 5360246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 21982450 - 21982495
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    |||||||||| |||||||||||||| |||||| |||||||||||||    
T  21982450 aatcgaacctcagacctctggaggagcaaacttcaagatcccaagc 21982495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 34147413 - 34147368
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||||||||||| |||||| || ||||||||||||||||||||    
T  34147413 aatcgaacctgagacttctggaagagcaaactccaagatcccaagc 34147368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 34160029 - 34159984
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||||||||||| |||||| || ||||||||||||||||||||    
T  34160029 aatcgaacctgagacttctggaagagcaaactccaagatcccaagc 34159984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 17706437 - 17706481
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaag 62  Q
    |||||||| |||||| ||||||||| |||||||||||||||||||    
T  17706437 aatcgaacttgagacttctggaggagcaaactccaagatcccaag 17706481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 33718581 - 33718631
Alignment:
Q  11 cagagaaaatcgaacctgagacctctggaggaacaaactccaagatcccaa 61  Q
    |||||| |||||||||||||| |||||||| |  |||||||||||||||||    
T  33718581 cagagagaatcgaacctgagatctctggagaagtaaactccaagatcccaa 33718631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 3222765 - 3222809
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||||||||||||||| ||||| |||||| |||||||||||||    
T  3222765 aatcgaacctgagacctct-gaggagcaaactgcaagatcccaagc 3222809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 28672134 - 28672090
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaag 62  Q
    |||||||||| |||||||| ||||| |||||||||||||| ||||    
T  28672134 aatcgaacctaagacctctagaggagcaaactccaagatctcaag 28672090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 8e-17; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 15971245 - 15971297
Alignment:
Q  11 cagagaaaatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  15971245 cagaggaaatcgaacctgagacctctggaggagcaaactccaagatcccaagc 15971297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 25587006 - 25586954
Alignment:
Q  11 cagagaaaatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  25587006 cagaggaaatcgaacctgagacctctggaggagcaaactccaagatcccaagc 25586954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 15641235 - 15641280
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
T  15641235 aatcgaacctgagacctctggaggagcaaactccaagatcccaagc 15641280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 22392768 - 22392723
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
T  22392768 aatcgaacctgagacctctggaggagcaaactccaagatcccaagc 22392723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 34049889 - 34049844
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
T  34049889 aatcgaacctgagacctctggaggagcaaactccaagatcccaagc 34049844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 19456340 - 19456384
Alignment:
Q  19 atcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  19456340 atcgaacctgagacctctggaggagcaaactccaagatcccaagc 19456384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 38684275 - 38684231
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaag 62  Q
    ||||||||||||||||||||||||| |||||||||||||||||||    
T  38684275 aatcgaacctgagacctctggaggagcaaactccaagatcccaag 38684231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 5067375 - 5067324
Alignment:
Q  11 cagagaaaatcgaacctgagacctctggaggaacaaactccaagatcccaag 62  Q
    ||||||||||||||||||||| |||||||||| ||||||| |||||||||||    
T  5067375 cagagaaaatcgaacctgagatctctggaggagcaaactcgaagatcccaag 5067324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 13038584 - 13038627
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaa 61  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  13038584 aatcgaacctgagacctctggaggagcaaactccaagatcccaa 13038627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 18207274 - 18207231
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaa 61  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  18207274 aatcgaacctgagacctctggaggagcaaactccaagatcccaa 18207231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 1827660 - 1827705
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||    
T  1827660 aatcgaacctgagacctctggaggagcaaactccaagatctcaagc 1827705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 8484791 - 8484836
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||    
T  8484791 aatcaaacctgagacctctggaggagcaaactccaagatcccaagc 8484836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 12398578 - 12398623
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||||    
T  12398578 aatcgaacctgagacctttggaggagcaaactccaagatcccaagc 12398623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 13108579 - 13108624
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    |||||||||||||| |||||||||| ||||||||||||||||||||    
T  13108579 aatcgaacctgagatctctggaggagcaaactccaagatcccaagc 13108624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 30485895 - 30485850
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||    
T  30485895 aatcgaacctgagacctctgaaggagcaaactccaagatcccaagc 30485850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 32059570 - 32059615
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||||    
T  32059570 aatcgaacctgagacctttggaggagcaaactccaagatcccaagc 32059615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 33709631 - 33709676
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||    
T  33709631 aatcgaacttgagacctctggaggagcaaactccaagatcccaagc 33709676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 34310209 - 34310164
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||    
T  34310209 aatcgaacctgagacctctggaggagcaaactccaagattccaagc 34310164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 37495114 - 37495069
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||    
T  37495114 aatcgaacctgagacctctggaggagcaaactccaagatctcaagc 37495069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 38631091 - 38631136
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||||    
T  38631091 aatcgaatctgagacctctggaggagcaaactccaagatcccaagc 38631136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 36954885 - 36954841
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaag 62  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||    
T  36954885 aatcgaacctgagacctctagaggagcaaactccaagatcccaag 36954841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 11926632 - 11926675
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaa 61  Q
    |||| |||||||||||||||||||| ||||||||||||||||||    
T  11926632 aatctaacctgagacctctggaggagcaaactccaagatcccaa 11926675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 42193559 - 42193508
Alignment:
Q  11 cagagaaaatcgaacctgagacctctggaggaacaaactccaagatcccaag 62  Q
    ||||| |||||||||||||||||||||| | | |||||||||||||||||||    
T  42193559 cagaggaaatcgaacctgagacctctggggaagcaaactccaagatcccaag 42193508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 6014410 - 6014455
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    |||||||||||||| |||||||| | ||||||||||||||||||||    
T  6014410 aatcgaacctgagatctctggagaagcaaactccaagatcccaagc 6014455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 7085756 - 7085801
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||||| |||||||||||||||  |||||||||||||||||||    
T  7085756 aatcgaaccggagacctctggaggagaaaactccaagatcccaagc 7085801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 27498861 - 27498906
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||||||||||||||| ||||| ||||||||||||| ||||||    
T  27498861 aatcgaacctgagacctctagaggagcaaactccaagattccaagc 27498906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 31288076 - 31288121
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    |||||||| |||||||| ||||||| ||||||||||||||||||||    
T  31288076 aatcgaacatgagacctttggaggagcaaactccaagatcccaagc 31288121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 10869695 - 10869739
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaag 62  Q
    ||||||||||||||||| ||||||| |||||||||||||| ||||    
T  10869695 aatcgaacctgagacctttggaggagcaaactccaagatcgcaag 10869739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 7151394 - 7151351
Alignment:
Q  20 tcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    |||||||| |||||||| ||||| ||||||||||||||||||||    
T  7151394 tcgaacctaagacctcttgaggagcaaactccaagatcccaagc 7151351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 62
Target Start/End: Original strand, 25750750 - 25750785
Alignment:
Q  27 tgagacctctggaggaacaaactccaagatcccaag 62  Q
    |||||||||||||||| |||||||||||||||||||    
T  25750750 tgagacctctggaggagcaaactccaagatcccaag 25750785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 63
Target Start/End: Original strand, 23270651 - 23270697
Alignment:
Q  17 aaatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||||| |||||||| |||| || ||||||||||||||||||||    
T  23270651 aaatcgaacttgagacctttggatgagcaaactccaagatcccaagc 23270697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 4603844 - 4603799
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    |||||||| ||||| || ||||||| ||||||||||||||||||||    
T  4603844 aatcgaacttgagatctttggaggagcaaactccaagatcccaagc 4603799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 11465030 - 11465075
Alignment:
Q  11 cagagaaaatcgaacctgagacctctggaggaacaaactccaagat 56  Q
    ||||| |||||||||||||||| | ||||||| |||||||||||||    
T  11465030 cagaggaaatcgaacctgagacatttggaggagcaaactccaagat 11465075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 28614614 - 28614659
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    |||||||||||||| || ||||||||||||||| |||||| |||||    
T  28614614 aatcgaacctgagatctttggaggaacaaactctaagatctcaagc 28614659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 15931126 - 15931078
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagctaa 66  Q
    ||||||||||||||| | || || | |||||||||||||||||||||||    
T  15931126 aatcgaacctgagacttgtgaagaagcaaactccaagatcccaagctaa 15931078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 8e-17; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 26174187 - 26174135
Alignment:
Q  11 cagagaaaatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  26174187 cagaggaaatcgaacctgagacctctggaggagcaaactccaagatcccaagc 26174135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 25289844 - 25289889
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
T  25289844 aatcgaacctgagacctctggaggagcaaactccaagatcccaagc 25289889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 25379828 - 25379783
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
T  25379828 aatcgaacctgagacctctggaggagcaaactccaagatcccaagc 25379783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 26108359 - 26108314
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
T  26108359 aatcgaacctgagacctctggaggagcaaactccaagatcccaagc 26108314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 29915398 - 29915443
Alignment:
Q  17 aaatcgaacctgagacctctggaggaacaaactccaagatcccaag 62  Q
    |||||||||||||||||||||||||| |||||||||||||||||||    
T  29915398 aaatcgaacctgagacctctggaggagcaaactccaagatcccaag 29915443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 29964551 - 29964596
Alignment:
Q  17 aaatcgaacctgagacctctggaggaacaaactccaagatcccaag 62  Q
    |||||||||||||||||||||||||| |||||||||||||||||||    
T  29964551 aaatcgaacctgagacctctggaggagcaaactccaagatcccaag 29964596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 30807283 - 30807328
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
T  30807283 aatcgaacctgagacctctggaggagcaaactccaagatcccaagc 30807328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 35492978 - 35492933
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
T  35492978 aatcgaacctgagacctctggaggagcaaactccaagatcccaagc 35492933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 64
Target Start/End: Original strand, 39041975 - 39042028
Alignment:
Q  11 cagagaaaatcgaacctgagacctctggaggaacaaactccaagatcccaagct 64  Q
    |||||| |||||||| |||||||||||||||| |||||||||||||||||||||    
T  39041975 cagagagaatcgaacttgagacctctggaggagcaaactccaagatcccaagct 39042028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 40940892 - 40940847
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
T  40940892 aatcgaacctgagacctctggaggagcaaactccaagatcccaagc 40940847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 45529884 - 45529929
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
T  45529884 aatcgaacctgagacctctggaggagcaaactccaagatcccaagc 45529929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 46576415 - 46576370
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
T  46576415 aatcgaacctgagacctctggaggagcaaactccaagatcccaagc 46576370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 53424306 - 53424351
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
T  53424306 aatcgaacctgagacctctggaggagcaaactccaagatcccaagc 53424351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 21363010 - 21362966
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaag 62  Q
    ||||||||||||||||||||||||| |||||||||||||||||||    
T  21363010 aatcgaacctgagacctctggaggagcaaactccaagatcccaag 21362966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 34492694 - 34492750
Alignment:
Q  7 gcagcagagaaaatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    |||||||||  |||||||| |||||||||||||||| ||||||||||||||||||||    
T  34492694 gcagcagagggaatcgaacatgagacctctggaggagcaaactccaagatcccaagc 34492750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 52821765 - 52821809
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaag 62  Q
    ||||||||||||||||||||||||| |||||||||||||||||||    
T  52821765 aatcgaacctgagacctctggaggagcaaactccaagatcccaag 52821809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 53234033 - 53234085
Alignment:
Q  11 cagagaaaatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    |||||| ||||||||||||||| ||||||||| ||||||||||||||||||||    
T  53234033 cagagagaatcgaacctgagacttctggaggagcaaactccaagatcccaagc 53234085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 38733040 - 38732989
Alignment:
Q  11 cagagaaaatcgaacctgagacctctggaggaacaaactccaagatcccaag 62  Q
    |||||| ||||| ||||||||||||||||||||||||||||||||| |||||    
T  38733040 cagagagaatcggacctgagacctctggaggaacaaactccaagattccaag 38732989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 8456280 - 8456325
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||    
T  8456280 aatcgaacctgagacctctggaggagcaaactcgaagatcccaagc 8456325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 15566629 - 15566674
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||    
T  15566629 aatcgaacctgagacctctggaggagcaaactccaagatctcaagc 15566674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 30257691 - 30257646
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||||    
T  30257691 aatcgaacctgagacctttggaggagcaaactccaagatcccaagc 30257646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 49258392 - 49258437
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||||||||||||||||||||| |||||| |||||||||||||    
T  49258392 aatcgaacctgagacctctggaggagcaaactgcaagatcccaagc 49258437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 59
Target Start/End: Original strand, 52455779 - 52455820
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatccc 59  Q
    ||||||||||||||||||||||||| ||||||||||||||||    
T  52455779 aatcgaacctgagacctctggaggagcaaactccaagatccc 52455820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 7485655 - 7485699
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaag 62  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||    
T  7485655 aatcgaacctgagacctttggaggagcaaactccaagatcccaag 7485699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 9853683 - 9853635
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagctaa 66  Q
    ||||||||||||||||| ||||||| |||||||||||||||||| ||||    
T  9853683 aatcgaacctgagacctttggaggagcaaactccaagatcccaaactaa 9853635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 48977455 - 48977411
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaag 62  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||    
T  48977455 aatcgaacctgagacctttggaggagcaaactccaagatcccaag 48977411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 56
Target Start/End: Complemental strand, 1692901 - 1692863
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagat 56  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  1692901 aatcgaacctgagacctctggaggagcaaactccaagat 1692863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 10083949 - 10083994
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    |||| |||||||| ||||||||||| ||||||||||||||||||||    
T  10083949 aatcaaacctgagccctctggaggagcaaactccaagatcccaagc 10083994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 10190872 - 10190917
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    |||| |||||||| ||||||||||| ||||||||||||||||||||    
T  10190872 aatcaaacctgagccctctggaggagcaaactccaagatcccaagc 10190917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 40133579 - 40133624
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||||||||||||| ||||||| |||||||||| |||||||||    
T  40133579 aatcgaacctgagacctttggaggagcaaactccaaaatcccaagc 40133624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 45272546 - 45272591
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||| ||||||| ||||||||| ||||||||||||||||||||    
T  45272546 aatcgaaactgagacatctggaggagcaaactccaagatcccaagc 45272591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 7470345 - 7470389
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaag 62  Q
    ||||||||||||||||| ||||||| |||||||||||||| ||||    
T  7470345 aatcgaacctgagacctttggaggagcaaactccaagatctcaag 7470389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 19857118 - 19857078
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcc 58  Q
    ||||||||||||||| ||||||||| |||||||||||||||    
T  19857118 aatcgaacctgagacatctggaggagcaaactccaagatcc 19857078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 31537968 - 31538013
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    |||| ||| |||||||||||||||| ||||||||||||||| ||||    
T  31537968 aatcaaacatgagacctctggaggagcaaactccaagatcctaagc 31538013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 57
Target Start/End: Original strand, 14343417 - 14343457
Alignment:
Q  17 aaatcgaacctgagacctctggaggaacaaactccaagatc 57  Q
    |||||||| ||||||| ||||||||| ||||||||||||||    
T  14343417 aaatcgaatctgagacatctggaggagcaaactccaagatc 14343457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 18177017 - 18177061
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaag 62  Q
    |||||||||||| ||||||||| || |||||||||||||| ||||    
T  18177017 aatcgaacctgatacctctggaagagcaaactccaagatctcaag 18177061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 25344187 - 25344231
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaag 62  Q
    |||| ||||||||| |||||||||| ||||||| |||||||||||    
T  25344187 aatcaaacctgagatctctggaggagcaaactcgaagatcccaag 25344231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 49167130 - 49167078
Alignment:
Q  11 cagagaaaatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    |||||| |||||||||||| | || ||||||| |||||||||||||| |||||    
T  49167130 cagagagaatcgaacctgatatctttggaggagcaaactccaagatctcaagc 49167078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 161876 - 161825
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagctaaact 69  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  161876 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaact 161825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 63
Target Start/End: Complemental strand, 46714460 - 46714414
Alignment:
Q  17 aaatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||    
T  46714460 aaatcgaacctgagacctctggaggagcaaactccaagatcccaagc 46714414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 49287932 - 49287882
Alignment:
Q  11 cagagaaaatcgaacctgagacctctggaggaacaaactccaagatcccaa 61  Q
    |||||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  49287932 cagagagaatcgaacctgagacctctggaggagcaaactccaagatcccaa 49287882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 1985903 - 1985858
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
T  1985903 aatcgaacctgagacctctggaggagcaaactccaagatcccaagc 1985858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 27528925 - 27528970
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
T  27528925 aatcgaacctgagacctctggaggagcaaactccaagatcccaagc 27528970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 35229235 - 35229190
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
T  35229235 aatcgaacctgagacctctggaggagcaaactccaagatcccaagc 35229190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 19660655 - 19660707
Alignment:
Q  11 cagagaaaatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    |||||| |||| |||||||||||||||||||| ||||||||||||||||||||    
T  19660655 cagagagaatcaaacctgagacctctggaggagcaaactccaagatcccaagc 19660707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 34844881 - 34844933
Alignment:
Q  11 cagagaaaatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    |||||| ||||||||||||||||||||||||| |||||||||||||| |||||    
T  34844881 cagagagaatcgaacctgagacctctggaggagcaaactccaagatctcaagc 34844933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 40058975 - 40059027
Alignment:
Q  11 cagagaaaatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    |||||| ||||||||||||||||||| ||||| ||||||||||||||||||||    
T  40058975 cagagagaatcgaacctgagacctctagaggagcaaactccaagatcccaagc 40059027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 33992700 - 33992650
Alignment:
Q  11 cagagaaaatcgaacctgagacctctggaggaacaaactccaagatcccaa 61  Q
    |||||| |||||||||| |||||||||||||| ||||||||||||||||||    
T  33992700 cagagagaatcgaacctaagacctctggaggagcaaactccaagatcccaa 33992650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 7392093 - 7392138
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||||    
T  7392093 aatcgaacctgagacctttggaggagcaaactccaagatcccaagc 7392138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 20078114 - 20078159
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||    
T  20078114 aatcaaacctgagacctctggaggagcaaactccaagatcccaagc 20078159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 22625200 - 22625245
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    |||||||||||||||||||||||||  |||||||||||||||||||    
T  22625200 aatcgaacctgagacctctggaggagtaaactccaagatcccaagc 22625245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 25852281 - 25852236
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||||    
T  25852281 aatcgaacctgagacctttggaggagcaaactccaagatcccaagc 25852236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 63
Target Start/End: Complemental strand, 32986260 - 32986219
Alignment:
Q  22 gaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||||||||||||||||| ||||||||||||||||||||    
T  32986260 gaacctgagacctctggaggagcaaactccaagatcccaagc 32986219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 63
Target Start/End: Original strand, 33696413 - 33696454
Alignment:
Q  22 gaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||||||||||||||||| ||||||||||||||||||||    
T  33696413 gaacctgagacctctggaggagcaaactccaagatcccaagc 33696454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 52983686 - 52983641
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||    
T  52983686 aatcgaacctgagacctctggaggagcaaactccaagatctcaagc 52983641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 51535680 - 51535636
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaag 62  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||    
T  51535680 aatcgaacctgagacctgtggaggagcaaactccaagatcccaag 51535636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 51961949 - 51961899
Alignment:
Q  11 cagagaaaatcgaacctgagacctctggaggaacaaactccaagatcccaa 61  Q
    ||||||||||||||||||| | ||||||| ||||||| |||||||||||||    
T  51961949 cagagaaaatcgaacctgaaatctctggaagaacaaattccaagatcccaa 51961899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 2351080 - 2351035
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||||||||||||||||||||| |||||| |||||| ||||||    
T  2351080 aatcgaacctgagacctctggaggagcaaacttcaagattccaagc 2351035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 13873425 - 13873470
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||||||||||||| || |||| ||||||||||||||||||||    
T  13873425 aatcgaacctgagacctttgaaggagcaaactccaagatcccaagc 13873470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 36131640 - 36131685
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||||||||||| ||||||||||| |||||||| |||||||||    
T  36131640 aatcgaacctgagacatctggaggaacgaactccaaaatcccaagc 36131685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 43719189 - 43719234
Alignment:
Q  12 agagaaaatcgaacctgagacctctggaggaacaaactccaagatc 57  Q
    ||||| |||||||||||| |||||||||||| ||||||||||||||    
T  43719189 agagagaatcgaacctgaaacctctggaggagcaaactccaagatc 43719234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 63
Target Start/End: Original strand, 54127476 - 54127517
Alignment:
Q  22 gaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||||||||| ||||||| ||||||||||||||||||||    
T  54127476 gaacctgagacctttggaggagcaaactccaagatcccaagc 54127517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 5609325 - 5609377
Alignment:
Q  11 cagagaaaatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    |||||| |||||||||||||||| ||| | || ||||||||||||||||||||    
T  5609325 cagagagaatcgaacctgagaccactgaatgagcaaactccaagatcccaagc 5609377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 20566417 - 20566371
Alignment:
Q  18 aatcgaacctgag-acctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||||||||  |||||||||||| ||||||||||||||||||||    
T  20566417 aatcgaacctgatcacctctggaggagcaaactccaagatcccaagc 20566371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 63
Target Start/End: Original strand, 55961883 - 55961917
Alignment:
Q  29 agacctctggaggaacaaactccaagatcccaagc 63  Q
    |||||||||||||| ||||||||||||||||||||    
T  55961883 agacctctggaggagcaaactccaagatcccaagc 55961917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 35674871 - 35674916
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||||||| ||||| |||| || ||||||||||||||||||||    
T  35674871 aatcgaacctgtgacctttggaagagcaaactccaagatcccaagc 35674916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 32942444 - 32942392
Alignment:
Q  11 cagagaaaatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    |||||| |||||||||| | ||||||||||||  ||||||||||||| |||||    
T  32942444 cagagagaatcgaaccttaaacctctggaggagtaaactccaagatctcaagc 32942392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 30466949 - 30467003
Alignment:
Q  7 gcagcagagaaaatcgaacctgagacctctggaggaacaaactccaagatcccaa 61  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||| |||||||    
T  30466949 gcagcagagagaatcgaacctgagacctctagaggaacaaactccaatatcccaa 30467003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 10582120 - 10582165
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
T  10582120 aatcgaacctgagacctctggaggagcaaactccaagatcccaagc 10582165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 27290655 - 27290610
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
T  27290655 aatcgaacctgagacctctggaggagcaaactccaagatcccaagc 27290610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 44946183 - 44946228
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
T  44946183 aatcgaacctgagacctctggaggagcaaactccaagatcccaagc 44946228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 41314059 - 41314016
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaa 61  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  41314059 aatcgaacctgagacctctggaggagcaaactccaagatcccaa 41314016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 63
Target Start/End: Original strand, 11941344 - 11941385
Alignment:
Q  22 gaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||||||||||||||||| ||||||||||||||||||||    
T  11941344 gaacctgagacctctggaggagcaaactccaagatcccaagc 11941385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 18976555 - 18976600
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||    
T  18976555 aatcgaacatgagacctctggaggagcaaactccaagatcccaagc 18976600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 33827703 - 33827748
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||    
T  33827703 aatcgaacctgagacctctggaggagcaatctccaagatcccaagc 33827748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 34516538 - 34516583
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    |||||||||||| |||||||||||| ||||||||||||||||||||    
T  34516538 aatcgaacctgaaacctctggaggagcaaactccaagatcccaagc 34516583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 43374455 - 43374500
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||    
T  43374455 aatcgaacctgagacctctgaaggagcaaactccaagatcccaagc 43374500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 44976284 - 44976329
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||    
T  44976284 aatcgaacctgagacctctggaggagcaaaccccaagatcccaagc 44976329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 25293233 - 25293189
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaag 62  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||    
T  25293233 aatcgaacctgagacctctcgaggagcaaactccaagatcccaag 25293189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 17324833 - 17324790
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaa 61  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||    
T  17324833 aatcgaacctgagacctctggaggagcaaactccaagataccaa 17324790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 21 - 63
Target Start/End: Complemental strand, 1191577 - 1191535
Alignment:
Q  21 cgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    |||||||||||||||||||||| |||||||||||||| |||||    
T  1191577 cgaacctgagacctctggaggagcaaactccaagatctcaagc 1191535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 5394084 - 5394039
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||||||||||||| ||||||| |||||||||||||| |||||    
T  5394084 aatcgaacctgagacctttggaggagcaaactccaagatctcaagc 5394039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 6714411 - 6714456
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    |||| |||||||||||||||||||| |||||||||||||| |||||    
T  6714411 aatcaaacctgagacctctggaggagcaaactccaagatctcaagc 6714456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 59
Target Start/End: Complemental strand, 15038026 - 15037985
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatccc 59  Q
    ||||||||||||||||| ||||||| ||||||||||||||||    
T  15038026 aatcgaacctgagacctttggaggagcaaactccaagatccc 15037985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 36242442 - 36242487
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||||||||||||||||||||| |||| | |||||||||||||    
T  36242442 aatcgaacctgagacctctggaggagcaaatttcaagatcccaagc 36242487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 4567560 - 4567612
Alignment:
Q  11 cagagaaaatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||| |||||||||||||||| |||| |||| |||||| |||||||||||||    
T  4567560 cagaggaaatcgaacctgagacttctgaaggagcaaacttcaagatcccaagc 4567612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 4852625 - 4852581
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaag 62  Q
    ||||||||||||||||| ||||||| ||||||||||||| |||||    
T  4852625 aatcgaacctgagacctttggaggagcaaactccaagattccaag 4852581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 8258964 - 8258916
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagctaa 66  Q
    ||||||||||||||| ||||||||| |||||||||||||| ||| ||||    
T  8258964 aatcgaacctgagacatctggaggagcaaactccaagatctcaaactaa 8258916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 32845158 - 32845110
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagctaa 66  Q
    |||||||||||| || | ||||||| |||||||||||||||||||||||    
T  32845158 aatcgaacctgaaacttttggaggagcaaactccaagatcccaagctaa 32845110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 54
Target Start/End: Complemental strand, 35171867 - 35171831
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaag 54  Q
    ||||||||||||||||||||||||| |||||||||||    
T  35171867 aatcgaacctgagacctctggaggagcaaactccaag 35171831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 40997484 - 40997524
Alignment:
Q  22 gaacctgagacctctggaggaacaaactccaagatcccaag 62  Q
    |||| |||||||| ||||||| |||||||||||||||||||    
T  40997484 gaacatgagacctttggaggagcaaactccaagatcccaag 40997524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 44610140 - 44610096
Alignment:
Q  19 atcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    |||||||||||||||| |||| || |||||||||||||| |||||    
T  44610140 atcgaacctgagacctttggaagagcaaactccaagatctcaagc 44610096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0623 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 1186 - 1231
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
T  1186 aatcgaacctgagacctctggaggagcaaactccaagatcccaagc 1231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 14633025 - 14632980
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
T  14633025 aatcgaacctgagacctctggaggagcaaactccaagatcccaagc 14632980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 18532178 - 18532133
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
T  18532178 aatcgaacctgagacctctggaggagcaaactccaagatcccaagc 18532133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 20469988 - 20469943
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
T  20469988 aatcgaacctgagacctctggaggagcaaactccaagatcccaagc 20469943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 28193545 - 28193500
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
T  28193545 aatcgaacctgagacctctggaggagcaaactccaagatcccaagc 28193500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 34237785 - 34237830
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
T  34237785 aatcgaacctgagacctctggaggagcaaactccaagatcccaagc 34237830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 39349327 - 39349282
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
T  39349327 aatcgaacctgagacctctggaggagcaaactccaagatcccaagc 39349282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 11 - 66
Target Start/End: Original strand, 7558066 - 7558121
Alignment:
Q  11 cagagaaaatcgaacctgagacctctggaggaacaaactccaagatcccaagctaa 66  Q
    ||||| |||||||| ||||||| ||||||||| |||||||||||||||||||||||    
T  7558066 cagaggaaatcgaatctgagacttctggaggagcaaactccaagatcccaagctaa 7558121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 3734753 - 3734798
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||||    
T  3734753 aatcgaacctgagacctttggaggagcaaactccaagatcccaagc 3734798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 4718716 - 4718671
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||    
T  4718716 aatcgaacctgagacctctgaaggagcaaactccaagatcccaagc 4718671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 19471680 - 19471635
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||    
T  19471680 aatcaaacctgagacctctggaggagcaaactccaagatcccaagc 19471635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 19542604 - 19542559
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||    
T  19542604 aatcaaacctgagacctctggaggagcaaactccaagatcccaagc 19542559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 19590092 - 19590137
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||    
T  19590092 aatcaaacctgagacctctggaggagcaaactccaagatcccaagc 19590137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 21603301 - 21603256
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||    
T  21603301 aatcgaacctgagacctctggaggagcaaactctaagatcccaagc 21603256  T

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Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 28088357 - 28088313
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaag 62  Q
    ||||||| |||||||||||||| ||||||||||||||||||||||    
T  28088357 aatcgaatctgagacctctggatgaacaaactccaagatcccaag 28088313  T

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Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 32879350 - 32879306
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaag 62  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||    
T  32879350 aatcgaacctgagacctctggaggaccaaactcgaagatcccaag 32879306  T

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Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 42643248 - 42643292
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaag 62  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||    
T  42643248 aatcgaatctgagacctctggaggagcaaactccaagatcccaag 42643292  T

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Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 4698853 - 4698896
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaa 61  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  4698853 aatcgaacctgagacctctgaaggagcaaactccaagatcccaa 4698896  T

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Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 15259536 - 15259579
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaa 61  Q
    ||||||||||||||||||||||||| |||| |||||||||||||    
T  15259536 aatcgaacctgagacctctggaggagcaaaatccaagatcccaa 15259579  T

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Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 27746465 - 27746508
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaa 61  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||    
T  27746465 aatcgaacctgagacctttggaggagcaaactccaagatcccaa 27746508  T

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Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 12 - 62
Target Start/End: Complemental strand, 24018459 - 24018409
Alignment:
Q  12 agagaaaatcgaacctgagacctctggaggaacaaactccaagatcccaag 62  Q
    |||| ||||||||||| |||||| ||||||| |||||||||||||||||||    
T  24018459 agaggaaatcgaacctcagacctttggaggagcaaactccaagatcccaag 24018409  T

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Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 264529 - 264574
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    |||||||||||||| |||||||||| ||||||| ||||||||||||    
T  264529 aatcgaacctgagatctctggaggagcaaactcgaagatcccaagc 264574  T

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Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 651392 - 651347
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    |||||||||||||| |||||||||| ||||||| ||||||||||||    
T  651392 aatcgaacctgagatctctggaggagcaaactcgaagatcccaagc 651347  T

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Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 837127 - 837082
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    |||||||||||||| |||||||||| ||||||| ||||||||||||    
T  837127 aatcgaacctgagatctctggaggagcaaactcgaagatcccaagc 837082  T

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Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 2618257 - 2618212
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    |||||||||  |||||||||||||| ||||||||||||||||||||    
T  2618257 aatcgaacccaagacctctggaggagcaaactccaagatcccaagc 2618212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 8042724 - 8042680
Alignment:
Q  19 atcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    |||||||||||||| | ||||||| ||||||||||||||||||||    
T  8042724 atcgaacctgagacttttggaggagcaaactccaagatcccaagc 8042680  T

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Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 2166770 - 2166727
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaa 61  Q
    ||||||||||||||||| ||||| | ||||||||||||||||||    
T  2166770 aatcgaacctgagacctttggagaagcaaactccaagatcccaa 2166727  T

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Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 8765656 - 8765701
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    |||||||||||||| |||||| ||| |||||||||||||| |||||    
T  8765656 aatcgaacctgagatctctgggggagcaaactccaagatctcaagc 8765701  T

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Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 20305979 - 20305934
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||| ||||||||| ||||||| ||||||| ||||||||||||    
T  20305979 aatcgaaactgagacctttggaggagcaaactctaagatcccaagc 20305934  T

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Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 21092612 - 21092567
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||| ||||||||| ||||||| ||||||| ||||||||||||    
T  21092612 aatcgaaactgagacctttggaggagcaaactctaagatcccaagc 21092567  T

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Target: scaffold0068 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 41774 - 41818
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaag 62  Q
    ||||||||||||||||||||||||| |||||||||||||||||||    
T  41774 aatcgaacctgagacctctggaggagcaaactccaagatcccaag 41818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 5212 - 5257
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||||    
T  5212 aatcgaacctgagacctttggaggagcaaactccaagatcccaagc 5257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 7439 - 7484
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    |||||||||||||| |||||||||| ||||||||||||||||||||    
T  7439 aatcgaacctgagatctctggaggagcaaactccaagatcccaagc 7484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 22 - 60
Target Start/End: Complemental strand, 15054 - 15016
Alignment:
Q  22 gaacctgagacctctggaggaacaaactccaagatccca 60  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  15054 gaacctgagacctctggaggagcaaactccaagatccca 15016  T

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Target: scaffold0717 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 88 - 133
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    |||||||||||||||||||||| || |||||||||||||| |||||    
T  88 aatcgaacctgagacctctggacgagcaaactccaagatcacaagc 133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 59
Target Start/End: Original strand, 8309 - 8350
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatccc 59  Q
    |||||||| |||||||||||||||| ||||||||||||||||    
T  8309 aatcgaacttgagacctctggaggagcaaactccaagatccc 8350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 40392 - 40347
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    |||||||||||||||||||| |||| ||||||||||||||| ||||    
T  40392 aatcgaacctgagacctctgaaggagcaaactccaagatcctaagc 40347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 53001 - 53046
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||||||||  ||||||||||| ||||||||||||||||||||    
T  53001 aatcgaacctgaagcctctggaggagcaaactccaagatcccaagc 53046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 66829 - 66784
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    |||||||| |||||||| ||||||| ||||||||||||||||||||    
T  66829 aatcgaacgtgagacctttggaggagcaaactccaagatcccaagc 66784  T

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Target: scaffold0026 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 97496 - 97541
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaagc 63  Q
    ||||||||||||||||| ||||||| |||||| |||||||||||||    
T  97496 aatcgaacctgagacctttggaggagcaaactacaagatcccaagc 97541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 12884 - 12928
Alignment:
Q  18 aatcgaacctgagacctctggaggaacaaactccaagatcccaag 62  Q
    |||||||||||||| |||||||||| | |||||||||||||||||    
T  12884 aatcgaacctgagatctctggaggagcgaactccaagatcccaag 12928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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