View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6467_high_9 (Length: 241)
Name: NF6467_high_9
Description: NF6467
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6467_high_9 |
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Alignment Details
Target: chr7 (Bit Score: 167; Significance: 1e-89; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 59 - 225
Target Start/End: Original strand, 36960399 - 36960565
Alignment:
| Q |
59 |
cactaacattaaattacagacattttcttgatatcaaatgtaaaattgacatcaaggcctctttgatctaattattctctgccttttgcaaagcaaaatc |
158 |
Q |
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| T |
36960399 |
cactaacattaaattacagacattttcttgatatcaaatgtaaaattgacatcaaggcctctttgatctaattattctctgccttttgcaaagcaaaatc |
36960498 |
T |
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| Q |
159 |
cttcaaaattcaaatacactttttattttgaattctagttcatatgtacattttcttccatcctagt |
225 |
Q |
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| T |
36960499 |
cttcaaaattcaaatacactttttattttgaattctagttcatatgtacattttcttccatcctagt |
36960565 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 36960315 - 36960355
Alignment:
| Q |
1 |
tttggttttattttggaatggaatgaagaagcaacaatcat |
41 |
Q |
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| T |
36960315 |
tttggttttattttggaatggaatgaagaagcaacaatcat |
36960355 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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