View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6467_low_5 (Length: 363)
Name: NF6467_low_5
Description: NF6467
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6467_low_5 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 338; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 338; E-Value: 0
Query Start/End: Original strand, 18 - 363
Target Start/End: Original strand, 34685876 - 34686221
Alignment:
| Q |
18 |
gaatacatacataaacatttcgacaagaaatctacttaggaagttgtattatctaatctaattgttttaatcactgcaaatgtaattttatgtcaaatta |
117 |
Q |
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| T |
34685876 |
gaatacatacataaacatttcgacaagaaatctacttaggaagttgtattatctaatctaattgttttaatcactgcaaatgtaattttatgtcaaatta |
34685975 |
T |
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| Q |
118 |
agctatagtatagtatagtatagtataatacctggttgaggttccaacactcgattgaaaaagttacaaaatgcaggggaaaattgggataagctgaaca |
217 |
Q |
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| T |
34685976 |
agctatagtatagtatagtatagtataatacctggttgaggttccaacactcgattgaaaaagttacaaaatgcaggggaaaattgggataagctgaaca |
34686075 |
T |
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| Q |
218 |
attcactatgatgcactacttctcttagctgcttccacctgttggccatgaccttgtggctgaacttgaaaaatgactcattctctttggagttttcttg |
317 |
Q |
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| T |
34686076 |
attcactatgatgcactacttctcttagctgcttccacctgttcgccatgaccttgtggctgaacttgaaaaatgactcattctctttggagttttcttg |
34686175 |
T |
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| Q |
318 |
ttcacaactgtcagaaactgcacttaaaatcttcgcagccctgagt |
363 |
Q |
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| T |
34686176 |
ttcacaactgtcagaaactgcacttaaaatctttgcagccctgagt |
34686221 |
T |
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