View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6469_low_3 (Length: 610)

Name: NF6469_low_3
Description: NF6469
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6469_low_3
NF6469_low_3
[»] chr8 (17 HSPs)
chr8 (182-602)||(3648794-3649215)
chr8 (415-602)||(29728386-29728574)
chr8 (423-599)||(15838273-15838449)
chr8 (440-602)||(16788025-16788188)
chr8 (419-602)||(34136825-34137009)
chr8 (436-602)||(4404008-4404175)
chr8 (436-602)||(23402108-23402275)
chr8 (423-602)||(39914502-39914681)
chr8 (436-602)||(36408551-36408718)
chr8 (458-589)||(9877242-9877374)
chr8 (45-121)||(3649279-3649355)
chr8 (436-602)||(2729196-2729363)
chr8 (468-602)||(42230971-42231104)
chr8 (455-561)||(3435288-3435397)
chr8 (568-602)||(40470475-40470509)
chr8 (436-510)||(10397132-10397207)
chr8 (285-340)||(14625924-14625979)
[»] chr7 (19 HSPs)
chr7 (423-599)||(5555474-5555651)
chr7 (423-599)||(3114099-3114276)
chr7 (423-602)||(36630803-36630983)
chr7 (423-602)||(8394112-8394292)
chr7 (423-600)||(14777109-14777287)
chr7 (436-602)||(37002144-37002311)
chr7 (436-602)||(34389056-34389223)
chr7 (436-600)||(8867733-8867898)
chr7 (452-602)||(40920003-40920154)
chr7 (445-602)||(35090177-35090335)
chr7 (452-601)||(38638237-38638387)
chr7 (443-602)||(43184468-43184628)
chr7 (440-602)||(26624749-26624913)
chr7 (436-602)||(33685564-33685731)
chr7 (455-602)||(36658200-36658348)
chr7 (436-602)||(7002725-7002892)
chr7 (436-602)||(7048596-7048763)
chr7 (500-561)||(10868514-10868577)
chr7 (568-602)||(10868456-10868490)
[»] chr5 (23 HSPs)
chr5 (415-599)||(10033906-10034091)
chr5 (416-602)||(13817957-13818144)
chr5 (423-599)||(39657509-39657686)
chr5 (423-602)||(36293621-36293801)
chr5 (423-602)||(39434683-39434863)
chr5 (423-601)||(1776377-1776556)
chr5 (436-602)||(31680367-31680534)
chr5 (418-602)||(19985921-19986106)
chr5 (436-602)||(17332551-17332718)
chr5 (455-602)||(16155016-16155164)
chr5 (423-602)||(26283318-26283498)
chr5 (436-602)||(12278860-12279027)
chr5 (436-602)||(37254641-37254808)
chr5 (467-599)||(16333879-16334012)
chr5 (450-602)||(33430335-33430488)
chr5 (423-586)||(3155647-3155811)
chr5 (436-602)||(31501716-31501883)
chr5 (453-602)||(43068894-43069044)
chr5 (438-602)||(36291373-36291538)
chr5 (183-340)||(26254060-26254217)
chr5 (449-561)||(28801300-28801415)
chr5 (267-334)||(16810916-16810983)
chr5 (417-472)||(14316639-14316694)
[»] chr2 (24 HSPs)
chr2 (423-599)||(35962702-35962879)
chr2 (423-599)||(42439973-42440150)
chr2 (423-599)||(18981604-18981780)
chr2 (423-602)||(41251634-41251814)
chr2 (413-599)||(32127144-32127331)
chr2 (423-602)||(31581622-31581802)
chr2 (423-599)||(16405587-16405764)
chr2 (423-602)||(17445041-17445219)
chr2 (413-602)||(6403804-6403994)
chr2 (436-602)||(45418583-45418750)
chr2 (423-572)||(2958131-2958280)
chr2 (442-601)||(771005-771165)
chr2 (436-602)||(44084603-44084770)
chr2 (436-601)||(8147351-8147518)
chr2 (455-602)||(12756837-12756985)
chr2 (417-599)||(2285843-2286026)
chr2 (438-599)||(8059336-8059498)
chr2 (467-602)||(26162702-26162835)
chr2 (416-543)||(26237937-26238065)
chr2 (445-510)||(7072644-7072710)
chr2 (416-561)||(4555250-4555397)
chr2 (436-602)||(26237957-26238110)
chr2 (73-113)||(34077600-34077640)
chr2 (413-465)||(34523217-34523269)
[»] chr6 (13 HSPs)
chr6 (423-599)||(34948761-34948938)
chr6 (423-599)||(13837808-13837985)
chr6 (181-356)||(7838117-7838292)
chr6 (423-602)||(398604-398784)
chr6 (436-602)||(28996730-28996897)
chr6 (436-602)||(18339106-18339273)
chr6 (442-602)||(29743289-29743450)
chr6 (455-602)||(33229336-33229484)
chr6 (45-121)||(7838352-7838428)
chr6 (354-415)||(7838023-7838084)
chr6 (436-531)||(31028435-31028531)
chr6 (436-520)||(24697899-24697984)
chr6 (436-472)||(13647017-13647053)
[»] chr4 (39 HSPs)
chr4 (423-602)||(25930695-25930875)
chr4 (423-599)||(29319708-29319885)
chr4 (423-602)||(36382346-36382525)
chr4 (423-602)||(20129297-20129477)
chr4 (438-602)||(43143584-43143749)
chr4 (417-599)||(40528994-40529179)
chr4 (439-602)||(3292896-3293060)
chr4 (411-602)||(13012163-13012355)
chr4 (436-602)||(30216742-30216909)
chr4 (416-602)||(17511233-17511420)
chr4 (423-602)||(26439279-26439459)
chr4 (423-602)||(34407284-34407464)
chr4 (423-602)||(47500760-47500940)
chr4 (436-602)||(6690235-6690402)
chr4 (437-590)||(42333788-42333942)
chr4 (436-600)||(50205079-50205244)
chr4 (423-602)||(43355891-43356071)
chr4 (438-602)||(48989330-48989495)
chr4 (491-602)||(6235575-6235687)
chr4 (436-602)||(10352884-10353051)
chr4 (442-602)||(29995983-29996144)
chr4 (467-602)||(44156682-44156818)
chr4 (437-602)||(30077631-30077797)
chr4 (436-602)||(26448053-26448219)
chr4 (439-602)||(28877250-28877414)
chr4 (460-602)||(35545977-35546120)
chr4 (471-602)||(1817752-1817884)
chr4 (515-590)||(13392893-13392968)
chr4 (515-590)||(13396032-13396107)
chr4 (448-532)||(48129978-48130063)
chr4 (438-561)||(30109958-30110084)
chr4 (413-520)||(27363338-27363446)
chr4 (568-602)||(30110108-30110142)
chr4 (438-535)||(45194178-45194276)
chr4 (568-602)||(48130111-48130145)
chr4 (461-528)||(6254569-6254637)
chr4 (280-340)||(52999105-52999165)
chr4 (436-473)||(49908782-49908819)
chr4 (436-476)||(7769328-7769368)
[»] chr1 (15 HSPs)
chr1 (423-599)||(7433432-7433609)
chr1 (416-602)||(32982056-32982243)
chr1 (416-602)||(42310941-42311128)
chr1 (423-602)||(26144242-26144422)
chr1 (444-602)||(321377-321536)
chr1 (440-602)||(3828988-3829150)
chr1 (436-602)||(35907552-35907719)
chr1 (436-601)||(17445313-17445479)
chr1 (423-541)||(23313225-23313345)
chr1 (415-561)||(41972314-41972462)
chr1 (436-561)||(33489687-33489815)
chr1 (568-602)||(33489839-33489873)
chr1 (568-602)||(41972256-41972290)
chr1 (280-333)||(25795940-25795993)
chr1 (370-414)||(13159028-13159072)
[»] chr3 (20 HSPs)
chr3 (423-602)||(19390133-19390313)
chr3 (423-601)||(6269427-6269606)
chr3 (423-602)||(22968444-22968624)
chr3 (423-602)||(34084122-34084302)
chr3 (436-602)||(45182981-45183148)
chr3 (436-602)||(11018212-11018379)
chr3 (423-602)||(39771777-39771957)
chr3 (436-602)||(6930894-6931061)
chr3 (415-602)||(40081741-40081926)
chr3 (436-602)||(33040953-33041120)
chr3 (436-602)||(45335875-45336041)
chr3 (435-602)||(27935177-27935345)
chr3 (436-602)||(6503569-6503736)
chr3 (436-586)||(19565517-19565668)
chr3 (436-602)||(35514266-35514429)
chr3 (452-561)||(5135285-5135397)
chr3 (423-493)||(22922144-22922214)
chr3 (554-602)||(22922214-22922262)
chr3 (568-602)||(5135421-5135455)
chr3 (436-485)||(5354709-5354758)
[»] scaffold0069 (1 HSPs)
scaffold0069 (414-602)||(17820-18009)
[»] scaffold0002 (1 HSPs)
scaffold0002 (423-602)||(480457-480637)
[»] scaffold2142 (1 HSPs)
scaffold2142 (413-602)||(499-689)
[»] scaffold0502 (1 HSPs)
scaffold0502 (436-602)||(5230-5397)
[»] scaffold0041 (1 HSPs)
scaffold0041 (452-602)||(52941-53092)
[»] scaffold0154 (1 HSPs)
scaffold0154 (436-602)||(31480-31647)


Alignment Details
Target: chr8 (Bit Score: 334; Significance: 0; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 334; E-Value: 0
Query Start/End: Original strand, 182 - 602
Target Start/End: Complemental strand, 3649215 - 3648794
Alignment:
Q  182 cttcacgcactagaaagtgcgacatacctaacatgtgtgatttaaccatagattagagttggaagcttataactagctcgagtatgaaccattgcatctg 281  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||    
T  3649215 cttcacgcactaggaagtgcgacatacctaacatgtgtgatttaaccatagattagagttggaagcttatgactagctcgagtatgaaccattgcatgtg 3649116  T
Q  282 aattttattctaatttctttaattaattagagataattagggtatgtggttaacttctacgcttcatgtttgaaacatgactcgtttgaattacatgtga 381  Q
    || || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  3649115 aacttaattctaatttctttaatcaattagagataattagggtatgtggttaacttctacgcttcatgtttgaaacatgactcgtttgaattatatgtga 3649016  T
Q  382 aagtctaagtctccactttagtaatgatatcaaccaggggtggttctaccgtatggcgaccccgggcggtcgtccgggctcgatagataattttttcaca 481  Q
    |||||||||||| ||||||||||| ||||||||||||||| |||||||||||||||||| || || | |||| ||||||||||| |||||||||||||||    
T  3649015 aagtctaagtcttcactttagtaacgatatcaaccaggggcggttctaccgtatggcgatccgggacagtcgcccgggctcgatcgataattttttcaca 3648916  T
Q  482 ttagactcaacccaaaag-ccattaacacatttgcaaaaagaaaaatttgggcaatctgaaaattgtcacacacaaataggttttggaattttatttagc 580  Q
    |||||||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  3648915 ttagactcaacccaaaagcccattaacacatttacaaaaagaaaattttgggcaatctgaaaattgtcacacgcaagtaggttttggaattttatttagc 3648816  T
Q  581 acactattgacgggttcatctc 602  Q
    ||||||||||||||||||||||    
T  3648815 acactattgacgggttcatctc 3648794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 415 - 602
Target Start/End: Complemental strand, 29728574 - 29728386
Alignment:
Q  415 ccaggggtggttctaccgtatggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagc-cattaacacattt 513  Q
    ||||||| |||||||||||||||||||||||| |||||| ||| ||||||| ||||| |||| ||||||||||||||||||||||| |||||||||||||    
T  29728574 ccaggggcggttctaccgtatggcgaccccggacggtcgcccgtgctcgatcgataaattttgcacattagactcaacccaaaagctcattaacacattt 29728475  T
Q  514 gcaaaaagaaaaatttgggcaatctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcatctc 602  Q
     ||||||||||||||||||||||||||||||||| |||| ||||||||| || ||||||||||||||||||||||||||||||||||||    
T  29728474 acaaaaagaaaaatttgggcaatctgaaaattgtgacacgcaaataggtcttcgaattttatttagcacactattgacgggttcatctc 29728386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 423 - 599
Target Start/End: Original strand, 15838273 - 15838449
Alignment:
Q  423 ggttctaccgtatggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaag-ccattaacacatttgcaaaaag 521  Q
    ||||||||||||||||||||||||||||||  ||||||||||| |||||||||| ||||||| |||||||| ||||| |||||||||||||| ||||| |    
T  15838273 ggttctaccgtatggcgaccccgggcggtcacccgggctcgattgataatttttgcacattaaactcaaccaaaaagtccattaacacatttacaaaa-g 15838371  T
Q  522 aaaaatttgggcaatctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcat 599  Q
    |||||||||||||||||||||||| |||||| ||||||||| ||||||||||||||||||||||||||||||||||||    
T  15838372 aaaaatttgggcaatctgaaaattttcacacgcaaataggtcttggaattttatttagcacactattgacgggttcat 15838449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 440 - 602
Target Start/End: Complemental strand, 16788188 - 16788025
Alignment:
Q  440 accccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagcca-ttaacacatttgcaaaaagaaaaatttgggcaatct 538  Q
    |||||||||||||| ||||||||||| |||||||||| ||||||||||||||||||||||||| |||||||| || ||||||||||||||||||||||||    
T  16788188 accccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatct 16788089  T
Q  539 gaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcatctc 602  Q
     |||| | |||||| ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  16788088 taaaactctcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatctc 16788025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 419 - 602
Target Start/End: Complemental strand, 34137009 - 34136825
Alignment:
Q  419 gggtggttctaccgtatggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagcca-ttaacacatttgcaa 517  Q
    ||||||||  ||||| ||||||||||| ||||||| ||||||||||| |||||||||| |||||||||||||||||||||| || |||||||| || |||    
T  34137009 gggtggtttcaccgtctggcgaccccgagcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagtcaattaacacacttacaa 34136910  T
Q  518 aaagaaaaatttgggcaatctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcatctc 602  Q
    |||||||||||||||||||||||||||| |||||| ||||||||| | | ||||||||||||||||| ||||| |||||||||||    
T  34136909 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcgaaattttatttagcacacaattgatgggttcatctc 34136825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 436 - 602
Target Start/End: Original strand, 4404008 - 4404175
Alignment:
Q  436 ggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagcca-ttaacacatttgcaaaaagaaaaatttgggca 534  Q
    ||||||||| |||||||| ||||||||||| |||||||||| ||||||||||||||||||||||||| |||||| | || ||||||||||||||||||||    
T  4404008 ggcgaccccaggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacatacttacaaaaagaaaaatttgggca 4404107  T
Q  535 atctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcatctc 602  Q
    |||| |||||| |||||| ||||||||| | ||||||||||||||||||| ||||| |||||||||||    
T  4404108 atctaaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 4404175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 436 - 602
Target Start/End: Original strand, 23402108 - 23402275
Alignment:
Q  436 ggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagcca-ttaacacatttgcaaaaagaaaaatttgggca 534  Q
    |||||||||||||||||| ||||||||||| |||||| ||| || ||||||| |||||||||||||| |||||||| || ||||||||||||||||||||    
T  23402108 ggcgaccccgggcggtcgcccgggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggca 23402207  T
Q  535 atctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcatctc 602  Q
    ||||||||||| |||||| ||||||||| | | ||||||||||| |||||||||||| ||||||||||    
T  23402208 atctgaaaattctcacacgcaaataggtctcgaaattttatttaacacactattgactggttcatctc 23402275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 423 - 602
Target Start/End: Original strand, 39914502 - 39914681
Alignment:
Q  423 ggttctaccgtatggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagc-cattaacacatttgcaaaaag 521  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||| |||||||||| |||||||||||||||| |||||| |||||||||||||  |||||     
T  39914502 ggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacatttataaaaa- 39914600  T
Q  522 aaaaatttgggcaatctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcatctc 602  Q
    ||||||||||||||| ||||||||||||||   |||||||| |||||||||||||| ||||||||||||| | ||||||||    
T  39914601 aaaaatttgggcaatttgaaaattgtcacaagtaaataggtcttggaattttatttggcacactattgacagtttcatctc 39914681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 436 - 602
Target Start/End: Original strand, 36408551 - 36408718
Alignment:
Q  436 ggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaag-ccattaacacatttgcaaaaagaaaaatttgggca 534  Q
    ||||||| |||||||||| ||||||||||| |||||||||| |||||||||  ||||||||||| |||||||||||||| ||||||||||| ||| ||||    
T  36408551 ggcgacctcgggcggtcgcccgggctcgatcgataatttttgcacattagatccaacccaaaagtccattaacacatttacaaaaagaaaatttttggca 36408650  T
Q  535 atctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcatctc 602  Q
    || |||||||| | |||| | ||||||| |  |||||||||||| |||||||||| ||| ||||||||    
T  36408651 atttgaaaattcttacacgctaataggtctcagaattttatttaacacactattgccggattcatctc 36408718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 458 - 589
Target Start/End: Original strand, 9877242 - 9877374
Alignment:
Q  458 ggctcgatagataattttttcacattagactcaacccaaaagcca-ttaacacatttgcaaaaagaaaaatttgggcaatctgaaaattgtcacacacaa 556  Q
    |||||||| |||||||||| ||||||||||  |||||||||| || |||||||| || ||||||||||||||||||||||||||||||| |||||  |||    
T  9877242 ggctcgattgataatttttgcacattagacctaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacatgcaa 9877341  T
Q  557 ataggttttggaattttatttagcacactattg 589  Q
    |||||| | | ||||||||||||||||||||||    
T  9877342 ataggtctcgaaattttatttagcacactattg 9877374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 45 - 121
Target Start/End: Complemental strand, 3649355 - 3649279
Alignment:
Q  45 tttgttaccttgagtaattaaaaatttattgattagaattctaagatgaatctctatttatttgttgaatgcaagtc 121  Q
    ||||||||| |||||||||||||||||| ||||||| |||||||||||||| |||||||||||||||||||||||||    
T  3649355 tttgttaccatgagtaattaaaaatttactgattaggattctaagatgaatttctatttatttgttgaatgcaagtc 3649279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 436 - 602
Target Start/End: Complemental strand, 2729363 - 2729196
Alignment:
Q  436 ggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagcc-attaacacatttgcaaaaagaaaaatttgggca 534  Q
    ||||||||||||||| || ||||||||||| |||||||||| ||||||| |  ||| ||||||||| ||||||||| ||  |||||||||  ||| ||||    
T  2729363 ggcgaccccgggcggacgcccgggctcgatcgataatttttacacattaaatccaatccaaaagcccattaacacacttataaaaagaaattttttggca 2729264  T
Q  535 atctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcatctc 602  Q
    || |||||| | ||| || ||||||||| |   ||||||||||||||||||||||| || ||||||||    
T  2729263 atttgaaaactctcatacgcaaataggtctcaaaattttatttagcacactattgatggattcatctc 2729196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 468 - 602
Target Start/End: Original strand, 42230971 - 42231104
Alignment:
Q  468 ataattttttcacattagactcaacccaaaag-ccattaacacatttgcaaaaagaaaaatttgggcaatctgaaaattgtcacacacaaataggttttg 566  Q
    ||||||||| ||||||| |  |||| |||||| ||||||||||  || |||||||||||||||||||||| |||||||| ||| |  ||||||||| |      
T  42230971 ataatttttgcacattaaatccaactcaaaagtccattaacac--ttacaaaaagaaaaatttgggcaatttgaaaattctcatatgcaaataggtctca 42231068  T
Q  567 gaattttatttagcacactattgacgggttcatctc 602  Q
    ||||||||||||||||||||||||||| ||||||||    
T  42231069 gaattttatttagcacactattgacggattcatctc 42231104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 455 - 561
Target Start/End: Original strand, 3435288 - 3435397
Alignment:
Q  455 ccgggctcgatagataattttttcacattagactcaacccaaaagcc-attaacacatttgcaaaaagaaaaatttgggc--aatctgaaaattgtcaca 551  Q
    ||||||| ||| |||||||||| |||||||||| |||||||||| || ||||||||| || |||||||||||||||||||  |||||||||||| ||| |    
T  3435288 ccgggcttgatcgataatttttgcacattagacccaacccaaaaacccattaacacacttacaaaaagaaaaatttgggcaaaatctgaaaattctcaaa 3435387  T
Q  552 cacaaatagg 561  Q
    | ||||||||    
T  3435388 cgcaaatagg 3435397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 568 - 602
Target Start/End: Complemental strand, 40470509 - 40470475
Alignment:
Q  568 aattttatttagcacactattgacgggttcatctc 602  Q
    |||||||||||||||||||||||||||||||||||    
T  40470509 aattttatttagcacactattgacgggttcatctc 40470475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 436 - 510
Target Start/End: Complemental strand, 10397207 - 10397132
Alignment:
Q  436 ggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagcc-attaacaca 510  Q
    |||||| ||||||  ||| |||||||| || |||||||| ||||||||||  |||||||||||||| |||||||||    
T  10397207 ggcgactccgggcactcgcccgggctcaatcgataatttcttcacattaggttcaacccaaaagccgattaacaca 10397132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 285 - 340
Target Start/End: Complemental strand, 14625979 - 14625924
Alignment:
Q  285 tttattctaatttctttaattaattagagataattagggtatgtggttaacttcta 340  Q
    |||||| | ||||||||| | |||||||||||||||||||||||||| || |||||    
T  14625979 tttattattatttctttagtcaattagagataattagggtatgtggtgaaattcta 14625924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 146; Significance: 1e-76; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 423 - 599
Target Start/End: Original strand, 5555474 - 5555651
Alignment:
Q  423 ggttctaccgtatggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagcc-attaacacatttgcaaaaag 521  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||||||||||||||||||| |||||| ||||| |||||||    
T  5555474 ggttctaccgtatggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacgcatttacaaaaag 5555573  T
Q  522 aaaaatttgggcaatctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcat 599  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  5555574 aaaaatttgggcaatctgaaaattgtcacacacaaataggtcttggaattttatttagcacactattgacgggttcat 5555651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 423 - 599
Target Start/End: Complemental strand, 3114276 - 3114099
Alignment:
Q  423 ggttctaccgtatggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagcc-attaacacatttgcaaaaag 521  Q
    ||||||||||||||| |||||||| |||||| ||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||| |||||||    
T  3114276 ggttctaccgtatggtgaccccggacggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaag 3114177  T
Q  522 aaaaatttgggcaatctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcat 599  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  3114176 aaaaatttgggcaatctgaaaattgtcacacacaaataggtcttggaattttatttagcacactattgacgggttcat 3114099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 423 - 602
Target Start/End: Original strand, 36630803 - 36630983
Alignment:
Q  423 ggttctaccgtatggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaag-ccattaacacatttgcaaaaag 521  Q
    |||||||||||||||||||||||| |||||| ||||||||||| |||||||||| ||||||| |||||||| ||||| |||||||||||||| |||||||    
T  36630803 ggttctaccgtatggcgaccccggacggtcgcccgggctcgatcgataatttttgcacattaaactcaaccaaaaagtccattaacacatttacaaaaag 36630902  T
Q  522 aaaaatttgggcaatctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcatctc 602  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||    
T  36630903 aaaaatttgggcaatctgaaaattgtcacacgcaaataggtcttggaattttagttagcacactattgacgggttcatctc 36630983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 423 - 602
Target Start/End: Original strand, 8394112 - 8394292
Alignment:
Q  423 ggttctaccgtatggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaag-ccattaacacatttgcaaaaag 521  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||||||||| ||||||| |||||||| ||||| |||||||||||||| ||||| |    
T  8394112 ggttctaccgtatggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattaaactcaaccaaaaagtccattaacacatttacaaaagg 8394211  T
Q  522 aaaaatttgggcaatctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcatctc 602  Q
    |||||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||||||||||||||| |||||    
T  8394212 aaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacgggtttatctc 8394292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 423 - 600
Target Start/End: Complemental strand, 14777287 - 14777109
Alignment:
Q  423 ggttctaccgtatggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagc-cattaacacatttgcaaaaag 521  Q
    ||||||||||| | |||| |||||||||||| ||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||    
T  14777287 ggttctaccgtgtagcgatcccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagctcattaacacatttacaaaaag 14777188  T
Q  522 aaaaatttgggcaatctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcatc 600  Q
    |||||||||||||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||| | ||||||    
T  14777187 aaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatc 14777109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 436 - 602
Target Start/End: Complemental strand, 37002311 - 37002144
Alignment:
Q  436 ggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagcca-ttaacacatttgcaaaaagaaaaatttgggca 534  Q
    ||||||||||||||||||| ||| |||||| |||||||||| |||||||||| ||| ||||||| || |||||||| || ||||||||||||||||||||    
T  37002311 ggcgaccccgggcggtcgttcggtctcgatcgataatttttgcacattagacccaatccaaaagtcaattaacacacttacaaaaagaaaaatttgggca 37002212  T
Q  535 atctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcatctc 602  Q
    ||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  37002211 atctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatctc 37002144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 436 - 602
Target Start/End: Complemental strand, 34389223 - 34389056
Alignment:
Q  436 ggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagcca-ttaacacatttgcaaaaagaaaaatttgggca 534  Q
    |||||||||||||||||| ||||||||||| |||||||||| |||||||||| |||||||||||| | |||||||| || ||||||||||||||||||||    
T  34389223 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacccaaaagctaattaacacacttacaaaaagaaaaatttgggca 34389124  T
Q  535 atctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcatctc 602  Q
    ||||||||||| |||||| ||||||||| | |||||||||||||||||| ||| ||||||||||||||    
T  34389123 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacattatcgacgggttcatctc 34389056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 436 - 600
Target Start/End: Complemental strand, 8867898 - 8867733
Alignment:
Q  436 ggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagcca-ttaacacatttgcaaaaagaaaaatttgggca 534  Q
    |||||||||||||||||| ||||||||||| |||||||||| || ||||||| ||| |||||||||| |||| |||||| ||||||||||||||||||||    
T  8867898 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcatattagacccaatccaaaagccaattaatacatttacaaaaagaaaaatttgggca 8867799  T
Q  535 atctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcatc 600  Q
    ||| ||||||| |||||| ||||||||| | |||||||||||||||||||||||||||| ||||||    
T  8867798 atcggaaaattttcacacgcaaataggtctcggaattttatttagcacactattgacggattcatc 8867733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 452 - 602
Target Start/End: Complemental strand, 40920154 - 40920003
Alignment:
Q  452 cgtccgggctcgatagataattttttcacattagactcaacccaaaagcca-ttaacacatttgcaaaaagaaaaatttgggcaatctgaaaattgtcac 550  Q
    |||||||||||||| |||||||||| ||||||||| | ||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||| ||||    
T  40920154 cgtccgggctcgatcgataatttttgcacattagatttaacccaaaagccaattaacacatttacaaaaagaaaaatttggacaatctgaaaattctcac 40920055  T
Q  551 acacaaataggttttggaattttatttagcacactattgacgggttcatctc 602  Q
    |  ||||||||| | |||||||||||||||||||||||||||||||||||||    
T  40920054 atgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 40920003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 445 - 602
Target Start/End: Original strand, 35090177 - 35090335
Alignment:
Q  445 gggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagcca-ttaacacatttgcaaaaagaaaaatttgggcaatctgaaaa 543  Q
    ||||||||| |||||||||||  ||||||||| |||||||||| |||||||||||||| |||||||| || |||||||||||||||||| ||||||||||    
T  35090177 gggcggtcgcccgggctcgatcaataatttttgcacattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggtaatctgaaaa 35090276  T
Q  544 ttgtcacacacaaataggttttggaattttatttagcacactattgacgggttcatctc 602  Q
    || |||||| ||||||||| | |||||||||||||||||||||||||||| ||||||||    
T  35090277 ttctcacacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 35090335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 452 - 601
Target Start/End: Complemental strand, 38638387 - 38638237
Alignment:
Q  452 cgtccgggctcgatagataattttttcacattagactcaacccaaaagcca-ttaacacatttgcaaaaagaaaaatttgggcaatctgaaaattgtcac 550  Q
    |||||| ||||||| |||||||||| |||||||||  ||||||||||| || |||||||| || ||||||||||||||||||||||||||||||| ||||    
T  38638387 cgtccgagctcgattgataatttttgcacattagatccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcac 38638288  T
Q  551 acacaaataggttttggaattttatttagcacactattgacgggttcatct 601  Q
    || ||||||||| | ||||||||||||||||||||||||||||||||||||    
T  38638287 acgcaaataggtctcggaattttatttagcacactattgacgggttcatct 38638237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 443 - 602
Target Start/End: Complemental strand, 43184628 - 43184468
Alignment:
Q  443 ccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagcca-ttaacacatttgcaaaaagaaaaatttgggcaatctgaa 541  Q
    |||||||||||  |||||||||| |||||||||| | ||| ||||| ||||||||||||| |||||| | || |||||||||||||||||||||||||||    
T  43184628 ccgggcggtcgctcgggctcgatcgataatttttacgcatcagacttaacccaaaagccaattaacatacttacaaaaagaaaaatttgggcaatctgaa 43184529  T
Q  542 aattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcatctc 602  Q
    |||| |||||| ||||||||| |  ||||||||||||||||||||||||||||||||||||    
T  43184528 aattctcacacgcaaataggtctctgaattttatttagcacactattgacgggttcatctc 43184468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 440 - 602
Target Start/End: Original strand, 26624749 - 26624913
Alignment:
Q  440 accccgggcggtcgtccgggctcgata-gataattttttcacattagactcaacccaaaagcca-ttaacacatttgcaaaaagaaaaatttgggcaatc 537  Q
    |||||||||||||| | |||||||||  |||||||||| || ||||||| ||| |||||||  | |||||||| || |||||||||||||||||||||||    
T  26624749 accccgggcggtcgcctgggctcgattcgataatttttgcatattagacccaatccaaaagttaattaacacacttacaaaaagaaaaatttgggcaatc 26624848  T
Q  538 tgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcatctc 602  Q
    |||||||| |||||| ||||||||| | |||||||||||||||||||||||||||||||||||||    
T  26624849 tgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 26624913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 436 - 602
Target Start/End: Original strand, 33685564 - 33685731
Alignment:
Q  436 ggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagcc-attaacacatttgcaaaaagaaaaatttgggca 534  Q
    ||||||||| ||| ||||  |||||||||| |||||||||| ||||||| || ||||||||||||| ||||||||| || ||||||||||||||||||||    
T  33685564 ggcgaccccaggcagtcgctcgggctcgatcgataatttttgcacattaaacccaacccaaaagcccattaacacacttacaaaaagaaaaatttgggca 33685663  T
Q  535 atctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcatctc 602  Q
    ||||||||||| ||| || |||||| || |   ||||||||||||||||||||||||||||| |||||    
T  33685664 atctgaaaattctcatacgcaaatatgtctcataattttatttagcacactattgacgggtttatctc 33685731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 455 - 602
Target Start/End: Original strand, 36658200 - 36658348
Alignment:
Q  455 ccgggctcgatagataattttttcacattagactcaacccaaaagcca-ttaacacatttgcaaaaagaaaaatttgggcaatctgaaaattgtcacaca 553  Q
    |||| |||||| |||||||||| |||||| ||| ||||| |||||||| |||||| | |  |||||| |||||||||||||||||||||||| ||||||     
T  36658200 ccggactcgatcgataatttttgcacattggacccaaccgaaaagccaattaacatactaacaaaaataaaaatttgggcaatctgaaaattctcacacg 36658299  T
Q  554 caaataggttttggaattttatttagcacactattgacgggttcatctc 602  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||    
T  36658300 caaataggtctcggaattttatttagcacactattgacgggttcatctc 36658348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 436 - 602
Target Start/End: Original strand, 7002725 - 7002892
Alignment:
Q  436 ggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagcca-ttaacacatttgcaaaaagaaaaatttgggca 534  Q
    |||||||||| ||||||| ||||||||||| ||  ||||||  |||||| || |||||||||||||| ||||||||  | |||||| |||||||||| ||    
T  7002725 ggcgaccccgagcggtcgcccgggctcgatcgacgatttttctacattacacccaacccaaaagccaattaacacacatacaaaaataaaaatttggaca 7002824  T
Q  535 atctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcatctc 602  Q
    |||| |||||| |||||| |||||||||   |||||||||||||||||||||||||||||||||||||    
T  7002825 atctaaaaattctcacacgcaaataggtcacggaattttatttagcacactattgacgggttcatctc 7002892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 436 - 602
Target Start/End: Original strand, 7048596 - 7048763
Alignment:
Q  436 ggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagcca-ttaacacatttgcaaaaagaaaaatttgggca 534  Q
    |||||||||| ||||||| ||||||||||| ||  ||||||  |||||| || |||||||||||||| ||||||||  | |||||| |||||||||| ||    
T  7048596 ggcgaccccgagcggtcgcccgggctcgatcgacgatttttctacattacacccaacccaaaagccaattaacacacatacaaaaataaaaatttggaca 7048695  T
Q  535 atctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcatctc 602  Q
    |||| |||||| |||||| |||||||||   |||||||||||||||||||||||||||||||||||||    
T  7048696 atctaaaaattctcacacgcaaataggtcacggaattttatttagcacactattgacgggttcatctc 7048763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 500 - 561
Target Start/End: Complemental strand, 10868577 - 10868514
Alignment:
Q  500 ccattaacacatttgcaaaaagaaaaatttgggc--aatctgaaaattgtcacacacaaatagg 561  Q
    |||||||||||||| |||||||||||||||||||  |||||||||||| |||| | ||||||||    
T  10868577 ccattaacacatttacaaaaagaaaaatttgggcaaaatctgaaaattctcacgcgcaaatagg 10868514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 568 - 602
Target Start/End: Complemental strand, 10868490 - 10868456
Alignment:
Q  568 aattttatttagcacactattgacgggttcatctc 602  Q
    |||||||||||||||||| ||||||||||||||||    
T  10868490 aattttatttagcacacttttgacgggttcatctc 10868456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 142; Significance: 3e-74; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 415 - 599
Target Start/End: Original strand, 10033906 - 10034091
Alignment:
Q  415 ccaggggtggttctaccgtatggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagcc-attaacacattt 513  Q
    ||||||| |||||||||||||||||||||||| || ||| ||||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||||    
T  10033906 ccaggggcggttctaccgtatggcgaccccggacgatcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattt 10034005  T
Q  514 gcaaaaagaaaaatttgggcaatctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcat 599  Q
     |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||    
T  10034006 acaaaaagaaaaatttgggcaatctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcat 10034091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 416 - 602
Target Start/End: Original strand, 13817957 - 13818144
Alignment:
Q  416 caggggtggttctaccgtatggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagcc-attaacacatttg 514  Q
    |||||| |||||||||||||||||||||||||||||||  |||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||||     
T  13817957 caggggcggttctaccgtatggcgaccccgggcggtcgctcgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 13818056  T
Q  515 caaaaagaaaaatttgggcaatctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcatctc 602  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| |||||| |||||||||||||||||||||||| |||||||    
T  13818057 caaaaagaaaaatttgggcaatctgaaaattgtcacacgcaaataggtcttggaaatttatttagcacactattgacgggctcatctc 13818144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 423 - 599
Target Start/End: Complemental strand, 39657686 - 39657509
Alignment:
Q  423 ggttctaccgtatggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagc-cattaacacatttgcaaaaag 521  Q
    ||||||||  |||||||||||| | ||||||| |||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||    
T  39657686 ggttctactatatggcgaccccagacggtcgttcgggctcgattgataatttttgcacattagactcaacccaaaagctcattaacacatttacaaaaag 39657587  T
Q  522 aaaaatttgggcaatctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcat 599  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||    
T  39657586 aaaaatttgggcaatctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcat 39657509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 423 - 602
Target Start/End: Complemental strand, 36293801 - 36293621
Alignment:
Q  423 ggttctaccgtatggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagcc-attaacacatttgcaaaaag 521  Q
    ||||||||||| ||||||||||| |||||||||||| |||||| ||||||||||  ||||||||||||||||||||||| |||||||||||| |||||||    
T  36293801 ggttctaccgtgtggcgaccccgagcggtcgtccggactcgatcgataatttttgtacattagactcaacccaaaagcccattaacacatttacaaaaag 36293702  T
Q  522 aaaaatttgggcaatctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcatctc 602  Q
    |||||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||||||| || | ||||||||    
T  36293701 aaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactatttacagtttcatctc 36293621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 423 - 602
Target Start/End: Original strand, 39434683 - 39434863
Alignment:
Q  423 ggttctaccgtatggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagcc-attaacacatttgcaaaaag 521  Q
    ||||||||||| ||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| ||||| |    
T  39434683 ggttctaccgtgtggcgaccctgggcggtcgcccgggctcgatcgataattttttcacattagactcaacccaaaagcccattaacacatttacaaaatg 39434782  T
Q  522 aaaaatttgggcaatctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcatctc 602  Q
    ||||||||||||||||||||||||||||||   |||||||| || ||||||||||||||||||||||||| | ||||||||    
T  39434783 aaaaatttgggcaatctgaaaattgtcacatgtaaataggtctttgaattttatttagcacactattgacagtttcatctc 39434863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 423 - 601
Target Start/End: Complemental strand, 1776556 - 1776377
Alignment:
Q  423 ggttctaccgtatggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaag-ccattaacacatttgcaaaaag 521  Q
    |||||||||||||| |||||||||||||||| ||||||||||| ||||||||||  |||||| | |||||| ||||| |||||||||||||| |||||||    
T  1776556 ggttctaccgtatgacgaccccgggcggtcgcccgggctcgatcgataatttttgtacattaaagtcaaccaaaaagtccattaacacatttacaaaaag 1776457  T
Q  522 aaaaatttgggcaatctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcatct 601  Q
    ||||||||||||||| ||||||||||||||| ||||||||| |||||||||||||||||||||||| ||| |||||||||    
T  1776456 aaaaatttgggcaatttgaaaattgtcacacgcaaataggtcttggaattttatttagcacactatcgacaggttcatct 1776377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 436 - 602
Target Start/End: Original strand, 31680367 - 31680534
Alignment:
Q  436 ggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagcca-ttaacacatttgcaaaaagaaaaatttgggca 534  Q
    |||||||||||||||||| ||||||||||| |||||||||| | |||||||| |||||||||||||| |||||||| || ||||||||||||||||||||    
T  31680367 ggcgaccccgggcggtcgcccgggctcgatcgataatttttccgcattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggca 31680466  T
Q  535 atctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcatctc 602  Q
    ||||||||||| |||||  ||||||||| | |||||||||||||||||||||||||||||||||||||    
T  31680467 atctgaaaattctcacatgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 31680534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 418 - 602
Target Start/End: Original strand, 19985921 - 19986106
Alignment:
Q  418 ggggtggttctaccgtatggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaag-ccattaacacatttgca 516  Q
    ||||||||| ||||||||| ||||| |||||||||||||| ||||||| |||||||||| ||||||||| |||||||||||| |||||| ||||||| ||    
T  19985921 ggggtggttttaccgtatgacgacctcgggcggtcgtccgagctcgatcgataatttttgcacattagattcaacccaaaagtccattagcacatttaca 19986020  T
Q  517 aaaagaaaaatttgggcaatctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcatctc 602  Q
    |||||||||||||||| ||||| |||||| |||||| ||||||||| ||| ||||||||||| |||||||||||| ||||||||||    
T  19986021 aaaagaaaaatttgggtaatctaaaaattatcacacgcaaataggtcttgaaattttatttaacacactattgacaggttcatctc 19986106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 436 - 602
Target Start/End: Complemental strand, 17332718 - 17332551
Alignment:
Q  436 ggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagcca-ttaacacatttgcaaaaagaaaaatttgggca 534  Q
    |||||||||||||| ||| ||||||||||| |||||||||| || ||||||| |||||||||||||| |||||||| || ||||||||||||||||||||    
T  17332718 ggcgaccccgggcgttcgcccgggctcgatcgataatttttgcatattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggca 17332619  T
Q  535 atctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcatctc 602  Q
    ||||||||||| |||||| ||||||||| | |||||||||||||||||||||||||||| ||||||||    
T  17332618 atctgaaaattttcacacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 17332551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 455 - 602
Target Start/End: Original strand, 16155016 - 16155164
Alignment:
Q  455 ccgggctcgatagataattttttcacattagactcaacccaaaagcc-attaacacatttgcaaaaagaaaaatttgggcaatctgaaaattgtcacaca 553  Q
    ||||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||||  |||||||||||||| ||||||||||||||||||||||     
T  16155016 ccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttataaaaagaaaaatttaggcaatctgaaaattgtcacacg 16155115  T
Q  554 caaataggttttggaattttatttagcacactattgacgggttcatctc 602  Q
    ||||||||| |||||||||||||||||||||||||||| | ||||||||    
T  16155116 caaataggtcttggaattttatttagcacactattgacagattcatctc 16155164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 423 - 602
Target Start/End: Complemental strand, 26283498 - 26283318
Alignment:
Q  423 ggttctaccgtatggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagc-cattaacacatttgcaaaaag 521  Q
    ||||| ||||| | |||||| |||||||||| ||||||||||| |||||||||| |||||||||||||||| |||||  |||||||||||||  ||||||    
T  26283498 ggttccaccgtgtagcgacctcgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagttcattaacacatttataaaaag 26283399  T
Q  522 aaaaatttgggcaatctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcatctc 602  Q
    |||||||||||||||||||||||||||||||  |||||||| |||||||||||||| ||||||||||||| | ||||||||    
T  26283398 aaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatctc 26283318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 436 - 602
Target Start/End: Complemental strand, 12279027 - 12278860
Alignment:
Q  436 ggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagcca-ttaacacatttgcaaaaagaaaaatttgggca 534  Q
    ||||| |||||||||||| |||| |||||| |||||||||| |||||||||| ||||||||| |||| |||||||| || ||||||||||||||||||||    
T  12279027 ggcgatcccgggcggtcgcccggactcgatcgataatttttgcacattagacccaacccaaaggccaattaacacacttacaaaaagaaaaatttgggca 12278928  T
Q  535 atctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcatctc 602  Q
    ||||||||||| |||||| ||||||||| | |||||||||||||||||||||||||| ||||||||||    
T  12278927 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacaggttcatctc 12278860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 436 - 602
Target Start/End: Original strand, 37254641 - 37254808
Alignment:
Q  436 ggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagcca-ttaacacatttgcaaaaagaaaaatttgggca 534  Q
    ||||||||| |||||||| || |||||||| |||||||||| |||||||||| ||||||||||| || |||||||| || ||||||||||||||||||||    
T  37254641 ggcgaccccaggcggtcgcccaggctcgatcgataatttttgcacattagacccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggca 37254740  T
Q  535 atctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcatctc 602  Q
    ||||||||||| |||||| ||||||||| | |||||||||||||||||| ||||||||||||||||||    
T  37254741 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacattattgacgggttcatctc 37254808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 467 - 599
Target Start/End: Complemental strand, 16334012 - 16333879
Alignment:
Q  467 gataattttttcacattagactcaacccaaaagcc-attaacacatttgcaaaaagaaaaatttgggcaatctgaaaattgtcacacacaaataggtttt 565  Q
    |||||||||| ||||||||| |||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| ||    
T  16334012 gataatttttgcacattagattcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtcacacgcaaataggtctt 16333913  T
Q  566 ggaattttatttagcacactattgacgggttcat 599  Q
    |||||||||||||||||||||||||||| |||||    
T  16333912 ggaattttatttagcacactattgacggattcat 16333879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 450 - 602
Target Start/End: Original strand, 33430335 - 33430488
Alignment:
Q  450 gtcgtccgggctcgatagataattttttcacattagactcaacccaaaagcca-ttaacacatttgcaaaaagaaaaatttgggcaatctgaaaattgtc 548  Q
    |||| ||||||||||| |||||||||| | |||||||| |||||||||||||| |||||||| || ||||||||||||||||||||||||||||||| ||    
T  33430335 gtcgcccgggctcgatcgataatttttgcgcattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctc 33430434  T
Q  549 acacacaaataggttttggaattttatttagcacactattgacgggttcatctc 602  Q
    |||| ||||||||| | |||||||||||||||||||||||||||||||||||||    
T  33430435 acacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 33430488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 423 - 586
Target Start/End: Complemental strand, 3155811 - 3155647
Alignment:
Q  423 ggttctaccgtatggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaag-ccattaacacatttgcaaaaag 521  Q
    ||||||| |||||||||| ||||||||||||  ||||||||||  ||||||||| |||||| ||||||||| ||||| ||||||||||||||  ||||||    
T  3155811 ggttctatcgtatggcgatcccgggcggtcgctcgggctcgatcaataatttttgcacattcgactcaacctaaaagtccattaacacatttataaaaag 3155712  T
Q  522 aaaaatttgggcaatctgaaaattgtcacacacaaataggttttggaattttatttagcacacta 586  Q
    |||||||||| |||||||||||||||||||| ||||||| | |||||||||||||||||||||||    
T  3155711 aaaaatttggacaatctgaaaattgtcacacgcaaatagatcttggaattttatttagcacacta 3155647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 436 - 602
Target Start/End: Complemental strand, 31501883 - 31501716
Alignment:
Q  436 ggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagcca-ttaacacatttgcaaaaagaaaaatttgggca 534  Q
    |||||||||||||| | | ||||||||||| |||||||||| |||||||||| |||||||||||||| |||||||| || ||||||||||||||||||||    
T  31501883 ggcgaccccgggcgattgcccgggctcgatcgataatttttgcacattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggca 31501784  T
Q  535 atctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcatctc 602  Q
    ||||||||||| || ||| ||||||||| | | ||||||||||||||||||||||| | |||||||||    
T  31501783 atctgaaaattctcgcacgcaaataggtctcgaaattttatttagcacactattgatgagttcatctc 31501716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 453 - 602
Target Start/End: Original strand, 43068894 - 43069044
Alignment:
Q  453 gtccgggctcgatagataattttttcacattagactcaacccaaaag-ccattaacacatttgcaaaaagaaaaatttgggcaatctgaaaattgtcaca 551  Q
    |||||||||||||  |||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| | |||    
T  43068894 gtccgggctcgatcaataattttttcacattagacccaacccaaaagtccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattcttaca 43068993  T
Q  552 cacaaataggttttggaattttatttagcacactattgacgggttcatctc 602  Q
       ||||| || | |||||||||||||||||||||||| ||| ||||||||    
T  43068994 tgtaaataagtctcggaattttatttagcacactattgccggattcatctc 43069044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 438 - 602
Target Start/End: Original strand, 36291373 - 36291538
Alignment:
Q  438 cgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagc-cattaacacatttgcaaaaagaaaaatttgggcaat 536  Q
    |||| ||||||||||||||||| |||||  ||||||||| |||||||||   |||| |||||  ||||||||||||| ||||||||||||||||||||||    
T  36291373 cgactccgggcggtcgtccgggttcgatcaataatttttgcacattagatctaacctaaaagttcattaacacatttacaaaaagaaaaatttgggcaat 36291472  T
Q  537 ctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcatctc 602  Q
    || |||||| | |||||||||||||| |  |||||||||||| |||||||||||||||||||||||    
T  36291473 ctcaaaattattacacacaaataggtctcagaattttatttaacacactattgacgggttcatctc 36291538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 183 - 340
Target Start/End: Original strand, 26254060 - 26254217
Alignment:
Q  183 ttcacgcactagaaagtgcgacatacctaacatgtgtgatttaaccatagattagagttggaagcttataactagctcgagtatgaaccattgcatctga 282  Q
    ||||||||||||  |||| |||||||||| |  ||| |||| ||||||| || || |||| |||||||| |||  ||||||| | ||||||||||| |||    
T  26254060 ttcacgcactagggagtgtgacatacctagctcgtgagattgaaccatatatcagggttgtaagcttatgactcactcgagtttaaaccattgcatatga 26254159  T
Q  283 attttattctaatttctttaattaattagagataattagggtatgtggttaacttcta 340  Q
    | ||||||||||| |||||||| | ||||||||||||  |||||||||||||||||||    
T  26254160 aatttattctaatctctttaatcagttagagataattgcggtatgtggttaacttcta 26254217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 449 - 561
Target Start/End: Original strand, 28801300 - 28801415
Alignment:
Q  449 ggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagcc-attaacacatttgcaaaaagaaaaatttggg--caatctgaaaatt 545  Q
    ||||| || |||||||| |||||||||| |||||||||  ||| ||||||||| ||||||||| || ||||||||||||||||||   ||| ||||||||    
T  28801300 ggtcgccctggctcgatcgataatttttgcacattagatccaaaccaaaagcccattaacacacttacaaaaagaaaaatttgggaaaaatatgaaaatt 28801399  T
Q  546 gtcacacacaaatagg 561  Q
     |||||| ||||||||    
T  28801400 ctcacacgcaaatagg 28801415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 267 - 334
Target Start/End: Complemental strand, 16810983 - 16810916
Alignment:
Q  267 gaaccattgcatctgaattttattctaatttctttaattaattagagataattagggtatgtggttaa 334  Q
    ||||| || ||| ||| |||||||||||| |||||||||||||||| |||||||||||||||| ||||    
T  16810983 gaaccgttacatatgagttttattctaatgtctttaattaattagaaataattagggtatgtgtttaa 16810916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 417 - 472
Target Start/End: Original strand, 14316639 - 14316694
Alignment:
Q  417 aggggtggttctaccgtatggcgaccccgggcggtcgtccgggctcgatagataat 472  Q
    ||||| |||||||||||||||||| | |||||||||| || |||||||| ||||||    
T  14316639 aggggcggttctaccgtatggcgatctcgggcggtcgcccaggctcgatcgataat 14316694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 142; Significance: 3e-74; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 423 - 599
Target Start/End: Original strand, 35962702 - 35962879
Alignment:
Q  423 ggttctaccgtatggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagcc-attaacacatttgcaaaaag 521  Q
    |||||||||||||||||||||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||  |||||||||||| |||||||    
T  35962702 ggttctaccgtatggcgaccccaggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcttattaacacatttacaaaaag 35962801  T
Q  522 aaaaatttgggcaatctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcat 599  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  35962802 aaaattttgggcaatctgaaaattgtcacacacaaataggtcttggaattttatttagcacactattgacgggttcat 35962879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 423 - 599
Target Start/End: Original strand, 42439973 - 42440150
Alignment:
Q  423 ggttctaccgtatggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagcc-attaacacatttgcaaaaag 521  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||||||||| ||||||||||| |||||||||||| |||||||||||| |||||||    
T  42439973 ggttctaccgtatggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactaaacccaaaagcccattaacacatttacaaaaag 42440072  T
Q  522 aaaaatttgggcaatctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcat 599  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||| |||||    
T  42440073 aaaaatttgggcaatctgaaaattgtcacacgcaaataggtcttgcaattttatttagcacactattgacggattcat 42440150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 423 - 599
Target Start/End: Original strand, 18981604 - 18981780
Alignment:
Q  423 ggttctaccgtatggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaag-ccattaacacatttgcaaaaag 521  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||| |||||| |||||||    
T  18981604 ggttctaccgtatggcgaccc-gggcggtcgtccgggctcgattgataatttttgcacattagactcaacccaaaagtccattaaaacatttacaaaaag 18981702  T
Q  522 aaaaatttgggcaatctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcat 599  Q
    ||||||||||||||| | ||||||||||||| ||||||||| |||||||||||||||||||||| |||||||||||||    
T  18981703 aaaaatttgggcaatttaaaaattgtcacacgcaaataggtcttggaattttatttagcacactgttgacgggttcat 18981780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 423 - 602
Target Start/End: Complemental strand, 41251814 - 41251634
Alignment:
Q  423 ggttctaccgtatggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagcc-attaacacatttgcaaaaag 521  Q
    ||||||||||| | | ||||||||||||||| ||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||| |||||||    
T  41251814 ggttctaccgtgtagtgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaag 41251715  T
Q  522 aaaaatttgggcaatctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcatctc 602  Q
    |||||||||||||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||| | ||||||||    
T  41251714 aaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctc 41251634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 413 - 599
Target Start/End: Complemental strand, 32127331 - 32127144
Alignment:
Q  413 aaccaggggtggttctaccgtatggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagc-cattaacacat 511  Q
    ||||| ||| ||||||| ||||||||||||||||||||||| |||||||||||  ||||||||| ||||||| |||| |||||||||| |||||||||||    
T  32127331 aaccatgggcggttctagcgtatggcgaccccgggcggtcgcccgggctcgatcaataatttttgcacattaaactcgacccaaaagctcattaacacat 32127232  T
Q  512 ttgcaaaaagaaaaatttgggcaatctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcat 599  Q
    || ||||||||||||||| |||||||||||||||||||||| ||||||| | ||||||||||||||||||||||||||||||||||||    
T  32127231 ttacaaaaagaaaaatttaggcaatctgaaaattgtcacacgcaaatagatcttggaattttatttagcacactattgacgggttcat 32127144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 423 - 602
Target Start/End: Complemental strand, 31581802 - 31581622
Alignment:
Q  423 ggttctaccgtatggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagcc-attaacacatttgcaaaaag 521  Q
    |||||||| ||||||||||| |||||||||| || |||||||  |||| ||||| || |||||||||| |||||||||| |||||||||||| |||||||    
T  31581802 ggttctactgtatggcgaccacgggcggtcgcccaggctcgagcgatactttttgcatattagactcatcccaaaagcccattaacacatttacaaaaag 31581703  T
Q  522 aaaaatttgggcaatctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcatctc 602  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  31581702 aaaaatttgggcaatctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatctc 31581622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 423 - 599
Target Start/End: Original strand, 16405587 - 16405764
Alignment:
Q  423 ggttctaccgtatggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagc-cattaacacatttgcaaaaag 521  Q
    ||||||||| ||||| ||||| ||||||||| |||||||| || |||||||||| ||| ||||||||||||||||||| |||||||||||||  ||||||    
T  16405587 ggttctaccatatggtgaccctgggcggtcgcccgggctcaatcgataatttttgcacgttagactcaacccaaaagctcattaacacatttataaaaag 16405686  T
Q  522 aaaaatttgggcaatctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcat 599  Q
    |||||||||| |||||||||||||||||||| |||||| || ||||||||||||||||||||||||||||||||||||    
T  16405687 aaaaatttggacaatctgaaaattgtcacacgcaaataagtcttggaattttatttagcacactattgacgggttcat 16405764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 423 - 602
Target Start/End: Complemental strand, 17445219 - 17445041
Alignment:
Q  423 ggttctaccgtatggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagcc-attaacacatttgcaaaaag 521  Q
    ||||||||||| |||||||| |||||||||| ||| ||||||| |||||||||| |||  ||||||||||||||||||| |||||||||||| |||||||    
T  17445219 ggttctaccgtgtggcgacctcgggcggtcgcccgagctcgatcgataatttttgcac--tagactcaacccaaaagcccattaacacatttacaaaaag 17445122  T
Q  522 aaaaatttgggcaatctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcatctc 602  Q
    |||||||||||||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||| | ||||||||    
T  17445121 aaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctc 17445041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 413 - 602
Target Start/End: Complemental strand, 6403994 - 6403804
Alignment:
Q  413 aaccaggggtggttctaccgtatggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagc-cattaacacat 511  Q
    ||||| ||| ||||| ||||| | ||||||||||||||||| ||||||||||| |||||||||| |||||||||||||||| |||||  |||||||||||    
T  6403994 aaccatgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagttcattaacacat 6403895  T
Q  512 ttgcaaaaagaaaaatttgggcaatctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcatctc 602  Q
    ||  |||||||||||||||||||||||||||||||||||||  |||||||| |||||||||||||| ||||||||||||| | ||||||||    
T  6403894 ttataaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatctc 6403804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 436 - 602
Target Start/End: Original strand, 45418583 - 45418750
Alignment:
Q  436 ggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagcca-ttaacacatttgcaaaaagaaaaatttgggca 534  Q
    |||||||||||||||||| ||||||||||| |||||||||| | |||||||  |||||||||||||| |||||||| || ||||||||||||||||||||    
T  45418583 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcgcattagatccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggca 45418682  T
Q  535 atctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcatctc 602  Q
    ||||||||||| |||||| ||||||||| |  ||||||||||||||||||||||||||||||||||||    
T  45418683 atctgaaaattctcacacgcaaataggtctctgaattttatttagcacactattgacgggttcatctc 45418750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 423 - 572
Target Start/End: Complemental strand, 2958280 - 2958131
Alignment:
Q  423 ggttctaccgtatggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagcc-attaacacatttgcaaaaag 521  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||||||||||||| |||||||||||| |||| ||    
T  2958280 ggttctaccgtatggcgaccccgggcggtcgtccgggctcgatcgataattttg-cacattagactcaacccaaaagcccattaacacatttacaaagag 2958182  T
Q  522 aaaaatttgggcaatctgaaaattgtcacacacaaataggttttggaattt 572  Q
    ||||||||||| ||||||||||||||||||| ||||||||| |||||||||    
T  2958181 aaaaatttgggtaatctgaaaattgtcacacgcaaataggtcttggaattt 2958131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 442 - 601
Target Start/End: Original strand, 771005 - 771165
Alignment:
Q  442 cccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagcc-attaacacatttgcaaaaagaaaaatttgggcaatctga 540  Q
    |||||||||||| ||||||||||| ||||| |||| |||||||||| ||||| ||||||| ||||||||| || ||||||||||||||||||||||||||    
T  771005 cccgggcggtcgcccgggctcgatcgataacttttgcacattagacccaaccaaaaagcccattaacacacttacaaaaagaaaaatttgggcaatctga 771104  T
Q  541 aaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcatct 601  Q
    ||||| |||||| ||||||||| | |||| ||||||||||||| |||||||||||||||||    
T  771105 aaattctcacacgcaaataggtctcggaactttatttagcacattattgacgggttcatct 771165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 436 - 602
Target Start/End: Complemental strand, 44084770 - 44084603
Alignment:
Q  436 ggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagc-cattaacacatttgcaaaaagaaaaatttgggca 534  Q
    ||||||||||||| |||| ||||||||||| |||||||||| ||||||| || ||| |||||||  |||||||||| || ||||||||||||||||||||    
T  44084770 ggcgaccccgggcagtcgcccgggctcgatcgataatttttgcacattaaacccaatccaaaagttcattaacacacttacaaaaagaaaaatttgggca 44084671  T
Q  535 atctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcatctc 602  Q
    ||||||||||| ||| || ||||||||| |  ||||||||||||||||||||||||||||||||||||    
T  44084670 atctgaaaattctcatacgcaaataggtctcagaattttatttagcacactattgacgggttcatctc 44084603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 436 - 601
Target Start/End: Original strand, 8147351 - 8147518
Alignment:
Q  436 ggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaag-ccattaacacatttgcaaaaagaaaaatttgggca 534  Q
    |||||||||||||||||| ||||||||||| |||||| ||| |||||||||| |||| |||||| | ||||||||| || ||||||||||||||||||||    
T  8147351 ggcgaccccgggcggtcgcccgggctcgatcgataatctttgcacattagacccaactcaaaagtcaattaacacacttacaaaaagaaaaatttgggca 8147450  T
Q  535 atctg-aaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcatct 601  Q
    ||||| |||||| |||||| ||||||| | | ||||||||||||| ||||||||||||||||||||||    
T  8147451 atctgaaaaattctcacacgcaaatagatctcggaattttatttaacacactattgacgggttcatct 8147518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 455 - 602
Target Start/End: Complemental strand, 12756985 - 12756837
Alignment:
Q  455 ccgggctcgatagataattttttcacattagactcaacccaaaagcca-ttaacacatttgcaaaaagaaaaatttgggcaatctgaaaattgtcacaca 553  Q
    ||||| ||||| |||||||||| | |||||||| |||||||||||||| |||||||| || |||||||||||||||| |||||||||||||| ||||||     
T  12756985 ccgggttcgatcgataatttttgcgcattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgagcaatctgaaaattctcacacg 12756886  T
Q  554 caaataggttttggaattttatttagcacactattgacgggttcatctc 602  Q
    |||||| || | |||||||||||||||||||||||||||||||||||||    
T  12756885 caaataagtctcggaattttatttagcacactattgacgggttcatctc 12756837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 417 - 599
Target Start/End: Original strand, 2285843 - 2286026
Alignment:
Q  417 aggggtggttctaccgtatggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagcc-attaacacatttgc 515  Q
    ||||| |||||||||| ||||||| | ||| ||||| | | || ||||| |||||||||| ||||||| |  ||||| ||||| | |||||||||||| |    
T  2285843 aggggcggttctaccggatggcgatctcggacggtcattcaggttcgatcgataatttttgcacattaaatccaaccaaaaagtctattaacacatttac 2285942  T
Q  516 aaaaagaaaaatttgggcaatctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcat 599  Q
     ||| |||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  2285943 gaaaggaaaaatttgagcaatctgaaaattgtcacacgcaaataggttttggaattttatttagcacactattgacgtgttcat 2286026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 438 - 599
Target Start/End: Complemental strand, 8059498 - 8059336
Alignment:
Q  438 cgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagcca-ttaacacatttgcaaaaagaaaaatttgggcaat 536  Q
    ||||||||| || ||| || ||||| || |||||||||| ||||||||| ||||||||||||||| |||||||| || ||||||||||||||||| ||||    
T  8059498 cgaccccggccgatcgcccaggctcaatcgataatttttgcacattagagtcaacccaaaagccaattaacacacttacaaaaagaaaaatttggccaat 8059399  T
Q  537 ctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcat 599  Q
     |||||||| |||||||||||| ||| | ||||||||||||||||||| ||||||||||||||    
T  8059398 ttgaaaattctcacacacaaatcggtctcggaattttatttagcacacaattgacgggttcat 8059336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 467 - 602
Target Start/End: Complemental strand, 26162835 - 26162702
Alignment:
Q  467 gataattttttcacattagactcaacccaaaagcc-attaacacatttgcaaaaagaaaaatttgggcaatctgaaaattgtcacacacaaataggtttt 565  Q
    |||||||||| ||||||| | ||||||||||| || ||||||||| || |||||||||||||||||||||||| |||||| ||| |||||||||||| |     
T  26162835 gataatttttacacattaaattcaacccaaaaacccattaacacacttacaaaaagaaaaatttgggcaatctaaaaattctcaaacacaaataggtctc 26162736  T
Q  566 ggaattttatttagcacactattgacgggttcatctc 602  Q
    |||   |||||||||||| ||||||||||||||||||    
T  26162735 gga---ttatttagcacattattgacgggttcatctc 26162702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 416 - 543
Target Start/End: Original strand, 26237937 - 26238065
Alignment:
Q  416 caggggtggttctaccgtatggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaag-ccattaacacatttg 514  Q
    ||||||||||| ||| |   |||||||||||||||||| ||||||||||| ||| |||||| || ||||||  ||| ||||||| ||||||||||| ||     
T  26237937 caggggtggttttacagcccggcgaccccgggcggtcgcccgggctcgatcgat-atttttgcaaattagatgcaaaccaaaagtccattaacacactta 26238035  T
Q  515 caaaaagaaaaatttgggc-aatctgaaaa 543  Q
    ||||||||||||||||||| ||||||||||    
T  26238036 caaaaagaaaaatttgggcaaatctgaaaa 26238065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 445 - 510
Target Start/End: Complemental strand, 7072710 - 7072644
Alignment:
Q  445 gggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaag-ccattaacaca 510  Q
    ||||||||| ||||||||||| ||||||||||| |||||| |||||||||||||| |||||||||||    
T  7072710 gggcggtcgcccgggctcgatcgataatttttttacattaaactcaacccaaaagcccattaacaca 7072644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 416 - 561
Target Start/End: Complemental strand, 4555397 - 4555250
Alignment:
Q  416 caggggtggttctaccgtatggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagc-cattaacacatttg 514  Q
    |||||||||||| ||||   ||||| | |||||||||| | || |||||| |||||||||| ||||| | || |||||||||||| | |||||||| ||     
T  4555397 caggggtggttccaccgcccggcgatctcgggcggtcg-ctggactcgatcgataatttttgcacatcaaacccaacccaaaagctcgttaacacactta 4555299  T
Q  515 caaaaagaaaaatttgggc--aatctgaaaattgtcacacacaaatagg 561  Q
    ||||||||||| |||||||  |||||||||||| ||||||  |||||||    
T  4555298 caaaaagaaaattttgggcaaaatctgaaaattctcacacgtaaatagg 4555250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 436 - 602
Target Start/End: Original strand, 26237957 - 26238110
Alignment:
Q  436 ggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaag-ccattaacacatttgcaaaaagaaaaatttgggca 534  Q
    |||||||||||||||||| ||||||||||| |||| ||||| || ||||||  ||| ||||||| ||||||||||| || ||||||||||||||||||||    
T  26237957 ggcgaccccgggcggtcgcccgggctcgatcgata-tttttgcaaattagatgcaaaccaaaagtccattaacacacttacaaaaagaaaaatttgggca 26238055  T
Q  535 a-tctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcatctc 602  Q
    | |||||||| | ||| ||              | || |||||||||||||||||||||||||||||||    
T  26238056 aatctgaaaactctcagac--------------gtatattatttagcacactattgacgggttcatctc 26238110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 73 - 113
Target Start/End: Original strand, 34077600 - 34077640
Alignment:
Q  73 ttgattagaattctaagatgaatctctatttatttgttgaa 113  Q
    ||||||||| |||||| |||| |||||||||||||||||||    
T  34077600 ttgattagagttctaaaatgagtctctatttatttgttgaa 34077640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 413 - 465
Target Start/End: Original strand, 34523217 - 34523269
Alignment:
Q  413 aaccaggggtggttctaccgtatggcgaccccgggcggtcgtccgggctcgat 465  Q
    ||||||||| |||| |||||   |||||||||||||||||| |||||||||||    
T  34523217 aaccaggggcggttttaccgcccggcgaccccgggcggtcgcccgggctcgat 34523269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 134; Significance: 2e-69; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 423 - 599
Target Start/End: Complemental strand, 34948938 - 34948761
Alignment:
Q  423 ggttctaccgtatggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagcc-attaacacatttgcaaaaag 521  Q
    |||||||||||||||||||||| |||||||| || |||||||| |||||||||| |||||||||||||||||||||||| |||||||||||| |||||||    
T  34948938 ggttctaccgtatggcgaccccaggcggtcgcccaggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaag 34948839  T
Q  522 aaaaatttgggcaatctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcat 599  Q
    ||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||||||||||||||||||||||    
T  34948838 aaaaatttgggcaatctgaaaattgtcacacacaaatagatcttgaaattttatttagcacactattgacgggttcat 34948761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 423 - 599
Target Start/End: Original strand, 13837808 - 13837985
Alignment:
Q  423 ggttctaccgtatggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagc-cattaacacatttgcaaaaag 521  Q
    ||||||||||||||||||||||||||| |||  |||| ||||| ||||||||||  |||||||||||||||||||||| ||| ||||||||| |||||||    
T  13837808 ggttctaccgtatggcgaccccgggcgatcgctcgggttcgatcgataatttttgtacattagactcaacccaaaagcacatcaacacatttacaaaaag 13837907  T
Q  522 aaaaatttgggcaatctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcat 599  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||    
T  13837908 aaaaatttgggcaatctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcat 13837985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 181 - 356
Target Start/End: Complemental strand, 7838292 - 7838117
Alignment:
Q  181 ccttcacgcactagaaagtgcgacatacctaacatgtgtgatttaaccatagattagagttggaagcttataactagctcgagtatgaaccattgcatct 280  Q
    ||||||||||| || |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||| |    
T  7838292 ccttcacgcaccaggaagtgcgacatacctagcatgtgtgatttaaccatagaatagagttggaagcttatgactagctctagtatgaaccattgcatgt 7838193  T
Q  281 gaattttattctaatttctttaattaattagagataattagggtatgtggttaacttctacgcttcatgtttgaaa 356  Q
    ||  ||||  |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  7838192 gatctttaccctaatttctttaatcaattagagaaaattagggtatgtggttaacttctacgcttcatgtttgaaa 7838117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 423 - 602
Target Start/End: Original strand, 398604 - 398784
Alignment:
Q  423 ggttctaccgtatggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagc-cattaacacatttgcaaaaag 521  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||| |||||||||| |||||||||||||||| |||||| |||||||||||||  ||||||    
T  398604 ggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacatttataaaaag 398703  T
Q  522 aaaaatttgggcaatctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcatctc 602  Q
    ||||||||||||||| |||||||||||||||  |||||||| |||||||||||||| ||||||||||||| | ||||||||    
T  398704 aaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatctc 398784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 436 - 602
Target Start/End: Original strand, 28996730 - 28996897
Alignment:
Q  436 ggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagcca-ttaacacatttgcaaaaagaaaaatttgggca 534  Q
    |||||||||||||||||| ||| ||||||| |||||||||| | |||||||| ||||| ||||| || |||||||| || ||||||||||||||||||||    
T  28996730 ggcgaccccgggcggtcgcccgagctcgatcgataatttttgcgcattagacccaacctaaaagtcaattaacacacttacaaaaagaaaaatttgggca 28996829  T
Q  535 atctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcatctc 602  Q
    ||||||||||| |||||| ||||||||| | |||||||||||||||||||||||||||||||||||||    
T  28996830 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 28996897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 436 - 602
Target Start/End: Original strand, 18339106 - 18339273
Alignment:
Q  436 ggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagcca-ttaacacatttgcaaaaagaaaaatttgggca 534  Q
    |||||||||||||||||| |||||||||||  ||||||||| |||||||||| ||| | |||||||| |||||||| || ||||||||||| ||||||||    
T  18339106 ggcgaccccgggcggtcgcccgggctcgatcaataatttttgcacattagacccaatctaaaagccaattaacacacttacaaaaagaaaattttgggca 18339205  T
Q  535 atctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcatctc 602  Q
    ||||||||||| |||||  ||||||||| | |||||||||||||||||||||||||||||||||||||    
T  18339206 atctgaaaattctcacatgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 18339273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 442 - 602
Target Start/End: Original strand, 29743289 - 29743450
Alignment:
Q  442 cccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagc-cattaacacatttgcaaaaagaaaaatttgggcaatctga 540  Q
    |||||||||| | |||||||| || |||||||||| |||||||||| ||||| |||||  ||||||||||||| || |||||||||||||||||||||||    
T  29743289 cccgggcggttgcccgggctcaatcgataatttttgcacattagacccaaccaaaaagttcattaacacatttacagaaagaaaaatttgggcaatctga 29743388  T
Q  541 aaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcatctc 602  Q
    ||||| | |||| ||||||||| | ||||||||||||||||||||| || ||| ||||||||    
T  29743389 aaattcttacacgcaaataggtctcggaattttatttagcacactagtgccggattcatctc 29743450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 455 - 602
Target Start/End: Complemental strand, 33229484 - 33229336
Alignment:
Q  455 ccgggctcgatagataattttttcacattagactcaacccaaaag-ccattaacacatttgcaaaaagaaaaatttgggcaatctgaaaattgtcacaca 553  Q
    ||||||||||| ||| ||||||  ||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| | ||||     
T  33229484 ccgggctcgatcgatcatttttgtacattagacccaacccaaaagtccattaacacatttccaaaaagaaaaatttgggcaatctgaaaattcttacacg 33229385  T
Q  554 caaataggttttggaattttatttagcacactattgacgggttcatctc 602  Q
     ||||| || | || ||||||||||||||||||||| ||| ||||||||    
T  33229384 taaataagtctcgggattttatttagcacactattgccggattcatctc 33229336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 45 - 121
Target Start/End: Complemental strand, 7838428 - 7838352
Alignment:
Q  45 tttgttaccttgagtaattaaaaatttattgattagaattctaagatgaatctctatttatttgttgaatgcaagtc 121  Q
    ||||||| | |||||||||||||||| ||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  7838428 tttgttatcatgagtaattaaaaattcattgattagaattctaaaatgaatttctatttatttgttgaatgcaagtc 7838352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 354 - 415
Target Start/End: Complemental strand, 7838084 - 7838023
Alignment:
Q  354 aaacatgactcgtttgaattacatgtgaaagtctaagtctccactttagtaatgatatcaac 415  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  7838084 aaacatgactcttttgaattacatgtgaaagtctaagtctccactttaataacgatatcaac 7838023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 436 - 531
Target Start/End: Complemental strand, 31028531 - 31028435
Alignment:
Q  436 ggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagc-cattaacacatttgcaaaaagaaaaatttgg 531  Q
    |||||||||| ||||| | |||| |||||| |||||||||| |||||||||  ||||| |||||| ||||||||||||| ||||||| ||| |||||    
T  31028531 ggcgaccccgagcggttgcccggactcgatcgataatttttgcacattagatccaacctaaaagctcattaacacatttacaaaaaggaaattttgg 31028435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 436 - 520
Target Start/End: Complemental strand, 24697984 - 24697899
Alignment:
Q  436 ggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaag-ccattaacacatttgcaaaaa 520  Q
    ||||||||||| |  ||| |||||||| || ||||||||||||||||||| | ||||||||||| ||||||||||| || ||||||    
T  24697984 ggcgaccccggacactcgcccgggctcaatcgataattttttcacattaggcccaacccaaaagcccattaacacacttacaaaaa 24697899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 436 - 472
Target Start/End: Original strand, 13647017 - 13647053
Alignment:
Q  436 ggcgaccccgggcggtcgtccgggctcgatagataat 472  Q
    |||||||||||||||||| ||||||||||| ||||||    
T  13647017 ggcgaccccgggcggtcgcccgggctcgatcgataat 13647053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 133; Significance: 7e-69; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 423 - 602
Target Start/End: Original strand, 25930695 - 25930875
Alignment:
Q  423 ggttctaccgtatggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagcc-attaacacatttgcaaaaag 521  Q
    ||||||||||||||||||||| ||||||||| |||||||||||  ||||||||| ||||||| |||||||||||||||| |||||||||||| |||||||    
T  25930695 ggttctaccgtatggcgaccctgggcggtcgcccgggctcgatctataatttttgcacattaaactcaacccaaaagcccattaacacatttacaaaaag 25930794  T
Q  522 aaaaatttgggcaatctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcatctc 602  Q
    ||||||||||||||| ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  25930795 aaaaatttgggcaatttgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatctc 25930875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 423 - 599
Target Start/End: Complemental strand, 29319885 - 29319708
Alignment:
Q  423 ggttctaccgtatggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagcc-attaacacatttgcaaaaag 521  Q
    ||||||||||||||| |||||| ||||||||||| |||||||| |||||||||| ||||||||||||||||||||| || |||||||||||| |||||||    
T  29319885 ggttctaccgtatggtgacccctggcggtcgtccaggctcgatcgataatttttgcacattagactcaacccaaaatcccattaacacatttacaaaaag 29319786  T
Q  522 aaaaatttgggcaatctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcat 599  Q
    ||||||||| |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  29319785 aaaaatttgagcaatctgaaaattgtcacacacaaataagtcttggaattttatttagcacactattgacgggttcat 29319708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 423 - 602
Target Start/End: Complemental strand, 36382525 - 36382346
Alignment:
Q  423 ggttctaccgtatggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaag-ccattaacacatttgcaaaaag 521  Q
    ||||||||||||||||||||||||||||||| |||||||||||  ||||||||| ||||||| |||||||| ||||| |||||||||||||| ||||| |    
T  36382525 ggttctaccgtatggcgaccccgggcggtcgcccgggctcgatccataatttttgcacattaaactcaaccaaaaagtccattaacacatttacaaaa-g 36382427  T
Q  522 aaaaatttgggcaatctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcatctc 602  Q
    |||||||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  36382426 aaaaatttggacaatctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatctc 36382346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 423 - 602
Target Start/End: Original strand, 20129297 - 20129477
Alignment:
Q  423 ggttctaccgtatggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagcc-attaacacatttgcaaaaag 521  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||| |||||||    
T  20129297 ggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaag 20129396  T
Q  522 aaaaatttgggcaatctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcatctc 602  Q
    |||||||||||||||||||||||||||||||  |||||||| || ||||||||||| ||||||||||||| | ||||||||    
T  20129397 aaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttagaattttatttggcacactattgacagtttcatctc 20129477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 438 - 602
Target Start/End: Complemental strand, 43143749 - 43143584
Alignment:
Q  438 cgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagcca-ttaacacatttgcaaaaagaaaaatttgggcaat 536  Q
    |||||||||||||||| ||||||||||| |||||||||| ||||||||||||||||||||||||| |||||||| || ||||||||||||||||||||||    
T  43143749 cgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaat 43143650  T
Q  537 ctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcatctc 602  Q
    ||||||||| |||||| ||||||||| | ||||||||||||||||||| ||||| |||||||||||    
T  43143649 ctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 43143584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 417 - 599
Target Start/End: Original strand, 40528994 - 40529179
Alignment:
Q  417 aggggtggttctaccgtatggcgaccccgggcg--gtcgtccgggctcgatagataattttttcacattagactcaacccaaaagc-cattaacacattt 513  Q
    ||||| ||||||||||||||||||||| |||||  ||||||||| |||||| |||||||||| ||||||| |||||||| |||| | |||||||||||||    
T  40528994 aggggcggttctaccgtatggcgaccctgggcgaggtcgtccggactcgatcgataatttttgcacattaaactcaacctaaaaactcattaacacattt 40529093  T
Q  514 gcaaaaagaaaaatttgggcaatctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcat 599  Q
     ||||||||||||||||| |||| ||||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||    
T  40529094 acaaaaagaaaaatttggacaatttgaaaattgtcacatgcaaataggtcttggaattttatttagcacactattgacgggttcat 40529179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 439 - 602
Target Start/End: Complemental strand, 3293060 - 3292896
Alignment:
Q  439 gaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagcca-ttaacacatttgcaaaaagaaaaatttgggcaatc 537  Q
    ||||||||||||||| ||||||||||| |||||||||| | |||||||| |||||||||||||| |||||||| || |||||||||||||||||||||||    
T  3293060 gaccccgggcggtcgcccgggctcgatcgataatttttgcccattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatc 3292961  T
Q  538 tgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcatctc 602  Q
    |||||||| |||||| ||||||||| | ||||||||||||||||||||||||||| |||||||||    
T  3292960 tgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcatctc 3292896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 411 - 602
Target Start/End: Original strand, 13012163 - 13012355
Alignment:
Q  411 tcaaccaggggtggttctaccgtatggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagc-cattaacac 509  Q
    ||||||| ||| ||||| ||||| | ||||||||||||||||| ||||||||||| |||||||||| ||||||||| |||||| |||||| |||||||||    
T  13012163 tcaaccatgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagattcaaccaaaaagctcattaacac 13012262  T
Q  510 atttgcaaaaagaaaaatttgggcaatctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcatctc 602  Q
    ||||  ||||||||||||||||||||| |||||||||||||||  |||||||| |||||||||||||| ||||||||||||| | ||||||||    
T  13012263 atttataaaaagaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatctc 13012355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 436 - 602
Target Start/End: Complemental strand, 30216909 - 30216742
Alignment:
Q  436 ggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagcca-ttaacacatttgcaaaaagaaaaatttgggca 534  Q
    |||||||||||||||||| ||||||||||| |||||||||| |||||||||| |||||||||||| | |||||||| || ||||||||||||||||||||    
T  30216909 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacccaaaagctaattaacacacttacaaaaagaaaaatttgggca 30216810  T
Q  535 atctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcatctc 602  Q
    ||||||||||| |||||  ||||||| | | |||||||||||||||||||||||||||||||||||||    
T  30216809 atctgaaaattctcacatgcaaatagatctcggaattttatttagcacactattgacgggttcatctc 30216742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 416 - 602
Target Start/End: Complemental strand, 17511420 - 17511233
Alignment:
Q  416 caggggtggttctaccgtatggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagcc-attaacacatttg 514  Q
    |||||| ||||||||||||||||||||| || |||||| || | |||||| |||||||||| |||||||||||||||||||||||| ||||||||||||     
T  17511420 caggggcggttctaccgtatggcgaccctgg-cggtcgcccagactcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 17511322  T
Q  515 caaaaagaaaaatttgggcaatctgaaaattgtcacacacaaataggttttgg-aattttatttagcacactattgacgggttcatctc 602  Q
    |||||||||||||||||||||| |||||||||| |||| ||||||||| |||| |||||||||||||||| ||||||  ||||||||||    
T  17511321 caaaaagaaaaatttgggcaatttgaaaattgttacacgcaaataggtcttggaaattttatttagcacattattgatcggttcatctc 17511233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 423 - 602
Target Start/End: Complemental strand, 26439459 - 26439279
Alignment:
Q  423 ggttctaccgtatggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagcc-attaacacatttgcaaaaag 521  Q
    ||||| ||||| | ||||||||||||||||| ||||||||| | |||||||||| |||||||||||||||||||||||| ||||||||||||  ||||||    
T  26439459 ggttccaccgtgtagcgaccccgggcggtcgcccgggctcggtcgataatttttgcacattagactcaacccaaaagcccattaacacatttataaaaag 26439360  T
Q  522 aaaaatttgggcaatctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcatctc 602  Q
    |||||||||||||||||||||||||||||||  |||||||| ||| ||||||||||  |||||||||||| | ||||||||    
T  26439359 aaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttgaaattttatttgacacactattgacagtttcatctc 26439279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 423 - 602
Target Start/End: Complemental strand, 34407464 - 34407284
Alignment:
Q  423 ggttctaccgtatggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagcc-attaacacatttgcaaaaag 521  Q
    ||||| ||||| | ||||||||||||||||| ||||||||| | |||||||||| |||||||||||||||||||||||| ||||||||||||  ||||||    
T  34407464 ggttccaccgtgtagcgaccccgggcggtcgcccgggctcggtcgataatttttgcacattagactcaacccaaaagcccattaacacatttataaaaag 34407365  T
Q  522 aaaaatttgggcaatctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcatctc 602  Q
    |||||||||||||||||||||||||||||||  |||||||| ||| ||||||||||  |||||||||||| | ||||||||    
T  34407364 aaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttgaaattttatttgacacactattgacagtttcatctc 34407284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 423 - 602
Target Start/End: Original strand, 47500760 - 47500940
Alignment:
Q  423 ggttctaccgtatggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagc-cattaacacatttgcaaaaag 521  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||| |||||||||| |||||||||||||||| |||||| |||||||||||||   |||||    
T  47500760 ggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacatttatgaaaag 47500859  T
Q  522 aaaaatttgggcaatctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcatctc 602  Q
    ||||||||||||||| |||||||||||||||  |||||||| |||||||||||||| ||||||||||||| | ||||||||    
T  47500860 aaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatctc 47500940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 436 - 602
Target Start/End: Complemental strand, 6690402 - 6690235
Alignment:
Q  436 ggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagcca-ttaacacatttgcaaaaagaaaaatttgggca 534  Q
    |||||||||||||||||| ||||||||||| |||||||||| | |||||||| |||||||||||||| |||||||| || ||||||||||||||||||||    
T  6690402 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcgcattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggca 6690303  T
Q  535 atctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcatctc 602  Q
    | ||||||||| |||||| ||||||||| | | |||||||||||||||||||||||||||||| ||||    
T  6690302 aactgaaaattctcacacgcaaataggtctcgaaattttatttagcacactattgacgggttcgtctc 6690235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 437 - 590
Target Start/End: Complemental strand, 42333942 - 42333788
Alignment:
Q  437 gcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagcca-ttaacacatttgcaaaaagaaaaatttgggcaa 535  Q
    |||| ||||||||||||||||||||| || |||||||||| ||||||||||||||||||||||||| |||||||| || |||||||||||||||||||||    
T  42333942 gcgatcccgggcggtcgtccgggctcaatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaa 42333843  T
Q  536 tctgaaaattgtcacacacaaataggttttggaattttatttagcacactattga 590  Q
    |||||||||| |||||| ||||||||| | ||||||||||||||||||| |||||    
T  42333842 tctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 42333788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 436 - 600
Target Start/End: Complemental strand, 50205244 - 50205079
Alignment:
Q  436 ggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagcca-ttaacacatttgcaaaaagaaaaatttgggca 534  Q
    ||||| |||||||||||| ||| ||||||| |||||||||| |||||||||  |||||||||||||| |||||||| || |||||||||||| |||| ||    
T  50205244 ggcgatcccgggcggtcgcccgagctcgatcgataatttttgcacattagatccaacccaaaagccaattaacacacttacaaaaagaaaaaattggaca 50205145  T
Q  535 atctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcatc 600  Q
    ||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||||||||||||    
T  50205144 atctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatc 50205079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 423 - 602
Target Start/End: Original strand, 43355891 - 43356071
Alignment:
Q  423 ggttctaccgtatggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagcc-attaacacatttgcaaaaag 521  Q
    ||||| ||||| | |||||||| ||| |||| ||||||||| | |||||||||| |||||||||||||||||||||||| ||||||||||||  ||||||    
T  43355891 ggttccaccgtgtagcgaccccaggcagtcgcccgggctcggtcgataatttttgcacattagactcaacccaaaagcccattaacacatttataaaaag 43355990  T
Q  522 aaaaatttgggcaatctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcatctc 602  Q
    |||||||||||||||||||||||||||||||  |||||||| ||| ||||||||||  |||||||||||| | ||||||||    
T  43355991 aaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttgaaattttatttgacacactattgacagtttcatctc 43356071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 438 - 602
Target Start/End: Original strand, 48989330 - 48989495
Alignment:
Q  438 cgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaag-ccattaacacatttgcaaaaagaaaaatttgggcaat 536  Q
    |||| ||||||||||  ||||| ||||| |||||||||| ||||||| || |||| |||||| ||||||||||| || ||||||||||||||||||||||    
T  48989330 cgactccgggcggtcaaccgggttcgatcgataatttttgcacattaaacccaactcaaaagtccattaacacacttacaaaaagaaaaatttgggcaat 48989429  T
Q  537 ctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcatctc 602  Q
    ||||||||| ||| || ||||||||| | |||||||||||||||||||||||||||||||||||||    
T  48989430 ctgaaaattctcatacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 48989495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 491 - 602
Target Start/End: Original strand, 6235575 - 6235687
Alignment:
Q  491 acccaaaag-ccattaacacatttgcaaaaagaaaaatttgggcaatctgaaaattgtcacacacaaataggttttggaattttatttagcacactattg 589  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  6235575 acccaaaagtccattaacacatttacaaaaagaaaaatttgggcaatttgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattg 6235674  T
Q  590 acgggttcatctc 602  Q
    |||||||||||||    
T  6235675 acgggttcatctc 6235687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 436 - 602
Target Start/End: Complemental strand, 10353051 - 10352884
Alignment:
Q  436 ggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaag-ccattaacacatttgcaaaaagaaaaatttgggca 534  Q
    ||||||||| |||||||| |||||||| || |||||||||| |||||||||| ||||| ||||| |||||||||||||| ||||| ||||||||||||||    
T  10353051 ggcgacccctggcggtcgcccgggctcaatcgataatttttgcacattagacccaaccaaaaagtccattaacacatttacaaaaggaaaaatttgggca 10352952  T
Q  535 atctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcatctc 602  Q
    ||||||||||| | |||| ||||||||| | ||||||||||||||||||| | || ||| ||||||||    
T  10352951 atctgaaaattcttacacgcaaataggtctcggaattttatttagcacaccagtgtcggattcatctc 10352884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 442 - 602
Target Start/End: Complemental strand, 29996144 - 29995983
Alignment:
Q  442 cccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaag-ccattaacacatttgcaaaaagaaaaatttgggcaatctga 540  Q
    ||||| ||||||||||| |||||| ||||||||||  ||||||||||||||| ||||| |||||||||||||| | ||||||||||||||||||||||||    
T  29996144 cccggacggtcgtccggactcgatcgataatttttgtacattagactcaaccaaaaagtccattaacacatttacgaaaagaaaaatttgggcaatctga 29996045  T
Q  541 aaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcatctc 602  Q
    ||||| |  ||| ||||||| | | ||||||||||| |||||||||||||||| ||||||||    
T  29996044 aaattcttgcacgcaaatagttctcggaattttattaagcacactattgacggattcatctc 29995983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 467 - 602
Target Start/End: Original strand, 44156682 - 44156818
Alignment:
Q  467 gataattttttcacattagactcaacccaaaagcca-ttaacacatttgcaaaaagaaaaatttgggcaatctgaaaattgtcacacacaaataggtttt 565  Q
    |||||||||| |||||||||| |||||||||||||| |||||||| || ||||||||||| ||||| ||||||||||||| || ||| ||||||||| |     
T  44156682 gataatttttgcacattagacccaacccaaaagccaattaacacacttacaaaaagaaaattttggacaatctgaaaattctctcacgcaaataggtctc 44156781  T
Q  566 ggaattttatttagcacactattgacgggttcatctc 602  Q
    |||||||||||||||||||||||||||||||||||||    
T  44156782 ggaattttatttagcacactattgacgggttcatctc 44156818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 437 - 602
Target Start/End: Complemental strand, 30077797 - 30077631
Alignment:
Q  437 gcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagc-cattaacacatttgcaaaaagaaaaatttgggcaa 535  Q
    |||||| |||||||||| || ||||| || ||||| |||| |||||||||| ||||| |||||  ||||||||||||| ||||||||||||||||| |||    
T  30077797 gcgacctcgggcggtcgcccaggctcaatcgataaattttgcacattagacccaaccaaaaagttcattaacacatttacaaaaagaaaaatttggacaa 30077698  T
Q  536 tctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcatctc 602  Q
    |||||||||| | |||||||||||||| ||| ||||||||||||||||||| || ||| ||||||||    
T  30077697 tctgaaaatttttacacacaaataggtcttgaaattttatttagcacactagtgccggattcatctc 30077631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 436 - 602
Target Start/End: Original strand, 26448053 - 26448219
Alignment:
Q  436 ggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaag-ccattaacacatttgcaaaaagaaaaatttgggca 534  Q
    |||||| ||| ||| |||||||| |||||| |||||||||| ||||||| |   |||||||||| ||||||||||| || |||||| |||||||||||||    
T  26448053 ggcgactccgtgcgatcgtccggactcgatcgataatttttgcacattaaatctaacccaaaagtccattaacacacttacaaaaa-aaaaatttgggca 26448151  T
Q  535 atctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcatctc 602  Q
    ||||||||||| ||| |||||||||||||| |||||||||||||||||||||||| ||| || |||||    
T  26448152 atctgaaaattctcatacacaaataggtttcggaattttatttagcacactattggcggatttatctc 26448219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 439 - 602
Target Start/End: Complemental strand, 28877414 - 28877250
Alignment:
Q  439 gaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagcca-ttaacacatttgcaaaaagaaaaatttgggcaatc 537  Q
    ||||||| |||||||   ||||| ||| |||||||||| ||||||||| |||||| |||||| | |||||||  ||  ||||||||||||||||| ||||    
T  28877414 gaccccgtgcggtcgcttgggctagatcgataatttttgcacattagattcaacctaaaagctaattaacacgcttataaaaagaaaaatttgggaaatc 28877315  T
Q  538 tgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcatctc 602  Q
    | |||||| |||||| ||||||||| | ||||||||||||||||||||||||| |||||||||||    
T  28877314 taaaaattctcacacgcaaataggtctcggaattttatttagcacactattgatgggttcatctc 28877250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 460 - 602
Target Start/End: Original strand, 35545977 - 35546120
Alignment:
Q  460 ctcgatagataattttttcacattagactcaacccaaaagcca-ttaacacatttgcaaaaagaaaaatttgggcaatctgaaaattgtcacacacaaat 558  Q
    |||||| || ||||||| | ||| |||| |||||||||||||| |||||||| || ||||||||||| ||||||||||||||||||| |||||| |||||    
T  35545977 ctcgatcgacaatttttgcgcatcagacccaacccaaaagccaattaacacacttacaaaaagaaaattttgggcaatctgaaaattctcacacgcaaat 35546076  T
Q  559 aggttttggaattttatttagcacactattgacgggttcatctc 602  Q
     ||| |  |||||||||||||||||||||||| |||||||||||    
T  35546077 gggtctctgaattttatttagcacactattgatgggttcatctc 35546120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 471 - 602
Target Start/End: Original strand, 1817752 - 1817884
Alignment:
Q  471 attttttcacattagactcaacccaaaag-ccattaacacatttgcaaaaagaaaaatttgggcaatctgaaaattgtcacacacaaataggttttggaa 569  Q
    |||||| |||||||||  ||| ||||||| ||||||| ||||||  ||||||||||||||||||||||| |||||| | |||| ||||||||| | ||||    
T  1817752 atttttgcacattagatccaatccaaaagtccattaatacatttataaaaagaaaaatttgggcaatctaaaaattcttacacgcaaataggtctcggaa 1817851  T
Q  570 ttttatttagcacactattgacgggttcatctc 602  Q
    ||||||||| |||||||||| ||| ||||||||    
T  1817852 ttttatttaacacactattgtcggattcatctc 1817884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 515 - 590
Target Start/End: Complemental strand, 13392968 - 13392893
Alignment:
Q  515 caaaaagaaaaatttgggcaatctgaaaattgtcacacacaaataggttttggaattttatttagcacactattga 590  Q
    |||||||||||||||||||||||| |||||| |||||| ||||||||| | | |||||||||||||||||||||||    
T  13392968 caaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcgaaattttatttagcacactattga 13392893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 515 - 590
Target Start/End: Complemental strand, 13396107 - 13396032
Alignment:
Q  515 caaaaagaaaaatttgggcaatctgaaaattgtcacacacaaataggttttggaattttatttagcacactattga 590  Q
    |||||||||||||||||||||||| |||||| |||||| ||||||||| | | |||||||||||||||||||||||    
T  13396107 caaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcgaaattttatttagcacactattga 13396032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 448 - 532
Target Start/End: Original strand, 48129978 - 48130063
Alignment:
Q  448 cggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagc-cattaacacatttgcaaaaagaaaaatttggg 532  Q
    |||||| ||||||||||| |||||||||| || ||||||| |||||||||||| |||||||||| || ||||||||||||||||||    
T  48129978 cggtcgaccgggctcgatcgataatttttgcatattagacccaacccaaaagctcattaacacacttacaaaaagaaaaatttggg 48130063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 438 - 561
Target Start/End: Original strand, 30109958 - 30110084
Alignment:
Q  438 cgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaag-ccattaacacatttgcaaaaagaaaaatttgggc--a 534  Q
    ||||||||| |||||| |||| |||||| |||||||||| |||||||||| ||| || |||| ||||||||||| || ||||||||||||||||| |  |    
T  30109958 cgaccccggacggtcgcccggactcgatcgataatttttgcacattagacccaaacccaaagaccattaacacacttacaaaaagaaaaatttggacaaa 30110057  T
Q  535 atctgaaaattgtcacacacaaatagg 561  Q
    || |||||| | |||||| ||||||||    
T  30110058 atatgaaaaatctcacacgcaaatagg 30110084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 413 - 520
Target Start/End: Original strand, 27363338 - 27363446
Alignment:
Q  413 aaccaggggtggttctaccgtatggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaag-ccattaacacat 511  Q
    ||||||||| |||| ||||||||||||||| |||||||||| ||||||||||| ||   ||||| || ||||| | ||||||||||| |||||||||||     
T  27363338 aaccaggggcggttttaccgtatggcgacctcgggcggtcgcccgggctcgatcgaatttttttgcatattaggcccaacccaaaagcccattaacacac 27363437  T
Q  512 ttgcaaaaa 520  Q
    || ||||||    
T  27363438 ttacaaaaa 27363446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 568 - 602
Target Start/End: Original strand, 30110108 - 30110142
Alignment:
Q  568 aattttatttagcacactattgacgggttcatctc 602  Q
    |||||||||||||||||||||||||||||||||||    
T  30110108 aattttatttagcacactattgacgggttcatctc 30110142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 438 - 535
Target Start/End: Original strand, 45194178 - 45194276
Alignment:
Q  438 cgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaag-ccattaacacatttgcaaaaagaaaaatttgggcaa 535  Q
    ||||||| |||| | | |||| ||||||  ||||||||| ||||||| |||||||||||||| ||||||||||| || |||||| ||||  ||||||||    
T  45194178 cgaccccaggcgattgcccggactcgatcaataatttttgcacattaaactcaacccaaaagtccattaacacacttacaaaaaaaaaatattgggcaa 45194276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 568 - 602
Target Start/End: Original strand, 48130111 - 48130145
Alignment:
Q  568 aattttatttagcacactattgacgggttcatctc 602  Q
    |||||||||||||||||||||||||||||||||||    
T  48130111 aattttatttagcacactattgacgggttcatctc 48130145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 461 - 528
Target Start/End: Original strand, 6254569 - 6254637
Alignment:
Q  461 tcgatagataattttttcacattagactcaacccaaaag-ccattaacacatttgcaaaaagaaaaatt 528  Q
    ||||| |||||||||| ||||||| || ||||||||||| | ||||||||| ||||||||| |||||||    
T  6254569 tcgatcgataatttttgcacattaaacccaacccaaaagacaattaacacacttgcaaaaaaaaaaatt 6254637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 280 - 340
Target Start/End: Original strand, 52999105 - 52999165
Alignment:
Q  280 tgaattttattctaatttctttaattaattagagataattagggtatgtggttaacttcta 340  Q
    |||| |||||||| ||||||||||| |||||||||||| |||||||||  || ||||||||    
T  52999105 tgaactttattctcatttctttaataaattagagataactagggtatgcagtgaacttcta 52999165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 436 - 473
Target Start/End: Complemental strand, 49908819 - 49908782
Alignment:
Q  436 ggcgaccccgggcggtcgtccgggctcgatagataatt 473  Q
    |||||||||||||||||| ||||||||||| |||||||    
T  49908819 ggcgaccccgggcggtcgcccgggctcgatcgataatt 49908782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 436 - 476
Target Start/End: Original strand, 7769328 - 7769368
Alignment:
Q  436 ggcgaccccgggcggtcgtccgggctcgatagataattttt 476  Q
    ||||||||| |||||||| ||||||||||| ||||||||||    
T  7769328 ggcgaccccaggcggtcgcccgggctcgatcgataattttt 7769368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 126; Significance: 1e-64; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 423 - 599
Target Start/End: Original strand, 7433432 - 7433609
Alignment:
Q  423 ggttctaccgtatggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagcc-attaacacatttgcaaaaag 521  Q
    |||||||||||||||| |||||||||||||| ||| |||||||  ||||||||| |||||||||||||||||||||||| |||||||||||| |||||||    
T  7433432 ggttctaccgtatggcaaccccgggcggtcgcccgagctcgatctataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaag 7433531  T
Q  522 aaaaatttgggcaatctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcat 599  Q
    |||| |||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  7433532 aaaattttgggcaatctaaaaattgtcacacacaaataggtcttgaaattttatttagcacactattgacgggttcat 7433609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 416 - 602
Target Start/End: Complemental strand, 32982243 - 32982056
Alignment:
Q  416 caggggtggttctaccgtatggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagcc-attaacacatttg 514  Q
    |||||| |||||||||||||||||||||||||||||||  ||||| |||| |||||||||| |||||||||| ||||| ||||||| ||||||| ||||     
T  32982243 cagggggggttctaccgtatggcgaccccgggcggtcgcgcgggcccgatcgataatttttgcacattagacccaacctaaaagcccattaacatattta 32982144  T
Q  515 caaaaagaaaaatttgggcaatctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcatctc 602  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| | ||||||||    
T  32982143 caaaaagaaaaatttggacaatctgaaaattgtcacacacaaataggtcttggaattttatttagcactctattgacagattcatctc 32982056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 416 - 602
Target Start/End: Complemental strand, 42311128 - 42310941
Alignment:
Q  416 caggggtggttctaccgtatggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagcca-ttaacacatttg 514  Q
    |||||| |||||||||||||||||||||| | || ||| ||||||||||| |||||||||| ||||||||||||||||||||||||  |||||||||||     
T  42311128 caggggcggttctaccgtatggcgaccccagacgatcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccgttaacacattta 42311029  T
Q  515 caaaaagaaaaatttgggcaatctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcatctc 602  Q
    |||||||||||||||||||||||||||||||||||||| |||||| || ||| |||||||||||| || |||||||||||||||||||    
T  42311028 caaaaagaaaaatttgggcaatctgaaaattgtcacacgcaaataagtcttgaaattttatttagtacgctattgacgggttcatctc 42310941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 423 - 602
Target Start/End: Original strand, 26144242 - 26144422
Alignment:
Q  423 ggttctaccgtatggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagc-cattaacacatttgcaaaaag 521  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||| |||||||||| |||||||||||||||| |||||| |||||||||||||  ||||||    
T  26144242 ggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacatttataaaaag 26144341  T
Q  522 aaaaatttgggcaatctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcatctc 602  Q
    ||||||||||||||| |||||||||||||||  |||||||| |||||||||||||| ||||||||||||| | ||||||||    
T  26144342 aaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatctc 26144422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 444 - 602
Target Start/End: Complemental strand, 321536 - 321377
Alignment:
Q  444 cgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaag-ccattaacacatttgcaaaaagaaaaatttgggcaatctgaaa 542  Q
    |||||||||||||||||||||| ||||||||||   |||||||  ||||||||||| ||||||||||| || ||||||||||||||||||||||||||||    
T  321536 cgggcggtcgtccgggctcgatcgataatttttgtgcattagatccaacccaaaagtccattaacacagttacaaaaagaaaaatttgggcaatctgaaa 321437  T
Q  543 attgtcacacacaaataggttttggaattttatttagcacactattgacgggttcatctc 602  Q
    ||| ||| |  ||||||||| | ||||||||||||| |||| ||||||||||||||||||    
T  321436 attctcatatgcaaataggtctcggaattttatttaacacattattgacgggttcatctc 321377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 440 - 602
Target Start/End: Original strand, 3828988 - 3829150
Alignment:
Q  440 accccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagc-cattaacacatttgcaaaaagaaaaatttgggcaatct 538  Q
    ||||||| ||||||  |||| ||||| |||||||||| ||||||| || |||||||||||  |||||||||| || ||||||||||||||||||||||||    
T  3828988 accccggacggtcgctcgggttcgatcgataatttttgcacattaaacccaacccaaaagttcattaacacacttacaaaaagaaaaatttgggcaatct 3829087  T
Q  539 gaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcatctc 602  Q
    ||||||| ||| || |||||||| | ||||||||||||||||||||||||||||||||||||||    
T  3829088 gaaaattttcatacgcaaatagg-tctggaattttatttagcacactattgacgggttcatctc 3829150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 436 - 602
Target Start/End: Original strand, 35907552 - 35907719
Alignment:
Q  436 ggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagcca-ttaacacatttgcaaaaagaaaaatttgggca 534  Q
    ||||||| |||||||||| ||||||| ||| |||||||||| |||||||||| |||||||||||||| |||  ||| || ||||||||||| |||||| |    
T  35907552 ggcgacctcgggcggtcgcccgggcttgatcgataatttttgcacattagacccaacccaaaagccaattagtacacttacaaaaagaaaattttgggta 35907651  T
Q  535 atctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcatctc 602  Q
    ||||||||||| |||||| ||||||||| | |||||||||||||||||| |||||||| |||||||||    
T  35907652 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacattattgacgagttcatctc 35907719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 436 - 601
Target Start/End: Original strand, 17445313 - 17445479
Alignment:
Q  436 ggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagcca-ttaacacatttgcaaaaagaaaaatttgggca 534  Q
    |||||||||  ||||||| ||||||| |||  |||||||||  ||||||||  ||||||||||| || |||||||| || ||||||||||||||||||||    
T  17445313 ggcgaccccatgcggtcgcccgggctggatcaataatttttgtacattagatccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggca 17445412  T
Q  535 atctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcatct 601  Q
    ||||||||||| |||||| ||||||||| | |||||||||||||||||| |||||||||||||||||    
T  17445413 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacattattgacgggttcatct 17445479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 423 - 541
Target Start/End: Original strand, 23313225 - 23313345
Alignment:
Q  423 ggttctaccgtatggcgaccccgggcggtcgtccgggctcgatagataatttttt-cacattagactcaacccaaaagc-cattaacacatttgcaaaaa 520  Q
    |||||||||||||||||| | |||||||| | ||||||||||| ||| |||| || |||||||||||||||  |||||  ||||||||||||| ||||||    
T  23313225 ggttctaccgtatggcgatctcgggcggttgcccgggctcgattgatgatttgttgcacattagactcaacataaaagttcattaacacatttacaaaaa 23313324  T
Q  521 gaaaaatttgggcaatctgaa 541  Q
    |||||||||||||||||||||    
T  23313325 gaaaaatttgggcaatctgaa 23313345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 415 - 561
Target Start/End: Complemental strand, 41972462 - 41972314
Alignment:
Q  415 ccaggggtggttctaccgtatggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagcc-attaacacattt 513  Q
    ||||||| ||||| |||||   ||||||||||||||||| || |||||||| |||||||||| |||||||||  ||||| ||||||| ||||||||| ||    
T  41972462 ccaggggcggttccaccgtccagcgaccccgggcggtcg-cctggctcgatcgataatttttgcacattagatccaacctaaaagcctattaacacactt 41972364  T
Q  514 gcaaaaagaaaaatttgg--gcaatctgaaaattgtcacacacaaatagg 561  Q
     |||||||||||||||||    |||||||||||| |||||| ||||||||    
T  41972363 acaaaaagaaaaatttggaaaaaatctgaaaattctcacacgcaaatagg 41972314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 436 - 561
Target Start/End: Original strand, 33489687 - 33489815
Alignment:
Q  436 ggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaag-ccattaacacatttgcaaaaagaaaaatttgggc- 533  Q
    ||||||||||| ||||||| |||| | | | ||||||||||  ||||||||||||| | ||||| ||||||||||| || | |||||||||||||| ||     
T  33489687 ggcgaccccggacggtcgttcgggattgttcgataatttttgtacattagactcaaactaaaagcccattaacacacttactaaaagaaaaatttgagca 33489786  T
Q  534 -aatctgaaaattgtcacacacaaatagg 561  Q
     |||||||||||| |||||| ||||||||    
T  33489787 aaatctgaaaattctcacacgcaaatagg 33489815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 568 - 602
Target Start/End: Original strand, 33489839 - 33489873
Alignment:
Q  568 aattttatttagcacactattgacgggttcatctc 602  Q
    |||||||||||||||||||||||||||||||||||    
T  33489839 aattttatttagcacactattgacgggttcatctc 33489873  T

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Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 568 - 602
Target Start/End: Complemental strand, 41972290 - 41972256
Alignment:
Q  568 aattttatttagcacactattgacgggttcatctc 602  Q
    |||||||||||||||||||||||||||||||||||    
T  41972290 aattttatttagcacactattgacgggttcatctc 41972256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 280 - 333
Target Start/End: Complemental strand, 25795993 - 25795940
Alignment:
Q  280 tgaattttattctaatttctttaattaattagagataattagggtatgtggtta 333  Q
    |||||||||||||||| ||||||||| ||||| ||| |||| ||||||||||||    
T  25795993 tgaattttattctaatgtctttaatttattagggatcattatggtatgtggtta 25795940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 370 - 414
Target Start/End: Complemental strand, 13159072 - 13159028
Alignment:
Q  370 aattacatgtgaaagtctaagtctccactttagtaatgatatcaa 414  Q
    |||||||||||||||| |||||| |||||||| ||| ||||||||    
T  13159072 aattacatgtgaaagtttaagtccccactttaataacgatatcaa 13159028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 125; Significance: 4e-64; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 423 - 602
Target Start/End: Original strand, 19390133 - 19390313
Alignment:
Q  423 ggttctaccgtatggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagcc-attaacacatttgcaaaaag 521  Q
    ||||||||||| ||||||||||||||||||||||||| ||||| |||||||||| |||||||||||||||| ||||| | |||||||||||| |||||||    
T  19390133 ggttctaccgtgtggcgaccccgggcggtcgtccgggttcgatcgataatttttgcacattagactcaacctaaaagtctattaacacatttacaaaaag 19390232  T
Q  522 aaaaatttgggcaatctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcatctc 602  Q
    |||||||||||||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||| | ||||||||    
T  19390233 aaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctc 19390313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 423 - 601
Target Start/End: Complemental strand, 6269606 - 6269427
Alignment:
Q  423 ggttctaccgtatggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagcc-attaacacatttgcaaaaag 521  Q
    ||||||||||| | |||| ||||||||||||||||| |||||| |||||||||| |||||||||||||||||||||||| |||||||||||| |||||||    
T  6269606 ggttctaccgtgtagcgatcccgggcggtcgtccggactcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaag 6269507  T
Q  522 aaaaatttgggcaatctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcatct 601  Q
    |||||||||||||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||| | |||||||    
T  6269506 aaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatct 6269427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 423 - 602
Target Start/End: Complemental strand, 22968624 - 22968444
Alignment:
Q  423 ggttctaccgtatggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagcc-attaacacatttgcaaaaag 521  Q
    ||||||||||| | ||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||||| |||||||||||| |||||||    
T  22968624 ggttctaccgtgtagcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagacttaacccaaaagcccattaacacatttacaaaaag 22968525  T
Q  522 aaaaatttgggcaatctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcatctc 602  Q
    ||||||||||||||||| |||||||||||||  |||||||| ||| |||||||||||||||||||||||| | ||||||||    
T  22968524 aaaaatttgggcaatctaaaaattgtcacacgtaaataggtcttgaaattttatttagcacactattgacagtttcatctc 22968444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 423 - 602
Target Start/End: Complemental strand, 34084302 - 34084122
Alignment:
Q  423 ggttctaccgtatggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaag-ccattaacacatttgcaaaaag 521  Q
    ||||||||||||||||||||||||||||||| |||| |||||| |||||||||| ||||||| | |||||| ||||| |||||||||||||| |||||||    
T  34084302 ggttctaccgtatggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattaaattcaaccaaaaagtccattaacacatttacaaaaag 34084203  T
Q  522 aaaaatttgggcaatctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcatctc 602  Q
    ||||||||||||||| |||||||| |||||| ||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  34084202 aaaaatttgggcaatatgaaaattatcacacgcaaataggtcttggaattttatttagcacactattgatgggttcatctc 34084122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 436 - 602
Target Start/End: Original strand, 45182981 - 45183148
Alignment:
Q  436 ggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagcca-ttaacacatttgcaaaaagaaaaatttgggca 534  Q
    |||||||||||||||||| ||||||||||| |||||||||| | |||||||| |||||||||||||| |||||||| || ||||||||||||||||||||    
T  45182981 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcgcattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggca 45183080  T
Q  535 atctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcatctc 602  Q
    ||||||||||| |||||||||||||||| | |||||||||||||||||||||||||||||||||||||    
T  45183081 atctgaaaattctcacacacaaataggtctcggaattttatttagcacactattgacgggttcatctc 45183148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 436 - 602
Target Start/End: Complemental strand, 11018379 - 11018212
Alignment:
Q  436 ggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagcca-ttaacacatttgcaaaaagaaaaatttgggca 534  Q
    |||||| ||||||||||| || |||||||| |||||||||| ||||||||||||||||||||||||| |||||||| || ||||||||||||||||||||    
T  11018379 ggcgactccgggcggtcgcccaggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggca 11018280  T
Q  535 atctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcatctc 602  Q
    ||||||||||| |||||| ||||||||| |  |||||||||||||||||| |||||||||||||||||    
T  11018279 atctgaaaattctcacacgcaaataggtctcagaattttatttagcacacaattgacgggttcatctc 11018212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 423 - 602
Target Start/End: Original strand, 39771777 - 39771957
Alignment:
Q  423 ggttctaccgtatggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagcc-attaacacatttgcaaaaag 521  Q
    ||||| ||||| | ||||||||||||||||| ||||||||| | |||||||||| |||||||||||||||||||||||| ||||||||||||  ||||||    
T  39771777 ggttccaccgtgtagcgaccccgggcggtcgcccgggctcggtcgataatttttgcacattagactcaacccaaaagcccattaacacatttataaaaag 39771876  T
Q  522 aaaaatttgggcaatctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcatctc 602  Q
    |||||||||||||||||||||||||||||||  |||||||| ||| ||||||||||  |||||||||||| | ||||||||    
T  39771877 aaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttgaaattttatttgacacactattgacagtttcatctc 39771957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 436 - 602
Target Start/End: Complemental strand, 6931061 - 6930894
Alignment:
Q  436 ggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagcca-ttaacacatttgcaaaaagaaaaatttgggca 534  Q
    ||||||||||| |||||| ||||||||||| |||||||||| | |||||||  |||||||||||||| ||||||||||| ||||||||||||||| ||||    
T  6931061 ggcgaccccggacggtcgcccgggctcgatcgataatttttgcgcattagatccaacccaaaagccaattaacacatttacaaaaagaaaaatttaggca 6930962  T
Q  535 atctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcatctc 602  Q
    ||||||||||| |||||| ||||||||| | ||||||||||||||||||||||||||| |||||||||    
T  6930961 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcatctc 6930894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 415 - 602
Target Start/End: Complemental strand, 40081926 - 40081741
Alignment:
Q  415 ccaggggtggttctaccgtatggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagc-cattaacacattt 513  Q
    ||||||| ||||||||||||||||||| | ||  ||||| ||||||||||| ||||||||||  ||||||||||||||| |||||| |||||||||||||    
T  40081926 ccaggggcggttctaccgtatggcgactctgga-ggtcgcccgggctcgatcgataatttttgaacattagactcaacc-aaaagctcattaacacattt 40081829  T
Q  514 gcaaaaagaaaaatttgggcaatctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcatctc 602  Q
     |||||||||||||||||||||| ||||||||||||||| ||||||| | |||| ||||| ||||||||||||||||||||||||||||    
T  40081828 acaaaaagaaaaatttgggcaatttgaaaattgtcacacgcaaatagatcttgg-attttttttagcacactattgacgggttcatctc 40081741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 436 - 602
Target Start/End: Original strand, 33040953 - 33041120
Alignment:
Q  436 ggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagcca-ttaacacatttgcaaaaagaaaaatttgggca 534  Q
    ||||||||||||||||||  |||||||||| |||||||||| || ||||||| |||||||||||| | |||||||| || ||||||||||||||||  ||    
T  33040953 ggcgaccccgggcggtcgctcgggctcgattgataatttttgcatattagacccaacccaaaagctaattaacacacttacaaaaagaaaaatttgaaca 33041052  T
Q  535 atctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcatctc 602  Q
    || |||||||| |||||| ||||||||| | |||||||||||||||||||||||||||||||||||||    
T  33041053 atttgaaaattttcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 33041120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 436 - 602
Target Start/End: Original strand, 45335875 - 45336041
Alignment:
Q  436 ggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagccattaacacatttgcaaaaagaaaaatttgggcaa 535  Q
    ||||||| |||||||||| |||| ||| || |||||||||| |||||||||| ||||| ||||| ||||||||||||| ||||||||||||| |||||||    
T  45335875 ggcgacctcgggcggtcgcccggactcaatcgataatttttacacattagacccaaccaaaaagtcattaacacatttacaaaaagaaaaatctgggcaa 45335974  T
Q  536 tctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcatctc 602  Q
    |||||||||| | |||| ||||||||| ||||||||||||||||||||||| || ||| ||||||||    
T  45335975 tctgaaaattcttacacgcaaataggtcttggaattttatttagcacactagtgccggattcatctc 45336041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 435 - 602
Target Start/End: Original strand, 27935177 - 27935345
Alignment:
Q  435 tggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagc-cattaacacatttgcaaaaagaaaaatttgggc 533  Q
    |||| |||| |||| |||| ||||||||||| |||||||||| ||||||| || |||||||||||| |||||||||| || |||||||||||||||||||    
T  27935177 tggcaaccctgggcagtcgcccgggctcgatcgataatttttgcacattaaacccaacccaaaagctcattaacacacttacaaaaagaaaaatttgggc 27935276  T
Q  534 aatctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcatctc 602  Q
    |||||||||||| ||| ||  |||||||| | |||||||||||||||| ||||||||||||||||||||    
T  27935277 aatctgaaaattctcatacgaaaataggtctcggaattttatttagcatactattgacgggttcatctc 27935345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 436 - 602
Target Start/End: Complemental strand, 6503736 - 6503569
Alignment:
Q  436 ggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagcca-ttaacacatttgcaaaaagaaaaatttgggca 534  Q
    |||||||||||||||||| ||||||||||| ||| |||||| || |||||||||||||||||||||| ||| |||| || |||||||||||||||  |||    
T  6503736 ggcgaccccgggcggtcgcccgggctcgatcgattatttttgcaaattagactcaacccaaaagccaattagcacacttacaaaaagaaaaatttaagca 6503637  T
Q  535 atctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcatctc 602  Q
    ||||||||||| |||||  ||||||||| | ||| ||||||||||||||| ||||| |||||||||||    
T  6503636 atctgaaaattctcacaggcaaataggtctcggatttttatttagcacacaattgatgggttcatctc 6503569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 436 - 586
Target Start/End: Complemental strand, 19565668 - 19565517
Alignment:
Q  436 ggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaag-ccattaacacatttgcaaaaagaaaaatttgggca 534  Q
    ||||| |||||||||||| ||||| || || |||||||||| |||||||||| ||||| ||||  |||||||||||||| ||||||||||||||||| ||    
T  19565668 ggcgatcccgggcggtcgcccgggttcaatcgataatttttgcacattagacccaaccaaaaaatccattaacacatttacaaaaagaaaaatttggaca 19565569  T
Q  535 atctgaaaattgtcacacacaaataggttttggaattttatttagcacacta 586  Q
    ||||||||||| | |||| ||||||||| | |||||||||||||||||||||    
T  19565568 atctgaaaattcttacacgcaaataggtctcggaattttatttagcacacta 19565517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 436 - 602
Target Start/End: Original strand, 35514266 - 35514429
Alignment:
Q  436 ggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaag-ccattaacacatttgcaaaaagaaaaatttgggca 534  Q
    ||||||||||| |||||||||||||||||| |||||||||  || | ||||  ||||||||||| |||||||||||    ||||||||||||||||| ||    
T  35514266 ggcgaccccggacggtcgtccgggctcgatcgataattttcgcatactagatccaacccaaaagtccattaacaca----caaaaagaaaaatttggaca 35514361  T
Q  535 atctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcatctc 602  Q
    || |||||||| |||| | ||||||||| | |||||||||||| ||||||||||||||||||||||||    
T  35514362 atatgaaaattctcactcgcaaataggtctaggaattttattttgcacactattgacgggttcatctc 35514429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 452 - 561
Target Start/End: Original strand, 5135285 - 5135397
Alignment:
Q  452 cgtccgggctcgatagataattttttcacattagactcaacccaaaagc-cattaacacatttgcaaaaagaaaaatttgggc--aatctgaaaattgtc 548  Q
    ||||| |||||||| ||| ||||||  ||||||||| ||||| |||||| |||||||||| || ||||||||||||||||| |  |||| ||||||| ||    
T  5135285 cgtccaggctcgatcgattatttttgtacattagacccaacctaaaagctcattaacacacttacaaaaagaaaaatttggacaaaatccgaaaattctc 5135384  T
Q  549 acacacaaatagg 561  Q
    |||||||||||||    
T  5135385 acacacaaatagg 5135397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 423 - 493
Target Start/End: Original strand, 22922144 - 22922214
Alignment:
Q  423 ggttctaccgtatggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacc 493  Q
    ||||| |||||||||||| ||||||||||||  |||||||||| ||| |||||| ||||||| ||||||||    
T  22922144 ggttccaccgtatggcgatcccgggcggtcgctcgggctcgatcgatcatttttgcacattaaactcaacc 22922214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 554 - 602
Target Start/End: Original strand, 22922214 - 22922262
Alignment:
Q  554 caaataggttttggaattttatttagcacactattgacgggttcatctc 602  Q
    ||||||| | ||||||||||||||| |||||||||||||||||||||||    
T  22922214 caaatagatcttggaattttatttaacacactattgacgggttcatctc 22922262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 568 - 602
Target Start/End: Original strand, 5135421 - 5135455
Alignment:
Q  568 aattttatttagcacactattgacgggttcatctc 602  Q
    |||||||||||||||||||||||||||||||||||    
T  5135421 aattttatttagcacactattgacgggttcatctc 5135455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 436 - 485
Target Start/End: Original strand, 5354709 - 5354758
Alignment:
Q  436 ggcgaccccgggcggtcgtccgggctcgatagataattttttcacattag 485  Q
    |||||||||||||||||| |||||||||||   ||||||| |||||||||    
T  5354709 ggcgaccccgggcggtcgcccgggctcgatccttaattttctcacattag 5354758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 122; Significance: 3e-62; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 414 - 602
Target Start/End: Original strand, 17820 - 18009
Alignment:
Q  414 accaggggtggttctaccgtatggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagcc-attaacacatt 512  Q
    |||| ||| ||||||||||| ||||||||||| ||| ||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||    
T  17820 accatgggcggttctaccgtgtggcgaccccgagcgatcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatt 17919  T
Q  513 tgcaaaaagaaaaatttgggcaatctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcatctc 602  Q
    | |||||||||||||||||||||||||||||||||||||   |||||||| ||| |||||||||||||||||||||||| | ||||||||    
T  17920 tacaaaaagaaaaatttgggcaatctgaaaattgtcacatgtaaataggtcttgaaattttatttagcacactattgacagtttcatctc 18009  T

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Target: scaffold0002 (Bit Score: 109; Significance: 2e-54; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 423 - 602
Target Start/End: Complemental strand, 480637 - 480457
Alignment:
Q  423 ggttctaccgtatggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagc-cattaacacatttgcaaaaag 521  Q
    ||||| ||||| | ||||||||||||||||| ||||||||||| |||||||||| |||||||||||||||| |||||| |||||||||||||  ||||||    
T  480637 ggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacatttataaaaag 480538  T
Q  522 aaaaatttgggcaatctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcatctc 602  Q
    ||||||||||||||| |||||||||||||||  |||||||| |||||||||||||| ||||||||||||| | ||||||||    
T  480537 aaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatctc 480457  T

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Target: scaffold2142 (Bit Score: 107; Significance: 2e-53; HSPs: 1)
Name: scaffold2142
Description:

Target: scaffold2142; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 413 - 602
Target Start/End: Original strand, 499 - 689
Alignment:
Q  413 aaccaggggtggttctaccgtatggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagc-cattaacacat 511  Q
    ||||| ||| ||||| ||||| | |||| |||||||||||| ||||||||||| |||||||||| |||||||||||||||| |||||| |||||||||||    
T  499 aaccatgggcggttccaccgtgtagcgatcccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacat 598  T
Q  512 ttgcaaaaagaaaaatttgggcaatctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcatctc 602  Q
    ||  ||||||||||||||||||||| |||||||||||||||  |||||||| |||||||||||||| ||||||||||||| | ||||||||    
T  599 ttataaaaagaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatctc 689  T

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Target: scaffold0502 (Bit Score: 100; Significance: 4e-49; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 436 - 602
Target Start/End: Original strand, 5230 - 5397
Alignment:
Q  436 ggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagcca-ttaacacatttgcaaaaagaaaaatttgggca 534  Q
    |||||||||||||||||| |||||||||||  ||||||||| |||||||||| ||| | |||||||| |||||||| || ||||||||||| ||||||||    
T  5230 ggcgaccccgggcggtcgcccgggctcgatcaataatttttgcacattagacccaatctaaaagccaattaacacacttacaaaaagaaaattttgggca 5329  T
Q  535 atctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcatctc 602  Q
    ||||||||||| |||||  ||||||||| | |||||||||||||||||||||||||||||||||||||    
T  5330 atctgaaaattctcacatgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 5397  T

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Target: scaffold0041 (Bit Score: 100; Significance: 4e-49; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 452 - 602
Target Start/End: Original strand, 52941 - 53092
Alignment:
Q  452 cgtccgggctcgatagataattttttcacattagactcaacccaaaagcca-ttaacacatttgcaaaaagaaaaatttgggcaatctgaaaattgtcac 550  Q
    |||||||||||||| |||||||||| ||||||||| | ||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||| ||||    
T  52941 cgtccgggctcgatcgataatttttgcacattagatttaacccaaaagccaattaacacatttacaaaaagaaaaatttggacaatctgaaaattctcac 53040  T
Q  551 acacaaataggttttggaattttatttagcacactattgacgggttcatctc 602  Q
    |  ||||||||| | |||||||||||||||||||||||||||||||||||||    
T  53041 atgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 53092  T

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Target: scaffold0154 (Bit Score: 88; Significance: 5e-42; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 436 - 602
Target Start/End: Original strand, 31480 - 31647
Alignment:
Q  436 ggcgaccccgggcggtcgtccgggctcgatagataattttttcacattagactcaacccaaaagcc-attaacacatttgcaaaaagaaaaatttgggca 534  Q
    ||||||||| | |||||| ||||||||||| |||||||||| |||| ||||| ||||||||||||| ||||||||| || ||||||||||||||||| ||    
T  31480 ggcgaccccagacggtcgcccgggctcgatcgataatttttgcacactagacccaacccaaaagcccattaacacacttacaaaaagaaaaatttggaca 31579  T
Q  535 atctgaaaattgtcacacacaaataggttttggaattttatttagcacactattgacgggttcatctc 602  Q
    ||||||||||| |||| | ||||||||| | | |||||||||| ||||||||||||| ||||||||||    
T  31580 atctgaaaattctcactcgcaaataggtctagtaattttattttgcacactattgacaggttcatctc 31647  T

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