View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6469_low_5 (Length: 468)

Name: NF6469_low_5
Description: NF6469
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6469_low_5
NF6469_low_5
[»] chr4 (37 HSPs)
chr4 (18-240)||(51696852-51697071)
chr4 (262-457)||(51696223-51696419)
chr4 (18-162)||(51697845-51697986)
chr4 (18-162)||(31268966-31269103)
chr4 (18-162)||(31273453-31273590)
chr4 (18-162)||(5271445-5271580)
chr4 (18-162)||(16420962-16421098)
chr4 (18-162)||(37264590-37264727)
chr4 (18-162)||(55251653-55251788)
chr4 (18-162)||(37259903-37260040)
chr4 (18-162)||(13522018-13522156)
chr4 (18-162)||(8693643-8693780)
chr4 (18-162)||(12823921-12824058)
chr4 (18-150)||(13059354-13059479)
chr4 (18-144)||(31765832-31765955)
chr4 (28-162)||(32082126-32082253)
chr4 (21-162)||(33469002-33469136)
chr4 (18-162)||(5928245-5928382)
chr4 (18-118)||(19906223-19906320)
chr4 (18-162)||(8030502-8030639)
chr4 (18-108)||(42758781-42758868)
chr4 (18-162)||(19101909-19102046)
chr4 (23-122)||(33463387-33463483)
chr4 (18-162)||(19106551-19106688)
chr4 (25-122)||(47574593-47574687)
chr4 (79-162)||(32221181-32221260)
chr4 (18-115)||(12878214-12878308)
chr4 (44-156)||(47244186-47244291)
chr4 (18-115)||(13065794-13065888)
chr4 (18-116)||(32545068-32545164)
chr4 (17-116)||(2819818-2819914)
chr4 (189-240)||(12752970-12753022)
chr4 (123-163)||(23093111-23093151)
chr4 (105-162)||(55810257-55810310)
chr4 (22-77)||(31729417-31729472)
chr4 (29-115)||(12874514-12874597)
chr4 (28-64)||(33722955-33722991)
[»] chr5 (36 HSPs)
chr5 (18-162)||(10759846-10759986)
chr5 (18-162)||(29167999-29168136)
chr5 (18-162)||(42001366-42001503)
chr5 (18-162)||(12102956-12103094)
chr5 (18-162)||(556627-556764)
chr5 (18-162)||(561399-561536)
chr5 (18-162)||(26667204-26667341)
chr5 (18-162)||(26938801-26938938)
chr5 (18-162)||(37248821-37248958)
chr5 (18-162)||(41996597-41996734)
chr5 (18-162)||(12045165-12045303)
chr5 (18-162)||(39522980-39523118)
chr5 (18-162)||(39518342-39518479)
chr5 (18-162)||(35679901-35680041)
chr5 (18-162)||(7451690-7451827)
chr5 (18-162)||(36423569-36423706)
chr5 (18-162)||(36428641-36428778)
chr5 (18-162)||(37652856-37652993)
chr5 (18-162)||(12501925-12502063)
chr5 (18-162)||(6155445-6155582)
chr5 (18-162)||(41587186-41587323)
chr5 (18-161)||(40147828-40147964)
chr5 (18-144)||(36942291-36942410)
chr5 (18-164)||(6514627-6514766)
chr5 (18-144)||(36937537-36937656)
chr5 (18-162)||(3665863-3666001)
chr5 (23-162)||(11981309-11981442)
chr5 (19-144)||(20181090-20181208)
chr5 (18-108)||(16116275-16116362)
chr5 (18-162)||(32461575-32461700)
chr5 (18-114)||(12102857-12102950)
chr5 (82-162)||(37550089-37550164)
chr5 (166-237)||(7821793-7821866)
chr5 (18-116)||(12041958-12042055)
chr5 (29-76)||(18265541-18265588)
chr5 (87-115)||(9911128-9911156)
[»] chr2 (28 HSPs)
chr2 (18-162)||(25478323-25478464)
chr2 (18-164)||(28603228-28603367)
chr2 (18-162)||(25497351-25497492)
chr2 (18-162)||(1935019-1935156)
chr2 (18-162)||(10160750-10160887)
chr2 (18-162)||(30650861-30650998)
chr2 (18-162)||(9189829-9189966)
chr2 (18-162)||(19892492-19892629)
chr2 (18-162)||(35601854-35601991)
chr2 (18-162)||(9180750-9180887)
chr2 (19-162)||(18344363-18344499)
chr2 (24-162)||(35639029-35639160)
chr2 (18-162)||(31326671-31326808)
chr2 (18-162)||(30658195-30658332)
chr2 (18-162)||(7737877-7738014)
chr2 (18-162)||(29677700-29677836)
chr2 (18-162)||(12796857-12796994)
chr2 (18-162)||(30631511-30631648)
chr2 (18-162)||(29677314-29677450)
chr2 (18-162)||(42926785-42926923)
chr2 (18-163)||(19578440-19578590)
chr2 (79-122)||(15489798-15489841)
chr2 (18-115)||(20711420-20711514)
chr2 (28-114)||(19094531-19094614)
chr2 (45-115)||(17545351-17545419)
chr2 (18-115)||(21523746-21523839)
chr2 (166-240)||(17828866-17828942)
chr2 (79-112)||(40847679-40847712)
[»] chr3 (34 HSPs)
chr3 (18-162)||(7571244-7571381)
chr3 (18-162)||(3672516-3672653)
chr3 (18-162)||(3692548-3692685)
chr3 (18-162)||(8883100-8883237)
chr3 (18-162)||(23666149-23666286)
chr3 (18-162)||(24038397-24038534)
chr3 (18-162)||(39775754-39775891)
chr3 (18-162)||(758394-758531)
chr3 (18-162)||(3033574-3033711)
chr3 (18-156)||(3418931-3419062)
chr3 (17-162)||(29350170-29350308)
chr3 (19-162)||(18467155-18467291)
chr3 (18-162)||(8887860-8887997)
chr3 (18-162)||(29715574-29715711)
chr3 (18-162)||(8069609-8069746)
chr3 (22-162)||(14438725-14438858)
chr3 (18-162)||(49971450-49971587)
chr3 (35-164)||(27708806-27708928)
chr3 (18-162)||(18471938-18472074)
chr3 (18-162)||(55431245-55431382)
chr3 (18-156)||(20519990-20520121)
chr3 (18-144)||(32474706-32474823)
chr3 (79-162)||(23661534-23661613)
chr3 (18-162)||(12965899-12966036)
chr3 (18-161)||(3657266-3657402)
chr3 (18-115)||(12112667-12112761)
chr3 (19-115)||(28125090-28125182)
chr3 (18-114)||(12971659-12971752)
chr3 (45-122)||(2207760-2207834)
chr3 (183-240)||(255045-255102)
chr3 (126-163)||(16013649-16013686)
chr3 (166-240)||(13640176-13640254)
chr3 (170-240)||(13922696-13922767)
chr3 (27-76)||(16983006-16983055)
[»] scaffold0352 (1 HSPs)
scaffold0352 (18-162)||(7036-7173)
[»] scaffold0182 (1 HSPs)
scaffold0182 (18-162)||(9913-10050)
[»] scaffold0002 (2 HSPs)
scaffold0002 (18-162)||(4006-4143)
scaffold0002 (81-162)||(444018-444095)
[»] chr8 (31 HSPs)
chr8 (18-162)||(18876393-18876529)
chr8 (18-162)||(31449892-31450029)
chr8 (18-162)||(33416479-33416616)
chr8 (28-162)||(40130722-40130849)
chr8 (18-162)||(4238341-4238478)
chr8 (18-162)||(4243080-4243217)
chr8 (18-162)||(17025867-17026004)
chr8 (18-162)||(17556359-17556496)
chr8 (18-162)||(34118398-34118535)
chr8 (18-122)||(1807440-1807541)
chr8 (18-162)||(44925949-44926086)
chr8 (18-162)||(28559680-28559817)
chr8 (18-116)||(19166608-19166703)
chr8 (18-115)||(24090602-24090696)
chr8 (18-151)||(38182263-38182388)
chr8 (18-162)||(1910995-1911132)
chr8 (18-109)||(40125911-40125999)
chr8 (82-162)||(19915079-19915155)
chr8 (18-122)||(2355485-2355586)
chr8 (18-114)||(17953899-17953992)
chr8 (18-118)||(36683551-36683648)
chr8 (18-115)||(23548658-23548752)
chr8 (169-240)||(29183289-29183361)
chr8 (18-103)||(2965618-2965699)
chr8 (18-114)||(15875694-15875787)
chr8 (18-108)||(24673351-24673438)
chr8 (169-240)||(8506520-8506592)
chr8 (82-114)||(12820324-12820356)
chr8 (28-76)||(20072109-20072157)
chr8 (19-101)||(28564848-28564927)
chr8 (19-101)||(28572471-28572550)
[»] chr1 (27 HSPs)
chr1 (18-162)||(3094046-3094183)
chr1 (29-162)||(25855103-25855229)
chr1 (22-162)||(10135388-10135521)
chr1 (18-162)||(23192843-23192980)
chr1 (18-162)||(47451251-47451388)
chr1 (18-162)||(51041489-51041624)
chr1 (18-162)||(33301206-33301343)
chr1 (18-162)||(47455412-47455549)
chr1 (20-162)||(40165912-40166047)
chr1 (18-162)||(16649639-16649775)
chr1 (18-162)||(19799039-19799176)
chr1 (18-162)||(26927748-26927885)
chr1 (18-162)||(18784575-18784712)
chr1 (17-162)||(39588392-39588530)
chr1 (81-162)||(25843744-25843821)
chr1 (18-115)||(12259971-12260065)
chr1 (18-162)||(16035534-16035677)
chr1 (44-161)||(16832034-16832144)
chr1 (22-120)||(10140059-10140154)
chr1 (18-162)||(38620625-38620761)
chr1 (18-115)||(8900229-8900323)
chr1 (18-76)||(12906166-12906223)
chr1 (18-76)||(33380947-33381004)
chr1 (28-100)||(2493853-2493923)
chr1 (18-115)||(11806334-11806428)
chr1 (18-76)||(24159825-24159882)
chr1 (166-240)||(248169-248245)
[»] chr7 (25 HSPs)
chr7 (18-162)||(8075981-8076119)
chr7 (18-162)||(4930165-4930302)
chr7 (18-162)||(8268225-8268362)
chr7 (18-157)||(26341136-26341268)
chr7 (18-162)||(9650993-9651131)
chr7 (18-162)||(13314262-13314399)
chr7 (18-162)||(44423163-44423301)
chr7 (18-114)||(4579484-4579577)
chr7 (18-162)||(42627223-42627361)
chr7 (18-122)||(44510703-44510804)
chr7 (19-162)||(30256786-30256922)
chr7 (18-111)||(29150913-29151003)
chr7 (18-114)||(23246959-23247052)
chr7 (18-162)||(27238173-27238311)
chr7 (18-115)||(3357658-3357752)
chr7 (18-79)||(23866076-23866137)
chr7 (18-115)||(12254054-12254148)
chr7 (18-108)||(25543388-25543475)
chr7 (54-115)||(10388427-10388485)
chr7 (79-162)||(26287242-26287333)
chr7 (18-111)||(9008142-9008232)
chr7 (18-107)||(16372381-16372466)
chr7 (18-77)||(15642244-15642303)
chr7 (18-63)||(6591009-6591054)
chr7 (18-62)||(29478181-29478224)
[»] chr6 (27 HSPs)
chr6 (18-162)||(8747714-8747851)
chr6 (18-162)||(6407886-6408023)
chr6 (18-162)||(19674245-19674382)
chr6 (29-162)||(25316603-25316733)
chr6 (29-162)||(26204097-26204227)
chr6 (18-162)||(12688903-12689040)
chr6 (22-156)||(11570779-11570906)
chr6 (18-162)||(33687629-33687766)
chr6 (18-122)||(2700132-2700233)
chr6 (23-163)||(11427974-11428108)
chr6 (48-162)||(11534734-11534841)
chr6 (48-162)||(11560244-11560351)
chr6 (18-162)||(21308966-21309100)
chr6 (28-162)||(13736714-13736854)
chr6 (18-163)||(29892287-29892436)
chr6 (18-111)||(12406379-12406469)
chr6 (99-162)||(17964634-17964693)
chr6 (18-114)||(24589190-24589283)
chr6 (30-76)||(14041703-14041749)
chr6 (123-163)||(22609486-22609526)
chr6 (18-64)||(16836182-16836228)
chr6 (18-76)||(35129640-35129697)
chr6 (82-115)||(11614179-11614212)
chr6 (83-116)||(19995439-19995472)
chr6 (79-107)||(2882839-2882867)
chr6 (166-206)||(17273740-17273780)
chr6 (79-115)||(20748368-20748404)
[»] scaffold0054 (1 HSPs)
scaffold0054 (18-161)||(25332-25468)
[»] scaffold0045 (1 HSPs)
scaffold0045 (18-162)||(82997-83135)
[»] scaffold0012 (1 HSPs)
scaffold0012 (18-162)||(166112-166250)
[»] scaffold0057 (1 HSPs)
scaffold0057 (18-162)||(35566-35703)
[»] scaffold0097 (1 HSPs)
scaffold0097 (18-115)||(15259-15353)
[»] scaffold0018 (1 HSPs)
scaffold0018 (18-76)||(171741-171798)
[»] scaffold0240 (1 HSPs)
scaffold0240 (79-115)||(3966-4002)
[»] scaffold2020 (1 HSPs)
scaffold2020 (18-162)||(289-440)
[»] scaffold0009 (1 HSPs)
scaffold0009 (18-162)||(165055-165206)
[»] scaffold0008 (1 HSPs)
scaffold0008 (18-115)||(255792-255886)


Alignment Details
Target: chr4 (Bit Score: 158; Significance: 7e-84; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 18 - 240
Target Start/End: Complemental strand, 51697071 - 51696852
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||| ||||||||||||| ||||||| || ||||||||||||| |||||||||||||   ||||||||||||||||||||| || | ||||||||    
T  51697071 gatagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaggagagcgacctggt---cgtgactcaacctagtaacaattt-gatagataat 51696976  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaacatgttgagaatgttatgtaattctcgaagaattaatttattttt-aaaggatcc 216  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  51696975 agaatgaatttgaaaatccaaatacaaaagtttggaaatccaaaacatgttgagaatgtaatgtaattctcgaagaattaatttatttttaaaaggatcc 51696876  T
Q  217 ctgaatgatcgctcaaataaagaa 240  Q
    ||||||||||||||||||||||||    
T  51696875 ctgaatgatcgctcaaataaagaa 51696852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 262 - 457
Target Start/End: Complemental strand, 51696419 - 51696223
Alignment:
Q  262 agacctggg-tctcacttagaggctgcacatggaattgtctacttggtttgaactatgaaccacatttggaatttagtgcctacaacgtttgggaatgag 360  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| |||    
T  51696419 agacctgggctctcacttagaggctgcacatggaattgtctacttggtttgaactttgaaccccatttggaatttagtgcctacaacgtttgggaacgag 51696320  T
Q  361 atcatcgatatagannnnnnnnnagacggggtcggtataatggctttttagatgaaagggacaaatcattaatccattggtcgtgccttctcccttt 457  Q
    ||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51696319 atcatcgatatagatttttttttagacggggtcggtataatggctttttagatgaaagggacaaatcattaatccattggtcgtgccttctcccttt 51696223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 51697986 - 51697845
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||| |||||||||||||  ||||||||| |||||||||||| |||||||| |||||   |||||||||||||||||||||||||||||||||||    
T  51697986 gatagtctgccttgcacaattttgagcagtgtcatgaaacgtcttaaaaagagcgatctggt---cgtgactcaacctagtaacaacttcggtagataat 51697890  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||    
T  51697889 agaatgaatttggaaatccaaatacaatagtttgaaaatccaaaa 51697845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 31269103 - 31268966
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||| ||||||||||||||||||||| |||||||||||||||  |||||||||   |||||||||||||||||||||||||||||||||||||||    
T  31269103 gatagtctgccttgcacaattttaggcagtgccacgaaacgtcttaaagagagcgacc---tggtcgtgactcaacctagtaacaacttcggtagataat 31269007  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |    |||||||||||||||||||||| ||||||||||| |||||    
T  31269006 a----gaatttggaaatccaaatacaacagtttggaaattcaaaa 31268966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 31273590 - 31273453
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||||  |||||||||   |||||||||||||||||||||||||||||||||||||||    
T  31273590 gatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacc---tggtcgtgactcaacctagtaacaacttcggtagataat 31273494  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |    |||||||||||||||||||||| ||||||||||| |||||    
T  31273493 a----gaatttggaaatccaaatacaacagtttggaaattcaaaa 31273453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 5271445 - 5271580
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||||  |||||||||   |||||||||||||||||||||||||||||||||||||||    
T  5271445 gatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacc---tggtcgtgactcaacctagtaacaacttcggtagataat 5271541  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |    |||||||||||| |||||  || |||||||||||||||||    
T  5271542 a----gaatttggaaattcaaat--aacagtttggaaatccaaaa 5271580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 16421098 - 16420962
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||| ||||||||||||| ||||||| ||||||| |||||||  |||||||||||||   |||||||||||||||||||||||||||||||||||    
T  16421098 gatagtctgccttgcacaattttgggcagtgccacgaaatgtcttaatgagagcgacctggt---cgtgactcaacctagtaacaacttcggtagataat 16421002  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    ||||     ||||||||| |||||||| |||||||||||||||||    
T  16421001 agaa-----ttggaaatctaaatacaacagtttggaaatccaaaa 16420962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 37264590 - 37264727
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||| |||||| |||||| ||||||| |||||||||||||||  |||||||||||||   |||||||||||||||||||||||||| ||||||||    
T  37264590 gatagtctgccttgcataattttgggcagtgccacgaaacgtcttaaagagagcgacctggt---cgtgactcaacctagtaacaacttcgatagataat 37264686  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |    |||||||||||||||||||||| ||||||||||| |||||    
T  37264687 a----gaatttggaaatccaaatacaacagtttggaaattcaaaa 37264727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 55251788 - 55251653
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||||||||||||||||| | ||||| ||||||||||||||| ||||||||||||||   |||||||||||||||||||||||||  ||||||||    
T  55251788 gatagtctgtcttgcacaattttggacagtgccacgaaacgtcttaa-aagagcgacctggt---cgtgactcaacctagtaacaacttcaatagataat 55251693  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    ||||     |||||||||||||||||| |||||||||||| ||||    
T  55251692 agaa-----ttggaaatccaaatacaacagtttggaaatcgaaaa 55251653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 37259903 - 37260040
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||| |||||||||||||  | |||| |||||||||||||||  | |||||||||||   |||||||||||||||||||||||||||||||||||    
T  37259903 gatagtctgccttgcacaattttgagtagtgccacgaaacgtcttaaagaaagcgacctggt---cgtgactcaacctagtaacaacttcggtagataat 37259999  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |    |||||||||||||||||||||| ||||||||||| |||||    
T  37260000 a----gaatttggaaatccaaatacaacagtttggaaattcaaaa 37260040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 13522018 - 13522156
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||||  |||||||||   ||||||||||||||||||||||||||||||||||| ||     
T  13522018 gatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacc---tggtcgtgactcaacctagtaacaacttcggtagaaaac 13522114  T
Q  118 agaatgaatttggaaatcc-aaatacaaaagtttggaaatccaaaa 162  Q
    |    ||||||||||| || |||||||| |||||| ||||||||||    
T  13522115 a----gaatttggaaaaccaaaatacaacagtttgaaaatccaaaa 13522156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 8693780 - 8693643
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    |||||| |||||||||||||||| || || | |||||||||||||||  |||||||||||||   |||||||||||||||||||||||||| |||| |||    
T  8693780 gatagtatgtcttgcacaattttgggtagcgccacgaaacgtcttaaagagagcgacctggt---cgtgactcaacctagtaacaacttcgatagacaat 8693684  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |    |||||||||||||||||||||| |||||| ||||||||||    
T  8693683 a----gaatttggaaatccaaatacaacagtttgaaaatccaaaa 8693643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 12823921 - 12824058
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    |||||| |||||||||||||||| ||||||| ||||||| |||||||  |||||||||   ||||| |||||||||||| |||||||||||||||| |||    
T  12823921 gatagtttgtcttgcacaattttgggcagtgccacgaaatgtcttaaagagagcgacc---tggtcatgactcaacctaataacaacttcggtagaaaat 12824017  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |    |||||||||||||||||||||| ||||| |||||| ||||    
T  12824018 a----gaatttggaaatccaaatacaacagtttagaaatcaaaaa 12824058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 18 - 150
Target Start/End: Complemental strand, 13059479 - 13059354
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||  ||||||| |   ||||| |||||||||||||||| ||||||||||||||||    
T  13059479 gatagtctgtcttgcacaattttatgcagtgccacgaaacgtcttaaagagagcgatc---tggtcatgactcaacctagtaataacttcggtagataat 13059383  T
Q  118 agaatgaatttggaaatccaaatacaaaagttt 150  Q
    |    ||||||| |||||||||||||| |||||    
T  13059382 a----gaatttgaaaatccaaatacaacagttt 13059354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 18 - 144
Target Start/End: Complemental strand, 31765955 - 31765832
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||| ||||||||||||| ||||||| |||||||||||||||  |||| |||||||| ||   ||||||||||||||||||||||||||||||||    
T  31765955 gatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagtgacctggttgt---gactcaacctagtaacaacttcggtagataat 31765859  T
Q  118 agaatgaatttggaaatccaaatacaa 144  Q
      |  ||||||||||||||||| ||||    
T  31765858 taatagaatttggaaatccaaaaacaa 31765832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 28 - 162
Target Start/End: Original strand, 32082126 - 32082253
Alignment:
Q  28 cttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataatagaatgaatt 127  Q
    ||||||||||||| | ||||| || |||| ||||||| ||||| || |||||   |||||||||||||||||||||||||||| |||||||    |||||    
T  32082126 cttgcacaattttggacagtgccatgaaatgtcttaaaaagagtgatctggt---cgtgactcaacctagtaacaacttcggttgataata----gaatt 32082218  T
Q  128 tggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    ||||||||||||||||| |||||||||||||||||    
T  32082219 tggaaatccaaatacaacagtttggaaatccaaaa 32082253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 21 - 162
Target Start/End: Original strand, 33469002 - 33469136
Alignment:
Q  21 agtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataataga 120  Q
    |||||| ||||||||| ||| ||||||| ||| |||||||||||  ||| |||||| ||   ||||||||||||||||||||||||| ||||||||||      
T  33469002 agtctgccttgcacaactttgggcagtgccacaaaacgtcttaaagagaacgacctagt---cgtgactcaacctagtaacaacttcagtagataata-- 33469096  T
Q  121 atgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
      ||||||| |||||||||||||| |||||||||||||||||    
T  33469097 --gaatttgaaaatccaaatacaacagtttggaaatccaaaa 33469136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 5928245 - 5928382
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||| |||||||||||||  |||||| ||| |||| ||||||  |||||||||||||   ||||||||||||| |||||||||||||||||||||    
T  5928245 gatagtctgccttgcacaattttgagcagtgccactaaacatcttaaagagagcgacctggt---cgtgactcaacctggtaacaacttcggtagataat 5928341  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |    ||||||| || ||||||||||| |||||||||||| ||||    
T  5928342 a----gaatttgaaactccaaatacaacagtttggaaatctaaaa 5928382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 18 - 118
Target Start/End: Complemental strand, 19906320 - 19906223
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||||||||||||||||||| |||||||||  |||||||||| ||||||||||   || ||||||||||||||| ||| ||||||||||||||||    
T  19906320 gatagtctgtcttgcacaattttagacagtgtcactgaacgtcttaaaaagagcgacc---tgatcgtgactcaacctaataataacttcggtagataat 19906224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 8030502 - 8030639
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    |||||||| |||||||||||||| ||||||| ||| |||||||||||  |||||||||   || | |||| |||||||||||||||||||||||||||||    
T  8030502 gatagtctatcttgcacaattttgggcagtgccacaaaacgtcttaaagagagcgacc---tgattgtgattcaacctagtaacaacttcggtagataat 8030598  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |    ||||||| |||| ||||||||| |||||| |||| |||||    
T  8030599 a----gaatttgaaaattcaaatacaacagtttgaaaattcaaaa 8030639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 18 - 108
Target Start/End: Original strand, 42758781 - 42758868
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcg 108  Q
    ||||||||||||||||||||||| ||||||| |||||||| ||||||  |||||||||   ||||||||||||||||||||||||||||||    
T  42758781 gatagtctgtcttgcacaattttgggcagtgccacgaaacatcttaaagagagcgacc---tggtcgtgactcaacctagtaacaacttcg 42758868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 19102046 - 19101909
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    |||||||||| ||||||||||||  | |||| |||||||||||||||  |||| ||||| ||   ||||||| |||||||||||||||| | ||||||||    
T  19102046 gatagtctgttttgcacaattttgagtagtgccacgaaacgtcttaaacagagtgacctcgt---cgtgacttaacctagtaacaactttgatagataat 19101950  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |    |||||||||||||||||||||| |||||  ||||||||||    
T  19101949 a----gaatttggaaatccaaatacaacagtttataaatccaaaa 19101909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 23 - 122
Target Start/End: Original strand, 33463387 - 33463483
Alignment:
Q  23 tctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataatagaat 122  Q
    |||| ||||||||| ||| | ||||| |||||||||||||||  |||||||||||||   |||||||||||||||||||||||||| |||||||||||||    
T  33463387 tctgccttgcacaactttggacagtgccacgaaacgtcttaaagagagcgacctggt---cgtgactcaacctagtaacaacttcgatagataatagaat 33463483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 19106688 - 19106551
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||| | ||||||||||||| |||||||  | ||||||||||||  | ||||| ||| | ||   ||||||||||||||||||||||||||||||||    
T  19106688 gatagtcagccttgcacaattttgggcagtgctatgaaacgtcttaaagaaagcgatctgcttgt---gactcaacctagtaacaacttcggtagataat 19106592  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |    |||||||||||||||||||||  | |||| ||||||||||    
T  19106591 a----gaatttggaaatccaaatacagcaatttgaaaatccaaaa 19106551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 25 - 122
Target Start/End: Complemental strand, 47574687 - 47574593
Alignment:
Q  25 tgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataatagaat 122  Q
    |||||||||||||||| || ||||||| ||||||||||||  |||||||||   || | ||||||||||||| |||||| ||||||||||||||||||    
T  47574687 tgtcttgcacaattttgggtagtgtcaagaaacgtcttaaagagagcgacc---tgattgtgactcaacctaataacaaattcggtagataatagaat 47574593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 79 - 162
Target Start/End: Original strand, 32221181 - 32221260
Alignment:
Q  79 tggtcgtgactcaacctagtaacaacttcggtagataatagaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    ||||||||||||||||||||||||| ||||||||||||||    ||||||| |||||||||||||| | |||| ||||||||||    
T  32221181 tggtcgtgactcaacctagtaacaatttcggtagataata----gaatttgaaaatccaaatacaacaatttgaaaatccaaaa 32221260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 18 - 115
Target Start/End: Complemental strand, 12878308 - 12878214
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagata 115  Q
    |||||||||  ||||||||||||    ||||||||||||||||||||  ||||||||||| |   ||||||||||||||||||||||||| |||||||    
T  12878308 gatagtctgctttgcacaattttgaaaagtgtcacgaaacgtcttaaagagagcgacctgat---cgtgactcaacctagtaacaacttccgtagata 12878214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 44 - 156
Target Start/End: Complemental strand, 47244291 - 47244186
Alignment:
Q  44 cagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataatagaatgaatttggaaatccaaataca 143  Q
    ||||| |||||||||||||||  || |||||||| |   |||||||||||||| ||||||||||| |||||||||     ||||||||||||||||||||    
T  47244291 cagtgccacgaaacgtcttaaagagggcgacctgat---cgtgactcaacctactaacaacttcgatagataata----taatttggaaatccaaataca 47244199  T
Q  144 aaagtttggaaat 156  Q
    | ||||| |||||    
T  47244198 acagtttagaaat 47244186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 115
Target Start/End: Original strand, 13065794 - 13065888
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagata 115  Q
    ||||||||  ||| ||||| ||| ||||||| || ||||||||||||  ||||||||    | |||||||||||||||||||||||||||||||||||    
T  13065794 gatagtctccctttcacaactttgggcagtgccatgaaacgtcttaaagagagcgac---atagtcgtgactcaacctagtaacaacttcggtagata 13065888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 32545164 - 32545068
Alignment:
Q  18 gatagtctgtcttg-cacaatttt-aggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagata 115  Q
    |||||||||||||| ||||||||| |||| ||| |||||||| |||||| ||||  |||||| |   ||||||||||||||||||||||||| |||||||    
T  32545164 gatagtctgtcttgacacaatttttaggcggtgccacgaaacatcttaa-aagattgacctgat---cgtgactcaacctagtaacaacttcagtagata 32545069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 17 - 116
Target Start/End: Complemental strand, 2819914 - 2819818
Alignment:
Q  17 agatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataa 116  Q
    |||||||||  ||||||||||||| | ||||  |||||||| ||||||  | | |||||   |||||||||||||| ||||||||||||||| |||||||    
T  2819914 agatagtctaccttgcacaattttggacagtaccacgaaacatcttaaagaaaacgacc---tggtcgtgactcaatctagtaacaacttcgatagataa 2819818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 189 - 240
Target Start/End: Complemental strand, 12753022 - 12752970
Alignment:
Q  189 gaagaattaatttatt-tttaaaggatccctgaatgatcgctcaaataaagaa 240  Q
    ||||||||||||| || ||| ||||||||||||| ||||||||||||||||||    
T  12753022 gaagaattaatttgttattttaaggatccctgaaggatcgctcaaataaagaa 12752970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 23093151 - 23093111
Alignment:
Q  123 gaatttggaaatccaaatacaaaagtttggaaatccaaaac 163  Q
    |||||||||||||||||||||| ||||| ||||||||||||    
T  23093151 gaatttggaaatccaaatacaacagttttgaaatccaaaac 23093111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 105 - 162
Target Start/End: Original strand, 55810257 - 55810310
Alignment:
Q  105 ttcggtagataatagaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    ||||||||||||||||||    |||||||||||||||||| |||||| ||||||||||    
T  55810257 ttcggtagataatagaat----ttggaaatccaaatacaacagtttgaaaatccaaaa 55810310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 22 - 77
Target Start/End: Original strand, 31729417 - 31729472
Alignment:
Q  22 gtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctg 77  Q
    ||||| ||||||||||||| || |||| |||||||||||||||  |||||||||||    
T  31729417 gtctgccttgcacaattttgggtagtgccacgaaacgtcttaaagagagcgacctg 31729472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 29 - 115
Target Start/End: Complemental strand, 12874597 - 12874514
Alignment:
Q  29 ttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagata 115  Q
    |||||||||||||| ||||| ||||||  |||||||  ||||||| |   || | ||||||||||||| |||||||||| |||||||    
T  12874597 ttgcacaattttagacagtgccacgaattgtcttaaagagagcgatc---tgattgtgactcaacctaataacaacttcagtagata 12874514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 28 - 64
Target Start/End: Original strand, 33722955 - 33722991
Alignment:
Q  28 cttgcacaattttaggcagtgtcacgaaacgtcttaa 64  Q
    ||||||||||||| | |||||||||||||||||||||    
T  33722955 cttgcacaattttggacagtgtcacgaaacgtcttaa 33722991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 103; Significance: 5e-51; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 10759846 - 10759986
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||| ||||||||||||| ||||||| ||| ||||||||||| ||||||||||||||   |||||||||||||||||||||||||||||||||||    
T  10759846 gatagtctgccttgcacaattttgggcagtgccacaaaacgtcttaa-aagagcgacctggt---cgtgactcaacctagtaacaacttcggtagataat 10759941  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    ||||||||||||||||||||||||||| |||||||||||||||||    
T  10759942 agaatgaatttggaaatccaaatacaacagtttggaaatccaaaa 10759986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 29167999 - 29168136
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||| ||||||||||||| ||||||| |||||||||||||||  |||||||||||||   |||||||||||||||||||||||||||||||||||    
T  29167999 gatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggt---cgtgactcaacctagtaacaacttcggtagataat 29168095  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |    |||||||||||| ||||||||| |||||||||||||||||    
T  29168096 a----gaatttggaaattcaaatacaacagtttggaaatccaaaa 29168136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 42001503 - 42001366
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||||||| ||||||||| ||||||| |||||||||||||||  |||||||||||||   |||||||||||||||||||||||||||||||||||    
T  42001503 gatagtctgtcttacacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggt---cgtgactcaacctagtaacaacttcggtagataat 42001407  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |    ||||||||||||||||||||||  ||||||||||||||||    
T  42001406 a----gaatttggaaatccaaatacaactgtttggaaatccaaaa 42001366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 12103094 - 12102956
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||| ||||||||||||| ||||||| |||||||||||||||  |||||||||   ||||||| |||||||||||||||||||||||||||||||    
T  12103094 gatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacc---tggtcgtaactcaacctagtaacaacttcggtagataat 12102998  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |||||   || |||||||||||||||| |||||||||||||||||    
T  12102997 agaat---ttgggaaatccaaatacaacagtttggaaatccaaaa 12102956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 556764 - 556627
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||| ||||||||||||| ||||||| ||| |||||||||||  |||||||||||||   |||||||||||||||||||||||||||||||||||    
T  556764 gatagtctgccttgcacaattttgggcagtgccacaaaacgtcttaaagagagcgacctggt---cgtgactcaacctagtaacaacttcggtagataat 556668  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |    ||||||||||||||||||||||  ||||||||||||||||    
T  556667 a----gaatttggaaatccaaatacaactgtttggaaatccaaaa 556627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 561536 - 561399
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||| ||||||||||||| ||||||| ||| |||||||||||  |||||||||||||   |||||||||||||||||||||||||||||||||||    
T  561536 gatagtctgccttgcacaattttgggcagtgccacaaaacgtcttaaagagagcgacctggt---cgtgactcaacctagtaacaacttcggtagataat 561440  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |    ||||||||||||||||||||||  ||||||||||||||||    
T  561439 a----gaatttggaaatccaaatacaactgtttggaaatccaaaa 561399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 26667341 - 26667204
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||| ||||||||||||| ||||||| |||||||||||||||  |||||||||||||   |||||||||||||||||||||||||||||||||||    
T  26667341 gatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggt---cgtgactcaacctagtaacaacttcggtagataat 26667245  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |    |||||||||| ||||||||||| |||||||||||| ||||    
T  26667244 a----gaatttggaactccaaatacaatagtttggaaatctaaaa 26667204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 26938938 - 26938801
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||| ||||||||||||| ||||||| |||||||||||||||  |||||||||||||   |||||||||||||||||||||||||||||||||||    
T  26938938 gatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggt---cgtgactcaacctagtaacaacttcggtagataat 26938842  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |    |||||||||| ||||||||||| |||||||||||| ||||    
T  26938841 a----gaatttggaactccaaatacaatagtttggaaatctaaaa 26938801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 37248821 - 37248958
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||| |||||||||||||||| |||| ||||||| |||||||  |||||||||||||   |||||||||||||||||||||||||||||||||||    
T  37248821 gatagtctgccttgcacaattttaggtagtgccacgaaatgtcttaaagagagcgacctggt---cgtgactcaacctagtaacaacttcggtagataat 37248917  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |    ||||||||||||||||||| || |||||||||||||||||    
T  37248918 a----gaatttggaaatccaaatataacagtttggaaatccaaaa 37248958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 41996734 - 41996597
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||||||| ||||||||| ||||||| |||||||||||||||  ||||| |||||||   |||||||||||||||||||||||||||||||||||    
T  41996734 gatagtctgtcttacacaattttgggcagtgccacgaaacgtcttaaagagagcaacctggt---cgtgactcaacctagtaacaacttcggtagataat 41996638  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |    ||||||||||||||||||||||  ||||||||||||||||    
T  41996637 a----gaatttggaaatccaaatacaactgtttggaaatccaaaa 41996597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 12045165 - 12045303
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||||  || ||||||||||   |||||||||||||||||||||||||||||||||||    
T  12045165 gatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagggcgacctggt---cgtgactcaacctagtaacaacttcggtagataat 12045261  T
Q  118 agaatgaatttggaaatcc-aaatacaaaagtttggaaatccaaaa 162  Q
    |    ||||||||||| || |||||||| |||||||||||||||||    
T  12045262 a----gaatttggaaaaccaaaatacaacagtttggaaatccaaaa 12045303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 39523118 - 39522980
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||||||||||||||||| ||| ||| |||||||||||||||  |||||||||   |||||||||||||||||||||||||||||| ||||||||    
T  39523118 gatagtctgtcttgcacaattttgggcggtgccacgaaacgtcttaaagagagcgacc---tggtcgtgactcaacctagtaacaacttcgatagataat 39523022  T
Q  118 agaatgaatttggaaatccaaatac-aaaagtttggaaatccaaaa 162  Q
    |    |||||||||||||||||||| || |||||||||||||||||    
T  39523021 a----gaatttggaaatccaaatactaacagtttggaaatccaaaa 39522980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 39518479 - 39518342
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||| | ||||||||||| ||| ||| |||||||||||||||  |||||||||||||   |||||||||||||||||||||||||| ||||||||    
T  39518479 gatagtctgccatgcacaattttgggcggtgccacgaaacgtcttaaagagagcgacctggt---cgtgactcaacctagtaacaacttcgatagataat 39518383  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |    |||||||||||||||||||||| |||||||||||||||||    
T  39518382 a----gaatttggaaatccaaatacaacagtttggaaatccaaaa 39518342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 35679901 - 35680041
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||| ||||||||||||| | ||||| |||||||||||||||  |||||||||||     | |||||||||||||||||| ||||||||||||||    
T  35679901 gatagtctgccttgcacaatttttgacagtgccacgaaacgtcttaaagagagcgacctgc----catgactcaacctagtaacagcttcggtagataat 35679996  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    | ||||||||||||||||||||||||| | |||| ||||||||||    
T  35679997 ataatgaatttggaaatccaaatacaacaatttgaaaatccaaaa 35680041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 7451827 - 7451690
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||| ||||||||||||| | ||||| |||||||||||||||  |||||||||||||   |||||||||||||||||||||||||||||||||||    
T  7451827 gatagtctgccttgcacaattttggacagtgccacgaaacgtcttaaagagagcgacctggt---cgtgactcaacctagtaacaacttcggtagataat 7451731  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |    ||||||| |||| ||||||||| |||||| ||||||||||    
T  7451730 a----gaatttgaaaattcaaatacaacagtttgaaaatccaaaa 7451690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 36423706 - 36423569
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||| ||||||||||||| ||||||| | |||||||||||||  |||||||||||||   || ||||||||||||||||||||||||||||||||    
T  36423706 gatagtctgccttgcacaattttgggcagtgccgcgaaacgtcttaaagagagcgacctggt---cgcgactcaacctagtaacaacttcggtagataat 36423610  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |    || ||||||||||||||||||| |||||| ||||||||||    
T  36423609 a----gattttggaaatccaaatacaacagtttgaaaatccaaaa 36423569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 36428778 - 36428641
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||| ||||||||||||| ||||||  | | |||||||||||  |||||||||||||   |||||||||||||||||||||||||| ||||||||    
T  36428778 gatagtctgccttgcacaattttgggcagttccgcaaaacgtcttaaagagagcgacctggt---cgtgactcaacctagtaacaacttcgttagataat 36428682  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |    |||||||||||||||||||||| |||||||||||||||||    
T  36428681 a----gaatttggaaatccaaatacaacagtttggaaatccaaaa 36428641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 37652856 - 37652993
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||| ||||||||||||| | || ||||||||||||||||||  ||||||||||| |   |||||||||||||| ||||||||||||||||||||    
T  37652856 gatagtctgccttgcacaattttggacaatgtcacgaaacgtcttaaagagagcgacctgat---cgtgactcaacctaataacaacttcggtagataat 37652952  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |    |||||||||||||||||||||| | |||||||||||||||    
T  37652953 a----gaatttggaaatccaaatacaacaatttggaaatccaaaa 37652993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 12501925 - 12502063
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    |||||||||| |||||||||||| ||||||| |||||||||||||||  |||||||||   ||||| ||||||||||||||||||||||| |||||||||    
T  12501925 gatagtctgttttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacc---tggtcatgactcaacctagtaacaacttcagtagataat 12502021  T
Q  118 agaatgaatttggaaatccaaatac-aaaagtttggaaatccaaaa 162  Q
    |    |||||||||||||||||||| || |||||| ||||||||||    
T  12502022 a----gaatttggaaatccaaatacgaacagtttgaaaatccaaaa 12502063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 6155445 - 6155582
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    |||||||||||||| | |||||| | ||||| |||||||||||||||  ||||||||||| |   ||||||||||||||||||||| |||||||||||||    
T  6155445 gatagtctgtcttgtaaaattttggacagtgccacgaaacgtcttaaagagagcgacctgat---cgtgactcaacctagtaacaatttcggtagataat 6155541  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |    |||||||||||||||||||||| |||||||||| ||||||    
T  6155542 a----gaatttggaaatccaaatacaacagtttggaaaaccaaaa 6155582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 41587186 - 41587323
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    |||||||||||||||||||||||   |||||||||||||||||||||  ||||| |||||||   |||||||||| ||||||||||||||||||||||||    
T  41587186 gatagtctgtcttgcacaattttgaacagtgtcacgaaacgtcttaaagagagcaacctggt---cgtgactcaaactagtaacaacttcggtagataat 41587282  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |    ||||||| |||| ||||||||| ||||| |||||||||||    
T  41587283 a----gaatttgaaaattcaaatacaacagtttagaaatccaaaa 41587323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 18 - 161
Target Start/End: Complemental strand, 40147964 - 40147828
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||||||||||||||||| ||||||| |||||||| ||||||  |||||||||   || || |||||||||||| ||||||||||| ||||||||    
T  40147964 gatagtctgtcttgcacaattttgggcagtgccacgaaacatcttaaagagagcgacc---tgatcatgactcaacctaataacaacttcgatagataat 40147868  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaa 161  Q
    |    |||||||||||||||||||||| ||||||||||| ||||    
T  40147867 a----gaatttggaaatccaaatacaatagtttggaaattcaaa 40147828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 18 - 144
Target Start/End: Original strand, 36942291 - 36942410
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||| ||||||||||||| ||||||| || ||||||||||||  |||||||||||||   |||||||||||||||||||||||||||||||||||    
T  36942291 gatagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaagagagcgacctggt---cgtgactcaacctagtaacaacttcggtagataat 36942387  T
Q  118 agaatgaatttggaaatccaaatacaa 144  Q
    |    ||||||||||||||||| ||||    
T  36942388 a----gaatttggaaatccaaaaacaa 36942410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 18 - 164
Target Start/End: Original strand, 6514627 - 6514766
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||| |||||| |||||| ||||||| |||||||||||||||  |||| |||    |||||||||||||||||||||||||||| ||||||||||    
T  6514627 gatagtctgccttgcaaaattttgggcagtgccacgaaacgtcttaaagagagtgac---ttggtcgtgactcaacctagtaacaactttggtagataat 6514723  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaaca 164  Q
    |    |||||||||||||||||||||| |||||  ||||| ||||||    
T  6514724 a----gaatttggaaatccaaatacaacagttttaaaatcaaaaaca 6514766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 18 - 144
Target Start/End: Original strand, 36937537 - 36937656
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||| ||||||||||||| ||||||| || ||||||||||||  |||||||||||||   |||||||||||||| ||||||||||||||||||||    
T  36937537 gatagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaagagagcgacctggt---cgtgactcaacctaataacaacttcggtagataat 36937633  T
Q  118 agaatgaatttggaaatccaaatacaa 144  Q
    |    ||||||||||||||||| ||||    
T  36937634 a----gaatttggaaatccaaaaacaa 36937656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 3666001 - 3665863
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||| ||||||||||||| ||||||| ||||||||||||| |  |||||||||| ||   ||||||||||||||||||||||||||||||| |||    
T  3666001 gatagtctgccttgcacaattttgggcagtgccacgaaacgtcttgaagagagcgacctagt---cgtgactcaacctagtaacaacttcggtagaaaat 3665905  T
Q  118 agaatgaatttggaaatcc-aaatacaaaagtttggaaatccaaaa 162  Q
    |    ||||||| ||| || |||||||| |||||||||||||||||    
T  3665904 a----gaatttgaaaaaccaaaatacaacagtttggaaatccaaaa 3665863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 23 - 162
Target Start/End: Original strand, 11981309 - 11981442
Alignment:
Q  23 tctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataatagaat 122  Q
    |||||||||||||||||| ||||||| ||| |||||||||||  | |||||||||||  |    | ||||||||||||||||||||||||||||||        
T  11981309 tctgtcttgcacaattttgggcagtgccacaaaacgtcttaaagaaagcgacctggtcataa--aatcaacctagtaacaacttcggtagataata---- 11981402  T
Q  123 gaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |||||||||||||||| ||||| |||||| ||||||||||    
T  11981403 gaatttggaaatccaactacaacagtttgaaaatccaaaa 11981442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 19 - 144
Target Start/End: Original strand, 20181090 - 20181208
Alignment:
Q  19 atagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataata 118  Q
    ||||||||||||||| |||||| | || || |||||||||||||||  |||| ||||||||   |||||||||||||| |||||| ||| ||||||||||    
T  20181090 atagtctgtcttgcataattttggacaatgccacgaaacgtcttaaagagagtgacctggt---cgtgactcaacctaataacaatttcagtagataata 20181186  T
Q  119 gaatgaatttggaaatccaaatacaa 144  Q
        ||||||||||||||||||||||    
T  20181187 ----gaatttggaaatccaaatacaa 20181208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 18 - 108
Target Start/End: Original strand, 16116275 - 16116362
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcg 108  Q
    |||||| |||||||||||||||| |||||||||||||||||| ||||| ||||| |||   | ||||||||| ||||||| ||||||||||    
T  16116275 gatagtttgtcttgcacaattttgggcagtgtcacgaaacgttttaaggagagcaacc---tagtcgtgacttaacctagcaacaacttcg 16116362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 32461575 - 32461700
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||||||||||||||||| ||||||| ||| |||||||||||  |||||||||   |||||||||||||||         |||||||||||||||    
T  32461575 gatagtctgtcttgcacaattttgggcagtgccacaaaacgtcttaaagagagcgacc---tggtcgtgactcaac---------acttcggtagataat 32461662  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |    |||||| |||||||||||||||   |||||||||||||||    
T  32461663 a----gaatttagaaatccaaatacaa---tttggaaatccaaaa 32461700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 114
Target Start/End: Original strand, 12102857 - 12102950
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagat 114  Q
    ||||||||  ||||||||||||| | ||||| ||| ||| |||||||  |||||||||| ||   ||||||||||||||||||||||||||||||||    
T  12102857 gatagtcttccttgcacaattttggccagtgccacaaaaagtcttaaagagagcgacctagt---cgtgactcaacctagtaacaacttcggtagat 12102950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 82 - 162
Target Start/End: Original strand, 37550089 - 37550164
Alignment:
Q  82 tcgtgactcaacctagtaacaacttcggtagataatagaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    ||||||||||||||| || ||||||||||||||||||||||    |||||||||||||||||| | |||| ||||||||||    
T  37550089 tcgtgactcaacctaata-caacttcggtagataatagaat----ttggaaatccaaatacaacaatttgaaaatccaaaa 37550164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 166 - 237
Target Start/End: Complemental strand, 7821866 - 7821793
Alignment:
Q  166 gttgagaatgttatgtaattctcgaagaattaatttatt--tttaaaggatccctgaatgatcgctcaaataaa 237  Q
    ||||||||||| ||||| || ||||||||||||||| ||  ||| ||||||||||||| |||||||||||||||    
T  7821866 gttgagaatgtaatgtagttatcgaagaattaatttgttgtttttaaggatccctgaaggatcgctcaaataaa 7821793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 116
Target Start/End: Original strand, 12041958 - 12042055
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactca--acctagtaacaacttcggtagata 115  Q
    |||||| || |||||| | |||| ||||||| |||||||||||||||  ||| |||||   |||||||||||||  |||||||||||||||| |||||||    
T  12041958 gatagtttgccttgcatatttttgggcagtgccacgaaacgtcttaaagagaacgacc---tggtcgtgactcatgacctagtaacaacttcagtagata 12042054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 29 - 76
Target Start/End: Original strand, 18265541 - 18265588
Alignment:
Q  29 ttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacct 76  Q
    |||||||||||||||||||||||| |||||||||||  ||||||||||    
T  18265541 ttgcacaattttaggcagtgtcacaaaacgtcttaaagagagcgacct 18265588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 87 - 115
Target Start/End: Complemental strand, 9911156 - 9911128
Alignment:
Q  87 actcaacctagtaacaacttcggtagata 115  Q
    |||||||||||||||||||||||||||||    
T  9911156 actcaacctagtaacaacttcggtagata 9911128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 103; Significance: 5e-51; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 25478323 - 25478464
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||  ||||||||||||| ||   ||||||||||||||||||||||||||||||||    
T  25478323 gatagtctgccttgcacaattttgggcagtgtcacgaaacgtcttaaagagagcgacctggttgt---gactcaacctagtaacaacttcggtagataat 25478419  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||    
T  25478420 agaatgaatttggaaatccaaatacaatagtttgaaaatccaaaa 25478464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 18 - 164
Target Start/End: Complemental strand, 28603367 - 28603228
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||||||||||||||||| | |||||||||||||||| ||||  |||||||||||||   |||||||||||||||||||||||||||||||||||    
T  28603367 gatagtctgtcttgcacaattttggacagtgtcacgaaacgttttaaagagagcgacctggt---cgtgactcaacctagtaacaacttcggtagataat 28603271  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaaca 164  Q
    |    |||||||||||||||||||||| |||||||||||||||||||    
T  28603270 a----gaatttggaaatccaaatacaacagtttggaaatccaaaaca 28603228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 25497351 - 25497492
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||| ||||||||| ||| |||||||| ||||||||||||||  |||||||||||||   ||||||||||||||||||||| |||||||||||||    
T  25497351 gatagtctgacttgcacaaatttgggcagtgttacgaaacgtcttaaagagagcgacctggt---cgtgactcaacctagtaacaatttcggtagataat 25497447  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    ||||||| |||||||||| |||||||| |||||||||||||||||    
T  25497448 agaatgagtttggaaatctaaatacaatagtttggaaatccaaaa 25497492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 1935019 - 1935156
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||||  |||||||||   |||||||||||||||||||||||||||||||||||||||    
T  1935019 gatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacc---tggtcgtgactcaacctagtaacaacttcggtagataat 1935115  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |    |||||||||||||||||||||| |||||| |||| |||||    
T  1935116 a----gaatttggaaatccaaatacaacagtttgaaaattcaaaa 1935156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 10160750 - 10160887
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||| ||||||||||||| ||||||| |||||||||||||||  |||||||||||||   |||||||||||||||||||||||||||||||||||    
T  10160750 gatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggt---cgtgactcaacctagtaacaacttcggtagataat 10160846  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |    |||||| ||||||||||||||| |||||||||||||||||    
T  10160847 a----gaatttagaaatccaaatacaagagtttggaaatccaaaa 10160887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 30650998 - 30650861
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||| ||||||||||||| ||||||| |||||||||||||||  ||||||| |||||   |||||||||||||||||||||||||||||||||||    
T  30650998 gatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgatctggt---cgtgactcaacctagtaacaacttcggtagataat 30650902  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |    |||||||||||||||||||||| |||||||||||||||||    
T  30650901 a----gaatttggaaatccaaatacaacagtttggaaatccaaaa 30650861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 9189829 - 9189966
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||| ||||||||||||| | ||||| |||||||||||||||  ||||| |||||||   |||||||||||||||||||||||||||||||||||    
T  9189829 gatagtctgccttgcacaattttggacagtgccacgaaacgtcttaaagagagcaacctggt---cgtgactcaacctagtaacaacttcggtagataat 9189925  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |    |||||||||||||||||||||| |||||||||||||||||    
T  9189926 a----gaatttggaaatccaaatacaacagtttggaaatccaaaa 9189966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 19892492 - 19892629
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    |||||||||| |||||||||||| | ||||| || ||||||||||||  |||||||||||||   |||||||||||||||||||||||||||||||||||    
T  19892492 gatagtctgtgttgcacaattttggacagtgccaggaaacgtcttaaagagagcgacctggt---cgtgactcaacctagtaacaacttcggtagataat 19892588  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |    |||||||||||||||||||||| |||||||||||||||||    
T  19892589 a----gaatttggaaatccaaatacaacagtttggaaatccaaaa 19892629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 35601991 - 35601854
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    |||| |||||||||||||||||| | ||||| ||||||||||||||| ||||||||||   ||||||||| |||||||||||||||||||||||||||||    
T  35601991 gatactctgtcttgcacaattttggacagtgccacgaaacgtcttaaaaagagcgacc---tggtcgtgattcaacctagtaacaacttcggtagataat 35601895  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |    ||||||| |||||||||||||| |||||||||||||||||    
T  35601894 a----gaatttgaaaatccaaatacaatagtttggaaatccaaaa 35601854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 9180750 - 9180887
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||| ||||||||||||| | ||||| |||||||||||||||  |||||||||||||   |||||||||||||||||||||||||||||||||||    
T  9180750 gatagtctgccttgcacaattttggacagtgccacgaaacgtcttaaagagagcgacctggt---cgtgactcaacctagtaacaacttcggtagataat 9180846  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |    ||||||| |||||||||||||| ||||||||||| |||||    
T  9180847 a----gaatttgaaaatccaaatacaacagtttggaaattcaaaa 9180887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 19 - 162
Target Start/End: Complemental strand, 18344499 - 18344363
Alignment:
Q  19 atagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataata 118  Q
    |||||||| ||||||||||||| ||||||| |||||||||||||||  |||||||||   |||||||||||||| ||||||||||||||||| |||||||    
T  18344499 atagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacc---tggtcgtgactcaatctagtaacaacttcggttgataata 18344403  T
Q  119 gaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
        ||||||| |||||||||||||| |||||||||||||||||    
T  18344402 ----gaatttgaaaatccaaatacaacagtttggaaatccaaaa 18344363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 24 - 162
Target Start/End: Original strand, 35639029 - 35639160
Alignment:
Q  24 ctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataatagaatg 123  Q
    ||||||||||||||||| ||||||| ||||||||||||||| ||||||||||   || |||||| ||||| ||||||||||||||||||||||||    |    
T  35639029 ctgtcttgcacaattttgggcagtgccacgaaacgtcttaaaaagagcgacc---tgatcgtgattcaacttagtaacaacttcggtagataata----g 35639121  T
Q  124 aatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |||||| |||||||||||||| |||||||||||||||||    
T  35639122 aatttgaaaatccaaatacaatagtttggaaatccaaaa 35639160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 31326808 - 31326671
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||| ||||||||||||| ||||||| || ||||||||||||  |||||||||||||   |||||||||||||||||||||||||||||||||||    
T  31326808 gatagtctgccttgcacaattttgggcagtggcatgaaacgtcttaaagagagcgacctggt---cgtgactcaacctagtaacaacttcggtagataat 31326712  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |    |||||||||||| ||| ||||| | |||||||||||||||    
T  31326711 a----gaatttggaaattcaattacaacattttggaaatccaaaa 31326671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 30658332 - 30658195
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||| |||||||||||||  | |||| |||||||||||||||  |||||||||||||   ||||||||||| |||||||||||||||||||||||    
T  30658332 gatagtctgccttgcacaattttgagtagtgccacgaaacgtcttaaagagagcgacctggt---cgtgactcaacatagtaacaacttcggtagataat 30658236  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    ||||     |||||||| ||||||||| |||||||||||||||||    
T  30658235 agaac----ttggaaatgcaaatacaacagtttggaaatccaaaa 30658195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 7737877 - 7738014
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||||||||||||||||| ||||||| ||| |||| ||||||  |||||||| ||||   |||||||||||||||||||||||||||| ||||||    
T  7737877 gatagtctgtcttgcacaattttgggcagtgccacaaaacttcttaaagagagcgacatggt---cgtgactcaacctagtaacaacttcggtggataat 7737973  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |    ||||||| |||||||||||||| ||| | |||||||||||    
T  7737974 a----gaatttgaaaatccaaatacaacagtatagaaatccaaaa 7738014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 29677836 - 29677700
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    |||||| || ||||||||||||| ||||||| ||| ||| |||||||  |||||||||||||   |||||||||||||||||||||||||| ||||||||    
T  29677836 gatagtttgccttgcacaatttttggcagtgccactaaatgtcttaatgagagcgacctggt---cgtgactcaacctagtaacaacttcgctagataat 29677740  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |    |||||||||||||||||||||| ||||| |||||||||||    
T  29677739 a----gaatttggaaatccaaatacaacagttt-gaaatccaaaa 29677700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 12796994 - 12796857
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    |||||||||||||| |||||||| ||||||| ||| |||||||||||  ||||||| |||||   |||||||||||||| |||||||||||| |||||||    
T  12796994 gatagtctgtcttgaacaattttgggcagtgccacaaaacgtcttaaagagagcgatctggt---cgtgactcaacctaataacaacttcggcagataat 12796898  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |    ||||||| |||| ||||||||| ||| |||||||||||||    
T  12796897 a----gaatttgaaaattcaaatacaacagtgtggaaatccaaaa 12796857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 30631648 - 30631511
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    |||||||| |||||||||||||| |||| || ||||||| || ||||  |||| |||||  |   |||||||||||||||||||||||||||||||||||    
T  30631648 gatagtctttcttgcacaatttttggcaatgccacgaaaagttttaaagagagtgacctaat---cgtgactcaacctagtaacaacttcggtagataat 30631552  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    ||||     |||||||||||||||||| |||||||||||||||||    
T  30631551 agaac----ttggaaatccaaatacaacagtttggaaatccaaaa 30631511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 29677450 - 29677314
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    |||||||||  |||||||||||| ||||||| |||||||||||||||  |||||||| || |   |||||||||||||||||||||||||| ||||||||    
T  29677450 gatagtctgctttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacatgat---cgtgactcaacctagtaacaacttcgctagataat 29677354  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |    ||||||| |||| ||||||||| ||||| |||||||||||    
T  29677353 a----gaatttgaaaattcaaatacaacagttt-gaaatccaaaa 29677314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 42926785 - 42926923
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgt--cttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagata 115  Q
    ||||||||  ||||||||||||| ||||||| ||||||||||  |||||  |||||| |||| |   |||||||||||||||||||||||||||||||||    
T  42926785 gatagtctaccttgcacaattttgggcagtgccacgaaacgtgtcttaaagagagcggcctgat---cgtgactcaacctagtaacaacttcggtagata 42926881  T
Q  116 atagaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |||    ||||||||||||||||||| || |||||| ||||||||||    
T  42926882 ata----gaatttggaaatccaaata-aacagtttgaaaatccaaaa 42926923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 18 - 163
Target Start/End: Original strand, 19578440 - 19578590
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||  |||||||||||||||| |||| ||| |||||||||||  ||||||| |||||   |||||||||||||| |||||||||||||||||| |    
T  19578440 gatagtcttccttgcacaattttaggtagtgccacaaaacgtcttaaagagagcgatctggt---cgtgactcaacctaataacaacttcggtagatatt 19578536  T
Q  118 -------agaat-gaatttggaaatccaaatacaaaagtttggaaatccaaaac 163  Q
           | | | ||||||| |||||||||||||| ||||||||||||||||||    
T  19578537 ctctttcaaagtagaatttgaaaatccaaatacaatagtttggaaatccaaaac 19578590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 79 - 122
Target Start/End: Original strand, 15489798 - 15489841
Alignment:
Q  79 tggtcgtgactcaacctagtaacaacttcggtagataatagaat 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  15489798 tggtcgtgactcaacctagtaacaacttcggtagataatagaat 15489841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 18 - 115
Target Start/End: Complemental strand, 20711514 - 20711420
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagata 115  Q
    |||||||||||||||||||||||  ||||||  ||||||| |||||| | ||| ||  ||||   |||||||||||||||||||||||||||||||||    
T  20711514 gatagtctgtcttgcacaattttgagcagtgctacgaaacatcttaaaaggagtgatatggt---cgtgactcaacctagtaacaacttcggtagata 20711420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 28 - 114
Target Start/End: Original strand, 19094531 - 19094614
Alignment:
Q  28 cttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagat 114  Q
    ||||||||||||| ||||||  ||  |||||| ||||| ||||||||||| |   |||||||||||||| |||||||||||||||||    
T  19094531 cttgcacaattttgggcagtaccaaaaaacgttttaaggagagcgacctgat---cgtgactcaacctaataacaacttcggtagat 19094614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 45 - 115
Target Start/End: Original strand, 17545351 - 17545419
Alignment:
Q  45 agtgtcacgaaacgtcttaagaagag-cgacctggtggtcgtgactcaacctagtaacaacttcggtagata 115  Q
    ||||||||||||||||||||||| |  ||||||| |   ||| |||||||||||||||||||||||||||||    
T  17545351 agtgtcacgaaacgtcttaagaaaaaacgacctgat---cgtaactcaacctagtaacaacttcggtagata 17545419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 115
Target Start/End: Original strand, 21523746 - 21523839
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagata 115  Q
    ||||||||  ||||||||||||| ||||||| |||||||||| ||||  | ||| |||   |||||||||||||||||| |||||||| | |||||||    
T  21523746 gatagtctcccttgcacaattttgggcagtgccacgaaacgt-ttaaagatagcaacc---tggtcgtgactcaacctattaacaactccagtagata 21523839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 166 - 240
Target Start/End: Complemental strand, 17828942 - 17828866
Alignment:
Q  166 gttgagaatgttatgtaattctcgaagaattaatttatt--tttaaaggatccctgaatgatcgctcaaataaagaa 240  Q
    ||||||||||| ||||| || |||| |||||||||| ||  ||| ||||||||| |||  |||||||||||||||||    
T  17828942 gttgagaatgtaatgtagttatcgaggaattaatttgttgtttttaaggatccccgaagaatcgctcaaataaagaa 17828866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 79 - 112
Target Start/End: Original strand, 40847679 - 40847712
Alignment:
Q  79 tggtcgtgactcaacctagtaacaacttcggtag 112  Q
    |||||||||||||| |||||||||||||||||||    
T  40847679 tggtcgtgactcaatctagtaacaacttcggtag 40847712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 94; Significance: 1e-45; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 7571244 - 7571381
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||||  |||||||||   |||||||||||||||||||||||||||||||||||||||    
T  7571244 gatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacc---tggtcgtgactcaacctagtaacaacttcggtagataat 7571340  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |    |||||||||||||||||||||| |||||||||||||||||    
T  7571341 a----gaatttggaaatccaaatacaacagtttggaaatccaaaa 7571381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 3672653 - 3672516
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||| ||||||||||||| ||||||| || ||||||||||||  |||||||||||||   |||||||||||||||||||||||||||||||||||    
T  3672653 gatagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaagagagcgacctggt---cgtgactcaacctagtaacaacttcggtagataat 3672557  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |    |||||||||||||||||||||| |||||||||||||||||    
T  3672556 a----gaatttggaaatccaaatacaacagtttggaaatccaaaa 3672516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 3692685 - 3692548
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||| ||||||||||||| ||||||| || ||||||||||||  |||||||||||||   |||||||||||||||||||||||||||||||||||    
T  3692685 gatagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaagagagcgacctggt---cgtgactcaacctagtaacaacttcggtagataat 3692589  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |    |||||||||||||||||||||| |||||||||||||||||    
T  3692588 a----gaatttggaaatccaaatacaacagtttggaaatccaaaa 3692548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 8883237 - 8883100
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||||  |||||||||   |||||||||||| ||||||||||||||||||||||||||    
T  8883237 gatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacc---tggtcgtgactcgacctagtaacaacttcggtagataat 8883141  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |    ||||||| |||||||||||||| |||||||||||||||||    
T  8883140 a----gaatttgaaaatccaaatacaacagtttggaaatccaaaa 8883100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 23666149 - 23666286
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||| ||||||||||||| ||||||| |||||||||||||||  |||||||||||||   |||||||||||||||||||||||||||||||||||    
T  23666149 gatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggt---cgtgactcaacctagtaacaacttcggtagataat 23666245  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |    |||||||||||||||||||||| ||||||||||| |||||    
T  23666246 a----gaatttggaaatccaaatacaacagtttggaaattcaaaa 23666286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 24038397 - 24038534
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||| ||||||||||||| ||||||| |||||||||||||||  |||||||||||||   |||||||||||||||||||||||||||||||||||    
T  24038397 gatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggt---cgtgactcaacctagtaacaacttcggtagataat 24038493  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |    |||||||||||||||||||||| ||||||||||| |||||    
T  24038494 a----gaatttggaaatccaaatacaacagtttggaaattcaaaa 24038534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 39775754 - 39775891
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||| ||||||||||||| ||||||| |||||||||||||||  |||||||||   ||||||||||||||||||||| |||||||||||||||||    
T  39775754 gatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacc---tggtcgtgactcaacctagtagcaacttcggtagataat 39775850  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |    |||||||||||||||||||||| |||||||||||||||||    
T  39775851 a----gaatttggaaatccaaatacaacagtttggaaatccaaaa 39775891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 758394 - 758531
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||| ||||||||||||| || |||| |||||||||||||||  ||||||| |||||   |||||||||||||||||||||||||||||||||||    
T  758394 gatagtctgccttgcacaattttgggtagtgccacgaaacgtcttaaagagagcgatctggt---cgtgactcaacctagtaacaacttcggtagataat 758490  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |    |||||||||||||||||||||| |||||||||||||||||    
T  758491 a----gaatttggaaatccaaatacaacagtttggaaatccaaaa 758531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 3033711 - 3033574
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||| ||||||||||||| ||||||| || ||||||||||||  |||||||||||||   |||||||||||||||||||||||||||||||||||    
T  3033711 gatagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaagagagcgacctggt---cgtgactcaacctagtaacaacttcggtagataat 3033615  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |    |||||||||||||||||||| | |||||||||||||||||    
T  3033614 a----gaatttggaaatccaaatactacagtttggaaatccaaaa 3033574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 18 - 156
Target Start/End: Complemental strand, 3419062 - 3418931
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||| ||||||||||||| ||||||| |||||||||||||||  |||||||| ||||   |||||||||||||||||||||||||||||||||||    
T  3419062 gatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacttggt---cgtgactcaacctagtaacaacttcggtagataat 3418966  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaat 156  Q
    |    |||||||||||||||||||||| |||||||||||    
T  3418965 a----gaatttggaaatccaaatacaacagtttggaaat 3418931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 17 - 162
Target Start/End: Complemental strand, 29350308 - 29350170
Alignment:
Q  17 agatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataa 116  Q
    |||| ||||| ||||||||||||| ||||||| |||||||||||||||  | ||||||    ||||||||||||||||||||||||||||||||||||||    
T  29350308 agatggtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagaaagcgac---atggtcgtgactcaacctagtaacaacttcggtagataa 29350212  T
Q  117 tagaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    ||    |||||||||||||||||||||| |||||||||||||||||    
T  29350211 ta----gaatttggaaatccaaatacaacagtttggaaatccaaaa 29350170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 19 - 162
Target Start/End: Complemental strand, 18467291 - 18467155
Alignment:
Q  19 atagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataata 118  Q
    |||||||| ||||||||||||| ||||||| |||||||||||||||  |||||||||||||   ||||||||||||||||||||||||||||||||||||    
T  18467291 atagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggt---cgtgactcaacctagtaacaacttcggtagataata 18467195  T
Q  119 gaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
        ||||||| |||||||||||||  ||||||||||| |||||    
T  18467194 ----gaatttgaaaatccaaatacatcagtttggaaattcaaaa 18467155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 8887997 - 8887860
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    |||| |||||||||||||||||| | |||||  || |||||||||||  |||||||||||||   |||||||||||||||||||||||||||||||||||    
T  8887997 gataatctgtcttgcacaattttggacagtgcaacaaaacgtcttaaagagagcgacctggt---cgtgactcaacctagtaacaacttcggtagataat 8887901  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |    |||||||||||| ||||||||| |||||||||||||||||    
T  8887900 a----gaatttggaaattcaaatacaacagtttggaaatccaaaa 8887860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 29715711 - 29715574
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||  || |||||||||| | ||||||||||||||||||||| |||||||| |||||   |||||||||||||| ||||||||||||||||||||    
T  29715711 gatagtcttcctagcacaattttggacagtgtcacgaaacgtcttaaaaagagcgatctggt---cgtgactcaacctaataacaacttcggtagataat 29715615  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |    ||||||||||||| |||||||| |||||||||||||||||    
T  29715614 a----gaatttggaaatctaaatacaacagtttggaaatccaaaa 29715574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 8069746 - 8069609
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||||||||||||||||  | ||||| |||||||||||||||  |||||||||||||   ||||||||||||||||||||||||||||||||||     
T  8069746 gatagtctgtcttgcacaatttg-gacagtgccacgaaacgtcttaaagagagcgacctggt---cgtgactcaacctagtaacaacttcggtagataa- 8069652  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
      |  ||||||||||||||||||||||  ||||||||||||||||    
T  8069651 --atagaatttggaaatccaaatacaactgtttggaaatccaaaa 8069609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 22 - 162
Target Start/End: Original strand, 14438725 - 14438858
Alignment:
Q  22 gtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataatagaa 121  Q
    ||||| ||||||||||||| || |||| |||||||||||||||  || ||||||||||   |||||||||||||||||||||||||||||||||||||||    
T  14438725 gtctgccttgcacaattttgggtagtgccacgaaacgtcttaaagagggcgacctggt---cgtgactcaacctagtaacaacttcggtagataatagaa 14438821  T
Q  122 tgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
         |||||||||||||||||| ||||||| |||||||||    
T  14438822 c----ttggaaatccaaatacaacagtttgggaatccaaaa 14438858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 49971450 - 49971587
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||| ||||||||||||| |  |||| |||||||||||||||  ||| |||||||||   |||||||||||||||||||||||||||||||||||    
T  49971450 gatagtctgccttgcacaattttggatagtgccacgaaacgtcttaaagagatcgacctggt---cgtgactcaacctagtaacaacttcggtagataat 49971546  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |     || |||||||||||||||||| |||||||||||||||||    
T  49971547 a----aaacttggaaatccaaatacaacagtttggaaatccaaaa 49971587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 35 - 164
Target Start/End: Complemental strand, 27708928 - 27708806
Alignment:
Q  35 aattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataatagaatgaatttggaaat 134  Q
    |||||| ||||||| |||||||||||||||  ||| |||||||||   ||||||||||||||||||||||||||||| ||||||    ||||||||||||    
T  27708928 aattttgggcagtgccacgaaacgtcttaaagagaacgacctggt---cgtgactcaacctagtaacaacttcggtatataata----gaatttggaaat 27708836  T
Q  135 ccaaatacaaaagtttggaaatccaaaaca 164  Q
    |||||||||| |||||||||||| ||||||    
T  27708835 ccaaatacaacagtttggaaatcaaaaaca 27708806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 18472074 - 18471938
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||| ||||||||||||||||||||| |||||| | || |||  |||||||||||||   |||||||||||||||||||||||||||||||||||    
T  18472074 gatagtctgccttgcacaattttaggcagtgccacgaa-catcgtaaagagagcgacctggt---cgtgactcaacctagtaacaacttcggtagataat 18471979  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |    |||||||||||||||||||||  ||||| ||||| |||||    
T  18471978 a----gaatttggaaatccaaatacatcagtttagaaattcaaaa 18471938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 55431382 - 55431245
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||| |||||| |||||| | |||||||||||||||||||||  |||||||||   || ||||||||||||||| |||||||||| | |||||||    
T  55431382 gatagtctgccttgcataatttttgacagtgtcacgaaacgtcttaaagagagcgacc---tgatcgtgactcaacctaataacaacttcagcagataat 55431286  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |    ||||||||||||||||||||||  ||||||||||||||||    
T  55431285 a----gaatttggaaatccaaatacaactgtttggaaatccaaaa 55431245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 18 - 156
Target Start/End: Complemental strand, 20520121 - 20519990
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||  |||||||||| || ||||||| |||||||||||||||  |||| ||||||||   |||||||||||||||||||||||||| ||||||||    
T  20520121 gatagtctcccttgcacaatcttgggcagtgccacgaaacgtcttaaagagagtgacctggt---cgtgactcaacctagtaacaacttcgctagataat 20520025  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaat 156  Q
    |    |||||||||||||||||||||| |||||| ||||    
T  20520024 a----gaatttggaaatccaaatacaacagtttgaaaat 20519990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 18 - 144
Target Start/End: Original strand, 32474706 - 32474823
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||   |||||||||   |||||||| ||||| ||||||||||||||||||||||||    
T  32474706 gatagtctgtcttgcacaattttgggcagtgccacgaaacgtctta--gagagcgacc---tggtcgtggctcaatctagtaacaacttcggtagataat 32474800  T
Q  118 agaatgaatttggaaatccaaatacaa 144  Q
    |    ||||||||||||||||| ||||    
T  32474801 a----gaatttggaaatccaaaaacaa 32474823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 79 - 162
Target Start/End: Original strand, 23661534 - 23661613
Alignment:
Q  79 tggtcgtgactcaacctagtaacaacttcggtagataatagaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    ||||||||||||||||||||||||||||||||||||||||    |||||||||||||||||||||| ||||||||||| |||||    
T  23661534 tggtcgtgactcaacctagtaacaacttcggtagataata----gaatttggaaatccaaatacaacagtttggaaattcaaaa 23661613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 12965899 - 12966036
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||||||||||||||||| ||||||| ||  |||||||||||  |||||||||   |||| ||||||||| ||||||||||||||||||||| ||    
T  12965899 gatagtctgtcttgcacaattttgggcagtgccataaaacgtcttaaagagagcgacc---tggttgtgactcaatctagtaacaacttcggtagatcat 12965995  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |    ||||||||||| ||||||||||  ||||| |||| |||||    
T  12965996 a----gaatttggaaacccaaatacaacggtttgaaaattcaaaa 12966036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 18 - 161
Target Start/End: Original strand, 3657266 - 3657402
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    |||||||||||||||||||||||   ||||| |||||||||||||||  ||||||| ||  |   ||||||||||| |||||||||||||||||||||||    
T  3657266 gatagtctgtcttgcacaattttgaacagtgccacgaaacgtcttaaagagagcgatctaat---cgtgactcaacatagtaacaacttcggtagataat 3657362  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaa 161  Q
    |    |||||| ||||| ||||||||| |||||| |||||||||    
T  3657363 a----gaatttagaaattcaaatacaacagtttgaaaatccaaa 3657402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 18 - 115
Target Start/End: Original strand, 12112667 - 12112761
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagata 115  Q
    ||||||||||||||||||| ||| | ||||| |||||||||||||||  |||||||||   | ||||||| |||||||||||||||||||||||||||    
T  12112667 gatagtctgtcttgcacaactttggacagtgccacgaaacgtcttaaagagagcgacc---tagtcgtgattcaacctagtaacaacttcggtagata 12112761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 19 - 115
Target Start/End: Complemental strand, 28125182 - 28125090
Alignment:
Q  19 atagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagata 115  Q
    ||||||||||||||||||||||| |||||| ||||||| ||||||| |||||| |||   ||||||||||||||||||||||||| |||| ||||||    
T  28125182 atagtctgtcttgcacaattttaagcagtgccacgaaatgtcttaa-aagagcaacc---tggtcgtgactcaacctagtaacaatttcgatagata 28125090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 18 - 114
Target Start/End: Original strand, 12971659 - 12971752
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagat 114  Q
    |||| |||||||||||||||||| |||| || |||||||||||||||  |||| ||||   ||||||||| |||||||||||||||||||| |||||    
T  12971659 gataatctgtcttgcacaattttgggcaatgccacgaaacgtcttaaagagagagacc---tggtcgtgagtcaacctagtaacaacttcgatagat 12971752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 45 - 122
Target Start/End: Original strand, 2207760 - 2207834
Alignment:
Q  45 agtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataatagaat 122  Q
    |||| ||| ||||||||||| ||||||||||||||   |||||||||| ||||| ||||||||| || ||||||||||    
T  2207760 agtgccactaaacgtcttaaaaagagcgacctggt---cgtgactcaatctagtgacaacttcgataaataatagaat 2207834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 183 - 240
Target Start/End: Complemental strand, 255102 - 255045
Alignment:
Q  183 attctcgaagaattaatttatttttaaaggatccctgaatgatcgctcaaataaagaa 240  Q
    ||||| ||||||||  ||| ||||| ||||||||||||| ||||||||||||||||||    
T  255102 attctagaagaatttcttttttttttaaggatccctgaaggatcgctcaaataaagaa 255045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 126 - 163
Target Start/End: Complemental strand, 16013686 - 16013649
Alignment:
Q  126 tttggaaatccaaatacaaaagtttggaaatccaaaac 163  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  16013686 tttggaaatccaaatacaacagtttggaaatccaaaac 16013649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 166 - 240
Target Start/End: Original strand, 13640176 - 13640254
Alignment:
Q  166 gttgagaatgttatgtaattctcgaagaattaattt---attttta-aaggatccctgaatgatcgctcaaataaagaa 240  Q
    |||||| |||| ||||| || |||||||||||||||   ||||||| |||||||| |||||||||||||| ||||||||    
T  13640176 gttgaggatgtaatgtagttatcgaagaattaatttgttatttttataaggatccttgaatgatcgctcagataaagaa 13640254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 240
Target Start/End: Original strand, 13922696 - 13922767
Alignment:
Q  170 agaatgttatgtaattctcgaagaattaatttatt-tttaaaggatccctgaatgatcgctcaaataaagaa 240  Q
    ||||||| ||||| |||| |||  |||||||| || ||| ||||||||||||| ||||||||||||||||||    
T  13922696 agaatgtaatgtagttcttgaaatattaatttgttattttaaggatccctgaaggatcgctcaaataaagaa 13922767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 76
Target Start/End: Complemental strand, 16983055 - 16983006
Alignment:
Q  27 tcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacct 76  Q
    |||| ||||||||| | |||||||| |||||||||||| |||||||||||    
T  16983055 tctttcacaattttggacagtgtcatgaaacgtcttaaaaagagcgacct 16983006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 90; Significance: 3e-43; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 7173 - 7036
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||| ||||||||||||| ||||||| |||||||||||||||  |||||||||||||   |||||||||||||||||||||||||||||||||||    
T  7173 gatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggt---cgtgactcaacctagtaacaacttcggtagataat 7077  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |    |||||||||||||||||||||| |||||||||||||||||    
T  7076 a----gaatttggaaatccaaatacaacagtttggaaatccaaaa 7036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 86; Significance: 6e-41; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 9913 - 10050
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||| ||||||||||||| ||||||| |||||||||||||||  |||||||||||||   |||||||||||||||||||||||||||||||||||    
T  9913 gatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggt---cgtgactcaacctagtaacaacttcggtagataat 10009  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |    ||||||||||||||||||||||  ||||||||||||||||    
T  10010 a----gaatttggaaatccaaatacaactgtttggaaatccaaaa 10050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 86; Significance: 6e-41; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 4143 - 4006
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||| ||||||||||||| ||||||| ||||||| |||||||  |||||||||||||   |||||||||||||||||||||||||||||||||||    
T  4143 gatagtctgccttgcacaattttgggcagtgccacgaaatgtcttaaagagagcgacctggt---cgtgactcaacctagtaacaacttcggtagataat 4047  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |    |||||||||||||||||||||| |||||||||||||||||    
T  4046 a----gaatttggaaatccaaatacaacagtttggaaatccaaaa 4006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 81 - 162
Target Start/End: Original strand, 444018 - 444095
Alignment:
Q  81 gtcgtgactcaacctagtaacaacttcggtagataatagaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    ||||||| ||||||||||||||||||||||| ||||||    ||||||| |||| ||||||||| |||||  ||||||||||    
T  444018 gtcgtgattcaacctagtaacaacttcggtaaataata----gaatttgaaaatacaaatacaagagtttaaaaatccaaaa 444095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 86; Significance: 6e-41; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 18876393 - 18876529
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||   ||||||||||||||||||||||||||||| |||||    
T  18876393 gatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaa-aagagcgacctggt---cgtgactcaacctagtaacaacttcggtatataat 18876488  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |    |||||||||||||||||||||  |||||||||||||||||    
T  18876489 a----gaatttggaaatccaaatacagcagtttggaaatccaaaa 18876529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 31449892 - 31450029
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||||  |||||||||   |||||||||||||||||||||||||||||| ||||||||    
T  31449892 gatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacc---tggtcgtgactcaacctagtaacaacttcgatagataat 31449988  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |    |||||||||||||||||||||| | |||||||||||||||    
T  31449989 a----gaatttggaaatccaaatacaacactttggaaatccaaaa 31450029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 33416616 - 33416479
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||||  ||| |||||||||   |||||||||||||||||||||||||||||||||||    
T  33416616 gatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagaccgacctggt---cgtgactcaacctagtaacaacttcggtagataat 33416520  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |    |||||||||||| ||||||||| |||||||||||||||||    
T  33416519 a----gaatttggaaattcaaatacaacagtttggaaatccaaaa 33416479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 28 - 162
Target Start/End: Original strand, 40130722 - 40130849
Alignment:
Q  28 cttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataatagaatgaatt 127  Q
    ||||||||||||| ||||||| |||||||||||||||  |||||||||||||   ||||||||||||||||||||||||||||||||||||    |||||    
T  40130722 cttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggt---cgtgactcaacctagtaacaacttcggtagataata----gaatt 40130814  T
Q  128 tggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    ||||||||||||||||| |||||||||||||||||    
T  40130815 tggaaatccaaatacaacagtttggaaatccaaaa 40130849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 4238341 - 4238478
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||| ||||||||||||| ||||||| || ||||||| ||||  |||||||||||||   |||||||||||||||||||||||||||||||||||    
T  4238341 gatagtctgccttgcacaattttgggcagtgccatgaaacgtgttaaagagagcgacctggt---cgtgactcaacctagtaacaacttcggtagataat 4238437  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |    |||||||||||||||||||||| |||||||||||||||||    
T  4238438 a----gaatttggaaatccaaatacaacagtttggaaatccaaaa 4238478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 4243080 - 4243217
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||| ||||||||||||| ||||||| || ||||||| ||||  |||||||||||||   |||||||||||||||||||||||||| ||||||||    
T  4243080 gatagtctgccttgcacaattttgggcagtgccatgaaacgtgttaaagagagcgacctggt---cgtgactcaacctagtaacaacttcgatagataat 4243176  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |    |||||||||||||||||||||| |||||||||||||||||    
T  4243177 a----gaatttggaaatccaaatacaacagtttggaaatccaaaa 4243217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 17026004 - 17025867
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    |||||||||||||||||||| || ||||||| |||||||||||||||  |||||||||||||   |||||||||||||||||||||||||||||||||||    
T  17026004 gatagtctgtcttgcacaatgttgggcagtgccacgaaacgtcttaaagagagcgacctggt---cgtgactcaacctagtaacaacttcggtagataat 17025908  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |    |||||||||||||||||||||| | |||| ||||| ||||    
T  17025907 a----gaatttggaaatccaaatacaacaatttgaaaatctaaaa 17025867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 17556496 - 17556359
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    |||||||||||||||||||| || ||||||| |||||||||||||||  |||||||||||||   |||||||||||||||||||||||||||||||||||    
T  17556496 gatagtctgtcttgcacaatgttgggcagtgccacgaaacgtcttaaagagagcgacctggt---cgtgactcaacctagtaacaacttcggtagataat 17556400  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |    |||||||||||||||||||||| | |||| ||||| ||||    
T  17556399 a----gaatttggaaatccaaatacaacaatttgaaaatctaaaa 17556359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 34118535 - 34118398
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||| ||||||||||||| ||||||| || ||||||||||||  |||||||||||||   ||||||||||||||||||||||||| |||||||||    
T  34118535 gatagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaagagagcgacctggt---cgtgactcaacctagtaacaacttcagtagataat 34118439  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |    ||||||||||||| |||||||  |||||||||||||||||    
T  34118438 a----gaatttggaaatctaaatacattagtttggaaatccaaaa 34118398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 18 - 122
Target Start/End: Complemental strand, 1807541 - 1807440
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||  |||||||||   | |||||||||||||||||||||||||||||||||||||    
T  1807541 gatagtctgccttgcacaattttgggcagtgtcacgaaacgtcttaaagagagcgacc---tagtcgtgactcaacctagtaacaacttcggtagataat 1807445  T
Q  118 agaat 122  Q
    |||||    
T  1807444 agaat 1807440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 44925949 - 44926086
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||| ||||||||||||| ||||||| |||||||||| ||||  |||||||||||||   |||||||||||||||||||||||||||||||||      
T  44925949 gatagtctgccttgcacaattttgggcagtgccacgaaacgttttaaagagagcgacctggt---cgtgactcaacctagtaacaacttcggtagata-- 44926043  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
      || ||||||| |||||||||||||  |||||||||||| ||||    
T  44926044 --aaagaatttgaaaatccaaatacagcagtttggaaatcaaaaa 44926086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 28559680 - 28559817
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    |||||| || ||||||||||||| | ||||| ||||||||||||||   ||||||||    | |||||||||||||||||||||||||||||||||||||    
T  28559680 gatagtttgccttgcacaattttggacagtgccacgaaacgtcttatagagagcgac---attgtcgtgactcaacctagtaacaacttcggtagataat 28559776  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |     |||||  |||||||||||||| |||||||||||||||||    
T  28559777 a----taatttataaatccaaatacaacagtttggaaatccaaaa 28559817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 19166703 - 19166608
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataa 116  Q
    ||||||||| | ||||||||||| ||||||| |||||||||||||||  |||||||| ||||   ||||||||||||||||||||||||||||||||||    
T  19166703 gatagtctgccgtgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacatggt---cgtgactcaacctagtaacaacttcggtagataa 19166608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 18 - 115
Target Start/End: Complemental strand, 24090696 - 24090602
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagata 115  Q
    |||| |||| ||||||||| ||| ||||||| |||||||||||||||  |||||||||||||   |||||||||||||||||||||||||||||||||    
T  24090696 gatattctgccttgcacaactttgggcagtgccacgaaacgtcttaaagagagcgacctggt---cgtgactcaacctagtaacaacttcggtagata 24090602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 38182263 - 38182388
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    |||| |||| |||||||||| || || |||| |||||||||| ||||  |||||||||   ||||||||||||||||| |||||||||||||||||||||    
T  38182263 gataatctgccttgcacaatcttgggaagtgccacgaaacgttttaaagagagcgacc---tggtcgtgactcaacct-gtaacaacttcggtagataat 38182358  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttg 151  Q
    |    |||||||||||||||||||||| ||||||    
T  38182359 a----gaatttggaaatccaaatacaacagtttg 38182388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 1910995 - 1911132
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    |||||||||  ||||||||||||    |||| |||||||||||||||  ||||||||||| |   ||||||| |||||| ||||||||||| ||||||||    
T  1910995 gatagtctgctttgcacaattttgactagtgccacgaaacgtcttaaagagagcgacctgat---cgtgacttaacctaataacaacttcgatagataat 1911091  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |||||    ||| |||||||||||||| |||||||||||||||||    
T  1911092 agaat----ttgaaaatccaaatacaacagtttggaaatccaaaa 1911132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 18 - 109
Target Start/End: Original strand, 40125911 - 40125999
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcgg 109  Q
    ||||||||| ||||||||||||| ||||||| |||||||||||||||  ||||||| |   |||||||||||||||||||||||||||||||    
T  40125911 gatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgatc---tggtcgtgactcaacctagtaacaacttcgg 40125999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 82 - 162
Target Start/End: Complemental strand, 19915155 - 19915079
Alignment:
Q  82 tcgtgactcaacctagtaacaacttcggtagataatagaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |||||||||||||||||||||||||||||||||||||    |||||||||||| ||||||||| |||||| ||||||||||    
T  19915155 tcgtgactcaacctagtaacaacttcggtagataata----gaatttggaaatacaaatacaacagtttgtaaatccaaaa 19915079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 18 - 122
Target Start/End: Original strand, 2355485 - 2355586
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    |||||||||||||||||||||||    |||||||||||||||||||| ||||| ||  |||||||   ||||||| ||||||||||||| ||||||||||    
T  2355485 gatagtctgtcttgcacaattttgaaaagtgtcacgaaacgtcttaaaaagagtgatatggtggt---gactcaatctagtaacaactttggtagataat 2355581  T
Q  118 agaat 122  Q
    |||||    
T  2355582 agaat 2355586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 18 - 114
Target Start/End: Original strand, 17953899 - 17953992
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagat 114  Q
    |||| |||||||||||||||||| ||||||| |||||||||||||||  | ||||||    ||||||| ||||||||||||||||||||||||||||    
T  17953899 gatattctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagaaagcgac---atggtcgttactcaacctagtaacaacttcggtagat 17953992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 18 - 118
Target Start/End: Complemental strand, 36683648 - 36683551
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||| ||| ||||||||| ||||||| |||||||||||||||  |||||||||   | ||| ||||||||||||||||||||| |||||||||||    
T  36683648 gatagtctgccttacacaattttgggcagtgccacgaaacgtcttaaagagagcgacc---tagtcatgactcaacctagtaacaactccggtagataat 36683552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 18 - 115
Target Start/End: Original strand, 23548658 - 23548752
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagata 115  Q
    ||||||| | ||||||||||||||  ||||| ||||||||||||||   ||||||||| |||   |||||||||||||||||||||||||||||||||    
T  23548658 gatagtccgccttgcacaattttacacagtgccacgaaacgtcttatagagagcgaccaggt---cgtgactcaacctagtaacaacttcggtagata 23548752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 169 - 240
Target Start/End: Complemental strand, 29183361 - 29183289
Alignment:
Q  169 gagaatgttatgtaattctcgaagaattaatttatt-tttaaaggatccctgaatgatcgctcaaataaagaa 240  Q
    |||||||| ||||| |||||||||||||||||| || ||| ||||||||||||| ||||||||||||||||||    
T  29183361 gagaatgtaatgtagttctcgaagaattaatttgttattttaaggatccctgaaggatcgctcaaataaagaa 29183289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 18 - 103
Target Start/End: Complemental strand, 2965699 - 2965618
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaa 103  Q
    |||||| |||||||||||||||||||||||| |||||||||| ||||  |||||||||   |||||||||||| ||||||||||||    
T  2965699 gatagtgtgtcttgcacaattttaggcagtgccacgaaacgttttaaagagagcgacc---tggtcgtgactc-acctagtaacaa 2965618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 114
Target Start/End: Original strand, 15875694 - 15875787
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagat 114  Q
    ||||||||| ||||||||||||| ||||||| ||||||||||| |||  |||||||||   ||||||| ||||||  |||||||||||||| |||||    
T  15875694 gatagtctgccttgcacaattttgggcagtgccacgaaacgtcctaaagagagcgacc---tggtcgtaactcaatttagtaacaacttcgatagat 15875787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 108
Target Start/End: Original strand, 24673351 - 24673438
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcg 108  Q
    |||||||| ||||||| ||||||   |||||||||||||||| |||| |||||||| |   || |||| ||||||||||||||||||||||    
T  24673351 gatagtctatcttgcataattttgaacagtgtcacgaaacgttttaaaaagagcgatc---tgatcgtaactcaacctagtaacaacttcg 24673438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 169 - 240
Target Start/End: Original strand, 8506520 - 8506592
Alignment:
Q  169 gagaatgttatgtaattctcgaagaattaatttatt-tttaaaggatccctgaatgatcgctcaaataaagaa 240  Q
    |||||||| ||||| || ||||||||||||||| || ||| |||||||| ||||  |||||||||||||||||    
T  8506520 gagaatgtaatgtagttatcgaagaattaatttgttattttaaggatccttgaagaatcgctcaaataaagaa 8506592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 82 - 114
Target Start/End: Complemental strand, 12820356 - 12820324
Alignment:
Q  82 tcgtgactcaacctagtaacaacttcggtagat 114  Q
    ||||||||||||||||||||||| |||||||||    
T  12820356 tcgtgactcaacctagtaacaacctcggtagat 12820324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 28 - 76
Target Start/End: Complemental strand, 20072157 - 20072109
Alignment:
Q  28 cttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacct 76  Q
    |||||||||||||||| | |||||||||| |||||||  ||||||||||    
T  20072157 cttgcacaattttaggaaatgtcacgaaatgtcttaaagagagcgacct 20072109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 101
Target Start/End: Original strand, 28564848 - 28564927
Alignment:
Q  19 atagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaac 101  Q
    ||||||||||||| ||||||||  ||||||||| |||| || |||   |||||||||   || ||||||||||||||||||||    
T  28564848 atagtctgtcttgaacaattttgagcagtgtcatgaaatgttttatagagagcgacc---tgatcgtgactcaacctagtaac 28564927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 101
Target Start/End: Original strand, 28572471 - 28572550
Alignment:
Q  19 atagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaac 101  Q
    ||||||||||||| ||||||||  ||||||||| |||| || |||   |||||||||   || ||||||||||||||||||||    
T  28572471 atagtctgtcttgaacaattttgagcagtgtcatgaaatgttttatagagagcgacc---tgatcgtgactcaacctagtaac 28572550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 86; Significance: 6e-41; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 3094183 - 3094046
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||| ||||||||||||| ||||||| || ||||||||||||  |||||||||||||   |||||||||||||||||||||||||||||||||||    
T  3094183 gatagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaagagagcgacctggt---cgtgactcaacctagtaacaacttcggtagataat 3094087  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |    |||||||||||||||||||||| |||||||||||||||||    
T  3094086 a----gaatttggaaatccaaatacaacagtttggaaatccaaaa 3094046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 29 - 162
Target Start/End: Complemental strand, 25855229 - 25855103
Alignment:
Q  29 ttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataatagaatgaattt 128  Q
    |||||||||||| ||||||| |||||||||||||||  |||||||||||||   ||||||||||||||||||||||||||||||||||||    ||||||    
T  25855229 ttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggt---cgtgactcaacctagtaacaacttcggtagataata----gaattt 25855137  T
Q  129 ggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |||||||||||||||| ||||||||||| |||||    
T  25855136 ggaaatccaaatacaacagtttggaaattcaaaa 25855103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 22 - 162
Target Start/End: Complemental strand, 10135521 - 10135388
Alignment:
Q  22 gtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataatagaa 121  Q
    ||||| |||||||||||||||| |||| |||||||||||||||  |||||||||||||   |||||||||||||||||||||||||||||||||||||||    
T  10135521 gtctgccttgcacaattttaggtagtgccacgaaacgtcttaaagagagcgacctggt---cgtgactcaacctagtaacaacttcggtagataatagaa 10135425  T
Q  122 tgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
         |||||||||||||||||  ||||||||||| |||||    
T  10135424 c----ttggaaatccaaatacaggagtttggaaatacaaaa 10135388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 23192843 - 23192980
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||| |||| |||||||| ||||||| |||||||||||||||  |||||||||||||   |||||||||||||||||||||||||||||||||||    
T  23192843 gatagtctgccttgtacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggt---cgtgactcaacctagtaacaacttcggtagataat 23192939  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |    ||||||||||| ||||| |||| |||||| ||||||||||    
T  23192940 a----gaatttggaaaaccaaacacaacagtttgaaaatccaaaa 23192980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 47451251 - 47451388
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||||||||||||||||| ||||||| || ||||||||||||  |||||||||   |||||||||||||||||||||| || |||||| ||||||    
T  47451251 gatagtctgtcttgcacaatttttggcagtgccatgaaacgtcttaaagagagcgacc---tggtcgtgactcaacctagtaataatttcggtggataat 47451347  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |    ||||||||||||||||||||||  ||||||||||||||||    
T  47451348 a----gaatttggaaatccaaatacaactgtttggaaatccaaaa 47451388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 51041489 - 51041624
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||| ||||||||||||  ||||||| ||||||||||||||| ||||||||||||||   ||||||||||| |||||||||||||||||||||||    
T  51041489 gatagtctgccttgcacaatttg-ggcagtgccacgaaacgtcttaa-aagagcgacctggt---cgtgactcaacttagtaacaacttcggtagataat 51041583  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |    |||||||||||||||||||||  |||||||||||||||||    
T  51041584 a----gaatttggaaatccaaatacatcagtttggaaatccaaaa 51041624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 33301206 - 33301343
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||||  ||| |||||   ||||||||| |||| ||||||||||||| | ||||||||    
T  33301206 gatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagaacgacc---tggtcgtgattcaagctagtaacaactttgatagataat 33301302  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |    |||||||||||||||||||||| || ||||||||||||||    
T  33301303 a----gaatttggaaatccaaatacaacagattggaaatccaaaa 33301343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 47455412 - 47455549
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    |||| |||||||||||||||||| | || || |||||||||||||||  |||||||||||||   |||||||||||||| ||||||||||||| ||||||    
T  47455412 gataatctgtcttgcacaattttggacattgccacgaaacgtcttaaagagagcgacctggt---cgtgactcaacctaataacaacttcggtggataat 47455508  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |    ||||||||||||||||||||||  ||||||||||||||||    
T  47455509 a----gaatttggaaatccaaatacaactgtttggaaatccaaaa 47455549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 20 - 162
Target Start/End: Complemental strand, 40166047 - 40165912
Alignment:
Q  20 tagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataatag 119  Q
    ||||||| ||||||||||||| ||||||| |||||||||||||||  |||||||| ||||   |||||||||||||||||||||||||||||||||||||    
T  40166047 tagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacatggt---cgtgactcaacctagtaacaacttcggtagataatag 40165951  T
Q  120 aatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |||     ||| ||||||||||||| |||||| ||||| ||||    
T  40165950 aata----tggtaatccaaatacaacagtttgaaaatctaaaa 40165912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 16649639 - 16649775
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    |||||||| |||||||||||||| | ||||| ||| |||||||||||  |||||||||||||   ||||||||||| |||||||||||||||||||||||    
T  16649639 gatagtctatcttgcacaattttggacagtgccac-aaacgtcttaaagagagcgacctggt---cgtgactcaacttagtaacaacttcggtagataat 16649734  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |    |||||||||||| ||||||||| |||||| ||||||||||    
T  16649735 a----gaatttggaaattcaaatacaacagtttgaaaatccaaaa 16649775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 19799039 - 19799176
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||||||||||||||||| |  |||| |||||||||||||||  ||||||| ||| |   |||||||||||||||||||||||||| ||||||||    
T  19799039 gatagtctgtcttgcacaattttggatagtgccacgaaacgtcttaaagagagcgatctgat---cgtgactcaacctagtaacaacttcgatagataat 19799135  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |    ||||||| |||||||||||||| |||||| ||||||||||    
T  19799136 a----gaatttgaaaatccaaatacaacagtttgaaaatccaaaa 19799176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 26927748 - 26927885
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||| ||||||||||||| |||| || |||||||||||||||  ||||||||    | |||||||||||||||||||||||||||||||||||||    
T  26927748 gatagtctgccttgcacaattttgggcaatgccacgaaacgtcttaaagagagcgac---ttagtcgtgactcaacctagtaacaacttcggtagataat 26927844  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |    ||||||  |||||||||||||| |||||| ||||||||||    
T  26927845 a----gaatttaaaaatccaaatacaacagtttgaaaatccaaaa 26927885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 18784575 - 18784712
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||| ||||||||||||||||||||| ||||||| ||||||| |||||||||||| |   |||||||||||||||||||||||||| |||| |||    
T  18784575 gatagtctgccttgcacaattttaggcagtgccacgaaatgtcttaa-aagagcgacctgat---cgtgactcaacctagtaacaacttcgctagaaaat 18784670  T
Q  118 agaatgaatttggaaatccaa-atacaaaagtttggaaatccaaaa 162  Q
    |||||    || |||| |||| |||||| |||||||||||||||||    
T  18784671 agaat----ttagaaaaccaacatacaacagtttggaaatccaaaa 18784712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 17 - 162
Target Start/End: Original strand, 39588392 - 39588530
Alignment:
Q  17 agatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataa 116  Q
    |||||||||||||||||||||||| | ||||| |||||||||||||||  |||||||||   || |||||||| ||||||||||||| |||||| |||||    
T  39588392 agatagtctgtcttgcacaattttggacagtgccacgaaacgtcttaaagagagcgacc---tgatcgtgacttaacctagtaacaatttcggtggataa 39588488  T
Q  117 tagaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    ||     |||||||||||||||||||||   |||||||||||||||    
T  39588489 ta----taatttggaaatccaaatacaactatttggaaatccaaaa 39588530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 81 - 162
Target Start/End: Complemental strand, 25843821 - 25843744
Alignment:
Q  81 gtcgtgactcaacctagtaacaacttcggtagataatagaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    ||||||||||||||||||||||||||||||||||||||    |||||||||||||||||||||| ||||||||||| |||||    
T  25843821 gtcgtgactcaacctagtaacaacttcggtagataata----gaatttggaaatccaaatacaacagtttggaaattcaaaa 25843744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 18 - 115
Target Start/End: Complemental strand, 12260065 - 12259971
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagata 115  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||  ||||||||    |||||||| ||||||| |||||||||||| |||||||    
T  12260065 gatagtctgtcttgcacaattttgggcagtgtcacgaaacgtcttaaagagagcgac---atggtcgtgtctcaaccaagtaacaacttcagtagata 12259971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 16035677 - 16035534
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    |||| |||||||||||||| ||| | ||||| |||||||||| ||||  || ||||||||||   |||||||||||||||||||||||| |||||||| |    
T  16035677 gataatctgtcttgcacaactttggacagtgccacgaaacgtgttaaagagggcgacctggt---cgtgactcaacctagtaacaactttggtagatatt 16035581  T
Q  118 agaat--gaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
        |  ||||||| |||||||||||||| |||||||||||||||||    
T  16035580 cattttagaatttgaaaatccaaatacaacagtttggaaatccaaaa 16035534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 44 - 161
Target Start/End: Complemental strand, 16832144 - 16832034
Alignment:
Q  44 cagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataatagaatgaatttggaaatccaaataca 143  Q
    |||||||||| ||||||||||  |||||||||||||   ||||||||||  ||||||||||||  ||||||||||||||    |||||||||||||||||    
T  16832144 cagtgtcacggaacgtcttaaagagagcgacctggt---cgtgactcaatatagtaacaacttaagtagataatagaat----ttggaaatccaaataca 16832052  T
Q  144 aaagtttggaaatccaaa 161  Q
    |  |||||||||||||||    
T  16832051 acggtttggaaatccaaa 16832034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 22 - 120
Target Start/End: Complemental strand, 10140154 - 10140059
Alignment:
Q  22 gtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataataga 120  Q
    ||||| |||||||||||||  | |||| |||||||||| ||||  ||||||||||| |   ||||||||||||||||||||||||||||||||||||||    
T  10140154 gtctgccttgcacaattttgagtagtgccacgaaacgtgttaaagagagcgacctgat---cgtgactcaacctagtaacaacttcggtagataataga 10140059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 38620761 - 38620625
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||| ||||||||||||| | || || |||||||||||||||  |||| || |   |||||| ||||||||||| ||| ||||||||||||||||    
T  38620761 gatagtctgccttgcacaattttggacaatg-cacgaaacgtcttaaagagagtgatc---tggtcgcgactcaacctaataataacttcggtagataat 38620666  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |     ||||||||||||||||||||| |||||| |||| |||||    
T  38620665 a----aaatttggaaatccaaatacaacagtttgaaaattcaaaa 38620625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 18 - 115
Target Start/End: Complemental strand, 8900323 - 8900229
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagata 115  Q
    |||||| ||| |||||||| ||||| ||||||||| |||||| ||||  |||||||  ||||   |||||||||||||||||||||||||||||||||    
T  8900323 gatagtatgttttgcacaactttagacagtgtcacaaaacgttttaaagagagcgatatggt---cgtgactcaacctagtaacaacttcggtagata 8900229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 12906223 - 12906166
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacct 76  Q
    ||||||||| ||||||||||||| ||||||| |||||||||||||||  ||||||||||    
T  12906223 gatagtctg-cttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacct 12906166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 33380947 - 33381004
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacct 76  Q
    ||||||||| |||||||||||||  ||||||||||||||||||||||  ||||||||||    
T  33380947 gatagtctg-cttgcacaattttgagcagtgtcacgaaacgtcttaaagagagcgacct 33381004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 28 - 100
Target Start/End: Original strand, 2493853 - 2493923
Alignment:
Q  28 cttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaa 100  Q
    ||||||||||||| ||||||| |||||||||||||||  |||||||||| ||  | | |||||||||||||||    
T  2493853 cttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctagt--ttgcgactcaacctagtaa 2493923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 115
Target Start/End: Complemental strand, 11806428 - 11806334
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagata 115  Q
    ||||||||| |||| || | |||  ||||||||||||||| ||||||  ||||||| ||||| ||   ||||||||||| ||||||||||| ||||||    
T  11806428 gatagtctgccttgtaccactttgcgcagtgtcacgaaacatcttaaagagagcgatctggttgt---gactcaacctaataacaacttcgatagata 11806334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 24159825 - 24159882
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacct 76  Q
    ||||||||| ||||||||||||| |||||| | ||||||||||||||  ||||||||||    
T  24159825 gatagtctg-cttgcacaattttgggcagtattacgaaacgtcttaaagagagcgacct 24159882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 166 - 240
Target Start/End: Complemental strand, 248245 - 248169
Alignment:
Q  166 gttgagaatgttatgtaattctcgaagaattaatttatt--tttaaaggatccctgaatgatcgctcaaataaagaa 240  Q
    |||| |||||| ||||| || |||||| |||||||| ||  ||| ||||||||| ||| ||||||||||||||||||    
T  248245 gttgtgaatgtaatgtagttatcgaaggattaatttgttgtttttaaggatccccgaaggatcgctcaaataaagaa 248169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 79; Significance: 9e-37; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 8076119 - 8075981
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||  |||||||||   |||||||||||||||| |||||||||||| |||||||||    
T  8076119 gatagtctgtcttgcacaattttaggcagtgccacgaaacgtcttaaagagagcgacc---tggtcgtgactcaacccagtaacaacttcagtagataat 8076023  T
Q  118 agaatgaatttggaaatcc-aaatacaaaagtttggaaatccaaaa 162  Q
    |    ||||||||||| || |||||||| |||||||||||||||||    
T  8076022 a----gaatttggaaaaccaaaatacaacagtttggaaatccaaaa 8075981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 4930302 - 4930165
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    |||||| || ||| ||||||||| ||||||| |||||||||||||||  |||||||||||||   |||||||||||||||||||||||||||||||||||    
T  4930302 gatagtatgacttacacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggt---cgtgactcaacctagtaacaacttcggtagataat 4930206  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |    |||||||||||||||||||||| ||||||||||| |||||    
T  4930205 a----gaatttggaaatccaaatacaacagtttggaaattcaaaa 4930165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 8268362 - 8268225
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||||||||||||||||| | ||||| ||| |||||||||||  |||||||||   ||||||||||||||  |||||||||||||||||||||||    
T  8268362 gatagtctgtcttgcacaattttggacagtgccacaaaacgtcttaaagagagcgacc---tggtcgtgactcaatatagtaacaacttcggtagataat 8268266  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |    |||||||||||| ||||||||| |||||||||||||||||    
T  8268265 a----gaatttggaaatgcaaatacaacagtttggaaatccaaaa 8268225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 18 - 157
Target Start/End: Complemental strand, 26341268 - 26341136
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||| ||||||||||||| ||||||| ||||||| |||||||  |||||||||||||   |||||||||||||||||||||||||||||||||||    
T  26341268 gatagtctgccttgcacaattttgggcagtgccacgaaatgtcttaaagagagcgacctggt---cgtgactcaacctagtaacaacttcggtagataat 26341172  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatc 157  Q
    |    || ||||||||||||||||||| |||||| |||||    
T  26341171 a----gattttggaaatccaaatacaacagtttgaaaatc 26341136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 9650993 - 9651131
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||||  |||||||||   ||||||||||||||||||||||||||||||||||| ||     
T  9650993 gatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacc---tggtcgtgactcaacctagtaacaacttcggtagaaaac 9651089  T
Q  118 agaatgaatttggaaatcc-aaatacaaaagtttggaaatccaaaa 162  Q
    |    ||||||||||| || |||||||| |||||| ||||||||||    
T  9651090 a----gaatttggaaaaccaaaatacaacagtttgaaaatccaaaa 9651131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 13314262 - 13314399
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||  ||||||||||||| ||||||  |||||||||||||||  ||||||| |||||   ||||||||||||||||||||||| ||||||||| |    
T  13314262 gatagtctaccttgcacaattttgggcagtaccacgaaacgtcttaaagagagcgatctggt---cgtgactcaacctagtaacaactacggtagatagt 13314358  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |    |||||||||||||||||||||| |||||||||| ||||||    
T  13314359 a----gaatttggaaatccaaatacaacagtttggaaacccaaaa 13314399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 44423163 - 44423301
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||| |||| |||||||| | ||||| |||||||||||||||  ||||||| ||| |   |||||||||||||||||||||||| ||||||||||    
T  44423163 gatagtctgccttgaacaattttggtcagtgccacgaaacgtcttaaagagagcgatctgat---cgtgactcaacctagtaacaactttggtagataat 44423259  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |||||   || |||||||||||||||| |||||| ||||||||||    
T  44423260 agaat---ttgggaaatccaaatacaacagtttgaaaatccaaaa 44423301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 18 - 114
Target Start/End: Complemental strand, 4579577 - 4579484
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagat 114  Q
    ||||||||| ||||||||||||| ||||||| |||||||||||||||  |||||||||   |||||||||||||||||||||||||||||| |||||    
T  4579577 gatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacc---tggtcgtgactcaacctagtaacaacttcgatagat 4579484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 42627223 - 42627361
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacct-agtaacaacttcggtagataa 116  Q
    |||||||||  |||||||||||| ||  ||| |||||||||||||||  |||||||||   ||||||||| ||||||| |||||||||||||||||||||    
T  42627223 gatagtctgctttgcacaattttgggttgtgccacgaaacgtcttaaagagagcgacc---tggtcgtgaatcaacctaagtaacaacttcggtagataa 42627319  T
Q  117 tagaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    ||    |||||||||||| ||||||||| ||||||||||| |||||    
T  42627320 ta----gaatttggaaattcaaatacaacagtttggaaattcaaaa 42627361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 18 - 122
Target Start/End: Original strand, 44510703 - 44510804
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||||||||||||||||| | ||||| ||| |||||||||||  ||||| | |   |||||||||||||||||||||||||||||||||||||||    
T  44510703 gatagtctgtcttgcacaattttggacagtgccacaaaacgtcttaaagagagcaatc---tggtcgtgactcaacctagtaacaacttcggtagataat 44510799  T
Q  118 agaat 122  Q
    |||||    
T  44510800 agaat 44510804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 19 - 162
Target Start/End: Complemental strand, 30256922 - 30256786
Alignment:
Q  19 atagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataata 118  Q
    ||||||||  |||||||||||| ||||||| ||||||| ||||||| || ||||| |||||   ||||||||||||| |||| |||||||||||||||||    
T  30256922 atagtctgctttgcacaattttgggcagtgccacgaaatgtcttaaaaacagcgatctggt---cgtgactcaaccttgtaaaaacttcggtagataata 30256826  T
Q  119 gaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
        ||||||| |||||||||||||| |||||  ||||||||||    
T  30256825 ----gaatttgcaaatccaaatacaatagtttataaatccaaaa 30256786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 18 - 111
Target Start/End: Complemental strand, 29151003 - 29150913
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggta 111  Q
    |||||| || |||||||||||||  |||||||||||||||||||||| |||||||| |   |||||||||||||||||||||||||||||||||    
T  29151003 gatagtttgccttgcacaattttgagcagtgtcacgaaacgtcttaaaaagagcgatc---tggtcgtgactcaacctagtaacaacttcggta 29150913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 114
Target Start/End: Original strand, 23246959 - 23247052
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagat 114  Q
    ||||||||| ||||||||||||| ||||||| |||||||| ||||||  |||||||||   |||||||||||||| |||||||||||||||||||||    
T  23246959 gatagtctgccttgcacaattttgggcagtgccacgaaacatcttaaagagagcgacc---tggtcgtgactcaatctagtaacaacttcggtagat 23247052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 27238311 - 27238173
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||| ||| |||||||||  |||||| ||| |||||||||||  |||||||||||||   |||||||||||||||||||||||||  ||||||||    
T  27238311 gatagtctgccttacacaattttgagcagtgccacaaaacgtcttaaagagagcgacctggt---cgtgactcaacctagtaacaacttccatagataat 27238215  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    ||| |   ||   |||||||||||||| ||||| |||||||||||    
T  27238214 agagt---ttgaaaaatccaaatacaatagtttagaaatccaaaa 27238173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 18 - 115
Target Start/End: Original strand, 3357658 - 3357752
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagata 115  Q
    ||||||||| ||||||||| ||| ||| ||  | |||||||||||||  |||||||||||||   |||||||||||||||||||||||||||||||||    
T  3357658 gatagtctgccttgcacaactttgggctgtaccgcgaaacgtcttaaagagagcgacctggt---cgtgactcaacctagtaacaacttcggtagata 3357752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 23866137 - 23866076
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggt 79  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||||  |||||||||||||    
T  23866137 gatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggt 23866076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 18 - 115
Target Start/End: Complemental strand, 12254148 - 12254054
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagata 115  Q
    ||||||||| ||||||||| ||||||||||| ||| |||| ||||||  |||||||||   |||||| |||||||||| |||||||||||| ||||||    
T  12254148 gatagtctgccttgcacaactttaggcagtgccacaaaacatcttaaagagagcgacc---tggtcgcgactcaacctggtaacaacttcgatagata 12254054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 18 - 108
Target Start/End: Original strand, 25543388 - 25543475
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcg 108  Q
    |||||| | |||||||||||||||||||||  |||||||||||||||  || ||||||   || | |||||||||||||||||||||||||    
T  25543388 gatagtttatcttgcacaattttaggcagtaccacgaaacgtcttaaagagtgcgacc---tgattgtgactcaacctagtaacaacttcg 25543475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 54 - 115
Target Start/End: Original strand, 10388427 - 10388485
Alignment:
Q  54 aaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagata 115  Q
    |||||||||||  |||||||||||||   |||||||||||||||||||||||||||||||||    
T  10388427 aaacgtcttaaagagagcgacctggt---cgtgactcaacctagtaacaacttcggtagata 10388485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 79 - 162
Target Start/End: Original strand, 26287242 - 26287333
Alignment:
Q  79 tggtcgtgactcaacctagtaacaacttcggtagataat-------agaat-gaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    ||||||||||||||||||||||||||||||||||| | |       | ||| |||||||||||||||||||||| ||||| |||||||||||    
T  26287242 tggtcgtgactcaacctagtaacaacttcggtagagattatttttcaaaatagaatttggaaatccaaatacaacagttttgaaatccaaaa 26287333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 111
Target Start/End: Complemental strand, 9008232 - 9008142
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggta 111  Q
    ||||| ||| |||||||||||||  | |||||||| |||||||||||  |||| |||    |||||||||||||||||||||||||||| ||||    
T  9008232 gatagcctgccttgcacaattttgagtagtgtcactaaacgtcttaaagagagggac---atggtcgtgactcaacctagtaacaactttggta 9008142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 107
Target Start/End: Complemental strand, 16372466 - 16372381
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttc 107  Q
    ||||||||||||||||| || || || |||| |||||||| ||||||  |||||||| ||||   |||||||||||||||||||||||||    
T  16372466 gatagtctgtcttgcacgatctt-ggtagtgccacgaaacatcttaaagagagcgacttggt---cgtgactcaacctagtaacaacttc 16372381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 15642303 - 15642244
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctg 77  Q
    |||||| |||||| ||||||||| |  ||||||| |||||||||||| ||||||||||||    
T  15642303 gatagtttgtcttccacaattttggatagtgtcatgaaacgtcttaaaaagagcgacctg 15642244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 6591009 - 6591054
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtctta 63  Q
    ||||||||| ||||||||||||||| ||||| ||| ||||||||||    
T  6591009 gatagtctgccttgcacaattttagacagtgccacaaaacgtctta 6591054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 29478181 - 29478224
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtctt 62  Q
    |||||||||| |||||||||||| ||||||| |||||||||||||    
T  29478181 gatagtctgt-ttgcacaattttgggcagtgccacgaaacgtctt 29478224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 78; Significance: 4e-36; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 8747851 - 8747714
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||| ||||||||||||||||| |||||||||||| ||||||||||  |||||||||   |||||||||||||||||||||||||||||  ||||||||    
T  8747851 gatagcctgtcttgcacaattttgggcagtgtcacggaacgtcttaaagagagcgacc---tggtcgtgactcaacctagtaacaacttcaatagataat 8747755  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |    |||||||||||||||||||||| |||||| ||||||||||    
T  8747754 a----gaatttggaaatccaaatacaacagtttgtaaatccaaaa 8747714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 6407886 - 6408023
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    |||||||||  ||| |||||||| ||||||| ||||||||||||| |  ||||||||||| |   |||||||||||||||||||||||||||||||||||    
T  6407886 gatagtctgctttgtacaattttgggcagtgccacgaaacgtcttcaagagagcgacctgat---cgtgactcaacctagtaacaacttcggtagataat 6407982  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |    |||||||||||||||||||||| |||||||||||||||||    
T  6407983 a----gaatttggaaatccaaatacaacagtttggaaatccaaaa 6408023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 19674382 - 19674245
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||||||||||||||||| ||||||| || ||||||||||||  |||| ||||||||   ||||||||||||||||||||||||||||| |||||    
T  19674382 gatagtctgtcttgcacaattttgggcagtgccatgaaacgtcttaaagagagtgacctggt---cgtgactcaacctagtaacaacttcggtaaataat 19674286  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |    ||||||| |||||||||||||| |||||| ||||||||||    
T  19674285 a----gaatttgaaaatccaaatacaacagtttgaaaatccaaaa 19674245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 29 - 162
Target Start/End: Original strand, 25316603 - 25316733
Alignment:
Q  29 ttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataatagaatgaattt 128  Q
    |||||||||||| ||||||| ||| |||||||||||   ||||||||||||   || ||||||| |||||||||| ||||||||||||||||||||||||    
T  25316603 ttgcacaattttgggcagtgccacaaaacgtcttaaattgagcgacctggt---cgcgactcaatctagtaacaatttcggtagataatagaatgaattt 25316699  T
Q  129 ggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    ||||||||||||| || ||||||||||| |||||    
T  25316700 ggaaatccaaatataatagtttggaaattcaaaa 25316733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 29 - 162
Target Start/End: Original strand, 26204097 - 26204227
Alignment:
Q  29 ttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataatagaatgaattt 128  Q
    |||||||||||| ||||||| ||| |||||||||||   ||||||||||||   || ||||||| |||||||||| ||||||||||||||||||||||||    
T  26204097 ttgcacaattttgggcagtgccacaaaacgtcttaaattgagcgacctggt---cgcgactcaatctagtaacaatttcggtagataatagaatgaattt 26204193  T
Q  129 ggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    ||||||||||||| || ||||||||||| |||||    
T  26204194 ggaaatccaaatataatagtttggaaattcaaaa 26204227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 12689040 - 12688903
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||| ||||||||||||| |||||| |||| |||||||||||  |||| ||||||||   | |||||||||||||||||||||||||| ||||||    
T  12689040 gatagtctgccttgcacaattttgggcagtatcacaaaacgtcttaaagagagtgacctggt---catgactcaacctagtaacaacttcggtggataat 12688944  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |    |||||||||||||||||||||| |||||| ||||||||||    
T  12688943 a----gaatttggaaatccaaatacaacagtttgaaaatccaaaa 12688903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 22 - 156
Target Start/End: Original strand, 11570779 - 11570906
Alignment:
Q  22 gtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataatagaa 121  Q
    ||||| ||||||||||||| ||||||| |||||||||||||||  ||||||||||||| ||   |||||||||||||||||||||||||||||||||       
T  11570779 gtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggttgt---gactcaacctagtaacaacttcggtagataata--- 11570872  T
Q  122 tgaatttggaaatccaaatacaaaagtttggaaat 156  Q
     |||||| ||||||||||||||| |||||| ||||    
T  11570873 -gaatttcgaaatccaaatacaacagtttgaaaat 11570906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 33687629 - 33687766
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||||||||||||||||| | ||||| |||||||||||||||  ||||||||||||||   || |||||||||| |||||| ||||||||||||     
T  33687629 gatagtctgtcttgcacaattttggccagtgccacgaaacgtcttaaagagagcgacctggtg---gtaactcaacctaataacaatttcggtagataac 33687725  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |     |||||  |||||||||||||| |||||||||||||||||    
T  33687726 a----aaatttaaaaatccaaatacaacagtttggaaatccaaaa 33687766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 18 - 122
Target Start/End: Original strand, 2700132 - 2700233
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    |||||||||||||||||||||||   ||||| |||||||||||||||  ||||||| |||||   ||||||||||||||||||||||||||||||||| |    
T  2700132 gatagtctgtcttgcacaattttgaacagtgccacgaaacgtcttaaagagagcgatctggt---cgtgactcaacctagtaacaacttcggtagatagt 2700228  T
Q  118 agaat 122  Q
    |||||    
T  2700229 agaat 2700233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 23 - 163
Target Start/End: Complemental strand, 11428108 - 11427974
Alignment:
Q  23 tctgtcttgcacaa-ttttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataatagaa 121  Q
    |||| ||||||||| |||| ||||||| |||||||||||||||  |||||||||||||   |||||||||| ||| |||||||||||||| ||||||       
T  11428108 tctgccttgcacaacttttgggcagtgccacgaaacgtcttaaagagagcgacctggt---cgtgactcaatctaataacaacttcggtaaataata--- 11428015  T
Q  122 tgaatttggaaatccaaatacaaaagtttggaaatccaaaac 163  Q
      |||||| |||||||||||||| ||||||||||||||||||    
T  11428014 -aaatttgaaaatccaaatacaatagtttggaaatccaaaac 11427974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 48 - 162
Target Start/End: Original strand, 11534734 - 11534841
Alignment:
Q  48 gtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataatagaatgaatttggaaatccaaatacaaaag 147  Q
    |||||||||||||||||  |||||||||||||   | ||||||||||||||||||||||| ||||||||||    |||||| ||||||||||||||| ||    
T  11534734 gtcacgaaacgtcttaaagagagcgacctggt---cttgactcaacctagtaacaacttcagtagataata----gaatttcgaaatccaaatacaacag 11534826  T
Q  148 tttggaaatccaaaa 162  Q
    |||| ||||||||||    
T  11534827 tttgaaaatccaaaa 11534841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 48 - 162
Target Start/End: Original strand, 11560244 - 11560351
Alignment:
Q  48 gtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataatagaatgaatttggaaatccaaatacaaaag 147  Q
    |||||||||||||||||  |||||||||||||   | ||||||||||||||||||||||| ||||||||||    |||||| ||||||||||||||| ||    
T  11560244 gtcacgaaacgtcttaaagagagcgacctggt---cttgactcaacctagtaacaacttcagtagataata----gaatttcgaaatccaaatacaacag 11560336  T
Q  148 tttggaaatccaaaa 162  Q
    |||| ||||||||||    
T  11560337 tttgaaaatccaaaa 11560351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 21309100 - 21308966
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    |||||||||  |||||||||||| ||||||| || ||||||||||||  |||||||     |||| ||||||||||||||||||||||||| ||||||||    
T  21309100 gatagtctgcattgcacaattttgggcagtgccatgaaacgtcttaaagagagcga---tatggtagtgactcaacctagtaacaacttcgatagataat 21309004  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |    ||||||||||||||||||||   |||||| ||||||||||    
T  21309003 a----gaatttggaaatccaaatac---agtttgaaaatccaaaa 21308966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 28 - 162
Target Start/End: Original strand, 13736714 - 13736854
Alignment:
Q  28 cttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat-------aga 120  Q
    ||||||||||||||||||||| ||||||||||| |||  |||| |||||||||   | |||||||||||||||||||||||||| ||| |       | |    
T  13736714 cttgcacaattttaggcagtgccacgaaacgtcgtaaagagagggacctggtg---gcgactcaacctagtaacaacttcggtaaatattctttttcaaa 13736810  T
Q  121 at--gaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    ||  |||||||||||||||||||||||  |||||||||||||||    
T  13736811 ataagaatttggaaatccaaatacaaagttttggaaatccaaaa 13736854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 18 - 163
Target Start/End: Original strand, 29892287 - 29892436
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtaga---- 113  Q
    |||||| |||||||||||||||| ||||||| ||| |||| ||||||  |||||||||||     |||||||||||||||||||||||||| ||||        
T  29892287 gatagtttgtcttgcacaattttgggcagtgccaccaaacttcttaaagagagcgacctgac---cgtgactcaacctagtaacaacttcgatagatatt 29892383  T
Q  114 ---taatagaatgaatttggaaatccaaatacaaaagtttggaaatccaaaac 163  Q
       ||| | | ||||||| ||||||||||||||| |||||  |||||||||||    
T  29892384 ctttaaaaaactgaatttagaaatccaaatacaacagtttataaatccaaaac 29892436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 18 - 111
Target Start/End: Original strand, 12406379 - 12406469
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggta 111  Q
    ||||||||  ||||||||| |||||||| || ||||||||||||| |  |||||||||   |||||||||||||| ||||||||||||||||||    
T  12406379 gatagtcttccttgcacaactttaggcactgccacgaaacgtctttaagagagcgacc---tggtcgtgactcaatctagtaacaacttcggta 12406469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 99 - 162
Target Start/End: Original strand, 17964634 - 17964693
Alignment:
Q  99 aacaacttcggtagataatagaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    ||||||||||||||||||||||||    |||||||||||||||||| |||||||||||||||||    
T  17964634 aacaacttcggtagataatagaat----ttggaaatccaaatacaacagtttggaaatccaaaa 17964693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 18 - 114
Target Start/End: Original strand, 24589190 - 24589283
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagat 114  Q
    |||||||| |||||||||||||| |  ||||||||||||||| ||||  ||||||| |   || |||||||||||| |||||||||||||| |||||    
T  24589190 gatagtctatcttgcacaattttggaaagtgtcacgaaacgttttaaagagagcgatc---tgatcgtgactcaacttagtaacaacttcgatagat 24589283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 30 - 76
Target Start/End: Complemental strand, 14041749 - 14041703
Alignment:
Q  30 tgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacct 76  Q
    |||||||||||||||||||||||||||||| ||||  ||||||||||    
T  14041749 tgcacaattttaggcagtgtcacgaaacgttttaaagagagcgacct 14041703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 22609526 - 22609486
Alignment:
Q  123 gaatttggaaatccaaatacaaaagtttggaaatccaaaac 163  Q
    |||||||||||||||||||||| |||| |||||||||||||    
T  22609526 gaatttggaaatccaaatacaatagttcggaaatccaaaac 22609486  T

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Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 64
Target Start/End: Original strand, 16836182 - 16836228
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaa 64  Q
    ||||||||| |||| |||||||| ||||||| |||||||||||||||    
T  16836182 gatagtctgccttgtacaattttgggcagtgccacgaaacgtcttaa 16836228  T

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Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 35129697 - 35129640
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacct 76  Q
    ||||||||| ||||||||||||| ||||||| || ||||||||||||  ||||||||||    
T  35129697 gatagtctg-cttgcacaattttgggcagtgccatgaaacgtcttaaagagagcgacct 35129640  T

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Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 82 - 115
Target Start/End: Original strand, 11614179 - 11614212
Alignment:
Q  82 tcgtgactcaacctagtaacaacttcggtagata 115  Q
    ||||||||||||||||||||||||||| ||||||    
T  11614179 tcgtgactcaacctagtaacaacttcgatagata 11614212  T

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Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 83 - 116
Target Start/End: Original strand, 19995439 - 19995472
Alignment:
Q  83 cgtgactcaacctagtaacaacttcggtagataa 116  Q
    |||||||||||||||||||||||| |||||||||    
T  19995439 cgtgactcaacctagtaacaactttggtagataa 19995472  T

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Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 79 - 107
Target Start/End: Original strand, 2882839 - 2882867
Alignment:
Q  79 tggtcgtgactcaacctagtaacaacttc 107  Q
    |||||||||||||||||||||||||||||    
T  2882839 tggtcgtgactcaacctagtaacaacttc 2882867  T

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Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 166 - 206
Target Start/End: Complemental strand, 17273780 - 17273740
Alignment:
Q  166 gttgagaatgttatgtaattctcgaagaattaatttatttt 206  Q
    ||||||||||| || ||||||||||||||||||||| ||||    
T  17273780 gttgagaatgtaatctaattctcgaagaattaatttgtttt 17273740  T

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Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 79 - 115
Target Start/End: Original strand, 20748368 - 20748404
Alignment:
Q  79 tggtcgtgactcaacctagtaacaacttcggtagata 115  Q
    |||||||||||||||||||||||||||| | ||||||    
T  20748368 tggtcgtgactcaacctagtaacaactttgatagata 20748404  T

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Target: scaffold0054 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 18 - 161
Target Start/End: Complemental strand, 25468 - 25332
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||  |||| |||||  | ||   ||||||||||||||||||||||| ||||||||    
T  25468 gatagtctgtcttgcacaattttacgcagtgtcacgtaacgtcttaaagagagtgacctaattgt---gactcaacctagtaacaacttcgatagataat 25372  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaa 161  Q
    |    |||||||||||||||||||||  |||||| |||||||||    
T  25371 a----gaatttggaaatccaaatacagcagtttgaaaatccaaa 25332  T

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Target: scaffold0045 (Bit Score: 59; Significance: 8e-25; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 83135 - 82997
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||| |||||| |||||| ||  |||||||||||||||||||  |||||||||||||   ||||||||||||||||||||||||||||||| ||     
T  83135 gatagtctgccttgcataattttgggtggtgtcacgaaacgtcttaaagagagcgacctggt---cgtgactcaacctagtaacaacttcggtagaaaac 83039  T
Q  118 agaatgaatttggaaatcc-aaatacaaaagtttggaaatccaaaa 162  Q
    |    ||||||||||| || |||||||| ||||| |||||||||||    
T  83038 a----gaatttggaaaaccaaaatacaacagtttagaaatccaaaa 82997  T

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Target: scaffold0012 (Bit Score: 59; Significance: 8e-25; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 166112 - 166250
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    |||||| |||||||||||||||| ||||||| |||||||||||||||  |||||||||   |||| |||||||||||||||| ||| ||||||||| ||     
T  166112 gatagtatgtcttgcacaatttttggcagtgccacgaaacgtcttaaagagagcgacc---tggttgtgactcaacctagtatcaatttcggtagaaaac 166208  T
Q  118 agaatgaatttggaaatcc-aaatacaaaagtttggaaatccaaaa 162  Q
    |    ||||||||||| || |||||||| |||||||||||||||||    
T  166209 a----gaatttggaaaaccaaaatacaacagtttggaaatccaaaa 166250  T

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Target: scaffold0057 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 35703 - 35566
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagataat 117  Q
    ||||||||| ||||||||||||| | |||||||||||||||||||||  |||||| |    ||||||| ||| ||||||||||||||||| ||| |||||    
T  35703 gatagtctgccttgcacaattttggccagtgtcacgaaacgtcttaaagagagcggc---atggtcgtaacttaacctagtaacaacttcagtaaataat 35607  T
Q  118 agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    |    |||||||||||||||||||||| |||||| |||| |||||    
T  35606 a----gaatttggaaatccaaatacaacagtttgaaaatgcaaaa 35566  T

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Target: scaffold0097 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 18 - 115
Target Start/End: Complemental strand, 15353 - 15259
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagata 115  Q
    |||||||||||||||||||||||  ||||||  ||||||| |||||| | ||| ||  ||||   |||||||||||||||||||||||||||||||||    
T  15353 gatagtctgtcttgcacaattttgagcagtgctacgaaacatcttaaaaggagtgatatggt---cgtgactcaacctagtaacaacttcggtagata 15259  T

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Target: scaffold0018 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 171741 - 171798
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacct 76  Q
    ||||||||| ||||||||||||||||||||| |||||||||||||||  ||||||||||    
T  171741 gatagtctg-cttgcacaattttaggcagtgccacgaaacgtcttaaagagagcgacct 171798  T

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Target: scaffold0240 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 79 - 115
Target Start/End: Complemental strand, 4002 - 3966
Alignment:
Q  79 tggtcgtgactcaacctagtaacaacttcggtagata 115  Q
    |||||||||||||||||||||||||||||||||||||    
T  4002 tggtcgtgactcaacctagtaacaacttcggtagata 3966  T

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Target: scaffold2020 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold2020
Description:

Target: scaffold2020; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 440 - 289
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagta---acaacttcggtagat 114  Q
    |||||| |||||||||||| ||| | || || || |||||||||||| || ||||||    | |||||||||||||||||||   |||||||||||||||    
T  440 gatagtgtgtcttgcacaactttggacaatgccatgaaacgtcttaaaaaaagcgac---atagtcgtgactcaacctagtaattacaacttcggtagat 344  T
Q  115 aat-------agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    | |       | || |||||| |||||| |||||||| |||||||||||||||||    
T  343 attctttttcaaaaagaatttcgaaatctaaatacaacagtttggaaatccaaaa 289  T

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Target: scaffold0009 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 165055 - 165206
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagta---acaacttcggtagat 114  Q
    |||||| |||||||||||| ||| | || || || |||||||||||| || ||||||    | |||||||||||||||||||   |||||||||||||||    
T  165055 gatagtgtgtcttgcacaactttggacaatgccatgaaacgtcttaaaaaaagcgac---atagtcgtgactcaacctagtaattacaacttcggtagat 165151  T
Q  115 aat-------agaatgaatttggaaatccaaatacaaaagtttggaaatccaaaa 162  Q
    | |       | || |||||| |||||| |||||||| |||||||||||||||||    
T  165152 attctttttcaaaaagaatttcgaaatctaaatacaacagtttggaaatccaaaa 165206  T

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Target: scaffold0008 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 115
Target Start/End: Complemental strand, 255886 - 255792
Alignment:
Q  18 gatagtctgtcttgcacaattttaggcagtgtcacgaaacgtcttaagaagagcgacctggtggtcgtgactcaacctagtaacaacttcggtagata 115  Q
    |||||| |||||||||||||||| || |||| |||||||| ||||||  |||| ||||   |||||||| || ||| ||||||||| || ||||||||    
T  255886 gatagtatgtcttgcacaattttgggtagtgccacgaaacctcttaaagagagtgacc---tggtcgtgtcttaacatagtaacaaatttggtagata 255792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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