View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6471_low_10 (Length: 272)
Name: NF6471_low_10
Description: NF6471
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6471_low_10 |
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Alignment Details
Target: chr7 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 19 - 259
Target Start/End: Complemental strand, 4856282 - 4856042
Alignment:
| Q |
19 |
acgcataagttttcattgcaattttgttctcctaattttccccaattgctaggatttcagaattctgaaatcatcttccaatttcttttcgacattggtt |
118 |
Q |
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| T |
4856282 |
acgcataagttttcattgcaattttgttctcctaattttccccaattgctaggatttcagaattctgaaatcatcttccaatttcttttcgacattggtt |
4856183 |
T |
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| Q |
119 |
ataataatgtcatgtgttgataaaatgctattgagaacacattgcaatgattaggtgtcatgtattgttgaaatggtttctcattgtttgtagttaaaat |
218 |
Q |
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| T |
4856182 |
ataataatgtcatgtgttgataaaatgctattgagaacacattgcaatgattaggtgtcatgtattgttgaaatggtttctcattgtttgtagttaaaat |
4856083 |
T |
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| Q |
219 |
actagagaaaccaaacatatgatatatagttatgaggagaa |
259 |
Q |
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| T |
4856082 |
actagagaaaccaaacatatgatatatagttatgaggagaa |
4856042 |
T |
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