View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6473_high_25 (Length: 287)
Name: NF6473_high_25
Description: NF6473
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6473_high_25 |
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Alignment Details
Target: chr7 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 270
Target Start/End: Complemental strand, 46259289 - 46259012
Alignment:
| Q |
1 |
aaagcagaaataaatcaatattttatattccaattcagaaacatatacaccgtttcattttgtgtggtggaatggaatcctcttatggaacttaatatat |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46259289 |
aaagcagaaataaatcaatattttatattccaattcagaaacatatacaccgtttcattttgtgtggtggaatggaatcctcttatggaacttaatatat |
46259190 |
T |
|
| Q |
101 |
atactattaagaaagcttaaactgttaannnnnnnctctcaagttgatttaaacaattagtgctttattgcataaca--------cagtaatggccacgc |
192 |
Q |
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|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
46259189 |
atactattaagaaagcttaaactgttaatttttttctctcaagttgatttaaacaattagtgctttattgcataacacagtagttcagtaatggccacgc |
46259090 |
T |
|
| Q |
193 |
ttggctactgnnnnnnncaccagccttttctgatttctatatccatattcagtttgatccatttgcatatagtatatt |
270 |
Q |
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|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46259089 |
ttggctactgtttttttcaccagccttttctgatttctatatccatattcagtttgatccatttgcatatagtatatt |
46259012 |
T |
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