View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6477_high_13 (Length: 283)

Name: NF6477_high_13
Description: NF6477
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6477_high_13
NF6477_high_13
[»] chr8 (24 HSPs)
chr8 (1-272)||(42469830-42470101)
chr8 (1-106)||(42854107-42854212)
chr8 (1-106)||(40813398-40813503)
chr8 (4-104)||(8932779-8932879)
chr8 (1-106)||(2796627-2796732)
chr8 (1-106)||(11523826-11523931)
chr8 (1-106)||(36565344-36565449)
chr8 (1-104)||(26905009-26905112)
chr8 (1-106)||(12491241-12491346)
chr8 (1-106)||(36545223-36545328)
chr8 (2-106)||(21121220-21121324)
chr8 (170-272)||(42477233-42477336)
chr8 (1-106)||(36395052-36395157)
chr8 (1-106)||(39946931-39947036)
chr8 (1-79)||(2027631-2027709)
chr8 (28-106)||(12025863-12025941)
chr8 (4-106)||(18125247-18125348)
chr8 (1-106)||(37077825-37077930)
chr8 (2-53)||(14742183-14742234)
chr8 (18-106)||(18751996-18752084)
chr8 (4-92)||(45419323-45419411)
chr8 (2-103)||(8879548-8879649)
chr8 (5-58)||(28169514-28169567)
chr8 (39-96)||(43904806-43904863)
[»] chr7 (36 HSPs)
chr7 (1-106)||(43281748-43281853)
chr7 (1-106)||(29650458-29650563)
chr7 (1-106)||(24598290-24598395)
chr7 (1-106)||(12841378-12841483)
chr7 (1-106)||(33349909-33350014)
chr7 (1-106)||(35559096-35559201)
chr7 (1-106)||(37618019-37618124)
chr7 (1-106)||(11594034-11594139)
chr7 (1-106)||(44855275-44855380)
chr7 (1-106)||(49029350-49029455)
chr7 (1-106)||(13859111-13859216)
chr7 (1-106)||(31005297-31005402)
chr7 (1-106)||(31682705-31682810)
chr7 (1-106)||(36652066-36652171)
chr7 (1-104)||(34869496-34869599)
chr7 (5-106)||(35906308-35906409)
chr7 (3-106)||(2885827-2885930)
chr7 (28-106)||(32631650-32631728)
chr7 (1-106)||(39906475-39906578)
chr7 (4-96)||(22349704-22349796)
chr7 (4-96)||(46355962-46356054)
chr7 (28-106)||(38607078-38607156)
chr7 (1-106)||(45836585-45836688)
chr7 (1-106)||(43491382-43491487)
chr7 (1-106)||(6374942-6375047)
chr7 (2-94)||(36869348-36869440)
chr7 (32-106)||(33073026-33073100)
chr7 (1-78)||(7273202-7273279)
chr7 (4-106)||(31681126-31681225)
chr7 (33-95)||(23404502-23404564)
chr7 (1-63)||(38900074-38900136)
chr7 (1-63)||(40980031-40980093)
chr7 (1-96)||(28628036-28628131)
chr7 (2-85)||(36136859-36136942)
chr7 (39-92)||(1011135-1011188)
chr7 (39-92)||(7189361-7189414)
[»] chr1 (33 HSPs)
chr1 (1-106)||(696343-696448)
chr1 (1-106)||(4001558-4001663)
chr1 (1-98)||(37311858-37311955)
chr1 (1-106)||(1210819-1210924)
chr1 (1-106)||(8391846-8391951)
chr1 (1-106)||(8671992-8672097)
chr1 (1-106)||(49347496-49347601)
chr1 (4-106)||(4029196-4029298)
chr1 (28-106)||(32082875-32082953)
chr1 (4-106)||(34792455-34792557)
chr1 (1-106)||(9592808-9592913)
chr1 (1-106)||(30202233-30202338)
chr1 (1-106)||(32231057-32231162)
chr1 (1-106)||(22090170-22090275)
chr1 (1-106)||(25979334-25979439)
chr1 (28-106)||(15086008-15086086)
chr1 (4-106)||(51440871-51440973)
chr1 (1-106)||(51602130-51602235)
chr1 (4-96)||(43240485-43240577)
chr1 (1-73)||(4415455-4415528)
chr1 (1-106)||(38807774-38807879)
chr1 (1-96)||(39318213-39318308)
chr1 (1-65)||(52921195-52921259)
chr1 (1-92)||(52561692-52561783)
chr1 (4-86)||(9509412-9509494)
chr1 (1-91)||(9599497-9599587)
chr1 (1-106)||(478752-478857)
chr1 (1-96)||(34827207-34827302)
chr1 (1-84)||(48431509-48431592)
chr1 (40-106)||(27847947-27848013)
chr1 (1-78)||(26299187-26299264)
chr1 (1-58)||(32404629-32404686)
chr1 (39-92)||(36624013-36624066)
[»] chr2 (25 HSPs)
chr2 (1-104)||(38429960-38430063)
chr2 (4-106)||(41763148-41763250)
chr2 (1-106)||(39029655-39029760)
chr2 (1-106)||(41197330-41197436)
chr2 (1-106)||(451751-451856)
chr2 (1-106)||(3243756-3243861)
chr2 (2-106)||(36183525-36183629)
chr2 (1-106)||(12734773-12734879)
chr2 (1-106)||(2610662-2610767)
chr2 (1-106)||(7326263-7326368)
chr2 (1-106)||(11992211-11992316)
chr2 (1-106)||(28508752-28508857)
chr2 (1-106)||(38452789-38452893)
chr2 (1-106)||(18424480-18424585)
chr2 (1-106)||(45367728-45367833)
chr2 (1-105)||(8180855-8180959)
chr2 (28-106)||(23997688-23997766)
chr2 (1-106)||(3866146-3866251)
chr2 (1-106)||(4807669-4807774)
chr2 (1-105)||(25834756-25834857)
chr2 (1-106)||(24583735-24583840)
chr2 (1-63)||(35643065-35643127)
chr2 (1-96)||(6237856-6237951)
chr2 (1-76)||(31959625-31959700)
chr2 (1-60)||(45543175-45543234)
[»] chr3 (26 HSPs)
chr3 (1-106)||(35033220-35033325)
chr3 (1-106)||(22146-22251)
chr3 (4-106)||(5168906-5169008)
chr3 (1-106)||(25191451-25191556)
chr3 (1-106)||(52138874-52138979)
chr3 (28-106)||(53519666-53519744)
chr3 (1-106)||(33272126-33272231)
chr3 (1-106)||(47233699-47233804)
chr3 (1-106)||(54279094-54279199)
chr3 (1-106)||(28245511-28245616)
chr3 (1-96)||(48508319-48508414)
chr3 (6-106)||(45728222-45728324)
chr3 (9-96)||(38850204-38850291)
chr3 (1-106)||(51447820-51447918)
chr3 (32-106)||(38060505-38060579)
chr3 (1-96)||(19162690-19162785)
chr3 (1-68)||(12096808-12096875)
chr3 (1-106)||(43694874-43694973)
chr3 (15-96)||(48953538-48953619)
chr3 (1-86)||(54425068-54425153)
chr3 (1-96)||(45289194-45289289)
chr3 (2-92)||(39235226-39235316)
chr3 (32-96)||(52678982-52679046)
chr3 (42-92)||(38430936-38430986)
chr3 (39-96)||(19757984-19758040)
chr3 (1-86)||(39600784-39600869)
[»] chr4 (43 HSPs)
chr4 (1-102)||(32479116-32479217)
chr4 (1-106)||(27983267-27983372)
chr4 (1-106)||(1777120-1777225)
chr4 (1-106)||(27450282-27450387)
chr4 (1-106)||(48174196-48174301)
chr4 (1-106)||(56375364-56375469)
chr4 (1-106)||(436303-436408)
chr4 (1-106)||(4440927-4441032)
chr4 (1-106)||(31959917-31960022)
chr4 (1-106)||(52569618-52569723)
chr4 (1-106)||(39708507-39708612)
chr4 (1-104)||(48622646-48622749)
chr4 (4-106)||(46582931-46583033)
chr4 (1-86)||(21236952-21237037)
chr4 (1-106)||(33190951-33191056)
chr4 (1-106)||(43433998-43434103)
chr4 (1-106)||(53707868-53707973)
chr4 (1-104)||(26037608-26037711)
chr4 (5-100)||(39100643-39100738)
chr4 (1-96)||(50679588-50679683)
chr4 (1-106)||(20192107-20192212)
chr4 (1-106)||(33227283-33227388)
chr4 (1-106)||(23906400-23906505)
chr4 (1-106)||(47265298-47265403)
chr4 (1-106)||(50287036-50287141)
chr4 (2-106)||(37797926-37798029)
chr4 (1-52)||(21528416-21528467)
chr4 (5-100)||(37773558-37773653)
chr4 (1-106)||(8286505-8286618)
chr4 (11-106)||(20601760-20601854)
chr4 (2-105)||(41009454-41009556)
chr4 (1-97)||(20591408-20591500)
chr4 (1-99)||(45204942-45205039)
chr4 (1-106)||(28236257-28236361)
chr4 (1-52)||(6957726-6957777)
chr4 (1-52)||(7947065-7947116)
chr4 (1-52)||(12494791-12494842)
chr4 (1-96)||(28351643-28351738)
chr4 (10-69)||(51811390-51811449)
chr4 (1-59)||(50862764-50862823)
chr4 (1-92)||(51421818-51421909)
chr4 (39-93)||(31459093-31459147)
chr4 (1-78)||(35690373-35690450)
[»] chr5 (23 HSPs)
chr5 (1-91)||(13561489-13561579)
chr5 (1-106)||(3301918-3302023)
chr5 (1-106)||(38685041-38685146)
chr5 (1-106)||(1287682-1287787)
chr5 (1-106)||(4496458-4496563)
chr5 (1-86)||(14911266-14911351)
chr5 (1-106)||(16347481-16347586)
chr5 (1-106)||(20456847-20456952)
chr5 (1-106)||(24178584-24178689)
chr5 (1-106)||(12492487-12492592)
chr5 (1-106)||(2075576-2075682)
chr5 (1-106)||(2915598-2915703)
chr5 (1-104)||(28976962-28977065)
chr5 (14-106)||(14665788-14665880)
chr5 (1-104)||(1275340-1275443)
chr5 (1-106)||(10639378-10639481)
chr5 (1-75)||(34273118-34273192)
chr5 (32-96)||(26884822-26884886)
chr5 (45-100)||(36215578-36215633)
chr5 (1-49)||(29816513-29816561)
chr5 (1-72)||(27990-28061)
chr5 (1-106)||(38501521-38501626)
chr5 (36-96)||(11675594-11675654)
[»] chr6 (22 HSPs)
chr6 (1-106)||(5258251-5258356)
chr6 (1-106)||(35043544-35043649)
chr6 (1-105)||(21351940-21352044)
chr6 (3-108)||(7133818-7133923)
chr6 (3-108)||(7136741-7136846)
chr6 (1-106)||(30031330-30031435)
chr6 (1-108)||(32755993-32756100)
chr6 (1-106)||(5631896-5632001)
chr6 (1-96)||(28085460-28085555)
chr6 (1-106)||(20427740-20427844)
chr6 (1-106)||(608231-608340)
chr6 (2-106)||(12890649-12890753)
chr6 (32-106)||(10099993-10100067)
chr6 (28-104)||(14030883-14030959)
chr6 (1-102)||(9706848-9706949)
chr6 (16-106)||(5080914-5081004)
chr6 (4-106)||(28026933-28027035)
chr6 (1-57)||(34143868-34143924)
chr6 (1-57)||(34156484-34156540)
chr6 (4-96)||(33497045-33497135)
chr6 (42-106)||(30679480-30679544)
chr6 (1-106)||(9593811-9593914)
[»] scaffold0041 (1 HSPs)
scaffold0041 (1-71)||(16687-16757)
[»] scaffold0570 (1 HSPs)
scaffold0570 (1-106)||(1051-1156)
[»] scaffold0045 (1 HSPs)
scaffold0045 (1-106)||(86712-86817)
[»] scaffold0018 (1 HSPs)
scaffold0018 (1-106)||(31542-31647)
[»] scaffold0692 (1 HSPs)
scaffold0692 (2-106)||(4710-4814)
[»] scaffold0024 (1 HSPs)
scaffold0024 (1-106)||(82795-82897)
[»] scaffold0113 (1 HSPs)
scaffold0113 (2-106)||(11651-11755)
[»] scaffold0157 (1 HSPs)
scaffold0157 (1-52)||(25635-25686)
[»] scaffold0036 (1 HSPs)
scaffold0036 (45-96)||(4418-4469)


Alignment Details
Target: chr8 (Bit Score: 268; Significance: 1e-150; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 268; E-Value: 1e-150
Query Start/End: Original strand, 1 - 272
Target Start/End: Original strand, 42469830 - 42470101
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  42469830 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctactcttcttacaacg 42469929  T
Q  101 gcatcttcttacagggcattcaggttaattctatttttaagagaagttttatctacaaaagtagcatgttttatcctcgtcaaatctacctgacattgaa 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42469930 gcatcttcttacagggcattcaggttaattctatttttaagagaagttttatctacaaaagtagcatgttttatcctcgtcaaatctacctgacattgaa 42470029  T
Q  201 tctaagcttgagtaatgattatgctgttttcaactgacattgttccacaaaaagcaaagttacatgattcat 272  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42470030 tctaagcttgagtaatgattatgctgttttcaactgacattgttccacaaaaagcaaagttacatgattcat 42470101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 42854107 - 42854212
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  42854107 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctactcttcttacaacg 42854206  T
Q  101 gcatct 106  Q
    ||||||    
T  42854207 gcatct 42854212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 40813503 - 40813398
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||| |||||||||||||||| ||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||    
T  40813503 ctctaaatcctttctaatggtttctctaatagttttcttaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccacg 40813404  T
Q  101 gcatct 106  Q
    ||||||    
T  40813403 gcatct 40813398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 4 - 104
Target Start/End: Complemental strand, 8932879 - 8932779
Alignment:
Q  4 taaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacggca 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| || ||||||||||| ||||    
T  8932879 taaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacttgactctcttccatttgatttactcttcttacaatggca 8932780  T
Q  104 t 104  Q
    |    
T  8932779 t 8932779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 2796732 - 2796627
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||| |||||||||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| || ||||||||||| |    
T  2796732 ctctaaatcctttctaatggtttctctaatagttttcttaggtcttcctctacctcttttaacatgactctcctccatttgatttactcttcttacaatg 2796633  T
Q  101 gcatct 106  Q
    ||||||    
T  2796632 gcatct 2796627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 11523826 - 11523931
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||| |||||||||||||||| ||| |||||| ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||    
T  11523826 ctctaaatcctttctaatggtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccacg 11523925  T
Q  101 gcatct 106  Q
    ||||||    
T  11523926 gcatct 11523931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 36565344 - 36565449
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||| |||||||||||||||| ||| |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||  |||||||| |||    
T  36565344 ctctaaatcctttctaatggtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatttgatctacccttcttaccacg 36565443  T
Q  101 gcatct 106  Q
    ||||||    
T  36565444 gcatct 36565449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 26905009 - 26905112
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    |||||||||||||||||||||||||| ||| |||||| ||||||| |||||||||||||| | ||||||||| ||||||||||||| |||||||||||||    
T  26905009 ctctaaatcttttctaatggtttctctaatagttttcctaggtctccctctacctctttttatctgactctcttccatttgatctactcttcttacaacg 26905108  T
Q  101 gcat 104  Q
    ||||    
T  26905109 gcat 26905112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 12491241 - 12491346
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||| |||||||||||||||| ||| |||||| ||||||||| ||||||||||||||| |||||||||| ||||||||||| ||||||||| |||    
T  12491241 ctctaaatcctttctaatggtttctctaatagttttcataggtcttcatctacctcttttaacttgactctccttcatttgatctactcttcttaccacg 12491340  T
Q  101 gcatct 106  Q
    ||||||    
T  12491341 gcatct 12491346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 36545328 - 36545223
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||| |||||||||||||||| ||| |||||| ||||||||||||||| ||||||||| ||||| |||||||||||||||| ||||||||| |||    
T  36545328 ctctaaatcctttctaatggtttctctaatagttttcctaggtcttcctctacgtcttttaacttgactatcctccatttgatctactcttcttaccacg 36545229  T
Q  101 gcatct 106  Q
    ||||||    
T  36545228 gcatct 36545223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 2 - 106
Target Start/End: Complemental strand, 21121324 - 21121220
Alignment:
Q  2 tctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacgg 101  Q
    |||||||| |||||||||||||||| ||| | |||||||||||| ||||||||||||||||||| |||||| ||||||||||||| ||||||||| ||||    
T  21121324 tctaaatcctttctaatggtttctctaatagatttcttaggtctccctctacctcttttaacctaactctcgtccatttgatctactcttcttacgacgg 21121225  T
Q  102 catct 106  Q
    |||||    
T  21121224 catct 21121220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 170 - 272
Target Start/End: Original strand, 42477233 - 42477336
Alignment:
Q  170 tttatcctcgtcaaatctacctgacattgaatctaagcttgagtaatgattatgctgttttcaactgacattgttcc-acaaaaagcaaagttacatgat 268  Q
    |||||||||| || |||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| | || |||||| |||||||||||||||    
T  42477233 tttatcctcgccagatctacctgacattgaatctaagcttgagtaacgattattctgttttcaactgacattttgcctacaaaaggcaaagttacatgat 42477332  T
Q  269 tcat 272  Q
    ||||    
T  42477333 tcat 42477336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 36395052 - 36395157
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||| ||||||| |||||||| ||| |||||| ||||||||||| ||||||||||||| ||||| |||||||||||||||| ||||||||| |||    
T  36395052 ctctaaatcctttctaacggtttctcaaatagttttcctaggtcttcctatacctcttttaacttgactttcctccatttgatctactcttcttaccacg 36395151  T
Q  101 gcatct 106  Q
    ||||||    
T  36395152 gcatct 36395157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 39947036 - 39946931
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    |||||||||||||||||||||||||| ||| |||||  |||||| ||||||||||||| |||| ||| |||||||||||||||||| ||||||||| |||    
T  39947036 ctctaaatcttttctaatggtttctctaatagtttttctaggtcgtcctctacctcttctaacttgagtctcctccatttgatctactcttcttacgacg 39946937  T
Q  101 gcatct 106  Q
    ||||||    
T  39946936 gcatct 39946931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 2027709 - 2027631
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatt 79  Q
    ||||||||| |||||||||||||||| ||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  2027709 ctctaaatcatttctaatggtttctctaatagttttcctaggtcttcctctacctcttttaacctgactctcctccatt 2027631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 28 - 106
Target Start/End: Complemental strand, 12025941 - 12025863
Alignment:
Q  28 aatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacggcatct 106  Q
    |||||||||||||||||||| | ||||||||||||||||||||| ||| |||||||||| |||||||||||||||||||    
T  12025941 aatggttttcttaggtcttcatttacctcttttaacctgactcttctctatttgatctactcttcttacaacggcatct 12025863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 4 - 106
Target Start/End: Complemental strand, 18125348 - 18125247
Alignment:
Q  4 taaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacggca 103  Q
    ||||||||||||||||||||||| ||| |||||  ||||||| |||||||||| ||||||| ||||||||||||||||||||| | ||||||| ||||||    
T  18125348 taaatcttttctaatggtttctctaatagtttttctaggtctccctctacctc-tttaacccgactctcctccatttgatctactattcttacgacggca 18125250  T
Q  104 tct 106  Q
    |||    
T  18125249 tct 18125247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 37077930 - 37077825
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||| ||||||||||||||||  ||  ||||| ||||||||| ||||||| |||| ||| ||||||||||||||||||||| ||||||||| |||    
T  37077930 ctctaaatcctttctaatggtttctcttataattttcctaggtcttcatctacctattttgacccgactctcctccatttgatctactcttcttacgacg 37077831  T
Q  101 gcatct 106  Q
    ||||||    
T  37077830 gcatct 37077825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 14742183 - 14742234
Alignment:
Q  2 tctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctac 53  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14742183 tctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctac 14742234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 106
Target Start/End: Original strand, 18751996 - 18752084
Alignment:
Q  18 tggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacggcatct 106  Q
    ||||||| | ||||||||| |||||| |||||||||||||||||| || ||| |  ||||||||||| | |||| | ||||||||||||    
T  18751996 tggtttcgctaatggtttttttaggtattcctctacctcttttaatctaactattttccatttgatccactcttttaacaacggcatct 18752084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 92
Target Start/End: Complemental strand, 45419411 - 45419323
Alignment:
Q  4 taaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttc 92  Q
    |||| |||| ||||| |||||||  || |||||  ||||||||||||||||||||   | ||||||||||||||| ||||||| |||||    
T  45419411 taaacctttcctaatagtttctcttatagtttttctaggtcttcctctacctcttcagatctgactctcctccatctgatctactcttc 45419323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 103
Target Start/End: Original strand, 8879548 - 8879649
Alignment:
Q  2 tctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacgg 101  Q
    |||||||| ||| ||||||||||||  || |||||| || |||| |||| | ||||||  ||| ||| ||||||||| ||||| | ||||||||| ||||    
T  8879548 tctaaatcatttttaatggtttctcttatagttttcctacgtctccctcaagctctttggacccgaccctcctccatctgatcaactcttcttacgacgg 8879647  T
Q  102 ca 103  Q
    ||    
T  8879648 ca 8879649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 28169567 - 28169514
Alignment:
Q  5 aaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctctt 58  Q
    |||||||| ||||| |||||||  || ||||| |||||||||||||||||||||    
T  28169567 aaatctttcctaatagtttctcttatagtttttttaggtcttcctctacctctt 28169514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 96
Target Start/End: Original strand, 43904806 - 43904863
Alignment:
Q  39 taggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttac 96  Q
    ||||||||||| |||||||| |||  ||||| |||||||| ||||||| |||||||||    
T  43904806 taggtcttcctgtacctcttgtaatttgactatcctccatctgatctattcttcttac 43904863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 102; Significance: 1e-50; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 43281853 - 43281748
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  43281853 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctactcttcttacaacg 43281754  T
Q  101 gcatct 106  Q
    ||||||    
T  43281753 gcatct 43281748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 29650563 - 29650458
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||    
T  29650563 ctctaaatcttttctaatggtttctcgaatggttttcttaggttttcctttacctcttttaacctgactctcctccatttgatctactcttcttacaacg 29650464  T
Q  101 gcatct 106  Q
    ||||||    
T  29650463 gcatct 29650458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 24598290 - 24598395
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| ||||||||||| |||||||||||||    
T  24598290 ctctaaatcttttctaatggtttctcgaatgattttcttaggtcttcctctacctcttttaacctgactcaccttcatttgatctactcttcttacaacg 24598389  T
Q  101 gcatct 106  Q
    ||||||    
T  24598390 gcatct 24598395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 12841378 - 12841483
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||| |||||||||||||||| ||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||    
T  12841378 ctctaaatcctttctaatggtttctctaatagttttcttaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccacg 12841477  T
Q  101 gcatct 106  Q
    ||||||    
T  12841478 gcatct 12841483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 33349909 - 33350014
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||| |||||||||||||||| ||| |||||| ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||    
T  33349909 ctctaaatcatttctaatggtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccacg 33350008  T
Q  101 gcatct 106  Q
    ||||||    
T  33350009 gcatct 33350014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 35559096 - 35559201
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    |||||||||||||||||||||||||| ||| |||||| ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||    
T  35559096 ctctaaatcttttctaatggtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccacg 35559195  T
Q  101 gcatct 106  Q
     |||||    
T  35559196 acatct 35559201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 37618124 - 37618019
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||| |||||||||||||||| ||| |||||| ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||    
T  37618124 ctctaaatcctttctaatggtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccacg 37618025  T
Q  101 gcatct 106  Q
    ||||||    
T  37618024 gcatct 37618019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 11594139 - 11594034
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||| |||||||||||||||| ||| |||||| ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| | |    
T  11594139 ctctaaatcctttctaatggtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccatg 11594040  T
Q  101 gcatct 106  Q
    ||||||    
T  11594039 gcatct 11594034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 44855275 - 44855380
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    |||||||||||||||||||||||||| ||| |||||| ||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||  |||    
T  44855275 ctctaaatcttttctaatggtttctctaatagttttcctaggtcttcctctacttcttttaacttgactctcctccatttgatctactcttcttatgacg 44855374  T
Q  101 gcatct 106  Q
    ||||||    
T  44855375 gcatct 44855380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 49029455 - 49029350
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||| |||||||||||||||| ||| |||||| ||||||||||||||||||||||||| |||||||||||||||||||||| || |||||| |||    
T  49029455 ctctaaatcctttctaatggtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatttgatctattcgtcttaccacg 49029356  T
Q  101 gcatct 106  Q
    ||||||    
T  49029355 gcatct 49029350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 13859111 - 13859216
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||| |||||||||||||||| ||| |||||| |||||||||||||||||||| |||| |||||||||||||||||||||| ||||||||| ||     
T  13859111 ctctaaatcctttctaatggtttctctaatagttttcctaggtcttcctctacctcttctaacttgactctcctccatttgatctactcttcttacgaca 13859210  T
Q  101 gcatct 106  Q
    ||||||    
T  13859211 gcatct 13859216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 31005402 - 31005297
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    |||| |||| |||| ||||||||||| ||| |||||| ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||    
T  31005402 ctctgaatcctttcaaatggtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccacg 31005303  T
Q  101 gcatct 106  Q
    ||||||    
T  31005302 gcatct 31005297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 31682705 - 31682810
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||| |||||||||||||||| ||| |||||| |||||||||||||||||||| |||| |||||||||||||||||||||| ||||||||  |||    
T  31682705 ctctaaatcctttctaatggtttctctaatagttttcctaggtcttcctctacctcttctaacttgactctcctccatttgatctactcttcttatgacg 31682804  T
Q  101 gcatct 106  Q
    ||||||    
T  31682805 gcatct 31682810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 36652171 - 36652066
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    |||| |||| |||||||||||||||| ||| |||||||||||||||||||||||||||||||| ||||| ||||| |||||||||| ||||||||| |||    
T  36652171 ctctgaatcctttctaatggtttctctaatagttttcttaggtcttcctctacctcttttaacttgactatcctctatttgatctactcttcttaccacg 36652072  T
Q  101 gcatct 106  Q
    ||||||    
T  36652071 gcatct 36652066  T

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Target: chr7; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 34869599 - 34869496
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||| |||||||||||||||| ||| |||||| ||||||||||||||||||||||||| ||||||||| ||||| |||||| ||||||||| |||    
T  34869599 ctctaaatcctttctaatggtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctccaccattggatctactcttcttaccacg 34869500  T
Q  101 gcat 104  Q
    ||||    
T  34869499 gcat 34869496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 5 - 106
Target Start/End: Original strand, 35906308 - 35906409
Alignment:
Q  5 aaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacggcat 104  Q
    ||||| |||||||||||||||| ||| |||||| ||||||||||||||||||||||||| |||||||||||||| |||| || ||||||||| |||||||    
T  35906308 aaatcctttctaatggtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatatgatatactcttcttaccacggcat 35906407  T
Q  105 ct 106  Q
    ||    
T  35906408 ct 35906409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 3 - 106
Target Start/End: Original strand, 2885827 - 2885930
Alignment:
Q  3 ctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacggc 102  Q
    ||||||| ||||||||||||||||  || |||||| ||||||||| |||||||||||| ||||||||||||||||| ||||||| ||||| |||||||||    
T  2885827 ctaaatcatttctaatggtttctcttatagttttcctaggtcttcttctacctcttttgacctgactctcctccatctgatctactcttcgtacaacggc 2885926  T
Q  103 atct 106  Q
    ||||    
T  2885927 atct 2885930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 28 - 106
Target Start/End: Complemental strand, 32631728 - 32631650
Alignment:
Q  28 aatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacggcatct 106  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | |||||| ||||||||||||    
T  32631728 aatggttttcttaggtcttcctctacctcttttaacctgactatcctccatttgatccactcttctaacaacggcatct 32631650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 39906475 - 39906578
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||| |||||||||||||||| ||| |||||| ||||||||||||||||||||||||| |||  ||||||||||||||||| ||||||||| |||    
T  39906475 ctctaaatcctttctaatggtttctctaatagttttcctaggtcttcctctacctcttttaacttga--ctcctccatttgatctactcttcttaccacg 39906572  T
Q  101 gcatct 106  Q
     |||||    
T  39906573 acatct 39906578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 4 - 96
Target Start/End: Complemental strand, 22349796 - 22349704
Alignment:
Q  4 taaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttac 96  Q
    |||||| ||| |||||||||||| ||| |||||| ||| ||||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  22349796 taaatcctttttaatggtttctctaatagttttcctagttcttcctctacctcttttaacttgactctcctccatttgatctactcttcttac 22349704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 4 - 96
Target Start/End: Original strand, 46355962 - 46356054
Alignment:
Q  4 taaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttac 96  Q
    |||||| |||||||||||||||  ||| |||||| ||||| ||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  46355962 taaatcctttctaatggtttctttaatagttttcctaggttttcctctacctcttttaacttgactctcctccatttgatctactcttcttac 46356054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 28 - 106
Target Start/End: Complemental strand, 38607156 - 38607078
Alignment:
Q  28 aatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacggcatct 106  Q
    |||||||||||||||||||||||| |||||| |||| |||||||||||||||||||||| |||||| ||||||||||||    
T  38607156 aatggttttcttaggtcttcctctccctcttctaacgtgactctcctccatttgatctactcttctaacaacggcatct 38607078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 45836585 - 45836688
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||| |||||||||||||||| ||| ||| || ||||||| |||||||||| |  ||||| |||||||||||||||||||| |||||||||||||    
T  45836585 ctctaaatcctttctaatggtttctctaatagttgtcctaggtctccctctacctcat--aacctaactctcctccatttgatctactcttcttacaacg 45836682  T
Q  101 gcatct 106  Q
    ||||||    
T  45836683 gcatct 45836688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 43491487 - 43491382
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||  ||||||||||||||||  ||  ||||| |||||||||||||||||||||| ||||||||||||||||| ||||| | ||||||||| |||    
T  43491487 ctctaaattctttctaatggtttctcttataattttcctaggtcttcctctacctcttttgacctgactctcctccatctgatcaactcttcttacgacg 43491388  T
Q  101 gcatct 106  Q
    ||||||    
T  43491387 gcatct 43491382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 6375047 - 6374942
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||  |||||||||||||||| ||| |||||| ||| ||||||||||||||||||||| ||| |||||| |||||||||||  |||||||| ||     
T  6375047 ctctaaattctttctaatggtttctctaatagttttcctagatcttcctctacctcttttaacttgattctcctacatttgatctacccttcttaccaca 6374948  T
Q  101 gcatct 106  Q
    ||||||    
T  6374947 gcatct 6374942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 94
Target Start/End: Original strand, 36869348 - 36869440
Alignment:
Q  2 tctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttctt 94  Q
    |||||||| |||||||||||||||  ||| ||||||  |||||||||||||||| || |||| |||||||||||||||||||||| |||||||    
T  36869348 tctaaatcctttctaatggtttctttaatagttttcccaggtcttcctctacctattctaacttgactctcctccatttgatctactcttctt 36869440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 32 - 106
Target Start/End: Complemental strand, 33073100 - 33073026
Alignment:
Q  32 gttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacggcatct 106  Q
    |||||| ||||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||| ||| |||||    
T  33073100 gttttcctaggtcttcctctacctcttttaacttgactcttctccatttgatctactcttcttaccacgacatct 33073026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 7273279 - 7273202
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccat 78  Q
    |||| ||| |||||||||||||||||  || |||||| |||||||||||||||||||||| |||||||||||||||||    
T  7273279 ctctgaatattttctaatggtttctcttatagttttcataggtcttcctctacctcttttgacctgactctcctccat 7273202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 4 - 106
Target Start/End: Original strand, 31681126 - 31681225
Alignment:
Q  4 taaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacggca 103  Q
    |||||| |||||||||||||||| |||   |||| ||||||| ||||||||| |||||| ||||||||| ||||||||||| | ||||||||| ||||||    
T  31681126 taaatcctttctaatggtttctctaat---tttcctaggtctccctctacctgttttaaactgactctcttccatttgatcaactcttcttacgacggca 31681222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 33 - 95
Target Start/End: Complemental strand, 23404564 - 23404502
Alignment:
Q  33 ttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttctta 95  Q
    ||||| ||||||||| |||||||||||| ||||||||||||||||||||||||| ||||||||    
T  23404564 ttttcctaggtcttcttctacctcttttgacctgactctcctccatttgatctactcttctta 23404502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 38900136 - 38900074
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaac 63  Q
    ||||||||| |||||||||||||||| ||| |||||| |||||||||||||||||||||||||    
T  38900136 ctctaaatcctttctaatggtttctctaatagttttcctaggtcttcctctacctcttttaac 38900074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 40980031 - 40980093
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaac 63  Q
    |||||||||||||||||| |||||||  || |||||| |||||||||||||||||||||||||    
T  40980031 ctctaaatcttttctaatagtttctcttatagttttcctaggtcttcctctacctcttttaac 40980093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 28628036 - 28628131
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttac 96  Q
    |||||||||||| ||||| |||||||  || |||||  |||||||||||||||||||| | |  ||||| ||||||||  |||||| ||| |||||    
T  28628036 ctctaaatctttcctaatagtttctcttatagtttttctaggtcttcctctacctcttgtgatttgactatcctccatcggatctactctccttac 28628131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 85
Target Start/End: Complemental strand, 36136942 - 36136859
Alignment:
Q  2 tctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatct 85  Q
    ||||||||||| | ||| |||||||  || |||||  ||||||||||||||| |||| | | ||||||||||||||| ||||||    
T  36136942 tctaaatctttccaaatagtttctcttatagtttttctaggtcttcctctacttcttctgatctgactctcctccatctgatct 36136859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 92
Target Start/End: Complemental strand, 1011188 - 1011135
Alignment:
Q  39 taggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttc 92  Q
    |||||||||||||||||||||| | |||||||||||  || ||||||| |||||    
T  1011188 taggtcttcctctacctcttttgatctgactctcctttatctgatctactcttc 1011135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 92
Target Start/End: Original strand, 7189361 - 7189414
Alignment:
Q  39 taggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttc 92  Q
    ||||||||||||||| |||| |||  |||||||||||||| ||||||| |||||    
T  7189361 taggtcttcctctacatcttctaatatgactctcctccatctgatctactcttc 7189414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 98; Significance: 3e-48; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 696448 - 696343
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  696448 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatatgatctactcttcttacaacg 696349  T
Q  101 gcatct 106  Q
    ||||||    
T  696348 gcatct 696343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 4001558 - 4001663
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  4001558 ctctaaatcttttttaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctactcttcttacaacg 4001657  T
Q  101 gcatct 106  Q
    ||||||    
T  4001658 gcatct 4001663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 37311858 - 37311955
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaa 98  Q
    |||||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  37311858 ctctaaatcttttctaatggtttctcaaatggttttcctaggtctacctctacctcttttaacctgactctcctccatttgatctactcttcttacaa 37311955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 1210924 - 1210819
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||| |||||||||||||||| ||| |||||| ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||    
T  1210924 ctctaaatcctttctaatggtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccacg 1210825  T
Q  101 gcatct 106  Q
    ||||||    
T  1210824 gcatct 1210819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 8391951 - 8391846
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| | |||||| |||||| |||||||||| ||||||||||| |||||||||||||    
T  8391951 ctctaaatcttttctaatgatttctcgaatggttttcttaggtcttcatatacctcctttaacatgactctccttcatttgatctactcttcttacaacg 8391852  T
Q  101 gcatct 106  Q
    ||||||    
T  8391851 gcatct 8391846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 8672097 - 8671992
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||| |||||||||||||||| ||| |||||| ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||    
T  8672097 ctctaaatcctttctaatggtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccacg 8671998  T
Q  101 gcatct 106  Q
    ||||||    
T  8671997 gcatct 8671992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 49347496 - 49347601
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||| |||||||||||||||| ||| |||||| ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||    
T  49347496 ctctaaatcctttctaatggtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccacg 49347595  T
Q  101 gcatct 106  Q
    ||||||    
T  49347596 gcatct 49347601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 4 - 106
Target Start/End: Complemental strand, 4029298 - 4029196
Alignment:
Q  4 taaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacggca 103  Q
    |||||| |||||||||||||||| ||| |||||| ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| ||||||    
T  4029298 taaatcctttctaatggtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatttgatctattcttcttaccacggca 4029199  T
Q  104 tct 106  Q
    |||    
T  4029198 tct 4029196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 28 - 106
Target Start/End: Original strand, 32082875 - 32082953
Alignment:
Q  28 aatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacggcatct 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  32082875 aatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctactcttcttacaacggcatct 32082953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 4 - 106
Target Start/End: Original strand, 34792455 - 34792557
Alignment:
Q  4 taaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacggca 103  Q
    |||||| |||||||||||||||| ||| |||||| ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| ||||||    
T  34792455 taaatcctttctaatggtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccacggca 34792554  T
Q  104 tct 106  Q
    |||    
T  34792555 tct 34792557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 9592913 - 9592808
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||| |||||||||||||||| ||| | |||| ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||    
T  9592913 ctctaaatcatttctaatggtttctctaataggtttcctaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccacg 9592814  T
Q  101 gcatct 106  Q
    ||||||    
T  9592813 gcatct 9592808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 30202233 - 30202338
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||| |||||||||||||||| ||| |||||| ||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||||| |||    
T  30202233 ctctaaatcctttctaatggtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcgtccatttgatctactcttcttaccacg 30202332  T
Q  101 gcatct 106  Q
    ||||||    
T  30202333 gcatct 30202338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 32231057 - 32231162
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||| |||||||||||||||| ||| |||||| ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||  |||    
T  32231057 ctctaaatcctttctaatggtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttatgacg 32231156  T
Q  101 gcatct 106  Q
    ||||||    
T  32231157 gcatct 32231162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 22090275 - 22090170
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||| |||||||||||||||| ||| |||||| |||||||||||||||| |||||||| |||||||||||||||||||||| | ||||||| |||    
T  22090275 ctctaaatcctttctaatggtttctctaatagttttcctaggtcttcctctaccccttttaacttgactctcctccatttgatctacttttcttaccacg 22090176  T
Q  101 gcatct 106  Q
    ||||||    
T  22090175 gcatct 22090170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 25979334 - 25979439
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||| |||||||||||||||| ||| |||||| | ||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||||     
T  25979334 ctctaaatcctttctaatggtttctctaatagttttcatgggtcttcctctacctcttttaacctgactctcctccattcgatctactctccttacaaca 25979433  T
Q  101 gcatct 106  Q
    ||||||    
T  25979434 gcatct 25979439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 28 - 106
Target Start/End: Complemental strand, 15086086 - 15086008
Alignment:
Q  28 aatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacggcatct 106  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| ||||||||||||    
T  15086086 aatggttttcttaggtcttcctctacctcttttaatctgactctcctccatttgatctactcttctaacaacggcatct 15086008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 4 - 106
Target Start/End: Original strand, 51440871 - 51440973
Alignment:
Q  4 taaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacggca 103  Q
    |||||| |||||||||||||||| ||| |||||| |||||||||||||||||| |||||| ||||||||||||||||| |||| ||||||||| ||||||    
T  51440871 taaatcctttctaatggtttctctaatagttttcctaggtcttcctctacctcctttaacttgactctcctccatttgctctactcttcttaccacggca 51440970  T
Q  104 tct 106  Q
    |||    
T  51440971 tct 51440973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 51602235 - 51602130
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    |||||||||  |||||||||||| || ||| |||||| ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||    
T  51602235 ctctaaatcccttctaatggtttttctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccacg 51602136  T
Q  101 gcatct 106  Q
     |||||    
T  51602135 acatct 51602130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 4 - 96
Target Start/End: Original strand, 43240485 - 43240577
Alignment:
Q  4 taaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttac 96  Q
    |||||| |||||||||||||||| ||| |||||| ||||||||||||||||| ||||||| | |||||||||||||||||||| |||||||||    
T  43240485 taaatcatttctaatggtttctctaatagttttcctaggtcttcctctaccttttttaacttaactctcctccatttgatctactcttcttac 43240577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 4415528 - 4415455
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacc-tcttttaacctgactctcc 73  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||| | |||||||||||||||||    
T  4415528 ctctaaatcttttctaatggtttctcgaatggttttcttaggttttcctctacctttttttaacctgactctcc 4415455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 38807774 - 38807879
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||| ||||||||||||||||  || ||||||||||||||||| ||| ||||||| | ||||||||||||||| || |||| ||||||||| |||    
T  38807774 ctctaaatcctttctaatggtttctcttatagttttcttaggtcttcccctagctcttttgatctgactctcctccatctggtctactcttcttacgacg 38807873  T
Q  101 gcatct 106  Q
    ||||||    
T  38807874 gcatct 38807879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 39318308 - 39318213
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttac 96  Q
    ||||||||| ||||||||||||||||  || |||||| |||||||||||||||||||||| ||| ||||||||||||| ||||||  |||||||||    
T  39318308 ctctaaatcctttctaatggtttctcttatagttttcctaggtcttcctctacctcttttgacccgactctcctccatctgatctgctcttcttac 39318213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 52921259 - 52921195
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacct 65  Q
    ||||||||| |||||||||||||||| ||| |||||| |||||||||||||||||||||||||||    
T  52921259 ctctaaatcctttctaatggtttctctaatagttttcctaggtcttcctctacctcttttaacct 52921195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 52561692 - 52561783
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttc 92  Q
    |||||||||||| ||||  |||||||  || |||||  || ||||||||||||||||| ||| || |||||||||||| ||||||| |||||    
T  52561692 ctctaaatctttcctaacagtttctcttatagtttttctaagtcttcctctacctcttctaatctaactctcctccatctgatctactcttc 52561783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 86
Target Start/End: Complemental strand, 9509494 - 9509412
Alignment:
Q  4 taaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatcta 86  Q
    ||||||||| ||||| |||| ||  || |||||  |||||||||||||||||||| |||  |||||||||||||| |||||||    
T  9509494 taaatctttcctaatagtttatcttatagtttttctaggtcttcctctacctcttctaatatgactctcctccatctgatcta 9509412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 9599497 - 9599587
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatctt 91  Q
    |||||||| ||| ||||| |||||||   | |||||  |||||||||||||||||||| | | ||||||||||||||| ||||||| ||||    
T  9599497 ctctaaatatttcctaatagtttctcttgtagtttttctaggtcttcctctacctcttatgatctgactctcctccatctgatctactctt 9599587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 478857 - 478752
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||| |||| ||||| |||||||  || | |||  |||||||||||||| ||||||| |||| |||||| | ||| ||||||| ||||||||| ||     
T  478857 ctctaaaactttcctaatagtttctcttatagattttgtaggtcttcctctaactcttttgacctaactctctttcatctgatctactcttcttacgaca 478758  T
Q  101 gcatct 106  Q
    ||||||    
T  478757 gcatct 478752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 34827207 - 34827302
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttac 96  Q
    |||||||||||||||||| |||||||  || |||||  ||||||||||| ||  | || |||||| |||||||||||| | ||||| | |||||||    
T  34827207 ctctaaatcttttctaatagtttctcttatagtttttctaggtcttcctttattttttctaaccttactctcctccatctaatctacttttcttac 34827302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 48431509 - 48431592
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatc 84  Q
    ||||||||||||  |||| |||||||  || ||||| || |||||||||||||||||| ||| | |||| |||||||| |||||    
T  48431509 ctctaaatctttcttaatagtttctcttatagtttttttgggtcttcctctacctcttgtaatccgactatcctccatctgatc 48431592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 106
Target Start/End: Original strand, 27847947 - 27848013
Alignment:
Q  40 aggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacggcatct 106  Q
    ||||||||||||||||||| | | ||||||||||||||| |||| || ||||| ||| || ||||||    
T  27847947 aggtcttcctctacctcttctgagctgactctcctccatctgatatactcttcatactacagcatct 27848013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 26299264 - 26299187
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccat 78  Q
    ||||||||||||  |||| |||||||  || |||||| ||||| |||||||||||||  ||| |||||| ||||||||    
T  26299264 ctctaaatctttcataatagtttctcttatagttttcctaggttttcctctacctctggtaatctgactatcctccat 26299187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 32404629 - 32404686
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctctt 58  Q
    |||||||||||| ||||| |||||||  || |||||  ||||||||||||||||||||    
T  32404629 ctctaaatctttcctaatagtttctcttatagtttttgtaggtcttcctctacctctt 32404686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 92
Target Start/End: Original strand, 36624013 - 36624066
Alignment:
Q  39 taggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttc 92  Q
    |||||||||||||||||||| | | | ||||||||||||| ||||||| |||||    
T  36624013 taggtcttcctctacctcttctgatccgactctcctccatctgatctactcttc 36624066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 96; Significance: 4e-47; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 38430063 - 38429960
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||    
T  38430063 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacttcttttaacctgactctcctccatttgatctactcttcttacaacg 38429964  T
Q  101 gcat 104  Q
    ||||    
T  38429963 gcat 38429960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 4 - 106
Target Start/End: Original strand, 41763148 - 41763250
Alignment:
Q  4 taaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacggca 103  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | ||||||||||||||    
T  41763148 taaattttttctaatggtttctcgaatggttttcttaggtcttcctctaccttttttaacctgactctcctccatttgatctacttttcttacaacggca 41763247  T
Q  104 tct 106  Q
    |||    
T  41763248 tct 41763250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 39029760 - 39029655
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| ||||||| |||||||| |||||||||||||    
T  39029760 ctctaaatcttttctaatggtttctcgaatgtttttcttaggtcttcctctacctctttttacctgactttcctccaattgatctactcttcttacaacg 39029661  T
Q  101 gcatct 106  Q
    ||||||    
T  39029660 gcatct 39029655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 41197330 - 41197436
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctctttt-aacctgactctcctccatttgatctaatcttcttacaac 99  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||| |||||||| |||| |||||||||||||||||||||||||| ||||||||||||    
T  41197330 ctctaaatcttttataatggtttctcaaatggttttcttaggtctttctctacctttttttaacctgactctcctccatttgatctactcttcttacaac 41197429  T
Q  100 ggcatct 106  Q
    |||||||    
T  41197430 ggcatct 41197436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 451751 - 451856
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||| |||||||||||||||| ||| |||||| ||||||||||||||||| ||||||| |||||||||||||||||||||| ||||||||| |||    
T  451751 ctctaaatcctttctaatggtttctctaatagttttcctaggtcttcctctaccttttttaacttgactctcctccatttgatctactcttcttaccacg 451850  T
Q  101 gcatct 106  Q
    ||||||    
T  451851 gcatct 451856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 3243756 - 3243861
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||| |||||||||||||||| ||| |||||| ||||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||| |||    
T  3243756 ctctaaatcctttctaatggtttctctaatagttttcctaggtcttcctctgcctcttttaacttgactctcctccatttgatctattcttcttaccacg 3243855  T
Q  101 gcatct 106  Q
    ||||||    
T  3243856 gcatct 3243861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 2 - 106
Target Start/End: Complemental strand, 36183629 - 36183525
Alignment:
Q  2 tctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacgg 101  Q
    |||||||| |||||||||||||||| ||| |||||| ||||||||||||||||||||||||| |||||||||||||||| ||||| ||||||||| ||||    
T  36183629 tctaaatcctttctaatggtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccattttatctactcttcttaccacgg 36183530  T
Q  102 catct 106  Q
    |||||    
T  36183529 catct 36183525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 12734879 - 12734773
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacc-tcttttaacctgactctcctccatttgatctaatcttcttacaac 99  Q
    ||||||||| |||||||||||||||| ||| |||||| ||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||| ||    
T  12734879 ctctaaatcctttctaatggtttctctaatagttttcctaggtctccctctaccctcttttaacctgactctcctccatttgatctactcttcttaccac 12734780  T
Q  100 ggcatct 106  Q
    |||||||    
T  12734779 ggcatct 12734773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 2610767 - 2610662
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||| |||||||||||||||| ||| |||||| ||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||||| |||    
T  2610767 ctctaaatcctttctaatggtttctctaatagttttcataggtcttcctctacctcttttaacttgactctcatccatttgatctactcttcttaccacg 2610668  T
Q  101 gcatct 106  Q
     |||||    
T  2610667 acatct 2610662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 7326263 - 7326368
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||| |||||||||||||||| ||| |||||| || |||||||||||||||||||||| |||||||||| ||||||||||| ||||||||| |||    
T  7326263 ctctaaatcatttctaatggtttctctaatagttttcctatgtcttcctctacctcttttaacttgactctccttcatttgatctactcttcttaccacg 7326362  T
Q  101 gcatct 106  Q
    ||||||    
T  7326363 gcatct 7326368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 11992211 - 11992316
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||| ||||||||| |||| | |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| | |||||| ||||||    
T  11992211 ctctaaatcctttctaatgatttccctaatggttttcttaggtcttcctttacctcttttaacccgactctcctccatttgatccactcttctaacaacg 11992310  T
Q  101 gcatct 106  Q
    ||||||    
T  11992311 gcatct 11992316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 28508857 - 28508752
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||| |||||||||||||||| ||| |||||| ||||||||||||||| ||||||||| |||||||||||||||||||||| |||| |||| |||    
T  28508857 ctctaaatcctttctaatggtttctctaatagttttcctaggtcttcctctacatcttttaacttgactctcctccatttgatctactcttattaccacg 28508758  T
Q  101 gcatct 106  Q
    ||||||    
T  28508757 gcatct 28508752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 38452789 - 38452893
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||| |||||||||||||||| ||| |||||| ||||||||||||||||||||||||| ||||| ||||||||||||||| |||||||||| |||    
T  38452789 ctctaaatcctttctaatggtttctctaatagttttcctaggtcttcctctacctcttttaacttgactttcctccatttgatct-atcttcttaccacg 38452887  T
Q  101 gcatct 106  Q
    ||||||    
T  38452888 gcatct 38452893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 18424480 - 18424585
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||| ||| |||||||||||| ||| |||||| || ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||  ||    
T  18424480 ctctaaatcctttataatggtttctctaatagttttcctatgtcttcctctacctcttttaacctgactctcatccaattgatctaatcttcttacgtcg 18424579  T
Q  101 gcatct 106  Q
    ||||||    
T  18424580 gcatct 18424585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 45367728 - 45367833
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||| ||||||||| |||||| ||||||||||||  ||||||||||||||||||||||  |||||||||||||||||||||  ||||| ||||||    
T  45367728 ctctaaatcctttctaatgatttctctaatggttttcttgagtcttcctctacctcttttaactagactctcctccatttgatctacccttctaacaacg 45367827  T
Q  101 gcatct 106  Q
    ||||||    
T  45367828 gcatct 45367833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 8180959 - 8180855
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||| ||||||||||||| || ||| |||||| || ||||||||||||| |||||||| |||||||||||||||||||||| ||||||||| |||    
T  8180959 ctctaaatcctttctaatggtttatctaatagttttcctatgtcttcctctaccgcttttaacttgactctcctccatttgatctactcttcttaccacg 8180860  T
Q  101 gcatc 105  Q
    |||||    
T  8180859 gcatc 8180855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 28 - 106
Target Start/End: Complemental strand, 23997766 - 23997688
Alignment:
Q  28 aatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacggcatct 106  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  23997766 aatggttttcttaggtcttcttccacctcttttaacctgactctcctccatttgatctactcttcttacaacgacatct 23997688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 3866251 - 3866146
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||| |||||||||||||||| ||| |||||| ||||| ||||||||||||||||||  || ||||||||||||||||||| ||||||||| |||    
T  3866251 ctctaaatcctttctaatggtttctctaatagttttcctaggttttcctctacctcttttaatttgtctctcctccatttgatctactcttcttaccacg 3866152  T
Q  101 gcatct 106  Q
     |||||    
T  3866151 acatct 3866146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 4807774 - 4807669
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||  |||||||||||||||| ||| |||||| ||||||||| ||||||||||||||| |||||||||| ||||||||||| ||||||||| |||    
T  4807774 ctctaaatactttctaatggtttctctaatagttttcctaggtcttcatctacctcttttaacttgactctccttcatttgatctactcttcttaccacg 4807675  T
Q  101 gcatct 106  Q
     |||||    
T  4807674 acatct 4807669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 25834857 - 25834756
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||| |||||||||||||||  || | ||||| ||||||||||||||||||||||||||| ||||  |||||||||||||| |||||||||||||    
T  25834857 ctctaaatcctttctaatggtttctttaaag-ttttcctaggtcttcctctacctcttttaacctaactc--ctccatttgatctactcttcttacaacg 25834761  T
Q  101 gcatc 105  Q
    |||||    
T  25834760 gcatc 25834756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 24583735 - 24583840
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||| |||||||||||||||| | | ||||| ||  |||||| |||| |||||||||| |||||||||||||||||||||| ||||||||| ||     
T  24583735 ctctaaatcctttctaatggtttctctattagtttttttttgtcttcatctatctcttttaacttgactctcctccatttgatctactcttcttacgaca 24583834  T
Q  101 gcatct 106  Q
    ||||||    
T  24583835 gcatct 24583840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 35643127 - 35643065
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaac 63  Q
    ||||||||| |||||||||||||||| ||| |||||| |||||||| ||||||||||||||||    
T  35643127 ctctaaatcctttctaatggtttctctaatagttttcctaggtctttctctacctcttttaac 35643065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 6237856 - 6237951
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttac 96  Q
    ||||||||| ||||||||||||| ||   | |||||  |||||||| ||||||||||||| || || ||||||||||| ||||||| |||||||||    
T  6237856 ctctaaatcatttctaatggtttatcttctagtttttctaggtcttactctacctcttttgacatgtctctcctccatctgatctactcttcttac 6237951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 31959700 - 31959625
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctcc 76  Q
    ||||||||| ||||||||||||||||  || |||||| |||||||||  ||| ||||||| |||||||||||||||    
T  31959700 ctctaaatcctttctaatggtttctcttatagttttcctaggtcttcgcctaactcttttgacctgactctcctcc 31959625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 45543175 - 45543234
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctctttt 60  Q
    |||||||||||||||||| |||||||  || |||||   |||||||||||||||||||||    
T  45543175 ctctaaatcttttctaatagtttctcttatagtttttccaggtcttcctctacctctttt 45543234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 94; Significance: 6e-46; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 35033325 - 35033220
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| |    
T  35033325 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatttactcttcttacaatg 35033226  T
Q  101 gcatct 106  Q
    ||||||    
T  35033225 gcatct 35033220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 22251 - 22146
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||| |||||||||||||    
T  22251 ctctaaatcctttctaatggtttctctaatggttttcttaagtcttcctctacctcttttaacccgactctcctccatttaatctactcttcttacaacg 22152  T
Q  101 gcatct 106  Q
    ||||||    
T  22151 gcatct 22146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 4 - 106
Target Start/End: Complemental strand, 5169008 - 5168906
Alignment:
Q  4 taaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacggca 103  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| |||||| |||||||||    
T  5169008 taaatcctttctaatggtttctctaatggttttcttaggtcttcctctacctcttttaactagactctcctccatttgatctactcttctaacaacggca 5168909  T
Q  104 tct 106  Q
    |||    
T  5168908 tct 5168906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 25191556 - 25191451
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    |||||||||||||||||||||||||| |||| ||||||||| |||||||||||||||||||||| | ||||||||||||||||||  |||||||||||||    
T  25191556 ctctaaatcttttctaatggtttctcaaatgattttcttagttcttcctctacctcttttaaccgggctctcctccatttgatcttctcttcttacaacg 25191457  T
Q  101 gcatct 106  Q
    | ||||    
T  25191456 gtatct 25191451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 52138979 - 52138874
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||| |||||||||||||||| ||| |||||| ||||||||||||||||||||||||| |||||||||||||||| ||||| ||||||||| |||    
T  52138979 ctctaaatcctttctaatggtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatttaatctattcttcttaccacg 52138880  T
Q  101 gcatct 106  Q
    ||||||    
T  52138879 gcatct 52138874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 28 - 106
Target Start/End: Complemental strand, 53519744 - 53519666
Alignment:
Q  28 aatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacggcatct 106  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||    
T  53519744 aatggttttcttaggtcttcctctacctcttttaacatgactctcctccatttgatctactcttcttacaacggcatct 53519666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 33272126 - 33272231
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||| |||||||||||||||| ||| |||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||  |||||||| |||    
T  33272126 ctctaaatcatttctaatggtttctctaatagttttcgtaggtcttcctctacctcttttaacttgactctcctccatttgatatacacttcttaccacg 33272225  T
Q  101 gcatct 106  Q
    ||||||    
T  33272226 gcatct 33272231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 47233699 - 47233804
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    |||||| || |||||||||||||||| ||| |||||||||||||||| || || |||||||||||||||||||||||||||||||| |||||| ||||||    
T  47233699 ctctaattcctttctaatggtttctctaatagttttcttaggtcttcttcaacatcttttaacctgactctcctccatttgatctactcttctaacaacg 47233798  T
Q  101 gcatct 106  Q
    ||||||    
T  47233799 gcatct 47233804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 54279199 - 54279094
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||| |||||||||||||||| ||| |||||| ||||||||| ||||||||||||||| |||||||||||||||||||||| |||| |||| |||    
T  54279199 ctctaaatcctttctaatggtttctctaatagttttcctaggtcttcttctacctcttttaacttgactctcctccatttgatctactctttttaccacg 54279100  T
Q  101 gcatct 106  Q
    ||||||    
T  54279099 gcatct 54279094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 28245616 - 28245511
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||| |||||||| ||||||| ||| |||||| ||||||||| ||||||||||||||| ||||||||||||||||||| || ||||||||| |||    
T  28245616 ctctaaatcatttctaatcgtttctctaatagttttcctaggtcttcatctacctcttttaacttgactctcctccatttgatatactcttcttaccacg 28245517  T
Q  101 gcatct 106  Q
    ||||||    
T  28245516 gcatct 28245511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 48508414 - 48508319
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttac 96  Q
    ||||||||| ||||||||||||||||  || |||||| |||||||||||||||||||||| ||||||||||||||||| ||||||| |||||||||    
T  48508414 ctctaaatcctttctaatggtttctcttatagttttcctaggtcttcctctacctcttttgacctgactctcctccatctgatctactcttcttac 48508319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 6 - 106
Target Start/End: Complemental strand, 45728324 - 45728222
Alignment:
Q  6 aatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttg--atctaatcttcttacaacggca 103  Q
    |||| |||||||||||||||| ||| |||||| |||||||||||||| |||||||||| |||||||||||||||||  || || ||||||||||||| ||    
T  45728324 aatcctttctaatggtttctctaatagttttcctaggtcttcctctatctcttttaacatgactctcctccatttgatatatactcttcttacaacgaca 45728225  T
Q  104 tct 106  Q
    |||    
T  45728224 tct 45728222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 9 - 96
Target Start/End: Complemental strand, 38850291 - 38850204
Alignment:
Q  9 cttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttac 96  Q
    ||||||||||||||| || |||  ||||| |||||||||||||||||||| |||| ||||||||||||||| |||||| |||||||||    
T  38850291 cttttctaatggtttatctaataattttcctaggtcttcctctacctcttctaacttgactctcctccattcgatctactcttcttac 38850204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 51447820 - 51447918
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||| |||||||||||||||| ||| |||||| |||||||||       ||||||||| |||||||||||||||||||||| ||||||||| |||    
T  51447820 ctctaaatcctttctaatggtttctctaatagttttcctaggtcttc-------tcttttaacttgactctcctccatttgatctactcttcttaccacg 51447912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 32 - 106
Target Start/End: Complemental strand, 38060579 - 38060505
Alignment:
Q  32 gttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacggcatct 106  Q
    |||||| ||||||| ||||||||| |||||||||||||||||||||||| ||||| ||||||||| |||||||||    
T  38060579 gttttcctaggtctccctctaccttttttaacctgactctcctccatttaatctactcttcttacgacggcatct 38060505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 19162690 - 19162785
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttac 96  Q
    |||||||||||| ||||| |||||||  || | |||| |||||||||||||| ||||||| ||||||||||||| ||| ||||||| |||||||||    
T  19162690 ctctaaatctttcctaatagtttctcttatagatttcctaggtcttcctctaactcttttgacctgactctccttcatctgatctactcttcttac 19162785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 12096808 - 12096875
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgac 68  Q
    ||||||||| ||||||||||||| || ||| |||||| ||||||||||||||||||||||||| ||||    
T  12096808 ctctaaatcctttctaatggtttttctaatagttttcctaggtcttcctctacctcttttaacttgac 12096875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 43694874 - 43694973
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||||||| |||||||||||| ||| |||||| ||| | |||||||||||||||||||       |||| ||||||||||||||||||||| |||    
T  43694874 ctctaaatcttttttaatggtttctctaatagttttcctagattttcctctacctcttttaac------ttccttcatttgatctaatcttcttacgacg 43694967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 15 - 96
Target Start/End: Original strand, 48953538 - 48953619
Alignment:
Q  15 taatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttac 96  Q
    ||||| ||||||  || |||||| ||||||||||||||| |||||| ||| ||||||||||||| ||||||| |||||||||    
T  48953538 taatgatttctcttatagttttcctaggtcttcctctacttcttttgacccgactctcctccatctgatctactcttcttac 48953619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 54425068 - 54425153
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatcta 86  Q
    ||||||||| ||| |||||||  |||  || | ||||||||||||||||||||||||||| |||||| |||||||||| |||||||    
T  54425068 ctctaaatcctttttaatggtccctcttatagctttcttaggtcttcctctacctcttttgacctgaatctcctccatctgatcta 54425153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 45289194 - 45289289
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttac 96  Q
    |||||||||||| ||||| |||||||  || |||||| ||| |||||||||| ||||| ||| || ||| |||||||| ||||||| |||||||||    
T  45289194 ctctaaatctttcctaatagtttctcttatagttttcatagatcttcctctatctcttgtaatctaactatcctccatctgatctactcttcttac 45289289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 39235316 - 39235226
Alignment:
Q  2 tctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttc 92  Q
    ||||||||||| ||||| |||| ||  || ||||| || |||||||||||||||||||| | |||||| |||||||| ||||||| |||||    
T  39235316 tctaaatctttcctaatagtttatcctatagtttttttgggtcttcctctacctcttttgatctgactttcctccatctgatctactcttc 39235226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 96
Target Start/End: Original strand, 52678982 - 52679046
Alignment:
Q  32 gttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttac 96  Q
    |||||| ||||||||| ||||| |||||||||| |||||||||||||  |||||| | |||||||    
T  52678982 gttttcctaggtcttcttctacatcttttaacccgactctcctccatccgatctatttttcttac 52679046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 92
Target Start/End: Complemental strand, 38430986 - 38430936
Alignment:
Q  42 gtcttcctctacctcttttaacctgactctcctccatttgatctaatcttc 92  Q
    ||||||||||||||||||| |  |||||||||||||| ||||||| |||||    
T  38430986 gtcttcctctacctcttttgatttgactctcctccatctgatctactcttc 38430936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 96
Target Start/End: Complemental strand, 19758040 - 19757984
Alignment:
Q  39 taggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttac 96  Q
    ||||||||||||||||| |||| | || |||||||||||| ||||||| |||||||||    
T  19758040 taggtcttcctctacct-ttttgatctaactctcctccatctgatctactcttcttac 19757984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 39600784 - 39600869
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatcta 86  Q
    ||||||||||||  |||| |||||||  || |||||  ||||||||||||||||||||  || |||||| ||||| || |||||||    
T  39600784 ctctaaatctttcttaatagtttctcttatagtttttctaggtcttcctctacctcttgcaatctgactatcctcgatctgatcta 39600869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 90; Significance: 2e-43; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 32479217 - 32479116
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||    
T  32479217 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctctttcaacctgtctctcctccatttgatctactcttcttacaacg 32479118  T
Q  101 gc 102  Q
    ||    
T  32479117 gc 32479116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 27983372 - 27983267
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||||||||||| ||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||    
T  27983372 ctctaaatcttttctaaaggtttatcgaatggttttcttatgtcttcctctacctcttttaacctgactctcctccatttgatatactcttcttacaacg 27983273  T
Q  101 gcatct 106  Q
    ||||||    
T  27983272 gcatct 27983267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 1777120 - 1777225
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    |||||||||||||||||||||||||| ||| |||||| ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||    
T  1777120 ctctaaatcttttctaatggtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccacg 1777219  T
Q  101 gcatct 106  Q
    ||||||    
T  1777220 gcatct 1777225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 27450282 - 27450387
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    |||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||| |||||||||||||| |||||||||||||    
T  27450282 ctctaaatcttttccaatggtttctcgaatgattttcttaggtcttcctttacctcttttaacctgattctactccatttgatctactcttcttacaacg 27450381  T
Q  101 gcatct 106  Q
    ||||||    
T  27450382 gcatct 27450387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 48174196 - 48174301
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||| |||||||||||||||| ||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||    
T  48174196 ctctaaatcctttctaatggtttctctaatagttttcttaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccacg 48174295  T
Q  101 gcatct 106  Q
    ||||||    
T  48174296 gcatct 48174301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 56375469 - 56375364
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||| |||||||||||||||| ||| |||||||||||||||||||||||||||||||| |||||||||||||||| ||||| ||||||||| |||    
T  56375469 ctctaaatcctttctaatggtttctctaatagttttcttaggtcttcctctacctcttttaacttgactctcctccattttatctactcttcttaccacg 56375370  T
Q  101 gcatct 106  Q
    ||||||    
T  56375369 gcatct 56375364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 436408 - 436303
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||| |||||| ||||||||| ||| |||||| ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||    
T  436408 ctctaaatcctttctagtggtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccacg 436309  T
Q  101 gcatct 106  Q
    ||||||    
T  436308 gcatct 436303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 4441032 - 4440927
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||| |||||||||||||||| ||| |||||| ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| ||     
T  4441032 ctctaaatcctttctaatggtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccaca 4440933  T
Q  101 gcatct 106  Q
    ||||||    
T  4440932 gcatct 4440927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 31959917 - 31960022
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||| |||||||| ||||||| ||| |||||| ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||    
T  31959917 ctctaaatcctttctaatagtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccacg 31960016  T
Q  101 gcatct 106  Q
    ||||||    
T  31960017 gcatct 31960022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 52569618 - 52569723
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||| |||||||||||||||  ||| |||||| ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||    
T  52569618 ctctaaatcctttctaatggtttctttaatagttttcgtaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccacg 52569717  T
Q  101 gcatct 106  Q
    ||||||    
T  52569718 gcatct 52569723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 39708612 - 39708507
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||| ||||||||||||||||  || |||||| |||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||| |||    
T  39708612 ctctaaatcctttctaatggtttctcttatagttttcctaggtcttcctctacctcttttgacctgactctcctccatctgatctactcttcttacgacg 39708513  T
Q  101 gcatct 106  Q
    ||||||    
T  39708512 gcatct 39708507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 48622646 - 48622749
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||||||||||||| |||||| ||| |||||| ||||||||||||||||||||||||| |||||||||||||||||||||  | ||||||| |||    
T  48622646 ctctaaatcttttctaatgatttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatttgatcttcttttcttaccacg 48622745  T
Q  101 gcat 104  Q
    ||||    
T  48622746 gcat 48622749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 4 - 106
Target Start/End: Original strand, 46582931 - 46583033
Alignment:
Q  4 taaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacggca 103  Q
    |||||| |||| ||||||||||| ||| |||||| ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| ||| ||    
T  46582931 taaatcctttccaatggtttctctaatagttttcataggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccacgaca 46583030  T
Q  104 tct 106  Q
    |||    
T  46583031 tct 46583033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 21237037 - 21236952
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatcta 86  Q
    ||||||||| |||||||||||||||| ||| |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  21237037 ctctaaatcctttctaatggtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatttgatcta 21236952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 33190951 - 33191056
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||| |||||||||||||||| ||| |||||| ||||||||||||||||||||||||| ||||||| ||||||||||||||  |||||||  |||    
T  33190951 ctctaaatcctttctaatggtttctctaatagttttcctaggtcttcctctacctcttttaacttgactcttctccatttgatctacccttcttaacacg 33191050  T
Q  101 gcatct 106  Q
    ||||||    
T  33191051 gcatct 33191056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 43434103 - 43433998
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||| |||  ||||||||||| ||| |||||| ||||||||||||||||||||||||| ||||||||||||||||||| || ||||||||| |||    
T  43434103 ctctaaatcattttcaatggtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatttgatttactcttcttaccacg 43434004  T
Q  101 gcatct 106  Q
    ||||||    
T  43434003 gcatct 43433998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 53707973 - 53707868
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||| |||||||||||||||| ||| |||||| | ||||||||||||||||||||||| ||||| ||||||||||||| || ||||||||| |||    
T  53707973 ctctaaatcctttctaatggtttctctaatagttttcctcggtcttcctctacctcttttaacttgactatcctccatttgatatactcttcttaccacg 53707874  T
Q  101 gcatct 106  Q
    ||||||    
T  53707873 gcatct 53707868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 26037608 - 26037711
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    |||||||||||| ||||| |||||||  ||||||||| ||||| ||||||| |||||||||||||||||||||||||| ||||||| ||||||||| |||    
T  26037608 ctctaaatctttcctaatagtttctcttatggttttcctaggttttcctctgcctcttttaacctgactctcctccatctgatctactcttcttacgacg 26037707  T
Q  101 gcat 104  Q
    ||||    
T  26037708 gcat 26037711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 5 - 100
Target Start/End: Original strand, 39100643 - 39100738
Alignment:
Q  5 aaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||| |||||||||||||||| ||| |||||| ||||||||||||||||||||||||||||||| || ||||| ||||||| |||||||||||||    
T  39100643 aaatcctttctaatggtttctctaatagttttcctaggtcttcctctacctcttttaacctgactatcttccatctgatctactcttcttacaacg 39100738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 50679683 - 50679588
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttac 96  Q
    ||||||||| |||||||||||||||| ||| |||||| |||||||||||||||||||| |||| |||||||||||||||| ||||| |||||||||    
T  50679683 ctctaaatcctttctaatggtttctctaatagttttcctaggtcttcctctacctcttctaacttgactctcctccatttaatctactcttcttac 50679588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 20192212 - 20192107
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||| |||||||||||||||| ||| ||||| | ||||||||| |||||||||||||| ||||||||||||||||||| || ||||||||| ||     
T  20192212 ctctaaatcctttctaatggtttctctaatagttttttcaggtcttccactacctcttttaacttgactctcctccatttgatatactcttcttaccaca 20192113  T
Q  101 gcatct 106  Q
    ||||||    
T  20192112 gcatct 20192107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 33227388 - 33227283
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||| ||||||||||||| || ||| |||||| ||||||||| ||||||||||||||| |||||||| ||||||||||||| ||||||||  |||    
T  33227388 ctctaaatcctttctaatggtttttctaatagttttcctaggtcttcatctacctcttttaacttgactctcttccatttgatctactcttcttaacacg 33227289  T
Q  101 gcatct 106  Q
    ||||||    
T  33227288 gcatct 33227283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 23906400 - 23906505
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||| |||||||||||||||| ||| |||||  ||||||||| | ||||| ||||||| |||||||||||||||| ||||| ||||||||| |||    
T  23906400 ctctaaatcctttctaatggtttctctaatagtttttctaggtcttcatttaccttttttaacttgactctcctccatttaatctactcttcttaccacg 23906499  T
Q  101 gcatct 106  Q
    ||||||    
T  23906500 gcatct 23906505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 47265298 - 47265403
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||  |||||||||||||||| ||| |||||| |||||||||||||||||||||||||  || ||||||||||||  |||| ||||||||| |||    
T  47265298 ctctaaattctttctaatggtttctctaatagttttcctaggtcttcctctacctcttttaactagaatctcctccatttagtctactcttcttacgacg 47265397  T
Q  101 gcatct 106  Q
    ||||||    
T  47265398 gcatct 47265403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 50287141 - 50287036
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||| ||| ||||| || ||| ||| |||||| ||||||||| ||||||||||||||| ||||||||||||||| |||||| ||||||||| |||    
T  50287141 ctctaaatcctttataatgattactctaatagttttcataggtcttcttctacctcttttaacttgactctcctccattcgatctactcttcttaccacg 50287042  T
Q  101 gcatct 106  Q
    ||||||    
T  50287041 gcatct 50287036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 2 - 106
Target Start/End: Complemental strand, 37798029 - 37797926
Alignment:
Q  2 tctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacgg 101  Q
    |||||||| ||||||||| |||||| ||| |||||| ||| ||||||||||  |||||||||||||||||| ||||||||||||| ||||||||| ||||    
T  37798029 tctaaatcctttctaatgatttctctaatagttttcctagatcttcctctaa-tcttttaacctgactctcatccatttgatctactcttcttacgacgg 37797931  T
Q  102 catct 106  Q
    |||||    
T  37797930 catct 37797926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 21528467 - 21528416
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctcta 52  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21528467 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctcta 21528416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 5 - 100
Target Start/End: Original strand, 37773558 - 37773653
Alignment:
Q  5 aaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||| |||||||||||||||| ||| |||||| ||||| ||| ||||||||||||||  |||||||| ||||||||||||| ||| |||||||||    
T  37773558 aaatcctttctaatggtttctctaatagttttcctaggtattcatctacctcttttaaattgactctcatccatttgatctactctacttacaacg 37773653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 8286618 - 8286505
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacc--------tcttttaacctgactctcctccatttgatctaatcttc 92  Q
    ||||||||| |||||||||||||||| ||| |||||| ||||||||||||||||        |||| |||| |||||||||||||||| ||||| |||||    
T  8286618 ctctaaatcctttctaatggtttctctaatagttttcctaggtcttcctctacctcttgtcctcttctaacttgactctcctccatttcatctactcttc 8286519  T
Q  93 ttacaacggcatct 106  Q
    |||| |||||||||    
T  8286518 ttacgacggcatct 8286505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 106
Target Start/End: Original strand, 20601760 - 20601854
Alignment:
Q  11 tttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacggcatct 106  Q
    ||||||||||||||||  || ||||||  |||||||| |||||||||||| ||||||||||||||||| | || || |||||||||||||||||||    
T  20601760 tttctaatggtttctcttatagttttca-aggtcttcttctacctcttttgacctgactctcctccatcttatatactcttcttacaacggcatct 20601854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 105
Target Start/End: Original strand, 41009454 - 41009556
Alignment:
Q  2 tctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacgg 101  Q
    |||||||| |||||||| |||||||  || ||||||  ||||||||||||||| ||||| ||||||||||||||||| ||||||| | ||||||| || |    
T  41009454 tctaaatcatttctaatagtttctcttatagttttcc-aggtcttcctctaccacttttgacctgactctcctccatctgatctatttttcttacgactg 41009552  T
Q  102 catc 105  Q
    ||||    
T  41009553 catc 41009556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 20591408 - 20591500
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttaca 97  Q
    ||||||||| ||||||||||  ||||  || ||||||||||||||||||||||||||    || |||||||||||||| |||| || ||||||||||    
T  20591408 ctctaaatcctttctaatggggtctcttatagttttcttaggtcttcctctacctct----acttgactctcctccatctgatatactcttcttaca 20591500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 45204942 - 45205039
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaac 99  Q
    |||||||||||| ||||| |||||||  || |||||  |||||||||||| ||||||||| | ||| ||||||||||| ||||||| ||||| ||||||    
T  45204942 ctctaaatctttcctaatagtttctcttatagtttttctaggtcttcctccacctcttttgatctg-ctctcctccatctgatctactcttcgtacaac 45205039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 28236361 - 28236257
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||| ||| ||| | |||||| ||| |||||| ||||||||||||||||  ||||||| ||| ||||| |||||||||| | ||||||||| |||    
T  28236361 ctctaaatcatttataaagatttctctaatagttttcctaggtcttcctctacc-attttaacttgattctccgccatttgatcaactcttcttacgacg 28236263  T
Q  101 gcatct 106  Q
     |||||    
T  28236262 acatct 28236257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 6957777 - 6957726
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctcta 52  Q
    ||||||||| |||||||||||||||| ||| |||||| ||||||||||||||    
T  6957777 ctctaaatcctttctaatggtttctctaatagttttcctaggtcttcctcta 6957726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 7947116 - 7947065
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctcta 52  Q
    ||||||||| |||| ||||||||||| ||| |||||||||||||||||||||    
T  7947116 ctctaaatcctttcaaatggtttctctaatagttttcttaggtcttcctcta 7947065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 12494842 - 12494791
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctcta 52  Q
    ||||||||| |||||||||||||||| ||| |||||| ||||||||||||||    
T  12494842 ctctaaatcctttctaatggtttctctaatagttttcctaggtcttcctcta 12494791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 28351738 - 28351643
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttac 96  Q
    ||||||||||||  |||| |||||||  || |||||  |||||||| ||||||||||| ||| |||||| |||||||| ||||||| ||| |||||    
T  28351738 ctctaaatctttcgtaatagtttctcttatagtttttctaggtctttctctacctcttgtaatctgactatcctccatctgatctactctccttac 28351643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 69
Target Start/End: Original strand, 51811390 - 51811449
Alignment:
Q  10 ttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgact 69  Q
    |||||||||| ||||||| ||| ||||||||||||||| ||||| |||||||| ||||||    
T  51811390 ttttctaatgatttctcggatgattttcttaggtcttcatctacttcttttaatctgact 51811449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 50862823 - 50862764
Alignment:
Q  1 ctctaaatcttttctaatggtttctcg-aatggttttcttaggtcttcctctacctcttt 59  Q
    ||||||||| |||||||||||||||   ||| |||||| |||||||||||||||||||||    
T  50862823 ctctaaatcctttctaatggtttcttttaatagttttcctaggtcttcctctacctcttt 50862764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 51421909 - 51421818
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttc 92  Q
    |||||||||||| ||||| |||||||  || |||||  ||  |||||||||||||||||| | |||||   ||||||||||||||| |||||    
T  51421909 ctctaaatctttcctaatagtttctcttatagtttttctaaatcttcctctacctcttttgatctgacaaacctccatttgatctactcttc 51421818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 31459147 - 31459093
Alignment:
Q  39 taggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttct 93  Q
    ||||||||||| |||||||||| | ||||||||||| ||| ||||||| ||||||    
T  31459147 taggtcttcctttacctcttttgatctgactctcctacatatgatctactcttct 31459093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 35690450 - 35690373
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccat 78  Q
    |||||||| |||  |||| |||||||  || |||||  |||||||||||||||||||||| | |||||| ||||||||    
T  35690450 ctctaaatttttcgtaatagtttctcttatagtttttctaggtcttcctctacctcttttgatctgactttcctccat 35690373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 87; Significance: 9e-42; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 13561489 - 13561579
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatctt 91  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  13561489 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctactctt 13561579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 3302023 - 3301918
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | |||||| ||||||    
T  3302023 ctctaaatcttttataatggtttctctaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgattcattcttctaacaacg 3301924  T
Q  101 gcatct 106  Q
    ||||||    
T  3301923 gcatct 3301918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 38685146 - 38685041
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||| |||||||||||||||| ||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||    
T  38685146 ctctaaatcctttctaatggtttctctaatagttttcctaggtcttcctctacctcttttaacctgactctcctccatttgatctactcttcttacgacg 38685047  T
Q  101 gcatct 106  Q
    ||||||    
T  38685046 gcatct 38685041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 1287682 - 1287787
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||| |||||||||||||||| ||| |||||| ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||    
T  1287682 ctctaaatcctttctaatggtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccacg 1287781  T
Q  101 gcatct 106  Q
    ||||||    
T  1287782 gcatct 1287787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 4496563 - 4496458
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||| |||||||||||||||| ||| |||||| ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||    
T  4496563 ctctaaatcctttctaatggtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccacg 4496464  T
Q  101 gcatct 106  Q
    ||||||    
T  4496463 gcatct 4496458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 14911351 - 14911266
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatcta 86  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  14911351 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacccgactctccttcatttgatcta 14911266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 16347481 - 16347586
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    |||||||||||||||||||||||||  ||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |    
T  16347481 ctctaaatcttttctaatggtttctttaatagttttcctaggtcttcctctacctcttttaacctgactctcctccatttgatctactcttcttgcaaag 16347580  T
Q  101 gcatct 106  Q
    ||||||    
T  16347581 gcatct 16347586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 20456952 - 20456847
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||| |||||||||||||||| ||| |||||| ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||    
T  20456952 ctctaaatcctttctaatggtttctctaatagttttcgtaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccacg 20456853  T
Q  101 gcatct 106  Q
    ||||||    
T  20456852 gcatct 20456847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 24178689 - 24178584
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||| |||||||||||||||| ||| |||||| ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||    
T  24178689 ctctaaatcctttctaatggtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccacg 24178590  T
Q  101 gcatct 106  Q
    ||||||    
T  24178589 gcatct 24178584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 12492487 - 12492592
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||| |||||||||||||||| ||| |||||| ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||  |||    
T  12492487 ctctaaatcctttctaatggtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaacacg 12492586  T
Q  101 gcatct 106  Q
    ||||||    
T  12492587 gcatct 12492592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 2075576 - 2075682
Alignment:
Q  1 ctctaaatc-ttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaac 99  Q
    ||||||||| ||||||||||||||||| ||| ||| || ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| ||    
T  2075576 ctctaaatccttttctaatggtttctctaatagttatcctaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccac 2075675  T
Q  100 ggcatct 106  Q
    |||||||    
T  2075676 ggcatct 2075682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 2915598 - 2915703
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||| |||||||||||||||| ||| ||| || ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| | |    
T  2915598 ctctaaatcctttctaatggtttctctaatagttatcctaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccaag 2915697  T
Q  101 gcatct 106  Q
    ||||||    
T  2915698 gcatct 2915703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 28976962 - 28977065
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||| ||| |||||||||||| ||| |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||  |||||||| |||    
T  28976962 ctctaaatcctttataatggtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctccatttgatctacccttcttaccacg 28977061  T
Q  101 gcat 104  Q
    ||||    
T  28977062 gcat 28977065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 14 - 106
Target Start/End: Complemental strand, 14665880 - 14665788
Alignment:
Q  14 ctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacggcatct 106  Q
    ||||||||||||| ||| |||||| ||||||| ||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||    
T  14665880 ctaatggtttctctaatagttttcctaggtctccctctacctcttttaacctgactctgctccatttgatctactcttcttacgacggcatct 14665788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 1275443 - 1275340
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||| ||| |||||||||||| ||| |||||  |||||||||||||||| || ||||| |||||||||||||||||||||| ||||||||| |||    
T  1275443 ctctaaatcctttataatggtttctctaatagtttttctaggtcttcctctacccctgttaacttgactctcctccatttgatctactcttcttaccacg 1275344  T
Q  101 gcat 104  Q
    ||||    
T  1275343 gcat 1275340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 10639481 - 10639378
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||| |||||||||||||||| ||| |||||| ||||||||||||||||||||||||| |||  |||||||||||| |||| ||||||||| | |    
T  10639481 ctctaaatcctttctaatggtttctctaatagttttcctaggtcttcctctacctcttttaacttga--ctcctccatttgttctactcttcttaccatg 10639384  T
Q  101 gcatct 106  Q
    ||||||    
T  10639383 gcatct 10639378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 34273192 - 34273118
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctc 75  Q
    ||||||||| |||||||||||||||| ||| |||||| ||||||||||||||||||||||||| |||||||||||    
T  34273192 ctctaaatcctttctaatggtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctcctc 34273118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 96
Target Start/End: Original strand, 26884822 - 26884886
Alignment:
Q  32 gttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttac 96  Q
    |||||| ||| || ||||||||||||||| ||| ||||||||||||| ||||||| |||||||||    
T  26884822 gttttcctagctcatcctctacctcttttgacccgactctcctccatctgatctactcttcttac 26884886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 100
Target Start/End: Complemental strand, 36215633 - 36215578
Alignment:
Q  45 ttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    |||||||||||||||| |||||||||||||||||  |||||| ||||||| |||||    
T  36215633 ttcctctacctcttttgacctgactctcctccatccgatctactcttctttcaacg 36215578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 29816561 - 29816513
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcct 49  Q
    ||||||||| |||||||||||||||| ||| |||||| |||||||||||    
T  29816561 ctctaaatcctttctaatggtttctctaatagttttcctaggtcttcct 29816513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 28061 - 27990
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctc 72  Q
    |||||||||||| ||||| |||||||  || |||||  |||||||||||| ||||||||| | |||||||||    
T  28061 ctctaaatctttcctaatagtttctcttatagtttttctaggtcttcctcaacctcttttgatctgactctc 27990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 38501521 - 38501626
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||  |||||||| ||||||   || ||| || ||||||||| || | ||||||| | | ||||||||||||| | ||||| ||||||||| |||    
T  38501521 ctctaaatactttctaatagtttcttttatagttctcctaggtcttcatccatctcttttgatccgactctcctccatctaatctactcttcttacgacg 38501620  T
Q  101 gcatct 106  Q
    ||||||    
T  38501621 gcatct 38501626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 11675654 - 11675594
Alignment:
Q  36 tcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttac 96  Q
    |||||||||||||||||| |||||| | |||||| |||||| | ||||||| ||| |||||    
T  11675654 tcttaggtcttcctctacatcttttgatctgactatcctccctatgatctactctccttac 11675594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 82; Significance: 9e-39; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 5258251 - 5258356
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||||| ||||||| |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  5258251 ctctaaatcttgtctaatgatttctcgaatggttttcttaggtctttctctacctcttttaacatgactctcctccatttgatctactcttcttacaacg 5258350  T
Q  101 gcatct 106  Q
    | ||||    
T  5258351 gaatct 5258356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 35043544 - 35043649
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||| ||||||||||||| | |||||||||||    
T  35043544 ctctaaatcctttctaatggtttctctaatggttttcttaggtcttcatctacttcttttaacctgactctcgtccatttgatctacttttcttacaacg 35043643  T
Q  101 gcatct 106  Q
    ||||||    
T  35043644 gcatct 35043649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 21351940 - 21352044
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    |||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| |||||| |||| |    
T  21351940 ctctaaatcttttctaatggtttctctattggttttcttaggtcttcctctacctcttttaacctgactcttctccatttgttctattcttctaacaatg 21352039  T
Q  101 gcatc 105  Q
    |||||    
T  21352040 gcatc 21352044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 3 - 108
Target Start/End: Complemental strand, 7133923 - 7133818
Alignment:
Q  3 ctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacggc 102  Q
    ||||||| |||||||||||||||| ||| |||||  ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||    
T  7133923 ctaaatcatttctaatggtttctctaatagtttttctaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccacggc 7133824  T
Q  103 atcttc 108  Q
    ||||||    
T  7133823 atcttc 7133818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 3 - 108
Target Start/End: Complemental strand, 7136846 - 7136741
Alignment:
Q  3 ctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacggc 102  Q
    ||||||| |||||||||||||||| ||| |||||  ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||    
T  7136846 ctaaatcatttctaatggtttctctaatagtttttctaggtcttcctctacctcttttaacttgactctcctccatttgatctactcttcttaccacggc 7136747  T
Q  103 atcttc 108  Q
    ||||||    
T  7136746 atcttc 7136741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 30031435 - 30031330
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||| |||||||| ||||||| ||| |||||| ||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| |||    
T  30031435 ctctaaatcctttctaattgtttctctaatagttttcctaggtctccctctacctcttttaacctgactctcctccatttgatctactcttcttacgacg 30031336  T
Q  101 gcatct 106  Q
    ||||||    
T  30031335 gcatct 30031330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 32756100 - 32755993
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    |||||||||||||||||||||||||| ||| |||||| |||||||| |||||||||||||||| |||||||||||||||||||||| ||||||||  |||    
T  32756100 ctctaaatcttttctaatggtttctctaatagttttcctaggtctttctctacctcttttaacttgactctcctccatttgatctactcttcttattacg 32756001  T
Q  101 gcatcttc 108  Q
     |||||||    
T  32756000 acatcttc 32755993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 5632001 - 5631896
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| |  ||||||||| ||||||||||||||||||||||| | ||||||| | |    
T  5632001 ctctaaatcttttctaatggtttctcgaatggttttcttaagtcttcctttgtctcttttaatctgactctcctccatttgatctactattcttacgaag 5631902  T
Q  101 gcatct 106  Q
    ||||||    
T  5631901 gcatct 5631896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 28085555 - 28085460
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttac 96  Q
    ||||||||| |||||||||||||||| ||| |||||| ||||||||||||||||||||||||| ||||||| |||||||||||||| |||||||||    
T  28085555 ctctaaatcctttctaatggtttctctaatagttttcctaggtcttcctctacctcttttaacttgactctactccatttgatctactcttcttac 28085460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 20427740 - 20427844
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    |||||||| ||||||||||||||||| ||| ||||||||||||||||||| ||||||| ||||||||||| |||| ||||||| || |||||||||||||    
T  20427740 ctctaaat-ttttctaatggtttctctaatagttttcttaggtcttcctcaacctcttgtaacctgactcccctctatttgatttactcttcttacaacg 20427838  T
Q  101 gcatct 106  Q
    ||||||    
T  20427839 gcatct 20427844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 608340 - 608231
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttctta----ggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttac 96  Q
    |||||||||||||||||||||||||||||| |||||||||    ||||||| || ||||||||||| ||||||||||||||||||||| | |||||||||    
T  608340 ctctaaatcttttctaatggtttctcgaatagttttcttaattaggtcttcatcaacctcttttaatctgactctcctccatttgatccactcttcttac 608241  T
Q  97 aacggcatct 106  Q
    || |||||||    
T  608240 aaaggcatct 608231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 2 - 106
Target Start/End: Complemental strand, 12890753 - 12890649
Alignment:
Q  2 tctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacgg 101  Q
    |||||||| ||||||||||||||||  || |||||| ||||||||| |||||||||||| |||| |||||||||||| ||||||| ||||||||| ||||    
T  12890753 tctaaatcctttctaatggtttctcttatagttttcctaggtcttcatctacctcttttgaccttactctcctccatctgatctactcttcttacgacgg 12890654  T
Q  102 catct 106  Q
    |||||    
T  12890653 catct 12890649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 32 - 106
Target Start/End: Original strand, 10099993 - 10100067
Alignment:
Q  32 gttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacggcatct 106  Q
    |||||| |||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||    
T  10099993 gttttcctaggtcttcctctacctcttttaaactgactctccttcatttgatctactcttcttacaacggcatct 10100067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 14030959 - 14030883
Alignment:
Q  28 aatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacggcat 104  Q
    |||| |||||||||||||||||||||||||||||| | |||||||| | |||||||||| |||||||||||||||||    
T  14030959 aatgtttttcttaggtcttcctctacctcttttaatccgactctccactatttgatctactcttcttacaacggcat 14030883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 9706949 - 9706848
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||| || |||| ||||| || |||||||| |||||  |||||  ||||||||||||||||||||| |||||||||||||| |||||| ||||||    
T  9706949 ctctaaatccttcctaacggtttatctaatggtttacttagcccttcccgtacctcttttaacctgactcttctccatttgatctactcttctaacaacg 9706850  T
Q  101 gc 102  Q
    ||    
T  9706849 gc 9706848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 106
Target Start/End: Complemental strand, 5081004 - 5080914
Alignment:
Q  16 aatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacggcatct 106  Q
    |||| |||||| ||| |||||| ||||||||| |||| ||||||||||  |||||||||||||||||| || ||||||||| || ||||||    
T  5081004 aatgatttctctaatagttttcctaggtcttcatctatctcttttaacgagactctcctccatttgatttactcttcttacgacagcatct 5080914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 106
Target Start/End: Original strand, 28026933 - 28027035
Alignment:
Q  4 taaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacggca 103  Q
    |||||||||  ||||||||| ||  || ||||| ||||||||||||||||||||| ||| ||||||||||||||| |||| || ||||| ||| || |||    
T  28026933 taaatctttcataatggtttttcttatagtttttttaggtcttcctctacctcttctaatctgactctcctccatctgatatactcttcgtactaccgca 28027032  T
Q  104 tct 106  Q
    |||    
T  28027033 tct 28027035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 34143868 - 34143924
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctct 57  Q
    ||||||||| ||| |||||||||||| ||| |||||| |||||||||||||||||||    
T  34143868 ctctaaatcctttgtaatggtttctctaatagttttcctaggtcttcctctacctct 34143924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 34156484 - 34156540
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctct 57  Q
    ||||||||| ||| |||||||||||| ||| |||||| |||||||||||||||||||    
T  34156484 ctctaaatcctttgtaatggtttctctaatagttttcctaggtcttcctctacctct 34156540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 96
Target Start/End: Complemental strand, 33497135 - 33497045
Alignment:
Q  4 taaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttac 96  Q
    |||||| ||||||| |||||||| ||| |||||  ||| ||| ||||||||||||||||| |||  ||||| ||||||||||  |||||||||    
T  33497135 taaatcctttctaaaggtttctctaatagtttttctagatctccctctacctcttttaacttga--ctccttcatttgatcttctcttcttac 33497045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 106
Target Start/End: Complemental strand, 30679544 - 30679480
Alignment:
Q  42 gtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacggcatct 106  Q
    |||||||| |||||||| |||| ||||||| |||||||||||||| | ||||||| ||| |||||    
T  30679544 gtcttcctatacctcttataacttgactctactccatttgatctactattcttacgacgacatct 30679480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 9593811 - 9593914
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    |||||| ||||| ||||| |||||||  ||  ||||  ||||||||||||||||||||   |  |||||||||||||| ||||||| ||||||||| ||     
T  9593811 ctctaagtctttcctaatagtttctcttataatttttctaggtcttcctctacctcttg--atttgactctcctccatctgatctactcttcttactaca 9593908  T
Q  101 gcatct 106  Q
    ||||||    
T  9593909 gcatct 9593914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 16757 - 16687
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactct 71  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16757 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactct 16687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0570 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 1051 - 1156
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||||||| |||||||||||| ||| |||||| ||||||||||||||||||||||||  ||||||| |||||||||||||| ||||||||| |||    
T  1051 ctctaaatcttttttaatggtttctctaatagttttcctaggtcttcctctacctcttttaatttgactcttctccatttgatctactcttcttaccacg 1150  T
Q  101 gcatct 106  Q
    ||||||    
T  1151 gcatct 1156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 86712 - 86817
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||| |||||| ||||||||| ||  |||||| ||||||| | |||||||||||||||||||||||||||||||||||||| ||||||||| |||    
T  86712 ctctaaatcctttctagtggtttctctaacagttttcctaggtctccatctacctcttttaacctgactctcctccatttgatctactcttcttacgacg 86811  T
Q  101 gcatct 106  Q
    ||||||    
T  86812 gcatct 86817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 31647 - 31542
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||| |||||||||||||||| ||| |||||| | ||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||| | |    
T  31647 ctctaaatcctttctaatggtttctctaatagttttcctgggtcttcctctacatcttttaacttgactctcctccatttgatctactcttcttaccatg 31548  T
Q  101 gcatct 106  Q
    ||||||    
T  31547 gcatct 31542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 2 - 106
Target Start/End: Complemental strand, 4814 - 4710
Alignment:
Q  2 tctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacgg 101  Q
    |||||||| ||||||||||||||||  ||||||||| || | |||| |||||||||||||| || |||||||||||| ||||||| ||||||||| ||||    
T  4814 tctaaatcctttctaatggtttctcttatggttttcctacgccttcatctacctcttttaatcttactctcctccatctgatctactcttcttacgacgg 4715  T
Q  102 catct 106  Q
    |||||    
T  4714 catct 4710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 82897 - 82795
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacg 100  Q
    ||||||||| |||||||||||||||| | | |||||| ||||||||||||||||||| ||||||  ||||||||||||||||| ||  |||||||| ||     
T  82897 ctctaaatcctttctaatggtttctcta-tagttttcctaggtcttcctctacctctcttaacc--actctcctccatttgatatacccttcttacgact 82801  T
Q  101 gcatct 106  Q
    ||||||    
T  82800 gcatct 82795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 106
Target Start/End: Original strand, 11651 - 11755
Alignment:
Q  2 tctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctctacctcttttaacctgactctcctccatttgatctaatcttcttacaacgg 101  Q
    |||||||  ||||||| | |||||| ||| |||||| ||||| ||| |||||||||| |||| |||||||| ||||||||||||| ||||||||  ||||    
T  11651 tctaaattctttctaacgatttctctaatagttttcctaggtattcgtctacctcttctaacttgactctcatccatttgatctactcttcttatgacgg 11750  T
Q  102 catct 106  Q
    |||||    
T  11751 catct 11755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 25635 - 25686
Alignment:
Q  1 ctctaaatcttttctaatggtttctcgaatggttttcttaggtcttcctcta 52  Q
    ||||||||| |||||||||||||||| ||| |||||| ||||||||||||||    
T  25635 ctctaaatcctttctaatggtttctctaatagttttcctaggtcttcctcta 25686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 96
Target Start/End: Original strand, 4418 - 4469
Alignment:
Q  45 ttcctctacctcttttaacctgactctcctccatttgatctaatcttcttac 96  Q
    ||||| ||||||||||||| ||| |||||||||||||||||| |||||||||    
T  4418 ttcctatacctcttttaacttgattctcctccatttgatctactcttcttac 4469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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