View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6480_high_12 (Length: 277)

Name: NF6480_high_12
Description: NF6480
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6480_high_12
NF6480_high_12
[»] chr5 (15 HSPs)
chr5 (1-254)||(6989198-6989451)
chr5 (26-254)||(21600582-21600811)
chr5 (107-254)||(1157717-1157864)
chr5 (27-227)||(41356037-41356238)
chr5 (98-248)||(18696464-18696617)
chr5 (105-211)||(27170662-27170768)
chr5 (105-211)||(7767579-7767685)
chr5 (3-208)||(7270014-7270224)
chr5 (98-211)||(1377684-1377799)
chr5 (98-208)||(26656188-26656299)
chr5 (98-208)||(26927775-26927886)
chr5 (3-177)||(38959174-38959346)
chr5 (105-208)||(6030877-6030980)
chr5 (169-254)||(38958638-38958723)
chr5 (14-74)||(1157868-1157928)
[»] chr2 (9 HSPs)
chr2 (3-254)||(17282435-17282687)
chr2 (3-254)||(1552084-1552335)
chr2 (3-254)||(3920968-3921219)
chr2 (3-254)||(1894785-1895030)
chr2 (66-211)||(17374738-17374885)
chr2 (63-211)||(11163591-11163736)
chr2 (105-208)||(4869095-4869198)
chr2 (174-208)||(34659786-34659820)
chr2 (105-153)||(34659739-34659787)
[»] chr4 (10 HSPs)
chr4 (3-254)||(53201626-53201877)
chr4 (77-254)||(34227490-34227668)
chr4 (3-254)||(47518948-47519197)
chr4 (3-254)||(31360559-31360811)
chr4 (3-211)||(14566531-14566744)
chr4 (98-211)||(23054823-23054937)
chr4 (127-192)||(6409488-6409554)
chr4 (126-185)||(54230195-54230255)
chr4 (207-254)||(6409594-6409641)
chr4 (106-192)||(24958162-24958248)
[»] chr1 (8 HSPs)
chr1 (3-254)||(25790998-25791249)
chr1 (160-254)||(34117577-34117671)
chr1 (105-211)||(39709551-39709657)
chr1 (105-208)||(615207-615310)
chr1 (4-177)||(34653251-34653429)
chr1 (112-192)||(11408355-11408436)
chr1 (166-211)||(34654463-34654508)
chr1 (105-183)||(6504324-6504403)
[»] chr7 (5 HSPs)
chr7 (3-254)||(11698840-11699091)
chr7 (112-210)||(29550068-29550166)
chr7 (105-208)||(3301892-3301996)
chr7 (110-211)||(1778049-1778151)
chr7 (105-211)||(39020736-39020855)
[»] chr6 (7 HSPs)
chr6 (3-230)||(20739969-20740196)
chr6 (105-211)||(3524106-3524213)
chr6 (105-211)||(34213936-34214042)
chr6 (3-134)||(1869296-1869427)
chr6 (105-211)||(21880890-21880988)
chr6 (207-248)||(3524057-3524098)
chr6 (127-171)||(11139610-11139654)
[»] chr8 (6 HSPs)
chr8 (3-211)||(20860658-20860867)
chr8 (105-211)||(10408290-10408396)
chr8 (3-164)||(5993983-5994148)
chr8 (207-254)||(6443596-6443643)
chr8 (181-211)||(5994151-5994181)
chr8 (131-192)||(6443498-6443560)
[»] scaffold0005 (1 HSPs)
scaffold0005 (3-211)||(250631-250844)
[»] chr3 (5 HSPs)
chr3 (77-211)||(43275385-43275521)
chr3 (112-211)||(893491-893590)
chr3 (62-207)||(18270266-18270413)
chr3 (164-208)||(3576867-3576911)
chr3 (105-193)||(3364057-3364146)
[»] scaffold0341 (1 HSPs)
scaffold0341 (105-183)||(6007-6086)
[»] scaffold0009 (1 HSPs)
scaffold0009 (105-185)||(53927-54008)


Alignment Details
Target: chr5 (Bit Score: 198; Significance: 1e-108; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 254
Target Start/End: Original strand, 6989198 - 6989451
Alignment:
Q  1 aacacaaggagtgctaggctagaactcttacggtagcaaaaaacaaaggatgatgggaagtctccaatgaaaaactcatacactagtgaaaataaagaaa 100  Q
    |||| ||||||||||||| ||||  |||||| ||||||| |||||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||    
T  6989198 aacataaggagtgctaggttagaggtcttacagtagcaacaaacaaaggatgatgggaagtccccaatgaaaaactcatacacctgtgaaaataaagaaa 6989297  T
Q  101 atccaaaaacctataggaaacgcctcctaacaaagggctatcttcgaaatcaataaatagaaacaccaaaacaaagctaacaccacgatcaacgaaacaa 200  Q
    |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  6989298 atccaaaaacctataggaaacgtctcctaacaaagggctatctccgaaatcaataaatagaaacacaaaaacaaagctaacaccacgatcaacgaaacaa 6989397  T
Q  201 cataaacaaaatcctcaagcatcatcacaactgccacaaaagcaacttctacca 254  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  6989398 cataaacaaaatcctcaagcatcgtcacaactgccacaaaaacaacttctacca 6989451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 26 - 254
Target Start/End: Original strand, 21600582 - 21600811
Alignment:
Q  26 tcttacggtagcaaaaaacaaaggatgatgggaagtctccaatgaaaaactcatacactagtgaaaataaagaaaa-tccaaaaacctataggaaacgcc 124  Q
    |||||| ||||||| ||||||| |||||||||||| | |||||| ||||| |||||||  |||||||||||||||| ||||||||||||||||||||| |    
T  21600582 tcttaccgtagcaacaaacaaatgatgatgggaagcccccaatggaaaacccatacacccgtgaaaataaagaaaaatccaaaaacctataggaaacgtc 21600681  T
Q  125 tcctaacaaagggctatcttcgaaatcaataaatagaaacaccaaaacaaagctaacaccacgatcaacgaaacaacataaacaaaatcctcaagcatca 224  Q
    |||||||||||| |||| |  | ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||     
T  21600682 tcctaacaaaggactatatctggaatcaataaatagaaacaccaaaacaaagctaacatcacgaacaacgaaacaacataaacaaaatcctcaaacatcg 21600781  T
Q  225 tcacaactgccacaaaagcaacttctacca 254  Q
    ||||||||||||||||| ||||||||||||    
T  21600782 tcacaactgccacaaaaacaacttctacca 21600811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 107 - 254
Target Start/End: Complemental strand, 1157864 - 1157717
Alignment:
Q  107 aaacctataggaaacgcctcctaacaaagggctatcttcgaaatcaataaatagaaacaccaaaacaaagctaacaccacgatcaacgaaacaacataaa 206  Q
    ||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1157864 aaacctataagaaacgcctcctaacaaatggctatctccgaaatcaataaatagaaacaccaaaacaaagctaacaccacgatcaacgaaacaacataaa 1157765  T
Q  207 caaaatcctcaagcatcatcacaactgccacaaaagcaacttctacca 254  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  1157764 caaaatcctcaagcatcgtcacaactgccacaaaaacaacttctacca 1157717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 27 - 227
Target Start/End: Complemental strand, 41356238 - 41356037
Alignment:
Q  27 cttacggtagcaaaaaacaaaggatgatgggaagtctccaatgaaaaactcatacactagtgaaaataaagaaaa-tccaaaaacctataggaaacgcct 125  Q
    ||||| ||||||| |||||||||||||  | ||  | |||||| ||||| |||| ||   ||||||||||||||| |||||||||||||||| ||| |||    
T  41356238 cttacagtagcaacaaacaaaggatgagagaaaacccccaatggaaaacacataaacccatgaaaataaagaaaaatccaaaaacctataggtaacacct 41356139  T
Q  126 cctaacaaagggctatcttcgaaatcaataaatagaaacaccaaaacaaagctaacaccacgatcaacgaaacaacataaacaaaatcctcaagcatcat 225  Q
    ||||||||||| |||||| | |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  41356138 cctaacaaaggactatctccaaaatcaataaatagaaacactaaaacaaagctaacaccacgatcaacgaaacaacataaacaaaatccccaagcatcat 41356039  T
Q  226 ca 227  Q
    ||    
T  41356038 ca 41356037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 98 - 248
Target Start/End: Original strand, 18696464 - 18696617
Alignment:
Q  98 aaaatccaaaaacctataggaaacgcctcctaacaaa---gggctatcttcgaaatcaataaatagaaacaccaaaacaaagctaacaccacgatcaacg 194  Q
    ||||| |||||| ||||| |||||||||||||| |||   ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |    
T  18696464 aaaattcaaaaaactataagaaacgcctcctaataaatgagggctatctccgaaatcaataaatagaaacaccaaaacaaagctaacaccatgatcaaag 18696563  T
Q  195 aaacaacataaacaaaatcctcaagcatcatcacaactgccacaaaagcaactt 248  Q
    ||||||||||||||||||||||||||||| || |||||||||||| | ||||||    
T  18696564 aaacaacataaacaaaatcctcaagcatcgtcgcaactgccacaataacaactt 18696617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 105 - 211
Target Start/End: Complemental strand, 27170768 - 27170662
Alignment:
Q  105 aaaaacctataggaaacgcctcctaacaaagggctatcttcgaaatcaataaatagaaacaccaaaacaaagctaacaccacgatcaacgaaacaacata 204  Q
    |||||||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  27170768 aaaaacctataggaaacgcctcctaacaaatggctatctccgaaaccaataaatagaaacaccaaaacaaagctaacaccacgatcaatgaaacaacata 27170669  T
Q  205 aacaaaa 211  Q
    |||||||    
T  27170668 aacaaaa 27170662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 105 - 211
Target Start/End: Complemental strand, 7767685 - 7767579
Alignment:
Q  105 aaaaacctataggaaacgcctcctaacaaagggctatcttcgaaatcaataaatagaaacaccaaaacaaagctaacaccacgatcaacgaaacaacata 204  Q
    ||||||||||||||||||||||||||||||||| ||||| | ||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  7767685 aaaaacctataggaaacgcctcctaacaaagggttatctccaaaatcaataaatataaacaccaaaacaaagctaacaccacgatcaacggaacaacata 7767586  T
Q  205 aacaaaa 211  Q
    |||||||    
T  7767585 aacaaaa 7767579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 3 - 208
Target Start/End: Original strand, 7270014 - 7270224
Alignment:
Q  3 cacaaggagtgctaggctagaactcttacggtagcaaaaaacaaaggat-gatgggaagtctccaatgaaaaactcatacactagtgaa---aataaaga 98  Q
    |||||||| ||||||||||| | |||||  ||||||| | ||||||||| ||| || |||| |||||| |||| ||||||||  |||||   || ||| |    
T  7270014 cacaaggaatgctaggctaggagtcttaaagtagcaacatacaaaggatagatagggagtccccaatggaaaattcatacacccgtgaatcgaagaaa-a 7270112  T
Q  99 aaatccaaaa--acctataggaaacgcctcctaacaaagggctatcttcgaaatcaataaatagaaacaccaaaacaaagctaacaccacgatcaacgaa 196  Q
    ||||||||||  |||||||||||||||  ||||||||||||||| ||  ||||||||| ||||||||||||||||| ||||||||| |||||||||||||    
T  7270113 aaatccaaaaaaacctataggaaacgcaacctaacaaagggctaactctgaaatcaattaatagaaacaccaaaaccaagctaacagcacgatcaacgaa 7270212  T
Q  197 acaacataaaca 208  Q
    ||||||||||||    
T  7270213 acaacataaaca 7270224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 98 - 211
Target Start/End: Original strand, 1377684 - 1377799
Alignment:
Q  98 aaaatccaaaaacctataggaaa--cgcctcctaacaaagggctatcttcgaaatcaataaatagaaacaccaaaacaaagctaacaccacgatcaacga 195  Q
    |||||||||||| ||||||||||  ||||||||||||||||  ||||| |||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  1377684 aaaatccaaaaaactataggaaaaacgcctcctaacaaaggattatctccgaaattaataaatagaaacaccaaaacaaaactaacaccacgatcaacga 1377783  T
Q  196 aacaacataaacaaaa 211  Q
    |||||||||| |||||    
T  1377784 aacaacataatcaaaa 1377799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 98 - 208
Target Start/End: Original strand, 26656188 - 26656299
Alignment:
Q  98 aaaatcca-aaaacctataggaaacgcctcctaacaaagggctatcttcgaaatcaataaatagaaacaccaaaacaaagctaacaccacgatcaacgaa 196  Q
    |||||||| ||||||||||||||||||||||||||||||| ||| || |||||||||| ||||||||||||||||| || |||||| |||||||||||||    
T  26656188 aaaatccataaaacctataggaaacgcctcctaacaaaggactaactccgaaatcaattaatagaaacaccaaaaccaaactaacaacacgatcaacgaa 26656287  T
Q  197 acaacataaaca 208  Q
    ||||||||||||    
T  26656288 acaacataaaca 26656299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 98 - 208
Target Start/End: Original strand, 26927775 - 26927886
Alignment:
Q  98 aaaatcca-aaaacctataggaaacgcctcctaacaaagggctatcttcgaaatcaataaatagaaacaccaaaacaaagctaacaccacgatcaacgaa 196  Q
    |||||||| ||||||||||||||||||||||||||||||| ||| || |||||||||| ||||||||||||||||| || |||||| |||||||||||||    
T  26927775 aaaatccataaaacctataggaaacgcctcctaacaaaggactaactccgaaatcaattaatagaaacaccaaaaccaaactaacaacacgatcaacgaa 26927874  T
Q  197 acaacataaaca 208  Q
    ||||||||||||    
T  26927875 acaacataaaca 26927886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 3 - 177
Target Start/End: Complemental strand, 38959346 - 38959174
Alignment:
Q  3 cacaaggagtgctaggctagaactcttacggtagcaaaaaacaaaggatgatgggaagtctccaatgaaaaactcatacactagtgaaaataaagaaaa- 101  Q
    |||||||||||||||||||  | |||||| ||||||| |||||||| ||||||  ||  | ||| || ||||| ||| |||  |||||| |||||||||     
T  38959346 cacaaggagtgctaggctaagagtcttacagtagcaacaaacaaagtatgatgaaaaacc-ccattggaaaacccatgcacccgtgaaa-taaagaaaaa 38959249  T
Q  102 tccaaaaacctataggaaacgcctcctaacaaagggctatcttcgaaatcaataaatagaaacaccaaaacaaagc 177  Q
    || ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  38959248 tcgaaaaacctataggaaacgcctcctaacaaagggctatctccg-aatcaataaatagaaacaccaaaacaaagc 38959174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 105 - 208
Target Start/End: Complemental strand, 6030980 - 6030877
Alignment:
Q  105 aaaaacctataggaaacgcctcctaacaaagggctatcttcgaaatcaataaatagaaacaccaaaacaaagctaacaccacgatcaacgaaacaacata 204  Q
    |||||| |||||||||||||||||| |||||||| ||||  ||||||||| ||||||||||||||||| || |||||| |||||||||||||||||||||    
T  6030980 aaaaacttataggaaacgcctcctagcaaagggccatctctgaaatcaattaatagaaacaccaaaaccaatctaacagcacgatcaacgaaacaacata 6030881  T
Q  205 aaca 208  Q
    ||||    
T  6030880 aaca 6030877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 169 - 254
Target Start/End: Complemental strand, 38958723 - 38958638
Alignment:
Q  169 aaacaaagctaacaccacgatcaacgaaacaacataaacaaaatcctcaagcatcatcacaactgccacaaaagcaacttctacca 254  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||||||||| |||| |||| ||||||| ||||||||||||    
T  38958723 aaacaaagctaacaacatgatcaacgaaacaacataaacaaaatcctcaagcatcgtcactactgacacaaaaacaacttctacca 38958638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 74
Target Start/End: Complemental strand, 1157928 - 1157868
Alignment:
Q  14 ctaggctagaactcttacggtagcaaaaaacaaaggatgatgggaagtctccaatgaaaaa 74  Q
    ||||||||| | |||||| ||||||| ||| |||||||||||||||| | |||||||||||    
T  1157928 ctaggctaggagtcttacagtagcaacaaataaaggatgatgggaagcccccaatgaaaaa 1157868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 189; Significance: 1e-102; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 3 - 254
Target Start/End: Complemental strand, 17282687 - 17282435
Alignment:
Q  3 cacaaggagtgctaggctagaactcttacggtagcaaaaaacaaaggatgatgggaagtctccaatgaaaaactcatacactagtgaaaataaagaaaa- 101  Q
    ||||| |||||||||||||| | |||||||||||||| |||||||||||||||||||| | |||||| |||||||||||||  ||||||||||||||||     
T  17282687 cacaaagagtgctaggctaggagtcttacggtagcaacaaacaaaggatgatgggaagcccccaatgtaaaactcatacacccgtgaaaataaagaaaaa 17282588  T
Q  102 tccaaaaacctataggaaacgcctcctaacaaagggctatcttcgaaatcaataaatagaaacaccaaaacaaagctaacaccacgatcaacgaaacaac 201  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  17282587 tccaaaaacctataggaaacgcctcctaacaaagggctatctccgaaatcaataaatagaaacaccaaaataaatctaacaccacgatcaacgaaacaac 17282488  T
Q  202 ataaacaaaatcctcaagcatcatcacaactgccacaaaagcaacttctacca 254  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  17282487 ataaacaaaatcctcaagcatcgtcacaactgccacaaaaacaacttctacca 17282435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 3 - 254
Target Start/End: Complemental strand, 1552335 - 1552084
Alignment:
Q  3 cacaaggagtgctaggctagaactcttacggtagcaaaaaacaaaggatgatgggaagtctccaatgaaaaactcatacactagtgaaaataaagaaaa- 101  Q
    |||||||||||||||||||  | |||||| ||||||| |||||||||||| |||||||   |||||||||| | |||||||   |||||||||||||||     
T  1552335 cacaaggagtgctaggctaagagtcttacagtagcaacaaacaaaggatggtgggaagctcccaatgaaaacc-catacacccatgaaaataaagaaaaa 1552237  T
Q  102 tccaaaaacctataggaaacgcctcctaacaaagggctatcttcgaaatcaataaatagaaacaccaaaacaaagctaacaccacgatcaacgaaacaac 201  Q
    | |||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  1552236 ttcaaaaatctataagaaacgcctcctaacaaagggctatctccgaaatcaataaatagaaacaccaaaacatagctaacaccacgatcaacaaaacaac 1552137  T
Q  202 ataaacaaaatcctcaagcatcatcacaactgccacaaaagcaacttctacca 254  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  1552136 ataaacaaaatcctcaagcatcgtcacaactgccacaaaaacaacttctacca 1552084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 3 - 254
Target Start/End: Original strand, 3920968 - 3921219
Alignment:
Q  3 cacaaggagtgctaggctagaactcttacggtagcaaaaaacaaaggatgatgggaagtctccaatgaaaaactcatacactagtgaaaataaagaaaa- 101  Q
    |||||||||||||| | ||| | |||||| ||||||| ||||||| |||||||| ||  | |||||||||| | |||||||  ||||||||||||||||     
T  3920968 cacaaggagtgctaagttaggagtcttacagtagcaacaaacaaatgatgatggaaaacccccaatgaaaacc-catacacctgtgaaaataaagaaaaa 3921066  T
Q  102 tccaaaaacctataggaaacgcctcctaacaaagggctatcttcgaaatcaataaatagaaacaccaaaacaaagctaacaccacgatcaacgaaacaac 201  Q
    | |||||| |||||  |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  3921067 ttcaaaaatctataataaacgcctcctaacaaagggctatctccgaaatcaataaatagaaacatcaaaacatagctaacaccacgatcaacgaaacaac 3921166  T
Q  202 ataaacaaaatcctcaagcatcatcacaactgccacaaaagcaacttctacca 254  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  3921167 ataaacaaaatcctcaagcatcgtcacaactgccacaaaaacaacttctacca 3921219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 3 - 254
Target Start/End: Original strand, 1894785 - 1895030
Alignment:
Q  3 cacaaggagtgctaggctagaactcttacggtagcaaaaaacaaaggatgatgggaagtctccaatgaaaaactcatacactagtgaaaataaagaaaa- 101  Q
    ||||||||||| |||||||| | |||||||||||||| |||||||||||||||||||        || | ||  |||||||  ||||||||||||||||     
T  1894785 cacaaggagtgttaggctaggagtcttacggtagcaacaaacaaaggatgatgggaa--------tggagaatccatacacccgtgaaaataaagaaaaa 1894876  T
Q  102 tccaaaaacctataggaaacgcctcctaacaaagggctatcttcgaaatcaataaatagaaacaccaaaacaaagctaacaccacgatcaacgaaacaac 201  Q
    ||||||||| ||||| ||||| |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  1894877 tccaaaaacttatagaaaacgtctcctaacaaagagctatcttcgaaatcaataaatagaaacatcaaaacaaagctaacaccacgttcaacgaaacaac 1894976  T
Q  202 at-aaacaaaatcctcaagcatcatcacaactgccacaaaagcaacttctacca 254  Q
    || ||| |||||||||||||||| ||||||||||||||||| ||||||||||||    
T  1894977 ataaaaaaaaatcctcaagcatcgtcacaactgccacaaaaacaacttctacca 1895030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 66 - 211
Target Start/End: Original strand, 17374738 - 17374885
Alignment:
Q  66 aatgaaaaactcatacactagtgaaaataa-agaaaatccaaaa-acctataggaaacgcctcctaacaaagggctatcttcgaaatcaataaatagaaa 163  Q
    ||||||||||||||||||  |||||   || | ||||||||||| |||||||||||||||||||||| | |||||||||| |||||||||||||||||||    
T  17374738 aatgaaaaactcatacacccgtgaatcaaagaaaaaatccaaaaaacctataggaaacgcctcctaagagagggctatctccgaaatcaataaatagaaa 17374837  T
Q  164 caccaaaacaaagctaacaccacgatcaacgaaacaacataaacaaaa 211  Q
     | |||||||||||||||||||||||||||||||||||||||||||||    
T  17374838 aatcaaaacaaagctaacaccacgatcaacgaaacaacataaacaaaa 17374885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 63 - 211
Target Start/End: Complemental strand, 11163736 - 11163591
Alignment:
Q  63 tccaatgaaaaactcatacactagtgaaaataaagaaaatccaaaaacctataggaaacgcctcctaacaaagggctatcttcgaaatcaataaatagaa 162  Q
    |||||||||||||||||||||  ||||| | ||| ||||   |||||| ||||| |||| ||||||||||||||||||| | | ||||||||||||||||    
T  11163736 tccaatgaaaaactcatacacccgtgaataaaaaaaaaaaaaaaaaacttatagaaaacacctcctaacaaagggctatatccaaaatcaataaatagaa 11163637  T
Q  163 acaccaaaacaaagctaacaccacgatcaacgaaacaacataaacaaaa 211  Q
    | ||||||||||||||||||||   |||||||| |||||||||||||||    
T  11163636 ataccaaaacaaagctaacacc---atcaacgacacaacataaacaaaa 11163591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 105 - 208
Target Start/End: Original strand, 4869095 - 4869198
Alignment:
Q  105 aaaaacctataggaaacgcctcctaacaaagggctatcttcgaaatcaataaatagaaacaccaaaacaaagctaacaccacgatcaacgaaacaacata 204  Q
    ||||||||||||||||||||||||| |||||||| ||||  ||||||||| ||||||||||||||||| |||||||||   |||||||||||||||||||    
T  4869095 aaaaacctataggaaacgcctcctagcaaagggccatctctgaaatcaattaatagaaacaccaaaaccaagctaacagggcgatcaacgaaacaacata 4869194  T
Q  205 aaca 208  Q
    ||||    
T  4869195 aaca 4869198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 208
Target Start/End: Original strand, 34659786 - 34659820
Alignment:
Q  174 aagctaacaccacgatcaacgaaacaacataaaca 208  Q
    ||||||||| |||||||||||||||||||||||||    
T  34659786 aagctaacaacacgatcaacgaaacaacataaaca 34659820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 153
Target Start/End: Original strand, 34659739 - 34659787
Alignment:
Q  105 aaaaacctataggaaacgcctcctaacaaagggctatcttcgaaatcaa 153  Q
    |||||| ||||||||||||||||||||||||| ||| ||  ||||||||    
T  34659739 aaaaacatataggaaacgcctcctaacaaaggactaactctgaaatcaa 34659787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 149; Significance: 9e-79; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 149; E-Value: 9e-79
Query Start/End: Original strand, 3 - 254
Target Start/End: Original strand, 53201626 - 53201877
Alignment:
Q  3 cacaaggagtgctaggctagaactcttacggtagcaaaaaacaaaggatgatgggaagtctccaatgaaaaactcatacactagtgaaaataaagaaaa- 101  Q
    |||||||| || |||||||| | |||||| ||| ||| |||||||||||||||| ||  | |||||| ||||  |||||||  ||||||||||| ||||     
T  53201626 cacaaggaatgttaggctaggagtcttacagtaacaataaacaaaggatgatggaaaccc-ccaatggaaaatccatacacccgtgaaaataaataaaaa 53201724  T
Q  102 tccaaaaacctataggaaacgcctcctaacaaagggctatcttcgaaatcaataaatagaaacaccaaaacaaagctaacaccacgatcaacgaaacaac 201  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  53201725 tccaaaaacctataggaaacacctcctaacaaagggctatctccgaaatcaataaatagaaacaccaaaacaaagctaacatcacgatcaacaaaacaac 53201824  T
Q  202 ataaacaaaatcctcaagcatcatcacaactgccacaaaagcaacttctacca 254  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  53201825 ataaacaaaatcctcaagcatcgtcacaactgccacaaaaacaacttctacca 53201877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 77 - 254
Target Start/End: Complemental strand, 34227668 - 34227490
Alignment:
Q  77 catacactagtgaaaataaagaaaa-tccaaaaacctataggaaacgcctcctaacaaagggctatcttcgaaatcaataaatagaaacaccaaaacaaa 175  Q
    |||||||  |||||||||||||||| |||||||||||||||||| | |||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  34227668 catacacccgtgaaaataaagaaaaatccaaaaacctataggaatcacctcttaacaaagggctatctccgaaatcaataaatagaaacaccaaaacaaa 34227569  T
Q  176 gctaacaccacgatcaacgaaacaacataaacaaaatcctcaagcatcatcacaactgccacaaaagcaacttctacca 254  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  34227568 gctaacaccacgatcaacgaaacaacataaacaaaatcctcaagcatcgtcacaactgccacaaaaacaacttctacca 34227490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 3 - 254
Target Start/End: Complemental strand, 47519197 - 47518948
Alignment:
Q  3 cacaaggagtgctaggctagaactcttacggtagcaaaaaacaaaggatgatgggaagtctccaatgaaaaactcatacactagtgaaaataaagaaaa- 101  Q
    ||||||||||| |||| ||  | ||||||  |||||| |||||||||||||||||||| | |||||| ||||| |||||||    || |||||||||||     
T  47519197 cacaaggagtgttaggttaagagtcttacactagcaacaaacaaaggatgatgggaagcccccaatggaaaacccatacacccacgagaataaagaaaaa 47519098  T
Q  102 tccaaaaacctataggaaacgcctcctaacaaagggctatcttcgaaatcaataaatagaaacaccaaaacaaagctaacaccacgatcaacgaaacaac 201  Q
    ||||||||||||| ||||| |||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| |||||||||   |||    
T  47519097 tccaaaaacctattggaaatgcctcctaacaaagggctatctccgaaatcaataaatcgaaacaccaaaacaaagctaacaccaggatcaacga---aac 47519001  T
Q  202 ataaacaaaatcctcaagcatcatcacaactgccacaaaagcaacttctacca 254  Q
    ||| |||||| |||||||||||  |||||||||||||||| ||||||||||||    
T  47519000 atatacaaaaacctcaagcatcgccacaactgccacaaaaacaacttctacca 47518948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 3 - 254
Target Start/End: Complemental strand, 31360811 - 31360559
Alignment:
Q  3 cacaaggagtgctaggctagaactcttacggtagcaaaaaacaaaggatgatgggaagtctccaatgaaaaactcatacactagtgaaaataaagaaaa- 101  Q
    ||||||||||| ||||| |||| |||||  ||||||| | ||||| |||||||||||| | |||||||||||| |||||||  ||||||||| ||||||     
T  31360811 cacaaggagtgttaggccagaagtcttatagtagcaacacacaaatgatgatgggaagcccccaatgaaaaacccatacacccgtgaaaatatagaaaaa 31360712  T
Q  102 tccaaaaacctataggaaacgcctcctaacaaagggctatcttcgaaatcaataaatagaaacaccaaaacaaagctaacaccacgatcaacgaaacaac 201  Q
    ||||||||||||||  ||||| |||||||||||  ||||| | | |||||||||||||||||||| |||||||| |||||| |||||||||||| |||||    
T  31360711 tccaaaaacctataaaaaacgtctcctaacaaaatgctatttccaaaatcaataaatagaaacactaaaacaaaactaacatcacgatcaacgacacaac 31360612  T
Q  202 ataaacaaaatcctcaagcatcatcacaactgccacaaaagcaacttctacca 254  Q
    |||||||||||| |||| |||| |||||| | |||||||| ||||||||||||    
T  31360611 ataaacaaaatcttcaaacatcgtcacaattaccacaaaaacaacttctacca 31360559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 3 - 211
Target Start/End: Complemental strand, 14566744 - 14566531
Alignment:
Q  3 cacaaggagtgctaggctagaactcttacggtagcaaaaaacaaaggat-gatgggaagtctccaatgaaaaactcatacactagtgaa---aataaaga 98  Q
    |||||||||||||||| ||| | |||||   |||||| | ||||| ||| |||||| || | |||||| ||| |||||||||  |||||   || ||| |    
T  14566744 cacaaggagtgctaggttaggagtcttaaaatagcaacatacaaatgatagatggggagcccccaatggaaacctcatacacccgtgaatcaaagaaaaa 14566645  T
Q  99 aaatccaaaaacc-tataggaaacgcctcctaacaaagggctatcttcgaaatcaataaatagaaacaccaaaacaaagctaacaccacgatcaacgaaa 197  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||||||| | | ||||||||||||||||||||||||||    
T  14566644 aaatccaaaaaccctataggaaacgcctcctaacaaagggctatctccgaaatcagtaaatagaaacacaagaccaaagctaacaccacgatcaacgaaa 14566545  T
Q  198 caacataaacaaaa 211  Q
    ||||||||||||||    
T  14566544 caacataaacaaaa 14566531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 98 - 211
Target Start/End: Complemental strand, 23054937 - 23054823
Alignment:
Q  98 aaaatcca-aaaacctataggaaacgcctcctaacaaagggctatcttcgaaatcaataaatagaaacaccaaaacaaagctaacaccacgatcaacgaa 196  Q
    |||||||| ||||||||||| |||| ||||||||||||||  ||||| | ||| | |||||||||||||| |||||||||||||||||||||||||||||    
T  23054937 aaaatccataaaacctatagaaaacacctcctaacaaaggattatctccaaaaactataaatagaaacactaaaacaaagctaacaccacgatcaacgaa 23054838  T
Q  197 acaacataaacaaaa 211  Q
    |||||||||||||||    
T  23054837 acaacataaacaaaa 23054823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 127 - 192
Target Start/End: Original strand, 6409488 - 6409554
Alignment:
Q  127 ctaacaaagggctatcttcgaaatcaataaatagaaacacc-aaaacaaagctaacaccacgatcaa 192  Q
    |||||||||||||||||||||||| ||||||   ||||||| ||||||||||||||||||| |||||    
T  6409488 ctaacaaagggctatcttcgaaataaataaaagaaaacaccaaaaacaaagctaacaccacaatcaa 6409554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 54230195 - 54230255
Alignment:
Q  126 cctaacaaagggctatcttcgaaatcaataaatagaaacacc-aaaacaaagctaacacca 185  Q
    |||||||||||||||| ||| |||||||||||  |||||||| ||||||||||||||||||    
T  54230195 cctaacaaagggctatattctaaatcaataaaaggaaacaccaaaaacaaagctaacacca 54230255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 207 - 254
Target Start/End: Original strand, 6409594 - 6409641
Alignment:
Q  207 caaaatcctcaagcatcatcacaactgccacaaaagcaacttctacca 254  Q
    |||||||||||| |||||||||||||||||||||| ||||||| ||||    
T  6409594 caaaatcctcaaacatcatcacaactgccacaaaaacaacttccacca 6409641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 192
Target Start/End: Complemental strand, 24958248 - 24958162
Alignment:
Q  106 aaaacctataggaaacgcctcctaacaaagggctatcttcgaaatcaataaatagaaacacc-aaaacaaagctaacaccacgatcaa 192  Q
    |||| |||||| |||| || |||||||||| ||||||| | |||||||||||  |||||||| ||||||||||||||||||| |||||    
T  24958248 aaaatctatagaaaacaccacctaacaaagagctatctccaaaatcaataaa-ggaaacaccaaaaacaaagctaacaccacaatcaa 24958162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 129; Significance: 8e-67; HSPs: 8)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 3 - 254
Target Start/End: Original strand, 25790998 - 25791249
Alignment:
Q  3 cacaaggagtgctaggctagaactcttacggtagcaaaaaacaaaggatgatgggaagtctccaatgaaaaactcatacactagtgaaaataaagaaaa- 101  Q
    |||||||||||| ||| ||| | ||||| | | |||| ||||||| |||||||| ||  |  ||||| ||||| |||||||  ||||||||||||||||     
T  25790998 cacaaggagtgccaggttaggagtcttaagtt-gcaacaaacaaatgatgatggaaaaccctcaatggaaaacccatacacccgtgaaaataaagaaaaa 25791096  T
Q  102 tccaaaaacctataggaaacgcctcctaacaaagggctatcttcgaaatcaataaatagaaacaccaaaacaaagctaacaccacgatcaacgaaacaac 201  Q
    ||||||||||||||||| | | ||||||||| |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  25791097 tccaaaaacctataggatatgtctcctaacatagggctatctccgaaatcaataaatagaaacatcaaaacaaagctaacaccacgatcaatgaaacaac 25791196  T
Q  202 ataaacaaaatcctcaagcatcatcacaactgccacaaaagcaacttctacca 254  Q
    |||||||||||||||||||||| ||||||||| ||||||| ||||||||||||    
T  25791197 ataaacaaaatcctcaagcatcgtcacaactgtcacaaaaacaacttctacca 25791249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 160 - 254
Target Start/End: Original strand, 34117577 - 34117671
Alignment:
Q  160 gaaacaccaaaacaaagctaacaccacgatcaacgaaacaacataaacaaaatcctcaagcatcatcacaactgccacaaaagcaacttctacca 254  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||| ||||||| ||||    
T  34117577 gaaacaccaaaacaaagctaacaccacgatcaacgaaacaacataaacaaaatcctcaagcatcgttgcaactgccacaaaaacaacttccacca 34117671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 105 - 211
Target Start/End: Complemental strand, 39709657 - 39709551
Alignment:
Q  105 aaaaacctataggaaacgcctcctaacaaagggctatcttcgaaatcaataaatagaaacaccaaaacaaagctaacaccacgatcaacgaaacaacata 204  Q
    ||||||||| | ||||||| ||||||||||||| | ||   |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  39709657 aaaaacctaaaagaaacgcttcctaacaaagggttgtccctgaaaccaataaatagaaacaccaaaacaaagctaacaccacgatcaacgaaacaacaaa 39709558  T
Q  205 aacaaaa 211  Q
    |||||||    
T  39709557 aacaaaa 39709551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 105 - 208
Target Start/End: Original strand, 615207 - 615310
Alignment:
Q  105 aaaaacctataggaaacgcctcctaacaaagggctatcttcgaaatcaataaatagaaacaccaaaacaaagctaacaccacgatcaacgaaacaacata 204  Q
    ||||| |||||||||| |||||||| ||||||| ||| |  ||||||||| ||||||||||||||||| ||||||||| |||||||||| ||||||||||    
T  615207 aaaaaactataggaaatgcctcctagcaaagggttatatctgaaatcaattaatagaaacaccaaaaccaagctaacagcacgatcaacaaaacaacata 615306  T
Q  205 aaca 208  Q
    ||||    
T  615307 aaca 615310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 4 - 177
Target Start/End: Original strand, 34653251 - 34653429
Alignment:
Q  4 acaaggagtgctaggctagaactcttacggtagcaaaaaacaaaggat-gatgggaagtctccaatgaaaaactcatacactagtgaa---aataaagaa 99  Q
    ||||||||||||| ||| ||| |||||   ||| || ||||||||||| |||| | ||||  |||||||||||||||||||  |||||   || ||| ||    
T  34653251 acaaggagtgctacgcttgaagtcttaaaatagtaacaaacaaaggatagatgaggagtcctcaatgaaaaactcatacacccgtgaatcaaagaaaaaa 34653350  T
Q  100 aatccaaaaac-ctataggaaacgcctcctaacaaagggctatcttcgaaatcaataaatagaaacaccaaaacaaagc 177  Q
    ||||||||||  ||||||||||| ||||||||||||||| ||| | |||||||||| | | ||||||||||||||||||    
T  34653351 aatccaaaaaaactataggaaacacctcctaacaaagggttatatccgaaatcaatgagtggaaacaccaaaacaaagc 34653429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 112 - 192
Target Start/End: Complemental strand, 11408436 - 11408355
Alignment:
Q  112 tataggaaacgcctcctaacaaagggctatcttcgaaatcaataaatagaaacacc-aaaacaaagctaacaccacgatcaa 192  Q
    ||||| |||| || |||||||||| ||||||| |||||||||||||  |||||||| ||||||||||||||||||| |||||    
T  11408436 tatagaaaacaccacctaacaaagagctatctccgaaatcaataaaaggaaacaccaaaaacaaagctaacaccacaatcaa 11408355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 166 - 211
Target Start/End: Original strand, 34654463 - 34654508
Alignment:
Q  166 ccaaaacaaagctaacaccacgatcaacgaaacaacataaacaaaa 211  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||    
T  34654463 ccaaaacaaagctaacatcacgatcaacgaaacaacataaacaaaa 34654508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 105 - 183
Target Start/End: Complemental strand, 6504403 - 6504324
Alignment:
Q  105 aaaaacctataggaaacgcctcctaacaaagggctatcttcgaaatcaataaatagaaacacc-aaaacaaagctaacac 183  Q
    |||||| |||| ||||| | ||||||||||||| |||||||||||||||||||   ||||||| ||||||||||||||||    
T  6504403 aaaaacttataagaaacacatcctaacaaagggttatcttcgaaatcaataaaagaaaacaccaaaaacaaagctaacac 6504324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 125; Significance: 2e-64; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 3 - 254
Target Start/End: Complemental strand, 11699091 - 11698840
Alignment:
Q  3 cacaaggagtgctaggctagaactcttacggtagcaaaaaacaaaggatgatgggaagtctccaatgaaaaactcatacactagtgaaaataaagaaaa- 101  Q
    |||||||||||||||| ||  | |||||  ||||||| |||||||||||||| | ||| | | |||  ||||| |||||||  ||||||||||||||||     
T  11699091 cacaaggagtgctaggttaagagtcttatagtagcaacaaacaaaggatgatag-aagccccaaatagaaaacccatacacccgtgaaaataaagaaaaa 11698993  T
Q  102 tccaaaaacctataggaaacgcctcctaacaaagggctatcttcgaaatcaataaatagaaacaccaaaacaaagctaacaccacgatcaacgaaacaac 201  Q
    |||||||||| ||||||||  |||||||||||||||| |||| |||||||||||||||||||||||||||||| || |||||| ||| ||||||||||||    
T  11698992 tccaaaaaccgataggaaatacctcctaacaaagggccatctccgaaatcaataaatagaaacaccaaaacaatgcgaacacctcgagcaacgaaacaac 11698893  T
Q  202 ataaacaaaatcctcaagcatcatcacaactgccacaaaagcaacttctacca 254  Q
    |||||||||||| ||||||||| ||||||||||||||||| ||||||||||||    
T  11698892 ataaacaaaatcatcaagcatcgtcacaactgccacaaaaacaacttctacca 11698840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 112 - 210
Target Start/End: Original strand, 29550068 - 29550166
Alignment:
Q  112 tataggaaacgcctcctaacaaagggctatcttcgaaatcaataaatagaaacaccaaaacaaagctaacaccacgatcaacgaaacaacataaacaaa 210  Q
    ||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  29550068 tatagaaaacgcctcataacaaagggctatctccgaaatcaataaatagaaacaccaaaataaagctaacaccacgatcaacgaaacaacataaacaaa 29550166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 105 - 208
Target Start/End: Original strand, 3301892 - 3301996
Alignment:
Q  105 aaaaacctataggaaacgcctcctaa-caaagggctatcttcgaaatcaataaatagaaacaccaaaacaaagctaacaccacgatcaacgaaacaacat 203  Q
    |||||| || |||||||||||||||| |||| ||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3301892 aaaaacttagaggaaacgcctcctaaacaaatggctatctctaaaatcaataaatagaaacaccaaaacaaagctaacaccacgatcaacgaaacaacat 3301991  T
Q  204 aaaca 208  Q
    |||||    
T  3301992 aaaca 3301996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 110 - 211
Target Start/End: Original strand, 1778049 - 1778151
Alignment:
Q  110 cctataggaaacgcctcctaacaaagggctatcttcgaaatcaataaatagaaacaccaaaa-caaagctaacaccacgatcaacgaaacaacataaaca 208  Q
    ||||||||||| ||||| || ||||| | |||||  |||||||||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||    
T  1778049 cctataggaaatgcctcgtatcaaagagttatctctgaaatcaataaatagaaacaccaaaaacaaagttatcaccacgatcaacgaaacaacataaaca 1778148  T
Q  209 aaa 211  Q
    |||    
T  1778149 aaa 1778151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 105 - 211
Target Start/End: Complemental strand, 39020855 - 39020736
Alignment:
Q  105 aaaaacctataggaaacgcctcctaacaaagggctatcttcgaaatcaataaatagaaacaccaaa-------------acaaagctaacaccacgatca 191  Q
    |||||||||| ||||||||||||||||||| | |||| | ||||||||||||||||||||||||||             |||||||||||||||| ||||    
T  39020855 aaaaacctatgggaaacgcctcctaacaaatgactatatccgaaatcaataaatagaaacaccaaaacaatccaccaaaacaaagctaacaccacaatca 39020756  T
Q  192 acgaaacaacataaacaaaa 211  Q
    ||||||||||||||||||||    
T  39020755 acgaaacaacataaacaaaa 39020736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 121; Significance: 5e-62; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 3 - 230
Target Start/End: Original strand, 20739969 - 20740196
Alignment:
Q  3 cacaaggagtgctaggctagaactcttacggtagcaaaaaacaaaggatgatgggaagtctccaatgaaaaactcatacactagtgaaaataaagaaaa- 101  Q
    ||||||||||| || ||||| | |||||| ||||||| |||||||||||| | ||||| | |||||||||| | | |||||   |||||||||||||||     
T  20739969 cacaaggagtgttaagctaggagtcttacagtagcaacaaacaaaggatggttggaagcccccaatgaaaacccc-tacacccatgaaaataaagaaaaa 20740067  T
Q  102 tccaaaaacctataggaaacgcctcctaacaaagggctatcttcgaaatcaataaatagaaacaccaaaacaaagctaacaccacgatcaacgaaacaac 201  Q
    | |||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  20740068 ttcaaaaatctataagaaacgcctcctaacaaagggctatctccgaaatcaataaatagaaacaccaaaatatagctaacaccacgatcaacaaaacaac 20740167  T
Q  202 ataaacaaaatcctcaagcatcatcacaa 230  Q
    |||||||||||||||||||||| ||||||    
T  20740168 ataaacaaaatcctcaagcatcgtcacaa 20740196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 105 - 211
Target Start/End: Complemental strand, 3524213 - 3524106
Alignment:
Q  105 aaaaacctataggaaacgcctcctaacaaagggctatcttcgaaatcaataaatagaaacaccaa-aacaaagctaacaccacgatcaacgaaacaacat 203  Q
    ||||| |||||||||||||||| |||||||||||||||| | ||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||||    
T  3524213 aaaaatctataggaaacgcctcttaacaaagggctatctccaaaatcaataaatagaaacaccaacaacaaagctatcaccatgatcaacgaaacaacat 3524114  T
Q  204 aaacaaaa 211  Q
    ||||||||    
T  3524113 aaacaaaa 3524106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 105 - 211
Target Start/End: Complemental strand, 34214042 - 34213936
Alignment:
Q  105 aaaaacctataggaaacgcctcctaacaaagggctatcttcgaaatcaataaatagaaacaccaaaacaaagctaacaccacgatcaacgaaacaacata 204  Q
    |||||||||||| ||| ||||||||||||||| |||||| ||||| |||||||||| | ||||||||||||| |||||||||||||||| ||||||||||    
T  34214042 aaaaacctatagaaaatgcctcctaacaaaggactatctccgaaaacaataaatagtagcaccaaaacaaagttaacaccacgatcaacaaaacaacata 34213943  T
Q  205 aacaaaa 211  Q
    |||||||    
T  34213942 aacaaaa 34213936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 3 - 134
Target Start/End: Original strand, 1869296 - 1869427
Alignment:
Q  3 cacaaggagtgctaggctagaactcttacggtagcaaaaaacaaaggatgatgggaagtctccaatgaaaaactcatacactagtgaaaataaagaaaa- 101  Q
    |||||||| | ||||||| | | ||||||  |||||| |||||||||||||||||||| | |||||| ||||||||||||    |||||||||||||||     
T  1869296 cacaaggaatactaggctcggagtcttacattagcaacaaacaaaggatgatgggaagcc-ccaatgtaaaactcatacatccctgaaaataaagaaaaa 1869394  T
Q  102 tccaaaaacctataggaaacgcctcctaacaaa 134  Q
    ||||||||||||| |||||||||||||||||||    
T  1869395 tccaaaaacctattggaaacgcctcctaacaaa 1869427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 105 - 211
Target Start/End: Original strand, 21880890 - 21880988
Alignment:
Q  105 aaaaacctataggaaacgcctcctaacaaagggctatcttcgaaatcaataaatagaaacaccaaaacaaagctaacaccacgatcaacgaaacaacata 204  Q
    ||||||||||||||||||||||| ||||||||||||||| | ||| |||        | ||||||||||||||||||||||||||||||||| |||||||    
T  21880890 aaaaacctataggaaacgcctcccaacaaagggctatctccaaaaacaa--------agcaccaaaacaaagctaacaccacgatcaacgaagcaacata 21880981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 207 - 248
Target Start/End: Complemental strand, 3524098 - 3524057
Alignment:
Q  207 caaaatcctcaagcatcatcacaactgccacaaaagcaactt 248  Q
    |||||||||||| |||||||||||||||||||||| ||||||    
T  3524098 caaaatcctcaaacatcatcacaactgccacaaaaacaactt 3524057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 171
Target Start/End: Complemental strand, 11139654 - 11139610
Alignment:
Q  127 ctaacaaagggctatcttcgaaatcaataaatagaaacaccaaaa 171  Q
    ||||||||| ||||| |||||||||||||||  ||||||||||||    
T  11139654 ctaacaaagagctatattcgaaatcaataaaaggaaacaccaaaa 11139610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 98; Significance: 2e-48; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 3 - 211
Target Start/End: Original strand, 20860658 - 20860867
Alignment:
Q  3 cacaaggagtgctaggctagaactcttacggtagcaaaaaacaaaggat-gatgggaagtctccaatgaaaaactcatacactagtgaaaataaagaaaa 101  Q
    ||||||||||| ||||| || | |||||  ||||||| | ||||||||| |||||| ||   |||||| ||||||||||||| ||||||   ||  ||||    
T  20860658 cacaaggagtgttaggcgaggagtcttaaagtagcaacatacaaaggatagatggggagctcccaatggaaaactcatacacaagtgaatcaaagaaaaa 20860757  T
Q  102 tccaaaaacctataggaaacgcctcctaacaaagggctatcttcgaaatcaataaatagaaacaccaaaacaaagctaacaccacgatcaacgaaacaac 201  Q
    |||||||  |||||||||||||||||||| |||||||||||| ||||| |||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  20860758 tccaaaacactataggaaacgcctcctaaaaaagggctatctccgaaaccaataaatagaaacaccaaaacaaagctaacaccgcaatcaacgaaacaac 20860857  T
Q  202 ataaacaaaa 211  Q
    ||||||||||    
T  20860858 ataaacaaaa 20860867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 105 - 211
Target Start/End: Original strand, 10408290 - 10408396
Alignment:
Q  105 aaaaacctataggaaacgcctcctaacaaagggctatcttcgaaatcaataaatagaaacaccaaaacaaagctaacaccacgatcaacgaaacaacata 204  Q
    ||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||| |||| ||||| ||| |||||| ||||||||||    
T  10408290 aaaaacctataggaaacacctcctaacaaagggttatctccgaaatcaataaatagaaacaccaaaataaagttaacatcacaatcaactaaacaacata 10408389  T
Q  205 aacaaaa 211  Q
    |||||||    
T  10408390 aacaaaa 10408396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 164
Target Start/End: Original strand, 5993983 - 5994148
Alignment:
Q  3 cacaaggagtgctaggctagaactcttacggtagcaaaaaacaaaggat-gatgggaagtctccaatgaaaaactcatacactagtgaa--aataaagaa 99  Q
    |||||||||||||||||||| | |||||  ||||||| | ||||||||| |||||| |  |||||||| ||||| |||||||  ||| |  ||  || ||    
T  5993983 cacaaggagtgctaggctaggagtcttaaagtagcaacatacaaaggatagatggggaacctccaatggaaaacccatacacccgtgcatcaaagaaaaa 5994082  T
Q  100 aatccaaaa-acctataggaaacgcctcctaacaaagggctatcttcgaaatcaataaatagaaac 164  Q
    | ||||||| ||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||    
T  5994083 attccaaaaaacctataggaaacgcctcctaacaaagagctatattcgaaatcaatagatagaaac 5994148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 207 - 254
Target Start/End: Original strand, 6443596 - 6443643
Alignment:
Q  207 caaaatcctcaagcatcatcacaactgccacaaaagcaacttctacca 254  Q
    |||||||||||| |||||||||||||||||||||| ||||||| ||||    
T  6443596 caaaatcctcaaacatcatcacaactgccacaaaaacaacttccacca 6443643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 211
Target Start/End: Original strand, 5994151 - 5994181
Alignment:
Q  181 caccacgatcaacgaaacaacataaacaaaa 211  Q
    |||||||||||||||||||||||||||||||    
T  5994151 caccacgatcaacgaaacaacataaacaaaa 5994181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 192
Target Start/End: Original strand, 6443498 - 6443560
Alignment:
Q  131 caaagggctatcttcgaaatcaataaatagaaacacc-aaaacaaagctaacaccacgatcaa 192  Q
    |||||||||||||   |||||||||||  |||||||| ||||||||||||||||||| |||||    
T  6443498 caaagggctatctctaaaatcaataaaaggaaacaccaaaaacaaagctaacaccacaatcaa 6443560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 92; Significance: 9e-45; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 3 - 211
Target Start/End: Original strand, 250631 - 250844
Alignment:
Q  3 cacaaggagtgctaggctagaactcttacggtagcaaaaaacaaaggat-gatgggaagtctccaatgaaaaactcatacactagtgaa---aataaaga 98  Q
    |||||||||||||||| ||| | |||||   |||||| | ||||| ||| |||||| || | |||||| ||| |||||||||  |||||   || ||| |    
T  250631 cacaaggagtgctaggttaggagtcttaaaatagcaacatacaaatgatagatggggagcccccaatggaaacctcatacacccgtgaatcaaagaaaaa 250730  T
Q  99 aaatccaaaaacc-tataggaaacgcctcctaacaaagggctatcttcgaaatcaataaatagaaacaccaaaacaaagctaacaccacgatcaacgaaa 197  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||||||| | | ||||||||||||||||||||||||||    
T  250731 aaatccaaaaaccctataggaaacgcctcctaacaaagggctatctccgaaatcagtaaatagaaacacaagaccaaagctaacaccacgatcaacgaaa 250830  T
Q  198 caacataaacaaaa 211  Q
    ||||||||||||||    
T  250831 caacataaacaaaa 250844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 89; Significance: 6e-43; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 77 - 211
Target Start/End: Original strand, 43275385 - 43275521
Alignment:
Q  77 catacactagtgaa-aataaagaaaatccaaaa-acctataggaaacgcctcctaacaaagggctatcttcgaaatcaataaatagaaacaccaaaacaa 174  Q
    |||||||| ||||| || ||| ||||||||||| |||||||| |||||  ||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  43275385 catacacttgtgaataaaaaaaaaaatccaaaaaacctatagaaaacgtgtcctaacaaagggctatctccgaaatcaataaatagaaacatcaaaacaa 43275484  T
Q  175 agctaacaccacgatcaacgaaacaacataaacaaaa 211  Q
    |||||||||||||||||||||||||||||||||||||    
T  43275485 agctaacaccacgatcaacgaaacaacataaacaaaa 43275521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 112 - 211
Target Start/End: Complemental strand, 893590 - 893491
Alignment:
Q  112 tataggaaacgcctcctaacaaagggctatcttcgaaatcaataaatagaaacaccaaaacaaagctaacaccacgatcaacgaaacaacataaacaaaa 211  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| ||||    
T  893590 tataggaaacgcctcctaacaaagggctatctctgaaatcaataaatagaaacaccaaaacaaagctaacaccacgatcaatgaaaaaacataaataaaa 893491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 62 - 207
Target Start/End: Complemental strand, 18270413 - 18270266
Alignment:
Q  62 ctccaatgaaaaactcatacactagtgaaaataa-agaaaatccaaaaa-cctataggaaacgcctcctaacaaagggctatcttcgaaatcaataaata 159  Q
    |||||||||||||| |||||||  |||||   || | |||||||||||| |||||||||||||||||||| ||||| |||||||  ||||||||| ||||    
T  18270413 ctccaatgaaaaacccatacacccgtgaatcaaagaaaaaatccaaaaaacctataggaaacgcctcctagcaaagagctatctctgaaatcaattaata 18270314  T
Q  160 gaaacaccaaaacaaagctaacaccacgatcaacgaaacaacataaac 207  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  18270313 gaaacaccaaaaccaagctaacagcacgatcaacgaaacaacataaac 18270266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 164 - 208
Target Start/End: Complemental strand, 3576911 - 3576867
Alignment:
Q  164 caccaaaacaaagctaacaccacgatcaacgaaacaacataaaca 208  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||    
T  3576911 caccaaaaccaagctaacagcacgatcaacgaaacaacataaaca 3576867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 105 - 193
Target Start/End: Complemental strand, 3364146 - 3364057
Alignment:
Q  105 aaaaacctataggaaacgcctcctaacaaagggctatcttcgaaatcaataaatagaaacac-caaaacaaagctaacaccacgatcaac 193  Q
    |||||| |||| |||||||||| | |||||| ||||||| | ||||||||||||| ||||||  |||||||| ||| |||||| ||||||    
T  3364146 aaaaacttataagaaacgcctcattacaaagagctatctccaaaatcaataaataaaaacactaaaaacaaaactatcaccaccatcaac 3364057  T

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Target: scaffold0341 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 105 - 183
Target Start/End: Complemental strand, 6086 - 6007
Alignment:
Q  105 aaaaacctataggaaacgcctcctaacaaagggctatcttcgaaatcaataaatagaaacacc-aaaacaaagctaacac 183  Q
    |||||| |||| ||||| | ||||||||||||| |||||||||||||||||||   ||||||| ||||||||||||||||    
T  6086 aaaaacttataagaaacacatcctaacaaagggttatcttcgaaatcaataaaagaaaacaccaaaaacaaagctaacac 6007  T

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Target: scaffold0009 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 105 - 185
Target Start/End: Original strand, 53927 - 54008
Alignment:
Q  105 aaaaacctataggaaacgcctcctaacaaagggctatcttcgaaatcaataaatagaaacacc-aaaacaaagctaacacca 185  Q
    ||||||||| |||||||  |||||||||||||| ||||| | |||||||||||  |||||||| ||||||||||| ||||||    
T  53927 aaaaacctacaggaaacatctcctaacaaagggatatctccaaaatcaataaaaggaaacaccaaaaacaaagctgacacca 54008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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