View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF6487_low_2 (Length: 754)
Name: NF6487_low_2
Description: NF6487
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6487_low_2 |
 | |
|
| [»] scaffold0220 (1 HSPs) |
| | |
|
| [»] scaffold0029 (1 HSPs) |
| | |
|
| [»] scaffold0002 (3 HSPs) |
| | |
|
| [»] scaffold0418 (1 HSPs) |
| | |
|
| [»] scaffold0012 (1 HSPs) |
| | |
|
Alignment Details
Target: chr1 (Bit Score: 229; Significance: 1e-126; HSPs: 13)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 417 - 750
Target Start/End: Complemental strand, 7264228 - 7263886
Alignment:
| Q |
417 |
acaaaaatttcaattcaaaataagaatcagaaatataacttttttagctcactttatggtaaagattaacatataaatataaagaaatttagaatattaa |
516 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
7264228 |
acaaaaatttcaattcaaaataagaatcagaaatagaacttttttagctcactttatggtaaagattaaaatataaatataaagaaatttagaatattaa |
7264129 |
T |
|
| Q |
517 |
tttgaaaataatttaggacccatttgtctcaatatttttcaacaaaatatagaaatatttacttgaaattcgtttacttaataacttaaaaatttatcct |
616 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7264128 |
tttgaaaataatttaggacccatttgtctcaatatttttcaacaaaatatagaaatattttcttgaaattcgtttacttaataacttaaaaatttatcct |
7264029 |
T |
|
| Q |
617 |
ttac----------nnnnnnnnnncttaaaaatttatcgtttc-agcacaaatcttatcatttcattcgattttacctttttaatttgtgctcttagcat |
705 |
Q |
| |
|
|||| ||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7264028 |
ttacaaaaaaaaaaaaaaaaaaaacttaaaaatttatcgtttcaagtgcaaattttatcatttcattcgattttacctttttaatttgtgctcttagcac |
7263929 |
T |
|
| Q |
706 |
gattcatagaataattacgttaagagtctttttcttcatctcact |
750 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||| ||||||| |
|
|
| T |
7263928 |
gattcatagaataattacgtta--agtctttttcttcctctcact |
7263886 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 214 - 391
Target Start/End: Original strand, 52336130 - 52336308
Alignment:
| Q |
214 |
gaaaaagccaaaatgaaattatataacaatgcagtc-ctaaagcacaaagtgtgtcatagagactacaacaagaatcaagagttgcaacaaaacaatcaa |
312 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||| ||||||| ||||| |||||||| ||||||| || |||||||||||||||||||| ||| |
|
|
| T |
52336130 |
gaaaaagccaaaatgaaattatataacaatgcagtctctagagcacaatgtgtgccatagagattacaacaggagccaagagttgcaacaaaacaaccaa |
52336229 |
T |
|
| Q |
313 |
tccaacagagctacatcagcctatacccaaacacacaagaggacaaaaccaccactgttgagtaccaaacacaaaaata |
391 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| || |||||||||| ||||||||||||||||||||| |
|
|
| T |
52336230 |
cccaacagagctacatcagcctatacccaaacacacaagagggcatgaccaccactgctgagtaccaaacacaaaaata |
52336308 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 113; E-Value: 8e-57
Query Start/End: Original strand, 214 - 388
Target Start/End: Original strand, 4644480 - 4644656
Alignment:
| Q |
214 |
gaaaaagccaaaatgaaattatataacaatgcagtcc-taaagcacaaagtgtgtcatagagactacaacaagaatcaagagttgcaacaaaa-caatca |
311 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||| || ||||||| ||||| |||||||||||||||||||| |||||||| |||||||| ||| || |
|
|
| T |
4644480 |
gaaaaagccaaaacgaaattatataacaatgcagtccctagagcacaaggtgtgccatagagactacaacaagaaccaagagttacaacaaaaacaacca |
4644579 |
T |
|
| Q |
312 |
atccaacagagctacatcagcctatacccaaacacacaagaggacaaaaccaccactgttgagtaccaaacacaaaa |
388 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||||| || |||||||||| |||||||||||||||||| |
|
|
| T |
4644580 |
acccaacagagctacatcagcctatacccaaacacacaagagggcacgaccaccactgctgagtaccaaacacaaaa |
4644656 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 214 - 388
Target Start/End: Original strand, 21527628 - 21527804
Alignment:
| Q |
214 |
gaaaaagccaaaatgaaattatataacaatgcagtcc-taaagcacaaagtgtgtcatagagactacaa-caagaatcaagagttgcaacaaaacaatca |
311 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||| || ||||||| ||||| |||||||||||||| || ||| |||||||| ||||||||||| || |
|
|
| T |
21527628 |
gaaaaagccaaaatgaaattatataacagtgcagtccctagagcacaaggtgtgccatagagactacaaacaggaaccaagagttacaacaaaacaaaca |
21527727 |
T |
|
| Q |
312 |
atccaacagagctacatcagcctatacccaaacacacaagaggacaaaaccaccactgttgagtaccaaacacaaaa |
388 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||| |||||| ||| |||||||||| |||||||||||||||||| |
|
|
| T |
21527728 |
acccaacagagctacatcagcctatacccaaacacataagagggcaagaccaccactgctgagtaccaaacacaaaa |
21527804 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 214 - 388
Target Start/End: Complemental strand, 9528426 - 9528250
Alignment:
| Q |
214 |
gaaaaagccaaaatgaaattatataacaatgcagtcc-taaagcacaaagtgtgtcatagagactacaa-caagaatcaagagttgcaacaaaacaatca |
311 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||| || |||| || ||||| |||||||||||||| || ||| |||||||| || |||||||| || |
|
|
| T |
9528426 |
gaaaaagctaaaatgaaattatataacaatgcagtccctagagcataaggtgtgccatagagactacaaacaggaaccaagagttacaccaaaacaaaca |
9528327 |
T |
|
| Q |
312 |
atccaacagagctacatcagcctatacccaaacacacaagaggacaaaaccaccactgttgagtaccaaacacaaaa |
388 |
Q |
| |
|
| ||||||||| |||||||||||||||||||||||| |||||||||| |||||||||| |||||||||||||||||| |
|
|
| T |
9528326 |
acccaacagagttacatcagcctatacccaaacacataagaggacaagaccaccactgctgagtaccaaacacaaaa |
9528250 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 214 - 388
Target Start/End: Complemental strand, 14366297 - 14366121
Alignment:
| Q |
214 |
gaaaaagccaaaatgaaattatataacaatgcagtcc-taaagcacaaagtgtgtcatagagactacaa-caagaatcaagagttgcaacaaaacaatca |
311 |
Q |
| |
|
|||||||||||||| |||||||||||||||||| ||| || ||||||| ||||| |||||||||| ||| || ||| |||||||| ||||||||||| || |
|
|
| T |
14366297 |
gaaaaagccaaaataaaattatataacaatgcaatccctagagcacaaggtgtgccatagagactgcaaacaggaaccaagagttacaacaaaacaacca |
14366198 |
T |
|
| Q |
312 |
atccaacagagctacatcagcctatacccaaacacacaagaggacaaaaccaccactgttgagtaccaaacacaaaa |
388 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||||| || |||||||||| |||||||||||||||||| |
|
|
| T |
14366197 |
acccaacagagctacatcagcctatacccaaacacacaagagggcatgaccaccactgctgagtaccaaacacaaaa |
14366121 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 18 - 111
Target Start/End: Complemental strand, 7264381 - 7264288
Alignment:
| Q |
18 |
atgataatatatgatgaattgcaattgtttaagaaacttttcacttagataataacacaatcgatacttactgacacagcttaaaacccgttaa |
111 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7264381 |
atgataatatatgatgaattgcaattgtttaagaaacttttcacttagataataacacaatcgatacttactgacacagcttaaaacccgttaa |
7264288 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 216 - 388
Target Start/End: Complemental strand, 48266389 - 48266215
Alignment:
| Q |
216 |
aaaagccaaaatgaaattatataacaatgcagt-cctaaagcacaaagtgtgtcatagagactacaa-caagaatcaagagttgcaacaaaacaatcaat |
313 |
Q |
| |
|
||||||||||||||||||||||||||||||| | |||| ||||||| ||||| |||||||||||||| || ||| |||||||| ||||||||||| ||| |
|
|
| T |
48266389 |
aaaagccaaaatgaaattatataacaatgcaattcctagagcacaatgtgtgccatagagactacaaacaggaaccaagagttacaacaaaacaaccaac |
48266290 |
T |
|
| Q |
314 |
ccaacagagctacatcagcctatacccaaacacacaagaggacaaaaccaccactgttgagtaccaaacacaaaa |
388 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||| | |||||||||| | |||| ||||||||||| |
|
|
| T |
48266289 |
acaacagagctacatcaacctatacccaaacacacaagagggtatgaccaccactgctaagtatcaaacacaaaa |
48266215 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 215 - 391
Target Start/End: Original strand, 47115756 - 47115934
Alignment:
| Q |
215 |
aaaaagccaaaatgaaattatataacaatgcagtcctaa-agcacaaagtgtgtcatagagactacaacaagaatcaagagttgcaacaaa-acaatcaa |
312 |
Q |
| |
|
||||||| ||||||||||||||||| |||| ||| || | ||||||| ||||||| |||||||||||||| || |||||||| ||||||| |||| ||| |
|
|
| T |
47115756 |
aaaaagctaaaatgaaattatataataatgaagttcttagagcacaaggtgtgtcttagagactacaacagaaaccaagagttacaacaaatacaaccaa |
47115855 |
T |
|
| Q |
313 |
tccaacagagctacatcagcctatacccaaacacacaagaggacaaaaccaccactgttgagtaccaaacacaaaaata |
391 |
Q |
| |
|
|||||| |||||||| ||||||||||||||||||||||||| || |||||||||| || |||||||| |||||||| |
|
|
| T |
47115856 |
cccaacaaagctacattagcctatacccaaacacacaagagggcatgaccaccactgctgggtaccaaaagcaaaaata |
47115934 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 124 - 202
Target Start/End: Complemental strand, 7264306 - 7264219
Alignment:
| Q |
124 |
acagcttaaaacccgttaattaataatgctaatttcatgtatcaatctattat---------atataattttaaaaatacaaaaattt |
202 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
7264306 |
acagcttaaaacccgttaattaataatgctaatttcatgtatcaatctattatatcattatgatataattttaaaaatacaaaaattt |
7264219 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 214 - 377
Target Start/End: Original strand, 36305251 - 36305416
Alignment:
| Q |
214 |
gaaaaagccaaaatgaaattatataacaatgcagt-cctaaagcacaaagtgtgtcatagagactacaacaagaatcaagagttgcaacaa-aacaatca |
311 |
Q |
| |
|
|||||||||||||||||| |||||||||| |||| |||| ||||||| ||||| | |||||||||| ||| ||| |||||||| |||||| |||| | |
|
|
| T |
36305251 |
gaaaaagccaaaatgaaa-tatataacaaaacagtccctagagcacaaggtgtgccttagagactaccacaggaaccaagagttacaacaattacaaacc |
36305349 |
T |
|
| Q |
312 |
at-ccaacagagctacatcagcctatacccaaacacacaagaggacaaaaccaccactgttgagtac |
377 |
Q |
| |
|
|| ||||||| |||||| |||| ||| ||||||| |||||||| || ||||||||||||| |||| |
|
|
| T |
36305350 |
atcccaacaggactacattagccaatagccaaacaaacaagagggcatgaccaccactgttgggtac |
36305416 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 214 - 387
Target Start/End: Original strand, 36928634 - 36928809
Alignment:
| Q |
214 |
gaaaaagccaaaatgaaattatataacaatgcagt-cctaaagcacaaagtgtgtcatagagactacaacaagaatcaagagttgcaacaa--aacaatc |
310 |
Q |
| |
|
|||||||||||||||||| |||||||||| ||||| |||| ||||||| ||||| | |||||||||| | | ||| |||||||| |||||| | || | |
|
|
| T |
36928634 |
gaaaaagccaaaatgaaa-tatataacaaagcagtccctagagcacaaggtgtgccttagagactaccataggaaccaagagttacaacaattacaaacc |
36928732 |
T |
|
| Q |
311 |
aatccaacagagctacatcagcctatacccaaacacacaagaggacaaaaccaccactgttgagtaccaaacacaaa |
387 |
Q |
| |
|
|| |||| | |||| | |||| ||||||||||| |||||||| | |||||||||||||| |||||||| ||||| |
|
|
| T |
36928733 |
aacccaatcggactacgttagccaatacccaaacaaacaagagggcttaaccaccactgttgggtaccaaaaacaaa |
36928809 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 215 - 388
Target Start/End: Complemental strand, 25640137 - 25639960
Alignment:
| Q |
215 |
aaaaagccaaaatgaaattatataacaatgcagtc-ctaaagcacaaagtgtgtcatagagactacaacaagaatcaagagttgcaacaaa---acaatc |
310 |
Q |
| |
|
|||||| |||||||| ||||||||| || |||||| ||| ||||||| || || |||||||||| ||| ||| |||||||| ||||||| | || | |
|
|
| T |
25640137 |
aaaaagtcaaaatgagattatataataaagcagtctctagagcacaaggtctgctttagagactactacaggaaccaagagttacaacaaatacaaaacc |
25640038 |
T |
|
| Q |
311 |
aatccaacagagctacatcagcctatacccaaacacacaagaggacaaaaccaccactgttgagtaccaaacacaaaa |
388 |
Q |
| |
|
|| ||||||| |||||| || | ||||||||||| |||||||| | |||||||||| || |||||||| |||||| |
|
|
| T |
25640037 |
aacccaacaggactacattagtcaatacccaaacaaacaagagggtatgaccaccactgctgggtaccaaaaacaaaa |
25639960 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 122; Significance: 3e-62; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 216 - 388
Target Start/End: Original strand, 1682510 - 1682683
Alignment:
| Q |
216 |
aaaagccaaaatgaaattatataacaatgcagt-cctaaagcacaaagtgtgtcatagagactacaacaagaatcaagagttgcaacaaaacaatcaatc |
314 |
Q |
| |
|
||||| |||||||||||||||| |||||||||| |||||||||||| ||||| |||||||||||| ||||||| |||||||| ||||||||||| ||||| |
|
|
| T |
1682510 |
aaaagtcaaaatgaaattatatgacaatgcagtgcctaaagcacaaggtgtgccatagagactactacaagaaccaagagttacaacaaaacaaccaatc |
1682609 |
T |
|
| Q |
315 |
caacagagctacatcagcctatacccaaacacacaagaggacaaaaccaccactgttgagtaccaaacacaaaa |
388 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
1682610 |
caacagagctacatgagcctatacccaaacacacaagaggacatgaccaccactgttgagtaccaaacacaaaa |
1682683 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 216 - 388
Target Start/End: Original strand, 33629568 - 33629741
Alignment:
| Q |
216 |
aaaagccaaaatgaaattatataacaatgcagtcc-taaagcacaaagtgtgtcatagagactacaacaagaatcaagagttgcaacaaaacaatcaatc |
314 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||| |||||||||| ||||| |||||||||||||||||||| |||||||| ||||||||||| ||| | |
|
|
| T |
33629568 |
aaaagccaaaatgaaattatataacaatgtagtccctaaagcacaaggtgtgccatagagactacaacaagaaccaagagttacaacaaaacaaccaacc |
33629667 |
T |
|
| Q |
315 |
caacagagctacatcagcctatacccaaacacacaagaggacaaaaccaccactgttgagtaccaaacacaaaa |
388 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||| || ||||||||||||||||||||||||||||| |
|
|
| T |
33629668 |
caacagagctacatcagcctatactcaaacacacaagagggcatgaccaccactgttgagtaccaaacacaaaa |
33629741 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 119; Significance: 2e-60; HSPs: 6)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 215 - 388
Target Start/End: Complemental strand, 3130650 - 3130476
Alignment:
| Q |
215 |
aaaaagccaaaatgaaattatataacaatgcagt-cctaaagcacaaagtgtgtcatagagactacaacaagaatcaagagttgcaacaaaacaatcaat |
313 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||| |||| ||||| | |||||||||||||| ||| |||||||| ||||||||||| ||| |
|
|
| T |
3130650 |
aaaaagccaaaatgaaattatataacaatgcagttcctaaagtacaaggtgtgccgtagagactacaacaggaaccaagagttacaacaaaacaaccaac |
3130551 |
T |
|
| Q |
314 |
ccaacagagctacatcagcctatacccaaacacacaagaggacaaaaccaccactgttgagtaccaaacacaaaa |
388 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||||| |
|
|
| T |
3130550 |
ccaacagagctacatcagcctatacccaaacacacaagagggcaagaccaccactgttgagtatcaaacacaaaa |
3130476 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 214 - 388
Target Start/End: Original strand, 47540393 - 47540568
Alignment:
| Q |
214 |
gaaaaagccaaaatgaaattatataacaatgcagtcc-taaagcacaaagtgtgtcatagagactacaacaagaatcaagagttgcaacaaaacaatcaa |
312 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||| ||||||||| ||| |||||||| ||||||||||| ||| |
|
|
| T |
47540393 |
gaaaaagccaaaatgaaattatataacaatgcagtccctaacgcacaaagtgtgctatagatactacaacaggaaccaagagttacaacaaaacaaccaa |
47540492 |
T |
|
| Q |
313 |
tccaacagagctacatcagcctatacccaaacacacaagaggacaaaaccaccactgttgagtaccaaacacaaaa |
388 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||| || |||||||||| |||||||||||||||||| |
|
|
| T |
47540493 |
cccaacagagttacatcagcctatacccaaacacacaagagggcatgaccaccactgctgagtaccaaacacaaaa |
47540568 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 215 - 388
Target Start/End: Complemental strand, 5817853 - 5817678
Alignment:
| Q |
215 |
aaaaagccaaaatgaaattatataacaatgcagtcc-taaagcacaaagtgtgtcatagagactacaa-caagaatcaagagttgcaacaaaacaatcaa |
312 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||| || |||||| ||||| |||||||||||||| || ||| ||||| || |||||||||| ||| |
|
|
| T |
5817853 |
aaaaagccaaaataaaattatataacaatgcagtccctagagcacagggtgtgccatagagactacaaacaggaaccaagaattaaaacaaaacaaacaa |
5817754 |
T |
|
| Q |
313 |
tccaacagagctacatcagcctatacccaaacacacaagaggacaaaaccaccactgttgagtaccaaacacaaaa |
388 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||| ||| |||||||||| |||||||||||||||||| |
|
|
| T |
5817753 |
cccaacagagctacatcagcctatacccaaacacataagagggcaagaccaccactgctgagtaccaaacacaaaa |
5817678 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 214 - 388
Target Start/End: Complemental strand, 8655746 - 8655570
Alignment:
| Q |
214 |
gaaaaagccaaaatgaaattatataacaatgcagtcc-taaagcacaaagtgtgtcatagagactacaa-caagaatcaagagttgcaacaaaacaatca |
311 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| || || ||||||| ||||| |||||||||||||| || ||| |||||||| ||||||||||| || |
|
|
| T |
8655746 |
gaaaaagccaaaatgaaattatataacaatgcagcccgtagagcacaaggtgtgccatagagactacaaacaggaaccaagagttacaacaaaacaaaca |
8655647 |
T |
|
| Q |
312 |
atccaacagagctacatcagcctatacccaaacacacaagaggacaaaaccaccactgttgagtaccaaacacaaaa |
388 |
Q |
| |
|
| |||||| | ||||||||||||||||||||||||| ||||| || |||||||||| |||||||||||||||||| |
|
|
| T |
8655646 |
acccaacataactacatcagcctatacccaaacacatgagagggtaagaccaccactgctgagtaccaaacacaaaa |
8655570 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 215 - 388
Target Start/End: Complemental strand, 7663912 - 7663735
Alignment:
| Q |
215 |
aaaaagccaaaatgaaattatataacaatgcagt-cctaaagcacaaagtgtgtcatagagactacaacaagaatcaagagttgcaacaaa---acaatc |
310 |
Q |
| |
|
||||||||||||||| |||||||||||| ||| | ||||||||| || ||||| | |||||||||| ||| ||| |||||||| ||||||| | || | |
|
|
| T |
7663912 |
aaaaagccaaaatgagattatataacaaagcaatccctaaagcataaggtgtgccttagagactactacaggaaccaagagttacaacaaatacaaaacc |
7663813 |
T |
|
| Q |
311 |
aatccaacagagctacatcagcctatacccaaacacacaagaggacaaaaccaccactgttgagtaccaaacacaaaa |
388 |
Q |
| |
|
|| |||||| |||||| |||| ||||||||||| ||||||| || |||||||||| || |||||||| |||||| |
|
|
| T |
7663812 |
aacccaacaagactacattagccaatacccaaacaaacaagagagcatgaccaccactgatgggtaccaaaaacaaaa |
7663735 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 318 - 388
Target Start/End: Original strand, 23279180 - 23279250
Alignment:
| Q |
318 |
cagagctacatcagcctatacccaaacacacaagaggacaaaaccaccactgttgagtaccaaacacaaaa |
388 |
Q |
| |
|
|||||| |||| | |||||||||||||| |||||||| ||| ||||||||||||| ||||| || |||||| |
|
|
| T |
23279180 |
cagagcaacattaacctatacccaaacaaacaagagggcaagaccaccactgttgggtaccgaaaacaaaa |
23279250 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 117; Significance: 3e-59; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 214 - 388
Target Start/End: Complemental strand, 10487579 - 10487403
Alignment:
| Q |
214 |
gaaaaagccaaaatgaaattatataacaatgcagtcc-taaagcacaaagtgtgtcatagagactaca-acaagaatcaagagttgcaacaaaacaatca |
311 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| || ||||||| ||||| ||||||||||||| ||| ||| |||||||| ||||||||||| || |
|
|
| T |
10487579 |
gaaaaagccaaaatgaaattatataacaatgcagtccctagagcacaaggtgtgccatagagactacacacatgaaccaagagttacaacaaaacaaaca |
10487480 |
T |
|
| Q |
312 |
atccaacagagctacatcagcctatacccaaacacacaagaggacaaaaccaccactgttgagtaccaaacacaaaa |
388 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||||||||| |
|
|
| T |
10487479 |
acccaacagagctacatcagcctatacccaaacacataagagggcaagaccaccactgttgagtaccaaacacaaaa |
10487403 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 111; Significance: 1e-55; HSPs: 5)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 215 - 388
Target Start/End: Original strand, 32004449 - 32004623
Alignment:
| Q |
215 |
aaaaagccaaaatgaaattatataacaatgcagtcc-taaagcacaaagtgtgtcatagagactacaacaagaatcaagagttgcaacaaaacaatcaat |
313 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||| || ||||||| ||||| |||||||||||||||| ||| |||||||| ||||||||||| ||| |
|
|
| T |
32004449 |
aaaaagccaaaataaaattatataacaatgcagtccctagagcacaacgtgtgccatagagactacaacaggaaccaagagttacaacaaaacaaccaac |
32004548 |
T |
|
| Q |
314 |
ccaacagagctacatcagcctatacccaaacacacaagaggacaaaaccaccactgttgagtaccaaacacaaaa |
388 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||| || |||||||||| |||||||||||||||||| |
|
|
| T |
32004549 |
ccaacagagctacatcagcctatacccaaacatacaagagggcatgaccaccactgctgagtaccaaacacaaaa |
32004623 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 215 - 388
Target Start/End: Original strand, 13447948 - 13448122
Alignment:
| Q |
215 |
aaaaagccaaaatgaaattatataacaatgcagtcc-taaagcacaaagtgtgtcatagagactacaacaagaatcaagagttgcaacaaaacaatcaat |
313 |
Q |
| |
|
|||| ||||||||||||||||||| ||||||||||| |||||||||| ||||| ||||||||||||| || ||| |||||||| ||| ||||||| ||| |
|
|
| T |
13447948 |
aaaacgccaaaatgaaattatataccaatgcagtccctaaagcacaaggtgtgccatagagactacagcaggaaccaagagttacaataaaacaaccaac |
13448047 |
T |
|
| Q |
314 |
ccaacagagctacatcagcctatacccaaacacacaagaggacaaaaccaccactgttgagtaccaaacacaaaa |
388 |
Q |
| |
|
||||||||||||||||| ||||||| |||||||||||||| ||| ||||||||||||||||||||||||||||| |
|
|
| T |
13448048 |
ccaacagagctacatcaacctatactcaaacacacaagagagcaagaccaccactgttgagtaccaaacacaaaa |
13448122 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 264 - 388
Target Start/End: Complemental strand, 49732554 - 49732430
Alignment:
| Q |
264 |
gtgtcatagagactacaacaagaatcaagagttgcaacaaaacaatcaatccaacagagctacatcagcctatacccaaacacacaagaggacaaaacca |
363 |
Q |
| |
|
|||||||||||||||||||| |||||||||||| ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| || |||| |
|
|
| T |
49732554 |
gtgtcatagagactacaacaggaatcaagagttacaacaaaacaaccaacccaacagagctacatcagcctatacccaaacacacaagagggcatgacca |
49732455 |
T |
|
| Q |
364 |
ccactgttgagtaccaaacacaaaa |
388 |
Q |
| |
|
|||||| |||||||||||||||||| |
|
|
| T |
49732454 |
ccactgctgagtaccaaacacaaaa |
49732430 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 214 - 369
Target Start/End: Complemental strand, 30168020 - 30167861
Alignment:
| Q |
214 |
gaaaaagccaaaatgaaattatataacaatgcagt-cctaaagcacaaagtgtgtcatagagactacaacaagaatcaagagttgcaacaaa---acaat |
309 |
Q |
| |
|
|||||||||||||||| |||||||||||| ||||| |||||||||||| ||||| | |||| ||||| ||| ||| |||||||| ||||||| | || |
|
|
| T |
30168020 |
gaaaaagccaaaatgagattatataacaaagcagtccctaaagcacaaggtgtgccttagaaactactacacgaaccaagagttacaacaaatacaaaac |
30167921 |
T |
|
| Q |
310 |
caatccaacagagctacatcagcctatacccaaacacacaagaggacaaaaccaccactg |
369 |
Q |
| |
|
||| |||||| |||||| |||| ||||||||||| |||||||| || |||||||||| |
|
|
| T |
30167920 |
caacccaacaagactacattagccaatacccaaacaaacaagagggcatgaccaccactg |
30167861 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 218 - 279
Target Start/End: Complemental strand, 38542885 - 38542823
Alignment:
| Q |
218 |
aagccaaaatgaaattatataacaatgcagt-cctaaagcacaaagtgtgtcatagagactac |
279 |
Q |
| |
|
||||||||||| ||||||||||||| ||||| |||| ||||||| ||||| | |||||||||| |
|
|
| T |
38542885 |
aagccaaaatggaattatataacaaagcagtccctagagcacaaggtgtgccttagagactac |
38542823 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 104; Significance: 2e-51; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 214 - 388
Target Start/End: Complemental strand, 19385382 - 19385207
Alignment:
| Q |
214 |
gaaaaagccaaaatgaaattatataacaatgcagtcc-taaagcacaaagtgtgtcatagagactacaacaagaatcaagagttgcaacaaaacaatcaa |
312 |
Q |
| |
|
||||||||| |||||||||||||||||||| |||||| ||||||| || ||||| |||||||||||||| | ||| |||||||| ||||||||||| ||| |
|
|
| T |
19385382 |
gaaaaagccgaaatgaaattatataacaatacagtccctaaagcataaggtgtgccatagagactacaataggaaccaagagttacaacaaaacaaccaa |
19385283 |
T |
|
| Q |
313 |
tccaacagagctacatcagcctatacccaaacacacaagaggacaaaaccaccactgttgagtaccaaacacaaaa |
388 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| || |||||||||| |||||||| ||||||||| |
|
|
| T |
19385282 |
cccaacagagctacatcagcctatacccaaacacacaagagggcatgaccaccactgctgagtaccgaacacaaaa |
19385207 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 215 - 387
Target Start/End: Original strand, 7451820 - 7451994
Alignment:
| Q |
215 |
aaaaagccaaaatgaaattatataacaatgcagt-cctaaagcacaaagtgtgtcatagagactacaacaagaatcaagagttgcaacaa--aacaatca |
311 |
Q |
| |
|
||||||||||||||||| |||||||||| ||||| |||| ||||||| |||| | |||||||||| | | ||| |||||||| |||||| | || || |
|
|
| T |
7451820 |
aaaaagccaaaatgaaa-tatataacaaagcagtccctagagcacaagctgtgccttagagactaccataggaaccaagagttacaacaattacaaacca |
7451918 |
T |
|
| Q |
312 |
atccaacagagctacatcagcctatacccaaacacacaagaggacaaaaccaccactgttgagtaccaaacacaaa |
387 |
Q |
| |
|
| ||||| | |||| | |||| ||||||||| | |||||||| | ||||||||||||| |||||||| ||||| |
|
|
| T |
7451919 |
acccaaccggactacgttagccaatacccaaataaacaagagggcttgaccaccactgttgggtaccaaaaacaaa |
7451994 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0220 (Bit Score: 97; Significance: 3e-47; HSPs: 1)
Name: scaffold0220
Description:
Target: scaffold0220; HSP #1
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 214 - 388
Target Start/End: Complemental strand, 22886 - 22710
Alignment:
| Q |
214 |
gaaaaagccaaaatgaaattatataacaatgcagtcc-taaagcacaaagtgtgtcatagagactacaa-caagaatcaagagttgcaacaaaacaatca |
311 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||| || ||||||| |||||||||| ||||||||| || ||| |||||||| ||||||||||| || |
|
|
| T |
22886 |
gaaaaagccaaaatgaaattatataacaatacagtccctagagcacaaggtgtgtcatacagactacaaacaggaaccaagagttacaacaaaacaaaca |
22787 |
T |
|
| Q |
312 |
atccaacagagctacatcagcctatacccaaacacacaagaggacaaaaccaccactgttgagtaccaaacacaaaa |
388 |
Q |
| |
|
| |||||||| ||| ||||||||||||||||| ||| |||||| ||| |||||||||| |||||||||||||||||| |
|
|
| T |
22786 |
acccaacagaactatatcagcctatacccaaatacataagagggcaagaccaccactgctgagtaccaaacacaaaa |
22710 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 78; Significance: 6e-36; HSPs: 6)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 268 - 388
Target Start/End: Original strand, 9546259 - 9546380
Alignment:
| Q |
268 |
catagagactacaa-caagaatcaagagttgcaacaaaacaatcaatccaacagagctacatcagcctatacccaaacacacaagaggacaaaaccacca |
366 |
Q |
| |
|
|||||||||||||| || ||| |||||||| ||||||||||| ||| |||||||||||||||||||||||||||||||||| |||||| ||| ||||||| |
|
|
| T |
9546259 |
catagagactacaaacaggaaccaagagttacaacaaaacaaacaacccaacagagctacatcagcctatacccaaacacataagagggcaagaccacca |
9546358 |
T |
|
| Q |
367 |
ctgttgagtaccaaacacaaaa |
388 |
Q |
| |
|
||| |||||||||||||||||| |
|
|
| T |
9546359 |
ctgctgagtaccaaacacaaaa |
9546380 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 214 - 388
Target Start/End: Original strand, 46623169 - 46623347
Alignment:
| Q |
214 |
gaaaaagccaaaatgaaattatataacaatgcagtcc-taaagcacaaagtgtgtcatagagactacaacaagaatcaagagttgcaacaaa---acaat |
309 |
Q |
| |
|
||||||| |||||||| |||||||||||| ||||||| || |||| |||||||||| |||||||||| ||| |||||||||||| ||||||| | ||| |
|
|
| T |
46623169 |
gaaaaagtcaaaatgagattatataacaaagcagtccctacagcataaagtgtgtcttagagactactacaggaatcaagagttacaacaaatacaaaat |
46623268 |
T |
|
| Q |
310 |
caatccaacagagctacatcagcctatacccaaacacacaagaggacaaaaccaccactgttgagtaccaaacacaaaa |
388 |
Q |
| |
|
||| |||||| |||||| | || ||||||||||| |||||||| || ||||||||| || |||||||| |||||| |
|
|
| T |
46623269 |
caacccaacatgactacattaaccaatacccaaacaaacaagagggcatgaccaccactactgggtaccaaaaacaaaa |
46623347 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 218 - 388
Target Start/End: Complemental strand, 15654376 - 15654202
Alignment:
| Q |
218 |
aagccaaaatgaaattatataacaatgcagt-cctaaagcacaaagtgtgtcatagagactacaacaagaatcaagagttgcaaca---aaacaatcaat |
313 |
Q |
| |
|
|||||||||||| |||||||||||| ||||| |||| ||||||| ||||||| |||||||||| ||| ||| |||||||| ||||| | | || ||| |
|
|
| T |
15654376 |
aagccaaaatgagattatataacaaagcagtccctagagcacaaggtgtgtcttagagactactacaggaaccaagagttacaacaattacaaaaccaac |
15654277 |
T |
|
| Q |
314 |
ccaacagagctacatcagcctatacccaaacacacaagaggacaaaaccaccactgttgagtaccaaacacaaaa |
388 |
Q |
| |
|
|||||| |||||| |||| |||||||| || |||||||| || |||| ||||| || |||||||| |||||| |
|
|
| T |
15654276 |
ccaacatgactacattagccaatacccaagcaaacaagagggcatgaccatcactgctgggtaccaaaaacaaaa |
15654202 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 214 - 387
Target Start/End: Complemental strand, 21277724 - 21277549
Alignment:
| Q |
214 |
gaaaaagccaaaatgaaattatataacaatgcagt-cctaaagcacaaagtgtgtcatagagactacaacaagaatcaagagttgcaacaa-aacaatca |
311 |
Q |
| |
|
|||||||||||||||||| |||||||||| ||||| |||| ||||||| ||||| | |||| ||||| ||| ||| |||||||| |||||| |||| | |
|
|
| T |
21277724 |
gaaaaagccaaaatgaaa-tatataacaaagcagtccctagagcacaaggtgtgccttagacactaccacaggaaccaagagttacaacaattacaaacc |
21277626 |
T |
|
| Q |
312 |
at-ccaacagagctacatcagcctatacccaaacacacaagaggacaaaaccaccactgttgagtaccaaacacaaa |
387 |
Q |
| |
|
| ||||| | |||| | |||| ||||||||||| |||||||| || |||||||||| || |||||||| ||||| |
|
|
| T |
21277625 |
gtcccaaccggactacgttagccaatacccaaacaaacaagagggcatgaccaccactgctgggtaccaaaaacaaa |
21277549 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 215 - 279
Target Start/End: Original strand, 19402686 - 19402751
Alignment:
| Q |
215 |
aaaaagccaaaatgaaattatataacaatgcagt-cctaaagcacaaagtgtgtcatagagactac |
279 |
Q |
| |
|
||||||||||||||| |||||||||||| ||||| |||| ||||||| ||||| | |||||||||| |
|
|
| T |
19402686 |
aaaaagccaaaatgagattatataacaaagcagtccctagagcacaaggtgtgccttagagactac |
19402751 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 214 - 243
Target Start/End: Original strand, 9534139 - 9534168
Alignment:
| Q |
214 |
gaaaaagccaaaatgaaattatataacaat |
243 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
9534139 |
gaaaaagccaaaatgaaattatataacaat |
9534168 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0029 (Bit Score: 77; Significance: 2e-35; HSPs: 1)
Name: scaffold0029
Description:
Target: scaffold0029; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 214 - 388
Target Start/End: Complemental strand, 135309 - 135133
Alignment:
| Q |
214 |
gaaaaagccaaaatgaaattatataacaatgcagtcc-taaagcacaaagtgtgtcatagagactacaacaagaatc-aagagttgcaacaaaacaatca |
311 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| || || ||||||| | ||| |||||||||||||| ||| | || |||| ||||||||||| || |
|
|
| T |
135309 |
gaaaaagccaaaatgaaattatataacaatgcagcccctagagcacaaggcgtgccatagagactacaaaccgaaaccaaaagttacaacaaaacaaaca |
135210 |
T |
|
| Q |
312 |
atccaacagagctacatcagcctatacccaaacacacaagaggacaaaaccaccactgttgagtaccaaacacaaaa |
388 |
Q |
| |
|
| |||||| | |||||||||||||||||||||||| ||||| ||| |||||||||| |||||||||||||||||| |
|
|
| T |
135209 |
acccaacataattacatcagcctatacccaaacacatgagagggcaagaccaccactgctgagtaccaaacacaaaa |
135133 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002 (Bit Score: 77; Significance: 2e-35; HSPs: 3)
Name: scaffold0002
Description:
Target: scaffold0002; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 214 - 388
Target Start/End: Complemental strand, 313136 - 312960
Alignment:
| Q |
214 |
gaaaaagccaaaatgaaattatataacaatgcagtcc-taaagcacaaagtgtgtcatagagactacaacaagaatc-aagagttgcaacaaaacaatca |
311 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| || || ||||||| | ||| |||||||||||||| ||| | || |||| ||||||||||| || |
|
|
| T |
313136 |
gaaaaagccaaaatgaaattatataacaatgcagcccctagagcacaaggcgtgccatagagactacaaaccgaaaccaaaagttacaacaaaacaaaca |
313037 |
T |
|
| Q |
312 |
atccaacagagctacatcagcctatacccaaacacacaagaggacaaaaccaccactgttgagtaccaaacacaaaa |
388 |
Q |
| |
|
| |||||| | |||||||||||||||||||||||| ||||| ||| |||||||||| |||||||||||||||||| |
|
|
| T |
313036 |
acccaacataattacatcagcctatacccaaacacatgagagggcaagaccaccactgctgagtaccaaacacaaaa |
312960 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 214 - 388
Target Start/End: Complemental strand, 328590 - 328414
Alignment:
| Q |
214 |
gaaaaagccaaaatgaaattatataacaatgcagtcc-taaagcacaaagtgtgtcatagagactacaacaagaatc-aagagttgcaacaaaacaatca |
311 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| || || ||||||| | ||| |||||||||||||| ||| | || |||| ||||||||||| || |
|
|
| T |
328590 |
gaaaaagccaaaatgaaattatataacaatgcagcccctagagcacaaggcgtgccatagagactacaaaccgaaaccaaaagttacaacaaaacaaaca |
328491 |
T |
|
| Q |
312 |
atccaacagagctacatcagcctatacccaaacacacaagaggacaaaaccaccactgttgagtaccaaacacaaaa |
388 |
Q |
| |
|
| |||||| | |||||||||||||||||||||||| ||||| ||| |||||||||| |||||||||||||||||| |
|
|
| T |
328490 |
acccaacataattacatcagcctatacccaaacacatgagagggcaagaccaccactgctgagtaccaaacacaaaa |
328414 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 247
Target Start/End: Complemental strand, 321815 - 321782
Alignment:
| Q |
214 |
gaaaaagccaaaatgaaattatataacaatgcag |
247 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
321815 |
gaaaaagccaaaatgaaattatataacaatgcag |
321782 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 221 - 388
Target Start/End: Original strand, 45420990 - 45421161
Alignment:
| Q |
221 |
ccaaaatgaaattatataacaatgcagtcc-taaagcacaaagtgtgtcatagagactacaacaagaatcaagagttgcaacaaa---acaatcaatcca |
316 |
Q |
| |
|
||||||||| |||||||||||| ||||||| |||||||||| ||||| | |||||||||| ||| ||| |||||||| ||||||| | || ||| ||| |
|
|
| T |
45420990 |
ccaaaatgagattatataacaaagcagtccctaaagcacaaggtgtgccttagagactactacaggaaccaagagttacaacaaatacaaaaccaaccca |
45421089 |
T |
|
| Q |
317 |
acagagctacatcagcctatacccaaacacacaagaggacaaaaccaccactgttgagtaccaaacacaaaa |
388 |
Q |
| |
|
||| |||||| |||| ||||||||||| |||||||| || |||||||||| || |||||| | |||||| |
|
|
| T |
45421090 |
acaagactacattagccaatacccaaacaaacaagagggcatgaccaccactgctgggtaccataaacaaaa |
45421161 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0418 (Bit Score: 48; Significance: 5e-18; HSPs: 1)
Name: scaffold0418
Description:
Target: scaffold0418; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 215 - 388
Target Start/End: Original strand, 7141 - 7318
Alignment:
| Q |
215 |
aaaaagccaaaatgaaattatataacaatgcagt-cctaaagcacaaagtgtgtcatagagactacaacaagaatcaagagttgcaacaaa---acaatc |
310 |
Q |
| |
|
||||||||||||||| |||||||||||| ||| | ||||||||| || ||||| | |||||||||| ||| ||| |||||||| ||||||| | || | |
|
|
| T |
7141 |
aaaaagccaaaatgagattatataacaaagcaatccctaaagcataaggtgtgccttagagactactacaggaaccaagagttacaacaaatacaaaacc |
7240 |
T |
|
| Q |
311 |
aatccaacagagctacatcagcctatacccaaacacacaagaggacaaaaccaccactgttgagtaccaaacacaaaa |
388 |
Q |
| |
|
|| |||||| |||||| |||| ||||||||||| ||||||| || |||||||||| || |||||||| |||||| |
|
|
| T |
7241 |
aacccaacaagactacattagccaatacccaaacaaacaagagagcatgaccaccactgatgggtaccaaaaacaaaa |
7318 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0012 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0012
Description:
Target: scaffold0012; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 230 - 296
Target Start/End: Complemental strand, 48614 - 48547
Alignment:
| Q |
230 |
aattatataacaatgcagtcc-taaagcacaaagtgtgtcatagagactacaacaagaatcaagagtt |
296 |
Q |
| |
|
||||||||||||||||||||| || ||||||| |||| | |||| ||||||||| |||||||||||| |
|
|
| T |
48614 |
aattatataacaatgcagtccttagagcacaatttgtgccttagaaactacaacaggaatcaagagtt |
48547 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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