View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF6487_low_31 (Length: 269)
Name: NF6487_low_31
Description: NF6487
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6487_low_31 |
 |  |
|
Alignment Details
Target: chr7 (Bit Score: 245; Significance: 1e-136; HSPs: 16)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 1 - 253
Target Start/End: Original strand, 20230079 - 20230331
Alignment:
| Q |
1 |
gtgatgtttatggtctatgtggggcatttacaagctgtaattcattgagcacgccaatttgcagctgtttgaaagggtttgatccggtgaacatacagga |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20230079 |
gtgatgtttatggtctatgtggggcatttacaagctgtaattcattgagcacgccaatttgcagctgtttgaaagggtttgatccggtgaacatacagga |
20230178 |
T |
 |
| Q |
101 |
atggaatagaaacaactggactggcgggtgtgttaggcggaaaccattgcagtgtaaaaggatcagcaataaaaccacaagtagaaaggaagacgggttt |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| |
|
|
| T |
20230179 |
atggaatagaaacaactggactggcgggtgtgttaggcggaaaccattgcagtgtaaaaggatcggcaataaaaccacaggtagaaaggaagacgggttt |
20230278 |
T |
 |
| Q |
201 |
ttgaaactacagatggttaaagttccagattttgctgaaggtttagaagggac |
253 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20230279 |
ttgaaactacagatggttaaagttccagattttgctgaaggtttagaagggac |
20230331 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 20242029 - 20242274
Alignment:
| Q |
1 |
gtgatgtttatggtctatgtggggcatttacaagctgtaattcattgagcacgccaatttgcagctgtttgaaagggtttgatccggtgaacatacagga |
100 |
Q |
| |
|
|||||||||||||||||||||| | |||||||||||||||||||||||| | ||| ||||||| ||||||||||| ||||| || || | | || |
|
|
| T |
20242029 |
gtgatgtttatggtctatgtggagattttacaagctgtaattcattgagctcaccagtttgcagttgtttgaaaggatttgaacccagaaatactcgtga |
20242128 |
T |
 |
| Q |
101 |
atggaatagaaacaactggactggcgggtgtgttaggcggaaaccattgcagtgtaaaaggatcagcaataaaaccacaagtagaaaggaagacgggttt |
200 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||| || ||| |||| |||||||||| ||| ||||||||||||||||||||||||||| |||||| |
|
|
| T |
20242129 |
atggagtagaaacaactggactggcgggtgtgttaggcagagacctttgctgtgtaaaagggtcaccaataaaaccacaagtagaaaggaagatgggttt |
20242228 |
T |
 |
| Q |
201 |
ttgaaactacagatggttaaagttccagattttgctgaaggtttag |
246 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20242229 |
ctgaaactacagatggttaaagttccagattttgctgaaggtttag |
20242274 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 20302240 - 20302481
Alignment:
| Q |
1 |
gtgatgtttatggtctatgtggggcatttacaagctgtaattcattgagcacgccaatttgcagctgtttgaaagggtttgatccggtgaacatacagga |
100 |
Q |
| |
|
|||||||||||||| | || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| |
|
|
| T |
20302240 |
gtgatgtttatggtatttgcggggcatttgcaatttgtaattcattgagcacgccaatttgcagctgtttgaaagggtttgatccaatcaacatacagga |
20302339 |
T |
 |
| Q |
101 |
atggaatagaaacaactggactggcgggtgtgttaggcggaaaccattgcagtgtaaaaggatcagcaataaaaccacaagtagaaaggaagacgggttt |
200 |
Q |
| |
|
||||||||||||||| |||||| | |||||||||||| | | | | ||||||||| ||||| ||| ||||||||||||||||| ||| ||||| |||||| |
|
|
| T |
20302340 |
atggaatagaaacaattggactagtgggtgtgttaggagaagatctttgcagtgtgaaagggtcaacaataaaaccacaagtacaaaagaagatgggttt |
20302439 |
T |
 |
| Q |
201 |
ttgaaactacagatggttaaagttccagattttgctgaaggt |
242 |
Q |
| |
|
|||||| | ||||||||||||||||| |||||||| |||||| |
|
|
| T |
20302440 |
ttgaaattgcagatggttaaagttcccgattttgcagaaggt |
20302481 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 16 - 244
Target Start/End: Complemental strand, 20169692 - 20169464
Alignment:
| Q |
16 |
tatgtggggcatttacaagctgtaattcattgagcacgccaatttgcagctgtttgaaagggtttgatccggtgaacatacaggaatggaatagaaacaa |
115 |
Q |
| |
|
|||||||||||||| |||| ||||||||||||||| | |||| || |||||||||| ||||||||| || |||||| | ||||||||| | | || |
|
|
| T |
20169692 |
tatgtggggcatttgcaagttgtaattcattgagctcaccaacatgtagctgtttgagagggtttgaacccagaaacatagaacaatggaatatacataa |
20169593 |
T |
 |
| Q |
116 |
ctggactggcgggtgtgttaggcggaaaccattgcagtgtaaaaggatcagcaataaaaccacaagtagaaaggaagacgggtttttgaaactacagatg |
215 |
Q |
| |
|
|||||| || ||||||||| | ||| ||| ||||||||| ||||| ||| ||||||||||||||||| ||||||||| ||||||||||||||||| ||| |
|
|
| T |
20169592 |
ctggaccggtgggtgtgttcgaaggacacctttgcagtgtgaaagggtcaacaataaaaccacaagtacaaaggaagatgggtttttgaaactacaaatg |
20169493 |
T |
 |
| Q |
216 |
gttaaagttccagattttgctgaaggttt |
244 |
Q |
| |
|
|||||||||||||||||||||||||||| |
|
|
| T |
20169492 |
attaaagttccagattttgctgaaggttt |
20169464 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 20272231 - 20272475
Alignment:
| Q |
1 |
gtgatgtttatggtctatgtggggcatttacaagctgtaattcattgagcacgccaatttgcagctgtttgaaagggtttgatccggtgaacatacagga |
100 |
Q |
| |
|
|||||||||||||| ||||||| |||||| ||| ||||| ||||| || | | ||||| ||||||||| ||||||| ||||| || || |||| || |
|
|
| T |
20272231 |
gtgatgtttatggtatatgtggcgcatttgcaatctgtagttcatcgacctcaccaatatgcagctgtctgaaaggatttgaacctaaaaatatacgtga |
20272330 |
T |
 |
| Q |
101 |
atggaatagaaacaactggactggcgggtgtgttaggcggaaaccattgcagtgtaaaaggatcagcaataaaaccacaagtagaaaggaagacgggttt |
200 |
Q |
| |
|
|||||| | |||||||||| |||| |||||||||||| || ||| |||||||| ||||| || ||||||||||||||||| ||||||||| ||| || |
|
|
| T |
20272331 |
atggaaaataaacaactggtctggtgggtgtgttaggaagacacctttgcagtgcgaaagggtccacaataaaaccacaagtacaaaggaagatgggatt |
20272430 |
T |
 |
| Q |
201 |
ttgaaactacagatggttaaagttccagattttgctgaaggttta |
245 |
Q |
| |
|
||||||||||||| | ||||||||||||||||||||||||||||| |
|
|
| T |
20272431 |
ttgaaactacagacgattaaagttccagattttgctgaaggttta |
20272475 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 20262662 - 20262892
Alignment:
| Q |
1 |
gtgatgtttatggtctatgtggggcatttacaagctgtaattcattgagcacgccaatttgcagctgtttgaaagggtttgatccggtgaacatacagga |
100 |
Q |
| |
|
|||||||||||||||| ||||| | ||||||||||||||||||||||||| | || | ||||| ||||||||||| ||||| || || | | || |
|
|
| T |
20262662 |
gtgatgtttatggtctctgtggagaatttacaagctgtaattcattgagctcaccggtatgcagttgtttgaaaggatttgaacccagaaatactcgtga |
20262761 |
T |
 |
| Q |
101 |
atggaatagaaacaactggactggcgggtgtgttaggcggaaaccattgcagtgtaaaaggatcagcaataaaaccacaagtagaaaggaagacgggttt |
200 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||||||||| ||| |||||| |
|
|
| T |
20262762 |
atggagtagaaacaactggactggcgggtgtgttaggcggagacctttgcagtgtgaaaggatcagcaataaaactaca---------------gggttt |
20262846 |
T |
 |
| Q |
201 |
ttgaaactacagatggttaaagttccagattttgctgaaggtttag |
246 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20262847 |
ttcaaactacagatggttaaagttccagattttgctgaaggtttag |
20262892 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 20293038 - 20293279
Alignment:
| Q |
1 |
gtgatgtttatggtctatgtggggcatttacaagctgtaattcattgagcacgccaatttgcagctgtttgaaagggtttgatccggtgaacatacagga |
100 |
Q |
| |
|
|||||||||||||| |||||||||| ||| ||||||||| |||||||||| | ||||| || |||||||||| ||| |||| || |||||| | || |
|
|
| T |
20293038 |
gtgatgtttatggtatatgtggggcctttgcaagctgtagttcattgagctcaccaatatgtagctgtttgagaggatttgtacccagaaacatagaaga |
20293137 |
T |
 |
| Q |
101 |
atggaatagaaacaactggactggcgggtgtgttaggcggaaaccattgcagtgtaaaaggatcagcaataaaaccacaagtagaaaggaagacgggttt |
200 |
Q |
| |
|
||||| || | | || ||||| || |||||||||||| ||| ||| ||| ||||| ||||| ||| |||||||||||| |||| ||||||||| |||||| |
|
|
| T |
20293138 |
atggagtaaacataattggaccggtgggtgtgttaggaggacacctttggagtgtgaaagggtcaacaataaaaccaccagtacaaaggaagatgggttt |
20293237 |
T |
 |
| Q |
201 |
ttgaaactacagatggttaaagttccagattttgctgaaggt |
242 |
Q |
| |
|
|||||| | ||||||||||||||||||||||||| |||||| |
|
|
| T |
20293238 |
ttgaaattgaagatggttaaagttccagattttgcagaaggt |
20293279 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 20064166 - 20064030
Alignment:
| Q |
1 |
gtgatgtttatggtctatgtggggcatttacaagctgtaattcattgagcacgccaatttgcagctgtttgaaagggtttgatccggtgaacatacagga |
100 |
Q |
| |
|
||||||| |||||| ||||||||||||| ||||||||| |||||||| ||| ||||| ||||||||||||||||| ||||| || || ||||||||| |
|
|
| T |
20064166 |
gtgatgtatatggtacatgtggggcatttgcaagctgtagttcattgaacacaccaatatgcagctgtttgaaaggatttgaacctaggagcatacagga |
20064067 |
T |
 |
| Q |
101 |
atggaatagaaacaactggactggcgggtgtgttagg |
137 |
Q |
| |
|
||||||||||||||||||||| || |||||||||||| |
|
|
| T |
20064066 |
atggaatagaaacaactggacaggtgggtgtgttagg |
20064030 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 20300167 - 20300408
Alignment:
| Q |
1 |
gtgatgtttatggtctatgtggggcatttacaagctgtaattcattgagcacgccaatttgcagctgtttgaaagggtttgatccggtgaacatacagga |
100 |
Q |
| |
|
|||||| ||||||| |||| |||| |||| ||||||||| |||| | || | |||||||||| ||||||||||| ||||| || | ||||| || |
|
|
| T |
20300167 |
gtgatggttatggtatatgcggggtatttgcaagctgtagttcactaagttcaccaatttgcacctgtttgaaagaatttgaacccaagtcgatacaaga |
20300266 |
T |
 |
| Q |
101 |
atggaatagaaacaactggactggcgggtgtgttaggcggaaaccattgcagtgtaaaaggatcagcaataaaaccacaagtagaaaggaagacgggttt |
200 |
Q |
| |
|
||||||||||||||| |||||||| |||||||| ||| ||| | | || |||||| ||||| ||| |||||||||||| |||| ||||||||| || ||| |
|
|
| T |
20300267 |
atggaatagaaacaattggactggtgggtgtgtcaggaggacagcttttcagtgttaaagggtcaacaataaaaccaccagtacaaaggaagatggattt |
20300366 |
T |
 |
| Q |
201 |
ttgaaactacagatggttaaagttccagattttgctgaaggt |
242 |
Q |
| |
|
|||| | | ||||||||||||||||| || ||||| |||||| |
|
|
| T |
20300367 |
ttgatattgcagatggttaaagttcctgaatttgcagaaggt |
20300408 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 7 - 235
Target Start/End: Original strand, 20287673 - 20287904
Alignment:
| Q |
7 |
tttatggtctatgtggggcatttacaagctgtaattcattgagcacgccaatttgcagctgtttgaaagggtttgatccggtgaacatacaggaatggaa |
106 |
Q |
| |
|
|||||||| ||||||||||||| ||||||||| |||||||| ||||| ||||| ||||||| ||| ||||| || ||||| |||||| ||||| |
|
|
| T |
20287673 |
tttatggtatatgtggggcattcgcaagctgtagttcattgaagttaccaatatgcagttgtttgagaggatttgaacccaggaacaaacaggagtggaa |
20287772 |
T |
 |
| Q |
107 |
tagaaacaactggactggcgggtgtgttaggcggaaaccattgcagtgtaaaaggatcagcaataaaaccacaagtaga---aaggaagacgggtttttg |
203 |
Q |
| |
|
|||| ||||||||||||| ||||||||||| ||| || ||||||||| ||||| ||| ||||| |||||||||| | |||||||| || |||||| |
|
|
| T |
20287773 |
tagacacaactggactggtgggtgtgttagaaggatacttttgcagtgtgaaagggtcaataataacaccacaagtacaaagaaggaagatggatttttg |
20287872 |
T |
 |
| Q |
204 |
aaactacagatggttaaagttccagattttgc |
235 |
Q |
| |
|
||| | |||||||||||||||| |||||||| |
|
|
| T |
20287873 |
aaattgaagatggttaaagttcctgattttgc |
20287904 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 20277975 - 20278220
Alignment:
| Q |
1 |
gtgatgtttatggtctatgtggggcatttacaagctgtaattcattgagcacgccaatttgcagctgtttgaaagggtttgatccggtgaacatacagga |
100 |
Q |
| |
|
|||||||||| ||| |||||||||||||| ||||||||| ||||||| | | ||||| || | |||| ||| ||| ||||| || |||||||| || |
|
|
| T |
20277975 |
gtgatgtttacggtatatgtggggcatttgcaagctgtagttcattgttctcaccaatatgtatctgtctgagaggatttgaacctagaaacatacaaga |
20278074 |
T |
 |
| Q |
101 |
atggaatagaaacaactggactggcgggtgtgttaggcggaaaccattgcagtgtaaaaggatcagcaataaaaccacaagtagaaaggaagacgggttt |
200 |
Q |
| |
|
||||||| || | |||||||| || |||||||||||| | | | |||||||||| ||| | ||||||||||||| | ||||||||||| | |||| |
|
|
| T |
20278075 |
atggaatggacataactggaccggtgggtgtgttaggagaaccactttgcagtgtagtagggataacaataaaaccacacggagaaaggaagatgcgttt |
20278174 |
T |
 |
| Q |
201 |
ttgaaactacagatggttaaagttccagattttgctgaaggtttag |
246 |
Q |
| |
|
|||||| |||||| ||| ||||| |||| ||||||||||| ||||| |
|
|
| T |
20278175 |
ttgaaattacagacggtgaaagtaccagcttttgctgaagctttag |
20278220 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 171 - 242
Target Start/End: Complemental strand, 20090545 - 20090474
Alignment:
| Q |
171 |
aaaaccacaagtagaaaggaagacgggtttttgaaactacagatggttaaagttccagattttgctgaaggt |
242 |
Q |
| |
|
|||||||||| || ||||||||| |||||||||||| | ||||||||||||||||||||||||| |||||| |
|
|
| T |
20090545 |
aaaaccacaaatacaaaggaagatgggtttttgaaattgaagatggttaaagttccagattttgcagaaggt |
20090474 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 20282553 - 20282599
Alignment:
| Q |
1 |
gtgatgtttatggtctatgtggggcatttacaagctgtaattcattg |
47 |
Q |
| |
|
|||||| ||||||| |||||||||||||| ||||||||||||||||| |
|
|
| T |
20282553 |
gtgatgcttatggtatatgtggggcatttgcaagctgtaattcattg |
20282599 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 19937429 - 19937536
Alignment:
| Q |
1 |
gtgatgtttatggtctatgtggggcatttacaagctgtaattcattgagcacgccaatttgcagctgtttgaaagggtttgatccggtgaacatacagga |
100 |
Q |
| |
|
|||||||||||||| ||||||| ||| |||||||||||||| ||| | ||||| || |||||||||||||||||||| || ||||| | |||| |
|
|
| T |
19937429 |
gtgatgtttatggtgtatgtggacattttgcaagctgtaattcacaaagctcaccaatatgtagctgtttgaaagggtttgagccaaggaacaaagagga |
19937528 |
T |
 |
| Q |
101 |
atggaata |
108 |
Q |
| |
|
|||||||| |
|
|
| T |
19937529 |
atggaata |
19937536 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 19968568 - 19968675
Alignment:
| Q |
1 |
gtgatgtttatggtctatgtggggcatttacaagctgtaattcattgagcacgccaatttgcagctgtttgaaagggtttgatccggtgaacatacagga |
100 |
Q |
| |
|
|||||||||||||| ||||||| ||| |||||||||||||| ||| | ||||| || |||||||||||||||||||| || ||||| | |||| |
|
|
| T |
19968568 |
gtgatgtttatggtgtatgtggacattttgcaagctgtaattcacaaagctcaccaatatgtagctgtttgaaagggtttgagccaaggaacaaagagga |
19968667 |
T |
 |
| Q |
101 |
atggaata |
108 |
Q |
| |
|
|||||||| |
|
|
| T |
19968668 |
atggaata |
19968675 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 235
Target Start/End: Complemental strand, 20064003 - 20063947
Alignment:
| Q |
179 |
aagtagaaaggaagacgggtttttgaaactacagatggttaaagttccagattttgc |
235 |
Q |
| |
|
||||| ||| ||||| |||||||||||| | |||||||||||||||| |||||||| |
|
|
| T |
20064003 |
aagtacaaaagaagatgggtttttgaaattgaagatggttaaagttcctgattttgc |
20063947 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 40825471 - 40825237
Alignment:
| Q |
1 |
gtgatgtttatggtctatgtggggcatttacaagctgtaattcattgagcacgccaatttgcagctgtttgaaagggtttgatccggtgaacatacagga |
100 |
Q |
| |
|
|||| ||||||||| |||||||||||||| ||||||||| |||||||| || || ||||| ||||||| ||| ||||| || ||||| |||||| |
|
|
| T |
40825471 |
gtgacgtttatggtatatgtggggcattttcaagctgtagttcattgaagttaccgatatgcagttgtttgagaggatttgaacccaggaacaaacagga |
40825372 |
T |
 |
| Q |
101 |
atggaatagaaacaactggactggcgggtgtgttaggcggaaaccattgcagtgtaaaaggatcagcaataaaaccacaagtagaaaggaagacgggttt |
200 |
Q |
| |
|
||||||||| |||||||||| || ||||||||||| ||| || ||||||||| ||| | ||| ||||| || ||||||| ||||||||| |||||| |
|
|
| T |
40825371 |
gtggaatagacacaactggacaggtgggtgtgttagaaggacacttttgcagtgtgaaaaggtcaataataagacaacaagtacaaaggaagatgggttt |
40825272 |
T |
 |
| Q |
201 |
ttgaaactacagatggttaaagttccagattttgc |
235 |
Q |
| |
|
|||||| | ||||||||||||||||| |||||||| |
|
|
| T |
40825271 |
ttgaaattgcagatggttaaagttcctgattttgc |
40825237 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 40820803 - 40820598
Alignment:
| Q |
1 |
gtgatgtttatggtctatgtggggcatttacaagctgtaattcattgagcacgccaatttgcagctgtttgaaagggtttgatccggtgaacatacagga |
100 |
Q |
| |
|
|||||||||||||| |||||| |||||| ||||||||| || ||||||| ||||||| || |||||||| | ||| |||| || |||||| | || |
|
|
| T |
40820803 |
gtgatgtttatggtatatgtgcagcatttgcaagctgtagtttattgagctcgccaatatgtagctgttttagaggatttgtacccagaaacatagaaga |
40820704 |
T |
 |
| Q |
101 |
atggaatagaaacaactggactggcgggtgtgttaggcggaaaccattgcagtgtaaaaggatcagcaataaaaccacaagtagaaaggaagacgggttt |
200 |
Q |
| |
|
||||| || | | || ||||| || ||||||||||| ||| ||| ||| ||||| |||||||||||||||||||||| |||| ||||||| | |||||| |
|
|
| T |
40820703 |
atggagtatacataattggacgggtcggtgtgttaggaggacacctttggagtgtgaaaggatcagcaataaaaccacgagtacaaaggaaaatgggttt |
40820604 |
T |
 |
| Q |
201 |
ttgaaa |
206 |
Q |
| |
|
|||||| |
|
|
| T |
40820603 |
ttgaaa |
40820598 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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