View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6487_low_42 (Length: 236)
Name: NF6487_low_42
Description: NF6487
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6487_low_42 |
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Alignment Details
Target: chr6 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 32052167 - 32052383
Alignment:
| Q |
1 |
aataagcatctagacaaagtagatgagttataattaccaggagtggatgcattgagtagttggttaggtgaaattagagcaagtggagtagcactgcgta |
100 |
Q |
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| T |
32052167 |
aataagcatctagacaaagtagatgagttataattaccaggagtggatgcattgagtagttggttaggtgaaattagagcaagtggagtagcactgcgta |
32052266 |
T |
|
| Q |
101 |
atgaagctttcatggttgtggtggcaattggaaataataatggcaagatgtggcacctagttctatactttgggagtgaaataatgtaatgttgtcttgt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32052267 |
atgaagctttcatggttgtggtggcaattggaaataataatggcaagatgtggcacctagttctatactttgggagtgaaataatgtaatgttgtcttgt |
32052366 |
T |
|
| Q |
201 |
cgttttactatgttgat |
217 |
Q |
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||||||||||||||||| |
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| T |
32052367 |
cgttttactatgttgat |
32052383 |
T |
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