View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6490_low_1 (Length: 715)

Name: NF6490_low_1
Description: NF6490
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6490_low_1
NF6490_low_1
[»] chr1 (43 HSPs)
chr1 (103-308)||(5381644-5381847)
chr1 (103-227)||(21985937-21986061)
chr1 (103-236)||(21744626-21744760)
chr1 (72-228)||(21409710-21409867)
chr1 (72-228)||(20850012-20850168)
chr1 (106-308)||(21733373-21733577)
chr1 (103-177)||(41315248-41315320)
chr1 (71-124)||(23065826-23065879)
chr1 (106-279)||(31926296-31926470)
chr1 (106-279)||(21699117-21699281)
chr1 (106-207)||(11140173-11140273)
chr1 (103-169)||(30490543-30490607)
chr1 (71-124)||(20243518-20243571)
chr1 (71-124)||(20595260-20595313)
chr1 (173-249)||(21543234-21543310)
chr1 (72-124)||(954237-954289)
chr1 (72-124)||(3705914-3705966)
chr1 (161-228)||(18271413-18271483)
chr1 (161-228)||(18276067-18276137)
chr1 (103-138)||(2332049-2332084)
chr1 (180-245)||(32651689-32651756)
chr1 (175-249)||(42094829-42094903)
chr1 (74-124)||(22434104-22434154)
chr1 (71-124)||(19777804-19777857)
chr1 (106-138)||(19336785-19336817)
chr1 (72-124)||(27281174-27281226)
chr1 (161-216)||(29553504-29553560)
chr1 (3-38)||(8276083-8276118)
chr1 (106-169)||(23634531-23634592)
chr1 (106-169)||(23713214-23713275)
chr1 (103-138)||(24960893-24960928)
chr1 (3-38)||(38056766-38056801)
chr1 (92-131)||(48428811-48428850)
chr1 (183-249)||(16373089-16373153)
chr1 (159-223)||(21660459-21660527)
chr1 (164-198)||(23065754-23065788)
chr1 (1-43)||(51324426-51324468)
chr1 (109-138)||(297399-297428)
chr1 (98-131)||(19045420-19045453)
chr1 (173-223)||(19663410-19663462)
chr1 (98-131)||(20396035-20396068)
chr1 (181-228)||(20902237-20902286)
chr1 (109-138)||(45308191-45308220)
[»] scaffold0019 (2 HSPs)
scaffold0019 (103-308)||(13627-13828)
scaffold0019 (173-226)||(34552-34606)
[»] chr3 (44 HSPs)
chr3 (103-308)||(14287997-14288201)
chr3 (103-261)||(35985698-35985855)
chr3 (106-308)||(42110205-42110408)
chr3 (103-227)||(24283490-24283611)
chr3 (72-279)||(12536725-12536932)
chr3 (185-308)||(13062446-13062569)
chr3 (103-199)||(14646967-14647054)
chr3 (71-124)||(14293685-14293738)
chr3 (71-124)||(14299312-14299365)
chr3 (72-124)||(16382057-16382109)
chr3 (72-124)||(16829118-16829170)
chr3 (72-124)||(16837640-16837692)
chr3 (71-169)||(16822906-16823002)
chr3 (173-249)||(14085709-14085785)
chr3 (103-171)||(19451256-19451322)
chr3 (173-249)||(49400709-49400785)
chr3 (1-38)||(49968952-49968989)
chr3 (72-124)||(13910512-13910564)
chr3 (72-124)||(13940968-13941020)
chr3 (72-124)||(13947457-13947509)
chr3 (72-124)||(14651890-14651942)
chr3 (110-249)||(11849473-11849611)
chr3 (161-211)||(3803913-3803962)
chr3 (103-165)||(13036112-13036172)
chr3 (71-124)||(11964087-11964140)
chr3 (173-249)||(14091110-14091186)
chr3 (181-249)||(16801147-16801215)
chr3 (173-249)||(17240382-17240458)
chr3 (181-249)||(20247657-20247725)
chr3 (170-279)||(9534436-9534549)
chr3 (72-124)||(12201182-12201234)
chr3 (72-124)||(13202715-13202767)
chr3 (180-226)||(8579135-8579182)
chr3 (165-204)||(12201272-12201311)
chr3 (157-203)||(12203341-12203388)
chr3 (72-131)||(13692903-13692962)
chr3 (71-138)||(15934082-15934149)
chr3 (71-138)||(15954087-15954154)
chr3 (181-279)||(54521876-54521977)
chr3 (159-223)||(178374-178442)
chr3 (103-168)||(19444690-19444753)
chr3 (98-131)||(11304911-11304944)
chr3 (179-238)||(30205502-30205562)
chr3 (72-129)||(54832381-54832438)
[»] chr8 (34 HSPs)
chr8 (109-308)||(21931737-21931934)
chr8 (103-308)||(33089894-33090099)
chr8 (103-308)||(25623615-25623822)
chr8 (103-308)||(22744720-22744926)
chr8 (172-287)||(23654435-23654553)
chr8 (161-279)||(22815433-22815556)
chr8 (103-169)||(20004806-20004870)
chr8 (71-124)||(22056700-22056753)
chr8 (72-124)||(22178569-22178621)
chr8 (173-249)||(18614382-18614458)
chr8 (109-146)||(19750590-19750627)
chr8 (179-223)||(20494254-20494299)
chr8 (71-124)||(22024725-22024778)
chr8 (173-249)||(23826318-23826394)
chr8 (72-124)||(1803655-1803707)
chr8 (72-124)||(9272325-9272377)
chr8 (170-206)||(22024646-22024682)
chr8 (103-138)||(21685206-21685241)
chr8 (103-138)||(21689555-21689590)
chr8 (165-204)||(22062651-22062690)
chr8 (159-223)||(15634988-15635056)
chr8 (258-308)||(19750751-19750800)
chr8 (71-131)||(19860495-19860555)
chr8 (103-177)||(20011198-20011275)
chr8 (161-223)||(21860426-21860492)
chr8 (3-38)||(20022126-20022161)
chr8 (161-211)||(21321082-21321133)
chr8 (179-228)||(32951002-32951053)
chr8 (173-226)||(23481942-23481996)
chr8 (98-131)||(16266001-16266034)
chr8 (179-226)||(19883049-19883098)
chr8 (71-124)||(22062728-22062781)
chr8 (164-216)||(25112069-25112122)
chr8 (109-138)||(28854852-28854881)
[»] chr5 (35 HSPs)
chr5 (103-308)||(21900816-21901020)
chr5 (103-227)||(21495882-21496006)
chr5 (103-199)||(10036133-10036227)
chr5 (106-247)||(23443249-23443389)
chr5 (106-308)||(18819898-18820093)
chr5 (103-279)||(15192978-15193159)
chr5 (103-169)||(21889573-21889637)
chr5 (72-124)||(20938576-20938628)
chr5 (72-124)||(22311975-22312027)
chr5 (72-124)||(22499718-22499770)
chr5 (161-279)||(24276332-24276457)
chr5 (161-279)||(24385756-24385881)
chr5 (173-249)||(22006757-22006833)
chr5 (72-169)||(25014542-25014637)
chr5 (181-279)||(9777219-9777320)
chr5 (103-138)||(43242497-43242532)
chr5 (167-227)||(23528749-23528810)
chr5 (179-223)||(30137884-30137929)
chr5 (68-131)||(598144-598207)
chr5 (80-124)||(757445-757489)
chr5 (72-124)||(17263937-17263989)
chr5 (72-124)||(17270419-17270471)
chr5 (161-223)||(17813576-17813642)
chr5 (170-279)||(19512494-19512607)
chr5 (72-124)||(22175987-22176039)
chr5 (170-279)||(28369888-28370001)
chr5 (103-134)||(26754497-26754528)
chr5 (158-216)||(26754763-26754822)
chr5 (179-223)||(21979960-21980006)
chr5 (181-226)||(22337647-22337693)
chr5 (181-226)||(22341185-22341231)
chr5 (170-249)||(41875461-41875541)
chr5 (98-131)||(19509081-19509114)
chr5 (173-229)||(22751253-22751310)
chr5 (2-43)||(30138062-30138103)
[»] scaffold0180 (2 HSPs)
scaffold0180 (110-308)||(13449-13644)
scaffold0180 (161-211)||(11731-11780)
[»] chr7 (51 HSPs)
chr7 (106-308)||(19152866-19153066)
chr7 (106-308)||(20752265-20752465)
chr7 (106-308)||(19146545-19146745)
chr7 (106-308)||(20745944-20746144)
chr7 (103-308)||(14249488-14249692)
chr7 (103-308)||(16475087-16475293)
chr7 (103-308)||(14264958-14265162)
chr7 (103-227)||(41780942-41781069)
chr7 (71-124)||(35961879-35961932)
chr7 (157-201)||(12555499-12555543)
chr7 (106-201)||(14168613-14168706)
chr7 (106-201)||(14172860-14172953)
chr7 (72-124)||(15339804-15339856)
chr7 (103-145)||(12695606-12695648)
chr7 (74-124)||(14287267-14287317)
chr7 (72-177)||(15143187-15143290)
chr7 (71-124)||(11219274-11219327)
chr7 (71-124)||(17181857-17181910)
chr7 (173-249)||(19617473-19617549)
chr7 (72-124)||(15722358-15722410)
chr7 (72-124)||(19600777-19600829)
chr7 (71-138)||(14580681-14580748)
chr7 (106-169)||(16073156-16073218)
chr7 (181-279)||(23663960-23664061)
chr7 (103-138)||(38829162-38829197)
chr7 (173-246)||(14113445-14113519)
chr7 (74-124)||(14280801-14280851)
chr7 (173-246)||(14423096-14423170)
chr7 (180-249)||(18873479-18873548)
chr7 (181-249)||(11304303-11304371)
chr7 (71-124)||(14129178-14129231)
chr7 (71-124)||(14136024-14136077)
chr7 (71-124)||(14432996-14433049)
chr7 (1-38)||(15140135-15140172)
chr7 (181-249)||(29797665-29797733)
chr7 (181-249)||(29801484-29801552)
chr7 (157-201)||(3328855-3328899)
chr7 (179-279)||(7530233-7530336)
chr7 (1-37)||(8135331-8135367)
chr7 (72-124)||(23200641-23200693)
chr7 (72-124)||(23506768-23506820)
chr7 (106-138)||(45186457-45186489)
chr7 (92-131)||(5186416-5186455)
chr7 (179-279)||(15726443-15726546)
chr7 (106-169)||(16069592-16069654)
chr7 (2-40)||(708521-708559)
chr7 (159-223)||(13898561-13898629)
chr7 (159-223)||(15214643-15214711)
chr7 (3-37)||(17070384-17070418)
chr7 (109-138)||(4994387-4994416)
chr7 (1-38)||(15095730-15095767)
[»] scaffold0266 (2 HSPs)
scaffold0266 (103-308)||(24011-24215)
scaffold0266 (106-308)||(13459-13660)
[»] scaffold0026 (3 HSPs)
scaffold0026 (103-308)||(143679-143881)
scaffold0026 (103-177)||(36578-36655)
scaffold0026 (161-216)||(121323-121379)
[»] scaffold0490 (1 HSPs)
scaffold0490 (109-303)||(5918-6114)
[»] scaffold0046 (1 HSPs)
scaffold0046 (103-308)||(71573-71777)
[»] scaffold0178 (1 HSPs)
scaffold0178 (103-310)||(26448-26655)
[»] scaffold0249 (1 HSPs)
scaffold0249 (103-308)||(5734-5941)
[»] scaffold0104 (2 HSPs)
scaffold0104 (103-308)||(40615-40818)
scaffold0104 (173-249)||(12907-12983)
[»] scaffold0309 (1 HSPs)
scaffold0309 (109-308)||(9174-9374)
[»] scaffold0583 (1 HSPs)
scaffold0583 (152-308)||(5489-5645)
[»] scaffold0462 (1 HSPs)
scaffold0462 (103-308)||(8183-8389)
[»] scaffold0008 (2 HSPs)
scaffold0008 (103-308)||(123885-124090)
scaffold0008 (179-223)||(11301-11346)
[»] scaffold0669 (1 HSPs)
scaffold0669 (106-308)||(717-917)
[»] scaffold0039 (2 HSPs)
scaffold0039 (106-307)||(2740-2940)
scaffold0039 (72-124)||(95729-95781)
[»] chr2 (31 HSPs)
chr2 (72-269)||(25268189-25268386)
chr2 (152-308)||(17634950-17635108)
chr2 (103-199)||(21120686-21120780)
chr2 (103-226)||(25364959-25365082)
chr2 (106-228)||(20649097-20649219)
chr2 (169-279)||(23086483-23086595)
chr2 (72-175)||(20913420-20913522)
chr2 (103-201)||(25106530-25106626)
chr2 (72-127)||(2106549-2106604)
chr2 (179-288)||(10038893-10039010)
chr2 (173-249)||(6743169-6743245)
chr2 (160-201)||(22861041-22861082)
chr2 (173-249)||(43694578-43694654)
chr2 (103-216)||(38928932-38929048)
chr2 (71-124)||(19702630-19702683)
chr2 (170-279)||(6483827-6483940)
chr2 (170-279)||(6487294-6487407)
chr2 (158-228)||(24272922-24272996)
chr2 (161-216)||(24944404-24944460)
chr2 (181-279)||(10683770-10683871)
chr2 (92-131)||(17582618-17582657)
chr2 (181-279)||(20262273-20262374)
chr2 (103-138)||(23149632-23149667)
chr2 (103-138)||(23561422-23561457)
chr2 (233-311)||(25351542-25351620)
chr2 (3-37)||(3539760-3539794)
chr2 (173-226)||(9243073-9243127)
chr2 (109-138)||(20590262-20590291)
chr2 (98-131)||(22012271-22012304)
chr2 (109-138)||(23338379-23338408)
chr2 (98-131)||(35243694-35243727)
[»] scaffold0165 (2 HSPs)
scaffold0165 (107-308)||(553-753)
scaffold0165 (103-203)||(18835-18934)
[»] chr6 (36 HSPs)
chr6 (103-308)||(23106209-23106415)
chr6 (103-177)||(22797607-22797679)
chr6 (72-169)||(18315072-18315168)
chr6 (71-124)||(22907886-22907939)
chr6 (72-124)||(933652-933704)
chr6 (72-124)||(19727588-19727640)
chr6 (161-216)||(8767115-8767171)
chr6 (170-279)||(12943233-12943346)
chr6 (72-124)||(21723901-21723953)
chr6 (72-124)||(33681397-33681449)
chr6 (103-138)||(7430624-7430659)
chr6 (161-264)||(22347586-22347688)
chr6 (161-211)||(1454-1503)
chr6 (161-211)||(8413-8462)
chr6 (181-249)||(2286635-2286703)
chr6 (71-124)||(2709331-2709384)
chr6 (103-203)||(18787090-18787189)
chr6 (71-124)||(19819850-19819903)
chr6 (170-246)||(23058051-23058128)
chr6 (180-279)||(25397292-25397394)
chr6 (72-124)||(1593711-1593763)
chr6 (161-216)||(14615340-14615396)
chr6 (1-37)||(19401016-19401052)
chr6 (179-279)||(1589615-1589718)
chr6 (2-41)||(18585728-18585767)
chr6 (103-138)||(22347514-22347549)
chr6 (103-138)||(29266374-29266409)
chr6 (181-279)||(29483266-29483367)
chr6 (159-215)||(16132326-16132386)
chr6 (166-226)||(933551-933612)
chr6 (161-279)||(1640051-1640174)
chr6 (110-223)||(5288980-5289093)
chr6 (98-131)||(10469888-10469921)
chr6 (98-131)||(13127436-13127469)
chr6 (1-38)||(28948496-28948533)
chr6 (179-215)||(31021634-31021671)
[»] scaffold0005 (3 HSPs)
scaffold0005 (106-308)||(17138-17340)
scaffold0005 (72-124)||(259655-259707)
scaffold0005 (72-124)||(266070-266122)
[»] chr4 (46 HSPs)
chr4 (106-308)||(14822369-14822571)
chr4 (71-124)||(16999309-16999362)
chr4 (157-201)||(17177414-17177458)
chr4 (72-177)||(10783379-10783483)
chr4 (106-207)||(16228185-16228285)
chr4 (71-124)||(14487570-14487623)
chr4 (161-279)||(18230833-18230956)
chr4 (72-124)||(14507177-14507229)
chr4 (72-124)||(23723942-23723994)
chr4 (72-124)||(43284045-43284097)
chr4 (72-177)||(10972030-10972134)
chr4 (74-124)||(40909384-40909434)
chr4 (164-249)||(43283921-43284007)
chr4 (109-177)||(8834936-8835002)
chr4 (161-211)||(14063781-14063832)
chr4 (106-169)||(14991729-14991790)
chr4 (106-169)||(15004237-15004298)
chr4 (180-249)||(16157906-16157975)
chr4 (159-223)||(20898644-20898712)
chr4 (103-169)||(30240038-30240102)
chr4 (181-249)||(2757449-2757517)
chr4 (71-124)||(11170389-11170442)
chr4 (160-201)||(13898771-13898812)
chr4 (71-124)||(41528234-41528287)
chr4 (72-124)||(16445907-16445959)
chr4 (72-124)||(20941242-20941294)
chr4 (72-124)||(23122582-23122634)
chr4 (3-38)||(9638933-9638968)
chr4 (179-228)||(15239715-15239766)
chr4 (179-228)||(15447275-15447326)
chr4 (181-279)||(15535235-15535336)
chr4 (179-279)||(16370570-16370672)
chr4 (165-204)||(20941332-20941371)
chr4 (179-228)||(28919778-28919829)
chr4 (179-228)||(33661492-33661543)
chr4 (181-279)||(49546782-49546883)
chr4 (179-228)||(13878881-13878930)
chr4 (103-137)||(13898848-13898882)
chr4 (173-226)||(18213880-18213934)
chr4 (71-129)||(49051932-49051990)
chr4 (98-131)||(5939839-5939872)
chr4 (98-131)||(7360160-7360193)
chr4 (182-229)||(13882489-13882538)
chr4 (179-223)||(16277174-16277219)
chr4 (161-198)||(17143339-17143376)
chr4 (109-138)||(38979941-38979970)
[»] scaffold0139 (1 HSPs)
scaffold0139 (103-308)||(1881-2083)
[»] scaffold0049 (2 HSPs)
scaffold0049 (103-199)||(42001-42095)
scaffold0049 (103-199)||(52696-52790)
[»] scaffold0042 (2 HSPs)
scaffold0042 (158-223)||(53921-53986)
scaffold0042 (159-223)||(52294-52362)
[»] scaffold0447 (2 HSPs)
scaffold0447 (179-279)||(7951-8053)
scaffold0447 (179-279)||(12565-12667)
[»] scaffold0383 (1 HSPs)
scaffold0383 (179-279)||(10560-10662)
[»] scaffold0201 (1 HSPs)
scaffold0201 (103-308)||(27313-27520)
[»] scaffold0057 (2 HSPs)
scaffold0057 (162-293)||(1023-1158)
scaffold0057 (103-138)||(1195-1230)
[»] scaffold0555 (1 HSPs)
scaffold0555 (103-177)||(2392-2464)
[»] scaffold0173 (1 HSPs)
scaffold0173 (103-201)||(2298-2394)
[»] scaffold0053 (3 HSPs)
scaffold0053 (103-169)||(72004-72068)
scaffold0053 (103-169)||(45833-45897)
scaffold0053 (170-223)||(78984-79038)
[»] scaffold0297 (1 HSPs)
scaffold0297 (103-308)||(739-933)
[»] scaffold0513 (1 HSPs)
scaffold0513 (109-177)||(8612-8678)
[»] scaffold0348 (2 HSPs)
scaffold0348 (72-124)||(3908-3960)
scaffold0348 (72-124)||(14654-14706)
[»] scaffold0239 (2 HSPs)
scaffold0239 (72-124)||(13639-13691)
scaffold0239 (72-124)||(6356-6408)
[»] scaffold0028 (4 HSPs)
scaffold0028 (103-163)||(91701-91761)
scaffold0028 (235-308)||(2222-2297)
scaffold0028 (173-249)||(45902-45978)
scaffold0028 (173-249)||(51306-51382)
[»] scaffold0326 (2 HSPs)
scaffold0326 (106-279)||(4374-4548)
scaffold0326 (106-279)||(19556-19730)
[»] scaffold0108 (1 HSPs)
scaffold0108 (72-159)||(46489-46573)
[»] scaffold0244 (2 HSPs)
scaffold0244 (103-169)||(14618-14682)
scaffold0244 (72-169)||(778-873)
[»] scaffold0101 (1 HSPs)
scaffold0101 (71-124)||(5923-5976)
[»] scaffold0023 (1 HSPs)
scaffold0023 (71-124)||(19658-19711)
[»] scaffold0790 (1 HSPs)
scaffold0790 (187-227)||(5576-5616)
[»] scaffold0556 (1 HSPs)
scaffold0556 (157-201)||(4070-4114)
[»] scaffold0106 (5 HSPs)
scaffold0106 (160-216)||(29586-29642)
scaffold0106 (160-249)||(37180-37272)
scaffold0106 (103-140)||(37110-37147)
scaffold0106 (173-249)||(39579-39655)
scaffold0106 (103-138)||(29516-29551)
[»] scaffold0071 (2 HSPs)
scaffold0071 (72-124)||(50112-50164)
scaffold0071 (159-219)||(52090-52154)
[»] scaffold0635 (1 HSPs)
scaffold0635 (179-288)||(8060-8177)
[»] scaffold0331 (2 HSPs)
scaffold0331 (106-207)||(19507-19607)
scaffold0331 (161-226)||(4800-4869)
[»] scaffold0054 (2 HSPs)
scaffold0054 (103-169)||(59550-59614)
scaffold0054 (103-169)||(61114-61177)
[»] scaffold0050 (1 HSPs)
scaffold0050 (106-287)||(13828-14009)
[»] scaffold0011 (4 HSPs)
scaffold0011 (103-201)||(147962-148058)
scaffold0011 (173-249)||(173484-173560)
scaffold0011 (157-201)||(155201-155245)
scaffold0011 (71-132)||(55907-55968)
[»] scaffold0518 (1 HSPs)
scaffold0518 (71-124)||(8449-8502)
[»] scaffold0456 (2 HSPs)
scaffold0456 (173-249)||(8188-8264)
scaffold0456 (173-249)||(1043-1119)
[»] scaffold0429 (1 HSPs)
scaffold0429 (167-204)||(224-261)
[»] scaffold0158 (1 HSPs)
scaffold0158 (71-120)||(15372-15421)
[»] scaffold0138 (1 HSPs)
scaffold0138 (235-308)||(12469-12544)
[»] scaffold0076 (3 HSPs)
scaffold0076 (173-249)||(29068-29144)
scaffold0076 (173-249)||(34469-34545)
scaffold0076 (160-201)||(50777-50818)
[»] scaffold1508 (1 HSPs)
scaffold1508 (72-124)||(1545-1597)
[»] scaffold0706 (2 HSPs)
scaffold0706 (161-216)||(2422-2478)
scaffold0706 (71-124)||(2514-2567)
[»] scaffold0213 (1 HSPs)
scaffold0213 (72-124)||(1-53)
[»] scaffold0114 (1 HSPs)
scaffold0114 (72-124)||(42896-42948)
[»] scaffold0335 (2 HSPs)
scaffold0335 (165-215)||(7559-7610)
scaffold0335 (103-138)||(7654-7689)
[»] scaffold0117 (2 HSPs)
scaffold0117 (161-238)||(21941-22021)
scaffold0117 (182-228)||(34618-34665)
[»] scaffold0091 (2 HSPs)
scaffold0091 (103-138)||(21899-21934)
scaffold0091 (103-138)||(26096-26131)
[»] scaffold0388 (1 HSPs)
scaffold0388 (179-228)||(14884-14934)
[»] scaffold0848 (1 HSPs)
scaffold0848 (1-38)||(2114-2151)
[»] scaffold0506 (1 HSPs)
scaffold0506 (71-124)||(9192-9245)
[»] scaffold0414 (1 HSPs)
scaffold0414 (161-274)||(934-1051)
[»] scaffold0146 (1 HSPs)
scaffold0146 (173-249)||(13742-13818)
[»] scaffold0058 (1 HSPs)
scaffold0058 (164-201)||(18546-18583)
[»] scaffold1290 (1 HSPs)
scaffold1290 (106-138)||(394-426)
[»] scaffold0607 (1 HSPs)
scaffold0607 (161-223)||(3886-3952)
[»] scaffold0600 (2 HSPs)
scaffold0600 (72-124)||(48-100)
scaffold0600 (141-190)||(804-857)
[»] scaffold0481 (1 HSPs)
scaffold0481 (161-223)||(567-633)
[»] scaffold0402 (1 HSPs)
scaffold0402 (106-138)||(15945-15977)
[»] scaffold0371 (1 HSPs)
scaffold0371 (186-279)||(8631-8726)
[»] scaffold0063 (1 HSPs)
scaffold0063 (72-124)||(25192-25244)
[»] scaffold0035 (1 HSPs)
scaffold0035 (75-123)||(346-394)
[»] scaffold0328 (1 HSPs)
scaffold0328 (3-38)||(18735-18770)
[»] scaffold0323 (1 HSPs)
scaffold0323 (170-201)||(8318-8349)
[»] scaffold0230 (1 HSPs)
scaffold0230 (2-41)||(6775-6814)
[»] scaffold0220 (1 HSPs)
scaffold0220 (3-38)||(13872-13907)
[»] scaffold0192 (1 HSPs)
scaffold0192 (103-138)||(21857-21892)
[»] scaffold0151 (1 HSPs)
scaffold0151 (179-228)||(10196-10247)
[»] scaffold0132 (2 HSPs)
scaffold0132 (179-228)||(3576-3627)
scaffold0132 (179-228)||(11536-11587)
[»] scaffold0096 (1 HSPs)
scaffold0096 (157-203)||(3933-3980)
[»] scaffold0034 (1 HSPs)
scaffold0034 (179-228)||(33828-33879)
[»] scaffold0004 (1 HSPs)
scaffold0004 (173-226)||(117006-117061)
[»] scaffold0413 (1 HSPs)
scaffold0413 (159-223)||(11748-11816)
[»] scaffold0337 (1 HSPs)
scaffold0337 (173-226)||(8659-8713)
[»] scaffold0102 (2 HSPs)
scaffold0102 (187-279)||(30897-30992)
scaffold0102 (98-131)||(11464-11497)
[»] scaffold0523 (1 HSPs)
scaffold0523 (98-131)||(6880-6913)
[»] scaffold0334 (1 HSPs)
scaffold0334 (179-222)||(2230-2275)
[»] scaffold0216 (1 HSPs)
scaffold0216 (179-223)||(22426-22471)
[»] scaffold0124 (1 HSPs)
scaffold0124 (173-223)||(34169-34221)
[»] scaffold0088 (1 HSPs)
scaffold0088 (98-131)||(32537-32570)
[»] scaffold0031 (2 HSPs)
scaffold0031 (109-138)||(121943-121972)
scaffold0031 (109-138)||(132819-132848)


Alignment Details
Target: chr1 (Bit Score: 128; Significance: 8e-66; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 128; E-Value: 8e-66
Query Start/End: Original strand, 103 - 308
Target Start/End: Original strand, 5381644 - 5381847
Alignment:
Q  103 agtaaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctcttctcccttgctcttggtttttctcccaaaactt 202  Q
    |||||||||||||||||||||||||||||||||||| |||||||  |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  5381644 agtaaacctcacccttaccttaattcagatgaacaagttctaca--aaatctggttctcttggctcttctcccttgttcttggtttttctcccaaaactt 5381741  T
Q  203 gttttacgtgaaactgcttctgactttctatttttcctaactcccaatattaact-ccctttatttcacttaactccctctcaatttctatttattctaa 301  Q
    ||||||||||||||||||| ||||||    |||||||||||||| | | |||||| |||||||||||| |||||||||||| || ||||||| |||||||    
T  5381742 gttttacgtgaaactgcttatgacttctcctttttcctaactcctattcttaactcccctttatttcatttaactccctcttaa-ttctattaattctaa 5381840  T
Q  302 tttaatc 308  Q
    |||||||    
T  5381841 tttaatc 5381847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 103 - 227
Target Start/End: Complemental strand, 21986061 - 21985937
Alignment:
Q  103 agtaaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctcttctcccttgctcttggtttttctcccaaaactt 202  Q
    ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  21986061 agtaaacctcacccttaccttaattcagatgaacaatctctacacaaaatctggttctcttggctcttctcccttgttcttggtttttctcccaaaactt 21985962  T
Q  203 gttttacgtgaaactgcttctgact 227  Q
    ||||||||||||||| ||| |||||    
T  21985961 gttttacgtgaaactacttatgact 21985937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 103 - 236
Target Start/End: Complemental strand, 21744760 - 21744626
Alignment:
Q  103 agtaaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctcttctcccttgctcttggtttttctcccaaaact- 201  Q
    |||||||||||||||||||||||||| |||||||||| ||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  21744760 agtaaacctcacccttaccttaattcggatgaacaatctctacactaaatctggttctcttggctcttctcccttgctcttggtttttctcccaaaactc 21744661  T
Q  202 tgttttacgtgaaactgcttctgactttctatttt 236  Q
    |||| ||||| |||| | |||||||||||| ||||    
T  21744660 tgttgtacgtaaaacagtttctgactttctctttt 21744626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 72 - 228
Target Start/End: Complemental strand, 21409867 - 21409710
Alignment:
Q  72 caaaatcagaattca-taacatatacaattgcagtaaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctctt 170  Q
    ||||||||||||||| |||| ||||| | || || |||||||||||||||||||||||||| | ||||| ||||   |||||| || |||||||||||||    
T  21409867 caaaatcagaattcaataac-tatactactgaagcaaacctcacccttaccttaattcagaaggacaatctctaacaaaaatccgggtctcttggctctt 21409769  T
Q  171 ctcccttgctcttggtttttctcccaaaacttgt-tttacgtgaaactgcttctgactt 228  Q
    |||||||||||||||||||||||||||||||||| | ||||| ||||||||||||||||    
T  21409768 ctcccttgctcttggtttttctcccaaaacttgtctgtacgtaaaactgcttctgactt 21409710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 72 - 228
Target Start/End: Original strand, 20850012 - 20850168
Alignment:
Q  72 caaaatcagaattca-taacatatacaattgcagtaaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctctt 170  Q
    ||||||||||||||| |||| ||||| | || || |||||||||||||||||||||||||| | |||| ||||||| ||  ||| |||||||||||||||    
T  20850012 caaaatcagaattcaataac-tatactactgaagcaaacctcacccttaccttaattcagaaggacaaattctacagaat-tcttgttctcttggctctt 20850109  T
Q  171 ctcccttgctcttggtttt-tctcccaaaacttgttttacgtgaaactgcttctgactt 228  Q
    |||||||| |||||||||| |||||||||||||||||||| | ||||||||||||||||    
T  20850110 ctcccttgttcttggttttctctcccaaaacttgttttacataaaactgcttctgactt 20850168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 106 - 308
Target Start/End: Complemental strand, 21733577 - 21733373
Alignment:
Q  106 aaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctcttctcccttgctcttggtttttctcccaaaa-ct-tg 203  Q
    |||||||| ||||||||||| |||||||||||| |||||||  |  ||||||||||||||||||||||||||| ||||||||| |||||||||| || ||    
T  21733577 aaacctcagccttaccttaaatcagatgaacaaattctacaggat-tctggttctcttggctcttctcccttgttcttggtttatctcccaaaagctctg 21733479  T
Q  204 ttttacgtgaaactgcttctgactttctatttttcctaactcccaata-ttaact--ccctttatttcacttaactccctctcaatttctatttattcta 300  Q
    || ||||| |||| | |||||||| |||  |||||||||||||||| | ||||||  ||||||||||||||||||||||||| || ||||||| ||| ||    
T  21733478 ttgtacgtaaaacaggttctgactatct-cttttcctaactcccaacacttaactccccctttatttcacttaactccctcttaa-ttctattaatttta 21733381  T
Q  301 atttaatc 308  Q
    ||| ||||    
T  21733380 attaaatc 21733373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 103 - 177
Target Start/End: Original strand, 41315248 - 41315320
Alignment:
Q  103 agtaaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctcttctccctt 177  Q
    |||||| ||||||||||||||||||||||||||||| ||||||| | ||||||||||||||||||||||||||||    
T  41315248 agtaaatctcacccttaccttaattcagatgaacaa-ttctaca-agaatctggttctcttggctcttctccctt 41315320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 71 - 124
Target Start/End: Complemental strand, 23065879 - 23065826
Alignment:
Q  71 tcaaaatcagaattcataacatatacaattgcagtaaacctcacccttacctta 124  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  23065879 tcaaaatcagaattcagaacctatacaattgcagtaaacctcacccttacctta 23065826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 106 - 279
Target Start/End: Complemental strand, 31926470 - 31926296
Alignment:
Q  106 aaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctcttctcccttgctct--tggtttttctcccaaaact-t 202  Q
    ||||||||||||||||||||||||||||||||||| | ||| |||||||||||| ||||||||| ||   | |||||  |  |||||||||||||||| |    
T  31926470 aaacctcacccttaccttaattcagatgaacaattgc-aca-aaaatctggttcacttggctctact---tggctcttctcctttttctcccaaaactct 31926376  T
Q  203 gtttt-acgtgaaactgc-ttctgactttctatttttcctaactcccaata-ttaact-ccctttatttcacttaactccc 279  Q
    ||||| |||| ||||||| |||||||| | |  ||||||||||||||||||  ||||| |||||||||||| |||||||||    
T  31926375 gttttcacgtaaaactgctttctgactgt-ttcttttcctaactcccaatacataactcccctttatttcatttaactccc 31926296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 106 - 279
Target Start/End: Original strand, 21699117 - 21699281
Alignment:
Q  106 aaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctcttctcccttgctcttggtttttctcccaaaact-tgt 204  Q
    ||||||||||||||||||||||||||||||||  | | ||| ||| |||||||| |||||||||||||||           ||||||||||||||| |||    
T  21699117 aaacctcacccttaccttaattcagatgaacagatgc-acagaaattctggttcacttggctcttctccc-----------ttttctcccaaaactctgt 21699204  T
Q  205 tttacgtgaaactgc-ttctgactttctatttttcctaact-cccaata-ttaact-ccctttatttcacttaactccc 279  Q
    | ||||||||||||| ||||||| ||||  ||||||||||| ||||||| |||||| |||||||||||| |||||||||    
T  21699205 tgtacgtgaaactgctttctgac-ttct-cttttcctaactccccaatacttaactcccctttatttcatttaactccc 21699281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 106 - 207
Target Start/End: Complemental strand, 11140273 - 11140173
Alignment:
Q  106 aaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctcttctcccttgctcttggtttt-tctcccaaaacttgt 204  Q
    |||||||||||||||||||| |||||||||| | | | ||| | |||  | |||||||||||||||||||||| |||||||||| ||||||||| |||||    
T  11140273 aaacctcacccttaccttaaatcagatgaacgaatgc-aca-acaattggattctcttggctcttctcccttgttcttggttttctctcccaaagcttgt 11140176  T
Q  205 ttt 207  Q
    |||    
T  11140175 ttt 11140173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 169
Target Start/End: Complemental strand, 30490607 - 30490543
Alignment:
Q  103 agtaaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctct 169  Q
    |||||||||||||||||||||||||||| ||||||||| | ||| |||||||||||| |||||||||    
T  30490607 agtaaacctcacccttaccttaattcagttgaacaattgc-aca-aaaatctggttcacttggctct 30490543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 71 - 124
Target Start/End: Original strand, 20243518 - 20243571
Alignment:
Q  71 tcaaaatcagaattcataacatatacaattgcagtaaacctcacccttacctta 124  Q
    |||||||||||||||| ||  ||||||||||| |||||||||||||||||||||    
T  20243518 tcaaaatcagaattcagaatctatacaattgcggtaaacctcacccttacctta 20243571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 71 - 124
Target Start/End: Complemental strand, 20595313 - 20595260
Alignment:
Q  71 tcaaaatcagaattcataacatatacaattgcagtaaacctcacccttacctta 124  Q
    |||||||||||||||| ||| || |||||||| |||||||||||||||||||||    
T  20595313 tcaaaatcagaattcagaacctaaacaattgcggtaaacctcacccttacctta 20595260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 173 - 249
Target Start/End: Original strand, 21543234 - 21543310
Alignment:
Q  173 cccttgctcttggtttt-tctcccaaaacttgttttacgtgaaactgcttctgactttctatttttcctaactcccaa 249  Q
    |||||| |||||||||| ||||||||||||||||| |||| |||||||||||||| || |  ||||||||||||||||    
T  21543234 cccttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacctt-ttcttttcctaactcccaa 21543310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 72 - 124
Target Start/End: Complemental strand, 954289 - 954237
Alignment:
Q  72 caaaatcagaattcataacatatacaattgcagtaaacctcacccttacctta 124  Q
    ||||||||||||| | ||| ||||||||||| |||||||||||||||||||||    
T  954289 caaaatcagaatttagaacctatacaattgcggtaaacctcacccttacctta 954237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 72 - 124
Target Start/End: Complemental strand, 3705966 - 3705914
Alignment:
Q  72 caaaatcagaattcataacatatacaattgcagtaaacctcacccttacctta 124  Q
    ||||||||||||||| ||| |||| |||||| |||||||||||||||||||||    
T  3705966 caaaatcagaattcagaacctatataattgcggtaaacctcacccttacctta 3705914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 228
Target Start/End: Original strand, 18271413 - 18271483
Alignment:
Q  161 cttggctcttctcc---cttgctcttggtttttctcccaaaacttgttttacgtgaaactgcttctgactt 228  Q
    ||||||||||||||   ||| |||||||||||||||||||||||  || ||||||||||||||||| ||||    
T  18271413 cttggctcttctcctagctttctcttggtttttctcccaaaactgtttgtacgtgaaactgcttctcactt 18271483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 228
Target Start/End: Original strand, 18276067 - 18276137
Alignment:
Q  161 cttggctcttctcc---cttgctcttggtttttctcccaaaacttgttttacgtgaaactgcttctgactt 228  Q
    ||||||||||||||   ||| |||||||||||||||||||||||  || ||||||||||||||||| ||||    
T  18276067 cttggctcttctcctagctttctcttggtttttctcccaaaactgtttgtacgtgaaactgcttctcactt 18276137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 103 - 138
Target Start/End: Complemental strand, 2332084 - 2332049
Alignment:
Q  103 agtaaacctcacccttaccttaattcagatgaacaa 138  Q
    ||||||||||||||||||||||||||||||||||||    
T  2332084 agtaaacctcacccttaccttaattcagatgaacaa 2332049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 180 - 245
Target Start/End: Original strand, 32651689 - 32651756
Alignment:
Q  180 tcttggtttt-tctcccaaaacttgtttt-acgtgaaactgcttctgactttctatttttcctaactc 245  Q
    |||||||||| |||||||||||||||||| |||| |||||||||||||| || | |||||||||||||    
T  32651689 tcttggttttctctcccaaaacttgttttcacgtaaaactgcttctgaccttttctttttcctaactc 32651756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 175 - 249
Target Start/End: Complemental strand, 42094903 - 42094829
Alignment:
Q  175 cttgctcttggtttt-tctcccaaaacttgttttacgtgaaactgcttctgactttctatttttcctaactcccaa 249  Q
    |||| |||||||||| ||||||||||||||||| |||| |||||||||||||| || |  ||||||||||||||||    
T  42094903 cttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacctt-ttcttttcctaactcccaa 42094829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 124
Target Start/End: Complemental strand, 22434154 - 22434104
Alignment:
Q  74 aaatcagaattcataacatatacaattgcagtaaacctcacccttacctta 124  Q
    ||||||||||||| ||  ||||||||||| |||||||||||||||||||||    
T  22434154 aaatcagaattcagaatctatacaattgcggtaaacctcacccttacctta 22434104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 124
Target Start/End: Complemental strand, 19777857 - 19777804
Alignment:
Q  71 tcaaaatcagaattcataacatatacaattgcagtaaacctcacccttacctta 124  Q
    |||||||||||||||| ||   ||||||||| ||||||||||||||||||||||    
T  19777857 tcaaaatcagaattcagaatcaatacaattgaagtaaacctcacccttacctta 19777804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 106 - 138
Target Start/End: Original strand, 19336785 - 19336817
Alignment:
Q  106 aaacctcacccttaccttaattcagatgaacaa 138  Q
    |||||||||||||||||||||||||||||||||    
T  19336785 aaacctcacccttaccttaattcagatgaacaa 19336817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 72 - 124
Target Start/End: Original strand, 27281174 - 27281226
Alignment:
Q  72 caaaatcagaattcataacatatacaattgcagtaaacctcacccttacctta 124  Q
    ||||||||||||||| ||| ||||  ||||| |||||||||||||||||||||    
T  27281174 caaaatcagaattcagaacctataagattgcggtaaacctcacccttacctta 27281226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 29553560 - 29553504
Alignment:
Q  161 cttggctcttctcccttgctcttggtttt-tctcccaaaacttgttttacgtgaaac 216  Q
    ||||||||| |||||||| |||||||||| ||||||||||||||||| |||| ||||    
T  29553560 cttggctctcctcccttgttcttggttttctctcccaaaacttgtttcacgtaaaac 29553504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 38
Target Start/End: Complemental strand, 8276118 - 8276083
Alignment:
Q  3 ttaaatcaaccaattacaacttataaacctaattcc 38  Q
    |||||||||||||||||||||| |||||||||||||    
T  8276118 ttaaatcaaccaattacaacttctaaacctaattcc 8276083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 169
Target Start/End: Original strand, 23634531 - 23634592
Alignment:
Q  106 aaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctct 169  Q
    |||||||||||||||||||||| |||||||||| | | ||| |||||||||||| |||||||||    
T  23634531 aaacctcacccttaccttaatttagatgaacaaatgc-aca-aaaatctggttcacttggctct 23634592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 169
Target Start/End: Original strand, 23713214 - 23713275
Alignment:
Q  106 aaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctct 169  Q
    |||||||||||||||||||||||| |||||||| | | ||| |||||||||||| |||||||||    
T  23713214 aaacctcacccttaccttaattcaaatgaacaaatgc-aca-aaaatctggttcacttggctct 23713275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 138
Target Start/End: Original strand, 24960893 - 24960928
Alignment:
Q  103 agtaaacctcacccttaccttaattcagatgaacaa 138  Q
    ||||||||||||||||||||||||||||| ||||||    
T  24960893 agtaaacctcacccttaccttaattcagacgaacaa 24960928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 38
Target Start/End: Complemental strand, 38056801 - 38056766
Alignment:
Q  3 ttaaatcaaccaattacaacttataaacctaattcc 38  Q
    |||||||||||||||||||||| |||||||||||||    
T  38056801 ttaaatcaaccaattacaacttctaaacctaattcc 38056766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 131
Target Start/End: Original strand, 48428811 - 48428850
Alignment:
Q  92 tatacaattgcagtaaacctcacccttaccttaattcaga 131  Q
    ||||| |||| |||||||||||||||||||||||||||||    
T  48428811 tatactattgaagtaaacctcacccttaccttaattcaga 48428850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 183 - 249
Target Start/End: Original strand, 16373089 - 16373153
Alignment:
Q  183 tggtttttctcccaaaacttgttttacgtgaaactgcttctgactttctatttttcctaactcccaa 249  Q
    |||||||||||||||| ||||||| |||| |||||||||||||| || |  ||||||||||||||||    
T  16373089 tggtttttctcccaaa-cttgtttcacgtaaaactgcttctgacctt-ttcttttcctaactcccaa 16373153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 159 - 223
Target Start/End: Original strand, 21660459 - 21660527
Alignment:
Q  159 ctcttggctcttctcc---cttgctcttggtttttctcccaaaacttgttt-tacgtgaaactgcttct 223  Q
    ||||||||||||||||   ||| |||||||||||||||||||||  |||||  ||||||||||||||||    
T  21660459 ctcttggctcttctcctagctttctcttggtttttctcccaaaaactgtttccacgtgaaactgcttct 21660527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 164 - 198
Target Start/End: Complemental strand, 23065788 - 23065754
Alignment:
Q  164 ggctcttctcccttgctcttggtttttctcccaaa 198  Q
    ||||| |||||||||||||||||||||||||||||    
T  23065788 ggctcctctcccttgctcttggtttttctcccaaa 23065754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 51324426 - 51324468
Alignment:
Q  1 tattaaatcaaccaattacaacttataaacctaattcctaatt 43  Q
    ||||||| |||||||||||||||| ||||||||||||| ||||    
T  51324426 tattaaaacaaccaattacaacttttaaacctaattcccaatt 51324468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 138
Target Start/End: Original strand, 297399 - 297428
Alignment:
Q  109 cctcacccttaccttaattcagatgaacaa 138  Q
    ||||||||||||||||||||||||||||||    
T  297399 cctcacccttaccttaattcagatgaacaa 297428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 131
Target Start/End: Complemental strand, 19045453 - 19045420
Alignment:
Q  98 attgcagtaaacctcacccttaccttaattcaga 131  Q
    |||| |||||||||||||||||||||||||||||    
T  19045453 attgaagtaaacctcacccttaccttaattcaga 19045420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 223
Target Start/End: Complemental strand, 19663462 - 19663410
Alignment:
Q  173 cccttgctcttggtt--tttctcccaaaacttgttttacgtgaaactgcttct 223  Q
    |||||| ||||||||  ||||||||||||||||||| |||| |||||||||||    
T  19663462 cccttgttcttggttcttttctcccaaaacttgtttcacgtaaaactgcttct 19663410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 131
Target Start/End: Complemental strand, 20396068 - 20396035
Alignment:
Q  98 attgcagtaaacctcacccttaccttaattcaga 131  Q
    |||| |||||||||||||||||||||||||||||    
T  20396068 attgaagtaaacctcacccttaccttaattcaga 20396035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 228
Target Start/End: Original strand, 20902237 - 20902286
Alignment:
Q  181 cttggtttttctcccaaaact-tgttttacgtga-aactgcttctgactt 228  Q
    ||||||||||||||||||||| |||| ||||||| |||||||||||||||    
T  20902237 cttggtttttctcccaaaactctgttgtacgtgacaactgcttctgactt 20902286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 138
Target Start/End: Original strand, 45308191 - 45308220
Alignment:
Q  109 cctcacccttaccttaattcagatgaacaa 138  Q
    ||||||||||||||||||||||||||||||    
T  45308191 cctcacccttaccttaattcagatgaacaa 45308220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 124; Significance: 2e-63; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 103 - 308
Target Start/End: Original strand, 13627 - 13828
Alignment:
Q  103 agtaaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctcttctcccttgctcttggtttttctcccaaaactt 202  Q
    |||||||||||||||||||||| |||||||||| ||| |||||| ||  | || |||||||||||||||||||||| |||||||||||||||||||||||    
T  13627 agtaaacctcacccttacctta-ttcagatgaaaaatctctacagaa--tgtgattctcttggctcttctcccttgttcttggtttttctcccaaaactt 13723  T
Q  203 gttttacgtgaaactgcttctgactttctatttttcctaactcccaata-ttaactccctttatttcacttaactccctctcaatttctatttattctaa 301  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||||||||||| |||||||||||| || ||||||| |||||||    
T  13724 gttttacgtgaaactgcttctgactttct-cttttcctaactcccaatacttaactccctttatttcatttaactccctcttaa-ttctattaattctaa 13821  T
Q  302 tttaatc 308  Q
    |||||||    
T  13822 tttaatc 13828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 173 - 226
Target Start/End: Original strand, 34552 - 34606
Alignment:
Q  173 cccttgctcttggtttt-tctcccaaaacttgttttacgtgaaactgcttctgac 226  Q
    |||||| ||||| |||| ||||||||||||||||| |||| ||||||||||||||    
T  34552 cccttgttcttgattttctctcccaaaacttgtttcacgtaaaactgcttctgac 34606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 123; Significance: 8e-63; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 103 - 308
Target Start/End: Complemental strand, 14288201 - 14287997
Alignment:
Q  103 agtaaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctcttctcccttgctcttggtttttctcccaaaactt 202  Q
    |||||||||||||||||||||||||||||||||||| ||||||| ||| |||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  14288201 agtaaacctcacccttaccttaattcagatgaacaaattctacagaaa-tctgtttctcttggctcttctcccttgttcttggtttttctcccaaaactt 14288103  T
Q  203 gttttacgtgaaactgcttctgactttctatttttcctaactcccaatattaact-ccctttatttcacttaactccctctcaatttctatttattctaa 301  Q
    ||||||||||||||||||||| ||||    |||||||||||||| | | |||||| |||||||||||| |||||||||||| || ||||||| |||||||    
T  14288102 gttttacgtgaaactgcttctaacttctcctttttcctaactcctattcttaactcccctttatttcaattaactccctcttaa-ttctattaattctaa 14288004  T
Q  302 tttaatc 308  Q
    |||||||    
T  14288003 tttaatc 14287997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 103 - 261
Target Start/End: Original strand, 35985698 - 35985855
Alignment:
Q  103 agtaaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctcttctcccttgctcttggtttttctcccaaaactt 202  Q
    ||||||||||||||||||||||||||||||||||||  |||||| ||| ||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  35985698 agtaaacctcacccttaccttaattcagatgaacaaactctacagaaa-tctggttctcttgactcttctcccttgttcttggtttttctcccaaaactt 35985796  T
Q  203 gttttacgtgaaactgcttctgactttctatttttcctaactcccaatattaactccct 261  Q
    |||||||||||||||| |||||||||    |||||||||||||| | | ||||||||||    
T  35985797 gttttacgtgaaactgtttctgacttctcctttttcctaactcctattcttaactccct 35985855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 106 - 308
Target Start/End: Original strand, 42110205 - 42110408
Alignment:
Q  106 aaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctcttctcccttgctcttggtttttctcccaaaact-tgt 204  Q
    |||||||||||||||||||| |||||||||||| |||||||  |  |||||||||||||||||||||||| || |||||||||||||||||||||| |||    
T  42110205 aaacctcacccttaccttaaatcagatgaacaaattctacaggat-tctggttctcttggctcttctcccctgttcttggtttttctcccaaaactctgt 42110303  T
Q  205 tttacgtgaaactgcttctgactttctatttttcctaactcccaata-ttaact--ccctttatttcacttaactccctctcaatttctatttattctaa 301  Q
    | ||||| |||| | ||||||||||||  |||||||||||||||| | ||||||  |||||||||||||||||| |||||| || ||||||| |||||||    
T  42110304 tgtacgtaaaacagtttctgactttct-cttttcctaactcccaacacttaactccccctttatttcacttaaccccctcttaa-ttctattaattctaa 42110401  T
Q  302 tttaatc 308  Q
    || ||||    
T  42110402 ttaaatc 42110408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 103 - 227
Target Start/End: Complemental strand, 24283611 - 24283490
Alignment:
Q  103 agtaaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctcttctcccttgctcttggtttttctcccaaaactt 202  Q
    ||||||||||||||||||||||||||||||||| ||| |||||| ||  |||| |||||||||||||||||||||| |||||||||||||||| ||||||    
T  24283611 agtaaacctcacccttaccttaattcagatgaaaaatctctacagaa--tctgattctcttggctcttctcccttgttcttggtttttctccc-aaactt 24283515  T
Q  203 gttttacgtgaaactgcttctgact 227  Q
    |||||||||||||||||||||||||    
T  24283514 gttttacgtgaaactgcttctgact 24283490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 72 - 279
Target Start/End: Complemental strand, 12536932 - 12536725
Alignment:
Q  72 caaaatcagaattca-taacatatacaattgcagtaaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctctt 170  Q
    ||||||||||||||| |||| || || |||| || |||||||||||||||||||||||||| | ||||| |||| | |||||| || |||||||||||||    
T  12536932 caaaatcagaattcaataac-tacactattgaagcaaacctcacccttaccttaattcagaaggacaatctcta-acaaaatccgggtctcttggctctt 12536835  T
Q  171 ctcccttgctcttggtttttctcccaaaacttgt-tttacgtgaaactgcttctgactttctatttttcctaact-cccaatattaactc-cctttattt 267  Q
    |||||||||||||||||||||||||||||||||| | || || |||    ||||||| ||||  ||||||||||| |||||||||||||| |||||||||    
T  12536834 ctcccttgctcttggtttttctcccaaaacttgtctgtatgtaaaagcagttctgac-ttct-cttttcctaactccccaatattaactctcctttattt 12536737  T
Q  268 cacttaactccc 279  Q
    || |||||||||    
T  12536736 catttaactccc 12536725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 185 - 308
Target Start/End: Original strand, 13062446 - 13062569
Alignment:
Q  185 gtttttctcccaaaacttgttt-tacgtgaaactgcttctgactttctatttttcctaactcccaatattaactc-cctttatttcacttaactccctct 282  Q
    |||||||| |||||||||| || ||||| |||||||||||||||| || |||||||||||||| | |||||||||  |||||||||| ||||| ||||||    
T  13062446 gtttttctgccaaaacttgattgtacgtaaaactgcttctgactt-ctctttttcctaactcctattattaactcaactttatttcatttaaccccctct 13062544  T
Q  283 caatttctatttattctaatttaatc 308  Q
     || ||||||| ||| ||||||||||    
T  13062545 taa-ttctattaattttaatttaatc 13062569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 103 - 199
Target Start/End: Complemental strand, 14647054 - 14646967
Alignment:
Q  103 agtaaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctcttctcccttgctcttggtttttctcccaaaa 199  Q
    ||||||||||||||||||||||||||||||||| || |||  || |||||||| |||||||||||||||       |||||||||||||||||||||    
T  14647054 agtaaacctcacccttaccttaattcagatgaagaaattc--cacaaaatctgattctcttggctcttc-------ctcttggtttttctcccaaaa 14646967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 124
Target Start/End: Original strand, 14293685 - 14293738
Alignment:
Q  71 tcaaaatcagaattcataacatatacaattgcagtaaacctcacccttacctta 124  Q
    |||||||||||||||| ||  |||||||||||||||||||||||||||||||||    
T  14293685 tcaaaatcagaattcagaatctatacaattgcagtaaacctcacccttacctta 14293738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 124
Target Start/End: Original strand, 14299312 - 14299365
Alignment:
Q  71 tcaaaatcagaattcataacatatacaattgcagtaaacctcacccttacctta 124  Q
    |||||||||||||||| ||  |||||||||||||||||||||||||||||||||    
T  14299312 tcaaaatcagaattcagaatctatacaattgcagtaaacctcacccttacctta 14299365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 72 - 124
Target Start/End: Complemental strand, 16382109 - 16382057
Alignment:
Q  72 caaaatcagaattcataacatatacaattgcagtaaacctcacccttacctta 124  Q
    ||||||||||||||| ||| ||||||||||| |||||||||||||||||||||    
T  16382109 caaaatcagaattcagaacctatacaattgcggtaaacctcacccttacctta 16382057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 72 - 124
Target Start/End: Complemental strand, 16829170 - 16829118
Alignment:
Q  72 caaaatcagaattcataacatatacaattgcagtaaacctcacccttacctta 124  Q
    ||||||||||||||| ||| ||||||||||| |||||||||||||||||||||    
T  16829170 caaaatcagaattcagaacctatacaattgcggtaaacctcacccttacctta 16829118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 72 - 124
Target Start/End: Complemental strand, 16837692 - 16837640
Alignment:
Q  72 caaaatcagaattcataacatatacaattgcagtaaacctcacccttacctta 124  Q
    ||||||||||||||| ||| ||||||||||| |||||||||||||||||||||    
T  16837692 caaaatcagaattcagaacctatacaattgcggtaaacctcacccttacctta 16837640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 71 - 169
Target Start/End: Complemental strand, 16823002 - 16822906
Alignment:
Q  71 tcaaaatcagaattcataacatatacaattgcagtaaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctct 169  Q
    |||||||||||||  | ||  ||||| |||| || |||||||||| |||||||||||||||||||||||| | ||| |||||||||||| |||||||||    
T  16823002 tcaaaatcagaataaaaaatgtatactattgaagcaaacctcaccattaccttaattcagatgaacaattgc-aca-aaaatctggttcacttggctct 16822906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 173 - 249
Target Start/End: Original strand, 14085709 - 14085785
Alignment:
Q  173 cccttgctcttggtttt-tctcccaaaacttgttttacgtgaaactgcttctgactttctatttttcctaactcccaa 249  Q
    |||||| |||||||||| ||||||||||||||||| |||| |||||||||||||| || |  ||||||||||||||||    
T  14085709 cccttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacctt-ttcttttcctaactcccaa 14085785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 103 - 171
Target Start/End: Original strand, 19451256 - 19451322
Alignment:
Q  103 agtaaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctcttc 171  Q
    ||||||| ||||||||||||||||||||||||| || |||  || |||||||| |||||||||||||||    
T  19451256 agtaaacttcacccttaccttaattcagatgaagaaattc--cacaaaatctgattctcttggctcttc 19451322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 173 - 249
Target Start/End: Original strand, 49400709 - 49400785
Alignment:
Q  173 cccttgctcttggtttt-tctcccaaaacttgttttacgtgaaactgcttctgactttctatttttcctaactcccaa 249  Q
    |||||| |||||||||| ||||||||||||||||| |||| |||||||||||||| || |  ||||||||||||||||    
T  49400709 cccttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacctt-ttcttttcctaactcccaa 49400785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 49968989 - 49968952
Alignment:
Q  1 tattaaatcaaccaattacaacttataaacctaattcc 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  49968989 tattaaatcaaccaattacaacttataaacctaattcc 49968952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 72 - 124
Target Start/End: Original strand, 13910512 - 13910564
Alignment:
Q  72 caaaatcagaattcataacatatacaattgcagtaaacctcacccttacctta 124  Q
    ||||||||||||||| ||| |||| |||||| |||||||||||||||||||||    
T  13910512 caaaatcagaattcagaacctatagaattgcggtaaacctcacccttacctta 13910564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 72 - 124
Target Start/End: Original strand, 13940968 - 13941020
Alignment:
Q  72 caaaatcagaattcataacatatacaattgcagtaaacctcacccttacctta 124  Q
    ||||||||||||||| ||| |||| |||||| |||||||||||||||||||||    
T  13940968 caaaatcagaattcagaacctatagaattgcggtaaacctcacccttacctta 13941020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 72 - 124
Target Start/End: Original strand, 13947457 - 13947509
Alignment:
Q  72 caaaatcagaattcataacatatacaattgcagtaaacctcacccttacctta 124  Q
    ||||||||||||||| ||| |||| |||||| |||||||||||||||||||||    
T  13947457 caaaatcagaattcagaacctatagaattgcggtaaacctcacccttacctta 13947509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 72 - 124
Target Start/End: Complemental strand, 14651942 - 14651890
Alignment:
Q  72 caaaatcagaattcataacatatacaattgcagtaaacctcacccttacctta 124  Q
    |||||| |||||||| ||| ||||||||||| |||||||||||||||||||||    
T  14651942 caaaattagaattcagaacctatacaattgcggtaaacctcacccttacctta 14651890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 110 - 249
Target Start/End: Complemental strand, 11849611 - 11849473
Alignment:
Q  110 ctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctcttctcccttg---ctcttggtttttctc-ccaaaacttgtt 205  Q
    |||||||||||||||||| ||| ||| |||| | ||| ||| |||||||| |||||||||   ||||||   |||||| |||| ||| ||||||||||||    
T  11849611 ctcacccttaccttaatttagaagaataattccaacagaaa-tctggttcacttggctct---cccttggttctcttgcttttcctctccaaaacttgtt 11849516  T
Q  206 ttacgtgaaactgcttctgactttctatttttcctaactcccaa 249  Q
    ||||||  ||||||||||||| || |  ||||||||||||||||    
T  11849515 ttacgtacaactgcttctgacctt-ttcttttcctaactcccaa 11849473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 211
Target Start/End: Original strand, 3803913 - 3803962
Alignment:
Q  161 cttggctcttctcccttgctcttggtttttctcccaaaacttgttttacgt 211  Q
    |||||||||||||||||| |||||||||||||||| ||||||||| |||||    
T  3803913 cttggctcttctcccttgttcttggtttttctccc-aaacttgttgtacgt 3803962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 165
Target Start/End: Complemental strand, 13036172 - 13036112
Alignment:
Q  103 agtaaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttgg 165  Q
    |||||||||||  |||||||| |||||||||||||| ||||||| ||||||||||||||||||    
T  13036172 agtaaacctcattcttaccttgattcagatgaacaa-ttctaca-aaaatctggttctcttgg 13036112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 124
Target Start/End: Complemental strand, 11964140 - 11964087
Alignment:
Q  71 tcaaaatcagaattcataacatatacaattgcagtaaacctcacccttacctta 124  Q
    |||||||||||||||| ||  || ||||||| ||||||||||||||||||||||    
T  11964140 tcaaaatcagaattcagaatctacacaattgaagtaaacctcacccttacctta 11964087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 249
Target Start/End: Original strand, 14091110 - 14091186
Alignment:
Q  173 cccttgctcttggtttt-tctcccaaaacttgttttacgtgaaactgcttctgactttctatttttcctaactcccaa 249  Q
    |||||| |||||||||| ||||||||||||||||| |||| ||||| |||||||| || |  ||||||||||||||||    
T  14091110 cccttgttcttggttttctctcccaaaacttgtttcacgtaaaactacttctgacctt-ttcttttcctaactcccaa 14091186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 249
Target Start/End: Original strand, 16801147 - 16801215
Alignment:
Q  181 cttggtttt-tctcccaaaacttgttttacgtgaaactgcttctgactttctatttttcctaactcccaa 249  Q
    ||||||||| ||||||||||||||||| |||| |||||||||||||| || |  ||||||||||||||||    
T  16801147 cttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacctt-ttcttttcctaactcccaa 16801215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 249
Target Start/End: Complemental strand, 17240458 - 17240382
Alignment:
Q  173 cccttgctcttggtttt-tctcccaaaacttgttttacgtgaaactgcttctgactttctatttttcctaactcccaa 249  Q
    |||||| |||||||||| ||||||||||||||||| |||| ||||||||||| || || |  ||||||||||||||||    
T  17240458 cccttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttcttacatt-ttcttttcctaactcccaa 17240382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 249
Target Start/End: Complemental strand, 20247725 - 20247657
Alignment:
Q  181 cttggtttt-tctcccaaaacttgttttacgtgaaactgcttctgactttctatttttcctaactcccaa 249  Q
    ||||||||| ||||||||||||||||| |||| |||||||||||||| || |  ||||||||||||||||    
T  20247725 cttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacctt-ttcttttcctaactcccaa 20247657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 170 - 279
Target Start/End: Original strand, 9534436 - 9534549
Alignment:
Q  170 tctcccttgctcttggtttttc--tcccaaaacttgttttacgtgaaactgcttctgactttctatttttcctaactcccaatat-taactc--ccttta 264  Q
    |||||||||  |||||||||||  ||||||||||||||| |||| ||||||||||| || || |  |||||||||||||||| || ||||||  ||||||    
T  9534436 tctcccttgtccttggtttttccctcccaaaacttgtttcacgtaaaactgcttctaacctt-ttcttttcctaactcccaaaatataactcctccttta 9534534  T
Q  265 tttcacttaactccc 279  Q
    ||||| | |||||||    
T  9534535 tttcattaaactccc 9534549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 72 - 124
Target Start/End: Original strand, 12201182 - 12201234
Alignment:
Q  72 caaaatcagaattcataacatatacaattgcagtaaacctcacccttacctta 124  Q
    ||||||||||||||| ||| ||||  ||||| |||||||||||||||||||||    
T  12201182 caaaatcagaattcagaacctataagattgcggtaaacctcacccttacctta 12201234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 72 - 124
Target Start/End: Complemental strand, 13202767 - 13202715
Alignment:
Q  72 caaaatcagaattcataacatatacaattgcagtaaacctcacccttacctta 124  Q
    ||||||||||||||| ||| ||||  ||||| |||||||||||||||||||||    
T  13202767 caaaatcagaattcagaacctataagattgcggtaaacctcacccttacctta 13202715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 226
Target Start/End: Complemental strand, 8579182 - 8579135
Alignment:
Q  180 tcttggtttt-tctcccaaaacttgttttacgtgaaactgcttctgac 226  Q
    |||||||||| ||||||||||||||||| |||| ||||||||||||||    
T  8579182 tcttggttttctctcccaaaacttgtttgacgtaaaactgcttctgac 8579135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 204
Target Start/End: Original strand, 12201272 - 12201311
Alignment:
Q  165 gctcttctcccttgctcttggtttttctcccaaaacttgt 204  Q
    |||| |||||||||||||||| ||||||||||||||||||    
T  12201272 gctcctctcccttgctcttggcttttctcccaaaacttgt 12201311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 203
Target Start/End: Original strand, 12203341 - 12203388
Alignment:
Q  157 ttctcttggctcttctcccttgctcttggtttt-tctcccaaaacttg 203  Q
    |||||||||||||||||||||| |||||||||| ||||||||| ||||    
T  12203341 ttctcttggctcttctcccttgttcttggttttctctcccaaagcttg 12203388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 131
Target Start/End: Original strand, 13692903 - 13692962
Alignment:
Q  72 caaaatcagaattcataacatatacaattgcagtaaacctcacccttaccttaattcaga 131  Q
    |||||||||||||||| |   |||| |||| || ||||||||||||||||||||||||||    
T  13692903 caaaatcagaattcattaaccatactattgaagcaaacctcacccttaccttaattcaga 13692962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 138
Target Start/End: Complemental strand, 15934149 - 15934082
Alignment:
Q  71 tcaaaatcagaattcataacatatacaattgcagtaaacctcacccttaccttaattcagatgaacaa 138  Q
    ||||||||||||||||  |  ||||| | || || |||||||||||||||||||||||||| ||||||    
T  15934149 tcaaaatcagaattcaacatctatactactgaagcaaacctcacccttaccttaattcagacgaacaa 15934082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 138
Target Start/End: Complemental strand, 15954154 - 15954087
Alignment:
Q  71 tcaaaatcagaattcataacatatacaattgcagtaaacctcacccttaccttaattcagatgaacaa 138  Q
    ||||||||||||||||  |  ||||| | || || |||||||||||||||||||||||||| ||||||    
T  15954154 tcaaaatcagaattcaacatctatactactgaagcaaacctcacccttaccttaattcagacgaacaa 15954087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 279
Target Start/End: Original strand, 54521876 - 54521977
Alignment:
Q  181 cttggtttt-tctcccaaaacttgttttacgtgaaactgcttctgactttctatttttcctaactcccaatat-taactc--cctttatttcacttaact 276  Q
    ||||||||| ||||||||||||||||| |||| ||||||||||| || || |  |||||||||||||||| || ||||||  ||||||||||| | ||||    
T  54521876 cttggttttctctcccaaaacttgtttcacgtaaaactgcttctaacctt-ttcttttcctaactcccaaaatataactcctcctttatttcattaaact 54521974  T
Q  277 ccc 279  Q
    |||    
T  54521975 ccc 54521977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 159 - 223
Target Start/End: Complemental strand, 178442 - 178374
Alignment:
Q  159 ctcttggctcttctcc---cttgctcttggtttttctcccaaaacttgtttt-acgtgaaactgcttct 223  Q
    ||||||||||||||||   ||| |||||||||||||||||||||  |||||| ||||||||||| ||||    
T  178442 ctcttggctcttctcctagctttctcttggtttttctcccaaaaactgttttcacgtgaaactgtttct 178374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 103 - 168
Target Start/End: Original strand, 19444690 - 19444753
Alignment:
Q  103 agtaaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctc 168  Q
    ||||||| ||||||||||||||||||||||||| || |||  || ||||| || ||||||||||||    
T  19444690 agtaaacatcacccttaccttaattcagatgaagaaattc--cacaaaatttgattctcttggctc 19444753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 131
Target Start/End: Complemental strand, 11304944 - 11304911
Alignment:
Q  98 attgcagtaaacctcacccttaccttaattcaga 131  Q
    |||| |||||||||||||||||||||||||||||    
T  11304944 attgaagtaaacctcacccttaccttaattcaga 11304911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 238
Target Start/End: Complemental strand, 30205562 - 30205502
Alignment:
Q  179 ctcttggtttttctcccaaaactt-gttttacgtg-aaactgcttctgactttctatttttc 238  Q
    |||||||||||||||||||||||| ||| |||||| ||||||||| |||| |||||||||||    
T  30205562 ctcttggtttttctcccaaaacttagttgtacgtgaaaactgcttttgac-ttctatttttc 30205502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 129
Target Start/End: Complemental strand, 54832438 - 54832381
Alignment:
Q  72 caaaatcagaattcataacatatacaattgcagtaaacctcacccttaccttaattca 129  Q
    ||||||||||||| | ||  || || |||| |||||||||||||||||||||||||||    
T  54832438 caaaatcagaatttaaaatctacactattgaagtaaacctcacccttaccttaattca 54832381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 121; Significance: 1e-61; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 109 - 308
Target Start/End: Original strand, 21931737 - 21931934
Alignment:
Q  109 cctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctcttctcccttgctcttggtttttctcccaaaacttgtttta 208  Q
    ||||||||||||||||||||||||||| ||   ||||| ||||||||||||||||| ||||||||||||| ||||| |||||||||||||||||||||||    
T  21931737 cctcacccttaccttaattcagatgaaaaaaccctaca-aaaatctggttctcttgactcttctcccttgttcttgatttttctcccaaaacttgtttta 21931835  T
Q  209 cgtgaaactgcttctgactttctatttttcctaactcccaata-ttaactccctttatttcacttaactccctctcaatttctatttattctaatttaat 307  Q
    ||||||||||||| |||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||| ||||||||| |||    
T  21931836 cgtgaaactgcttttgactttct-cttttcctaactcccaatacttaactccctttatttcacttaactccctcttaa-ttctattaattctaattaaat 21931933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 103 - 308
Target Start/End: Original strand, 33089894 - 33090099
Alignment:
Q  103 agtaaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctcttctcccttgctcttggtttttctcccaaaac-t 201  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||  || ||||||||||||||||||||||||||| ||||||||||||||||||||| |    
T  33089894 agtaaacctcacccttaccttaaatcagatgaacaatctctaca--aattctggttctcttggctcttctcccttgttcttggtttttctcccaaaactt 33089991  T
Q  202 tgttttacgtgaaactgcttctgactttctatttttcctaactcccaata-ttaact--ccctttatttcacttaactccctctcaatttctatttattc 298  Q
    |||| ||||| |||| | ||||||||||||  |||||||||||||||| | ||||||  ||||||||||||||||||||||||| || ||||||| ||||    
T  33089992 tgttgtacgtaaaacagtttctgactttct-cttttcctaactcccaacacttaactccccctttatttcacttaactccctcttaa-ttctattaattc 33090089  T
Q  299 taatttaatc 308  Q
    ||||| ||||    
T  33090090 taattaaatc 33090099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 103 - 308
Target Start/End: Complemental strand, 25623822 - 25623615
Alignment:
Q  103 agtaaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctcttctcccttgctcttggtttttctcccaaaactt 202  Q
    |||||||||||||||||||||| ||||||||||||| |||||||  |  | |||||| |||||||||||||||||| |||||||||||||||||||||||    
T  25623822 agtaaacctcacccttaccttagttcagatgaacaaattctacaggatttatggttcacttggctcttctcccttgttcttggtttttctcccaaaactt 25623723  T
Q  203 g-ttttacgtgaaactgcttctgactttctatttttcctaactcccaata-ttaact--ccctttatttcacttaactccctctcaatttctatttattc 298  Q
    | || ||||| |||| | ||||||| |||| ||||||||||||||||| | ||||||  |||||||||||| |||||||||||| || ||||||| ||||    
T  25623722 gattgtacgtaaaacagtttctgac-ttctctttttcctaactcccaacacttaactccccctttatttcatttaactccctcttaa-ttctattaattc 25623625  T
Q  299 taatttaatc 308  Q
    ||||| ||||    
T  25623624 taattaaatc 25623615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 103 - 308
Target Start/End: Original strand, 22744720 - 22744926
Alignment:
Q  103 agtaaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctcttctcccttgctcttggtttttctcccaaaa--- 199  Q
    ||||||| ||||||||||||||||||||||||| ||| |||||| ||  |||||||||||||||||| ||    |  |||   ||||||||||||||       
T  22744720 agtaaacatcacccttaccttaattcagatgaaaaatctctacagaa--tctggttctcttggctctacttggctcttctccctttttctcccaaaagct 22744817  T
Q  200 cttgttttacgtgaaactgcttctgactttctatttttcctaactcccaata-ttaact-ccctttatttcacttaactccctctcaatttctatttatt 297  Q
    ||  || ||||||||||||||||||||| |||  |||||||||||||||||| |||||| |||||||||||| |||||||||||| || ||||||| |||    
T  22744818 ctatttgtacgtgaaactgcttctgactatct-cttttcctaactcccaatacttaactcccctttatttcatttaactccctcttaa-ttctattaatt 22744915  T
Q  298 ctaatttaatc 308  Q
    |||||| ||||    
T  22744916 ctaattaaatc 22744926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 172 - 287
Target Start/End: Original strand, 23654435 - 23654553
Alignment:
Q  172 tcccttgctcttggtttttctcccaaaacttg-ttttacgtgaaactgcttctgactttctatttttcctaactcccaata-ttaact--ccctttattt 267  Q
    |||||||||||||||||||||||||||||||| ||  |||| |||| | ||||||||||||  |||||||||||||||| | ||||||  ||||||||||    
T  23654435 tcccttgctcttggtttttctcccaaaacttgattgcacgtaaaacagtttctgactttct-cttttcctaactcccaacacttaactccccctttattt 23654533  T
Q  268 cacttaactccctctcaatt 287  Q
    ||||||||||||||| ||||    
T  23654534 cacttaactccctcttaatt 23654553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 161 - 279
Target Start/End: Complemental strand, 22815556 - 22815433
Alignment:
Q  161 cttggctcttctcc---cttgctcttggtttttctcccaaaacttgttt-tacgtgaaactgcttctgactttctatttttcctaactcccaatattaac 256  Q
    ||||||||||||||   ||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||   | ||||||||||||| ||  |||||    
T  22815556 cttggctcttctcctagctttctcttggtttttctcccaaaatttgtttgtacgtgaaactgcttctgacttctcaattttcctaactcctaaacttaac 22815457  T
Q  257 t-ccctttatttcacttaactccc 279  Q
    | |||||||||| | |||||||||    
T  22815456 tcccctttattttatttaactccc 22815433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 103 - 169
Target Start/End: Complemental strand, 20004870 - 20004806
Alignment:
Q  103 agtaaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctct 169  Q
    ||||||||||||||||||||||| |||||||||||||||||||   || ||||||||||||||||||    
T  20004870 agtaaacctcacccttaccttaaatcagatgaacaatttctac--gaattctggttctcttggctct 20004806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 124
Target Start/End: Original strand, 22056700 - 22056753
Alignment:
Q  71 tcaaaatcagaattcataacatatacaattgcagtaaacctcacccttacctta 124  Q
    |||||||||||||||| ||| ||||||||||| |||||||||||||||||||||    
T  22056700 tcaaaatcagaattcagaacctatacaattgcggtaaacctcacccttacctta 22056753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 72 - 124
Target Start/End: Original strand, 22178569 - 22178621
Alignment:
Q  72 caaaatcagaattcataacatatacaattgcagtaaacctcacccttacctta 124  Q
    ||||||||||||||| ||| ||||||||||| |||||||||||||||||||||    
T  22178569 caaaatcagaattcagaacctatacaattgcggtaaacctcacccttacctta 22178621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 173 - 249
Target Start/End: Original strand, 18614382 - 18614458
Alignment:
Q  173 cccttgctcttggtttt-tctcccaaaacttgttttacgtgaaactgcttctgactttctatttttcctaactcccaa 249  Q
    |||||| |||||||||| ||||||||||||||||| |||| |||||||||||||| || |  ||||||||||||||||    
T  18614382 cccttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacctt-ttcttttcctaactcccaa 18614458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 109 - 146
Target Start/End: Original strand, 19750590 - 19750627
Alignment:
Q  109 cctcacccttaccttaattcagatgaacaatttctaca 146  Q
    ||||||||||||||||||||||||||||||||||||||    
T  19750590 cctcacccttaccttaattcagatgaacaatttctaca 19750627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 179 - 223
Target Start/End: Complemental strand, 20494299 - 20494254
Alignment:
Q  179 ctcttggtttttctcccaaaacttgttt-tacgtgaaactgcttct 223  Q
    |||||||||||||||||||||||||||| |||||||||||||||||    
T  20494299 ctcttggtttttctcccaaaacttgtttgtacgtgaaactgcttct 20494254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 71 - 124
Target Start/End: Complemental strand, 22024778 - 22024725
Alignment:
Q  71 tcaaaatcagaattcataacatatacaattgcagtaaacctcacccttacctta 124  Q
    |||||||||||||||| ||  ||||||||||| |||||||||||||||||||||    
T  22024778 tcaaaatcagaattcagaatctatacaattgcggtaaacctcacccttacctta 22024725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 173 - 249
Target Start/End: Original strand, 23826318 - 23826394
Alignment:
Q  173 cccttgctcttggtttt-tctcccaaaacttgttttacgtgaaactgcttctgactttctatttttcctaactcccaa 249  Q
    |||||| |||||||||| ||||||||||||||||| |||| |||||||||||||| || |  ||||||||||||||||    
T  23826318 cccttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacctt-ttcttttcctaactcccaa 23826394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 72 - 124
Target Start/End: Complemental strand, 1803707 - 1803655
Alignment:
Q  72 caaaatcagaattcataacatatacaattgcagtaaacctcacccttacctta 124  Q
    ||||||||||||||| ||| |||| |||||| |||||||||||||||||||||    
T  1803707 caaaatcagaattcagaacctatagaattgcggtaaacctcacccttacctta 1803655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 72 - 124
Target Start/End: Complemental strand, 9272377 - 9272325
Alignment:
Q  72 caaaatcagaattcataacatatacaattgcagtaaacctcacccttacctta 124  Q
    ||||||||||||||| ||| |||| |||||| |||||||||||||||||||||    
T  9272377 caaaatcagaattcagaacctataaaattgcggtaaacctcacccttacctta 9272325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 206
Target Start/End: Complemental strand, 22024682 - 22024646
Alignment:
Q  170 tctcccttgctcttggtttttctcccaaaacttgttt 206  Q
    |||||||||||||||||||||||||||||||||||||    
T  22024682 tctcccttgctcttggtttttctcccaaaacttgttt 22024646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 103 - 138
Target Start/End: Complemental strand, 21685241 - 21685206
Alignment:
Q  103 agtaaacctcacccttaccttaattcagatgaacaa 138  Q
    ||||||||||||||||||||||||||||||||||||    
T  21685241 agtaaacctcacccttaccttaattcagatgaacaa 21685206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 103 - 138
Target Start/End: Complemental strand, 21689590 - 21689555
Alignment:
Q  103 agtaaacctcacccttaccttaattcagatgaacaa 138  Q
    ||||||||||||||||||||||||||||||||||||    
T  21689590 agtaaacctcacccttaccttaattcagatgaacaa 21689555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 165 - 204
Target Start/End: Complemental strand, 22062690 - 22062651
Alignment:
Q  165 gctcttctcccttgctcttggtttttctcccaaaacttgt 204  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  22062690 gctcctctcccttgctcttggtttttctcccaaaacttgt 22062651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 159 - 223
Target Start/End: Complemental strand, 15635056 - 15634988
Alignment:
Q  159 ctcttggctcttctcc---cttgctcttggtttttctcccaaaacttgttt-tacgtgaaactgcttct 223  Q
    ||||||||||||||||   ||| |||||||||||||||||||||  ||||| |||||||||||||||||    
T  15635056 ctcttggctcttctcctagctttctcttggtttttctcccaaaaactgtttgtacgtgaaactgcttct 15634988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 258 - 308
Target Start/End: Original strand, 19750751 - 19750800
Alignment:
Q  258 ccctttatttcacttaactccctctcaatttctatttattctaatttaatc 308  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||| ||||    
T  19750751 ccctttatttcacttaactccctctcaa-ttctattaattctaattaaatc 19750800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 131
Target Start/End: Original strand, 19860495 - 19860555
Alignment:
Q  71 tcaaaatcagaattc-ataacatatacaattgcagtaaacctcacccttaccttaattcaga 131  Q
    ||||||||||||||| ||||| ||||| |||| || ||||||||||||||||||||||||||    
T  19860495 tcaaaatcagaattcaataac-tatactattgaagcaaacctcacccttaccttaattcaga 19860555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 103 - 177
Target Start/End: Complemental strand, 20011275 - 20011198
Alignment:
Q  103 agtaaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttct----cttggctcttctccctt 177  Q
    ||||||||||||||||||||||||||||| ||||||  ||||||  || |||||||||    |||||||||||||||||    
T  20011275 agtaaacctcacccttaccttaattcagacgaacaaactctaca-gaattctggttctcttacttggctcttctccctt 20011198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 161 - 223
Target Start/End: Complemental strand, 21860492 - 21860426
Alignment:
Q  161 cttggctcttctcc---cttgctcttggtttttctcccaaaacttgttt-tacgtgaaactgcttct 223  Q
    ||||||||||||||   ||| |||||||||||||||||||||  ||||| |||||||||||||||||    
T  21860492 cttggctcttctcctagctttctcttggtttttctcccaaaaactgtttgtacgtgaaactgcttct 21860426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 38
Target Start/End: Complemental strand, 20022161 - 20022126
Alignment:
Q  3 ttaaatcaaccaattacaacttataaacctaattcc 38  Q
    |||||||||||||||||||||| |||||||||||||    
T  20022161 ttaaatcaaccaattacaacttctaaacctaattcc 20022126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 211
Target Start/End: Complemental strand, 21321133 - 21321082
Alignment:
Q  161 cttggctcttctcccttgctcttggtttt-tctcccaaaacttgttttacgt 211  Q
    |||||||||||||||||| |||||||||| |||||||||||| |||| ||||    
T  21321133 cttggctcttctcccttgttcttggttttctctcccaaaactggtttcacgt 21321082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 32951002 - 32951053
Alignment:
Q  179 ctcttggtttttctcccaaaact-tgttttacgtg-aaactgcttctgactt 228  Q
    ||||||||||||||||||||||| |||| |||||| ||||||||||||||||    
T  32951002 ctcttggtttttctcccaaaactctgttgtacgtgaaaactgcttctgactt 32951053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 173 - 226
Target Start/End: Complemental strand, 23481996 - 23481942
Alignment:
Q  173 cccttgctcttggtttt-tctcccaaaacttgttttacgtgaaactgcttctgac 226  Q
    |||||| ||||| |||| ||||||||||||||||| |||| ||||||||||||||    
T  23481996 cccttgttcttgattttctctcccaaaacttgtttcacgtaaaactgcttctgac 23481942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 131
Target Start/End: Complemental strand, 16266034 - 16266001
Alignment:
Q  98 attgcagtaaacctcacccttaccttaattcaga 131  Q
    |||| |||||||||||||||||||||||||||||    
T  16266034 attgaagtaaacctcacccttaccttaattcaga 16266001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 226
Target Start/End: Original strand, 19883049 - 19883098
Alignment:
Q  179 ctcttggtttttctcccaaaact-tgttttacgtg-aaactgcttctgac 226  Q
    ||||||||||||||||||||||| |||| |||||| ||||||||||||||    
T  19883049 ctcttggtttttctcccaaaactctgttgtacgtgaaaactgcttctgac 19883098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 124
Target Start/End: Complemental strand, 22062781 - 22062728
Alignment:
Q  71 tcaaaatcagaattcataacatatacaattgcagtaaacctcacccttacctta 124  Q
    ||||||||| |||||| ||  ||||||||||  |||||||||||||||||||||    
T  22062781 tcaaaatcataattcagaatctatacaattgtggtaaacctcacccttacctta 22062728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 216
Target Start/End: Original strand, 25112069 - 25112122
Alignment:
Q  164 ggctcttctcccttgctcttggtttttctc-ccaaaacttgttttacgtgaaac 216  Q
    |||||||||| |||| ||||| |||| ||| |||||||||||||||||||||||    
T  25112069 ggctcttctctcttgttcttgcttttcctctccaaaacttgttttacgtgaaac 25112122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 138
Target Start/End: Original strand, 28854852 - 28854881
Alignment:
Q  109 cctcacccttaccttaattcagatgaacaa 138  Q
    ||||||||||||||||||||||||||||||    
T  28854852 cctcacccttaccttaattcagatgaacaa 28854881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 115; Significance: 5e-58; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 103 - 308
Target Start/End: Complemental strand, 21901020 - 21900816
Alignment:
Q  103 agtaaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctcttctcccttgctcttggtttttctcccaaaactt 202  Q
    ||||||||||||||||||||||||||||||||| ||| |||||| ||  |||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  21901020 agtaaacctcacccttaccttaattcagatgaaaaatctctacagaa--tctggttctcttggttcttctcccttgttcttggtttttctcccaaaactt 21900923  T
Q  203 gttttacgtgaaactgcttctgactttctatttttcctaactcccaata-ttaact--ccctttatttcacttaactccctctcaatttctatttattct 299  Q
    ||||||||||||||| |||||||||||||  |||||||||||||||| | ||||||  |||||||||||| |||||||||||| || ||||||| |||||    
T  21900922 gttttacgtgaaactacttctgactttct-cttttcctaactcccaacacttaactccccctttatttcatttaactccctcttaa-ttctattaattct 21900825  T
Q  300 aatttaatc 308  Q
    |||| ||||    
T  21900824 aattaaatc 21900816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 103 - 227
Target Start/End: Original strand, 21495882 - 21496006
Alignment:
Q  103 agtaaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctcttctcccttgctcttggtttttctcccaaaactt 202  Q
    ||||||||||||||||||||||||||||||||||||| |||| | |||||||||||||||  |||||||||||||| || ||||||||||| ||||||||    
T  21495882 agtaaacctcacccttaccttaattcagatgaacaatctctatacaaaatctggttctctaagctcttctcccttgttcctggtttttctctcaaaactt 21495981  T
Q  203 gttttacgtgaaactgcttctgact 227  Q
     ||||||||||||||||||||||||    
T  21495982 attttacgtgaaactgcttctgact 21496006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 103 - 199
Target Start/End: Original strand, 10036133 - 10036227
Alignment:
Q  103 agtaaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctcttctcccttgctcttggtttttctcccaaaa 199  Q
    ||||||||||||||||||||||||||||||||| ||| |||||   || ||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  10036133 agtaaacctcacccttaccttaattcagatgaaaaatctctacg--aattctggttctcttggctcttctcccttgttcttggtttttcttccaaaa 10036227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 106 - 247
Target Start/End: Complemental strand, 23443389 - 23443249
Alignment:
Q  106 aaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctcttctcccttgctcttggtttttctcccaaaa-ct-tg 203  Q
    |||||||||||||||||||| | ||||||||||| |||||   || ||||||||||||||||||||||||||| |||||||||||||| ||||| || ||    
T  23443389 aaacctcacccttaccttaacttagatgaacaatctctacg--aattctggttctcttggctcttctcccttgttcttggtttttctcgcaaaagctctg 23443292  T
Q  204 ttttacgtgaaactgcttctgactttctatttttcctaactccc 247  Q
    || ||||| |||| | ||||||||||||  ||||||||||||||    
T  23443291 ttgtacgtaaaacagtttctgactttct-cttttcctaactccc 23443249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 106 - 308
Target Start/End: Original strand, 18819898 - 18820093
Alignment:
Q  106 aaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctcttctcccttgctcttggtttttctcccaaaacttgt- 204  Q
    |||||||||||||||||||||||||||||| ||| |||||  | ||||||||||||||||||||||||||||| ||||||     ||||||||| ||||     
T  18819898 aaacctcacccttaccttaattcagatgaaaaatctctac--agaatctggttctcttggctcttctcccttgttcttgg-----ctcccaaaatttgtc 18819990  T
Q  205 tttacgtgaaactgcttctgactttctatttttcctaactcccaata-ttaactcc-ctttatttcacttaactccctctcaatttctatttattctaat 302  Q
    | ||||| |||    ||||||| ||||  |||||||||||||||| | ||||||||  ||||||||| |||||||||||| || ||||||| ||||||||    
T  18819991 tgtacgtaaaagcagttctgac-ttct-cttttcctaactcccaacacttaactcctatttatttcatttaactccctcttaa-ttctattaattctaat 18820087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 103 - 279
Target Start/End: Complemental strand, 15193159 - 15192978
Alignment:
Q  103 agtaaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctcttct---cccttgctcttggtttttctcccaaaa 199  Q
    |||||||||||||||||||||||||||||||||||| || |||| |||||||||||| ||||||||| ||   | ||| |||    ||||||||||||||    
T  15193159 agtaaacctcacccttaccttaattcagatgaacaa-ttgtaca-aaaatctggttcacttggctctacttgactcttcctc--cctttttctcccaaaa 15193064  T
Q  200 cttgttt----tacgtgaaactgc-ttctgactttctatttttcctaactcccaata-ttaact-ccctttatttcacttaactccc 279  Q
    |||||||    ||||||||||||| ||||| || | |  |||||||||||||||||| |||||| |||||||||||| |||||||||    
T  15193063 cttgtttgttgtacgtgaaactgctttctggctat-ttcttttcctaactcccaatacttaactcccctttatttcatttaactccc 15192978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 103 - 169
Target Start/End: Original strand, 21889573 - 21889637
Alignment:
Q  103 agtaaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctct 169  Q
    |||||||||||||||||||||||||||||||||||| ||||| | ||||||||||||||||||||||    
T  21889573 agtaaacctcacccttaccttaattcagatgaacaa-ttctaga-aaaatctggttctcttggctct 21889637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 72 - 124
Target Start/End: Original strand, 20938576 - 20938628
Alignment:
Q  72 caaaatcagaattcataacatatacaattgcagtaaacctcacccttacctta 124  Q
    ||||||||||||||| ||| ||||||||||| |||||||||||||||||||||    
T  20938576 caaaatcagaattcagaacctatacaattgcggtaaacctcacccttacctta 20938628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 72 - 124
Target Start/End: Complemental strand, 22312027 - 22311975
Alignment:
Q  72 caaaatcagaattcataacatatacaattgcagtaaacctcacccttacctta 124  Q
    ||||||||||||||| ||| ||||||||||| |||||||||||||||||||||    
T  22312027 caaaatcagaattcagaacctatacaattgcggtaaacctcacccttacctta 22311975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 72 - 124
Target Start/End: Complemental strand, 22499770 - 22499718
Alignment:
Q  72 caaaatcagaattcataacatatacaattgcagtaaacctcacccttacctta 124  Q
    ||||||||||||||| ||| ||||||||||| |||||||||||||||||||||    
T  22499770 caaaatcagaattcagaacctatacaattgcggtaaacctcacccttacctta 22499718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 161 - 279
Target Start/End: Complemental strand, 24276457 - 24276332
Alignment:
Q  161 cttggctcttctcc---cttgctcttggtttttctcccaaaact-tgttt-tacgtg-aaactgcttctgactttctatttttcctaactcccaatatta 254  Q
    ||||||||||||||   ||| ||||||||||||||||||||||| ||||| |||||| ||||||||||||||||   | ||||||||||||| ||  |||    
T  24276457 cttggctcttctcctagctttctcttggtttttctcccaaaactctgtttgtacgtgaaaactgcttctgacttctcaattttcctaactcctaaactta 24276358  T
Q  255 act-ccctttatttcacttaactccc 279  Q
    ||| |||||||||| | |||||||||    
T  24276357 actcccctttattttatttaactccc 24276332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 161 - 279
Target Start/End: Original strand, 24385756 - 24385881
Alignment:
Q  161 cttggctcttctcc---cttgctcttggtttttctcccaaaact-tgttt-tacgtg-aaactgcttctgactttctatttttcctaactcccaatatta 254  Q
    ||||||||||||||   ||| ||||||||||||||||||||||| ||||| |||||| ||||||||||||||||   | ||||||||||||| ||  |||    
T  24385756 cttggctcttctcctagctttctcttggtttttctcccaaaactctgtttgtacgtgaaaactgcttctgacttctcaattttcctaactcctaaactta 24385855  T
Q  255 act-ccctttatttcacttaactccc 279  Q
    ||| |||||||||| | |||||||||    
T  24385856 actcccctttattttatttaactccc 24385881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 173 - 249
Target Start/End: Complemental strand, 22006833 - 22006757
Alignment:
Q  173 cccttgctcttggtttt-tctcccaaaacttgttttacgtgaaactgcttctgactttctatttttcctaactcccaa 249  Q
    |||||| |||||||||| |||||||||||||||||||||| ||||||||||| || || |  ||||||||||||||||    
T  22006833 cccttgttcttggttttctctcccaaaacttgttttacgtaaaactgcttctcacctt-ttcttttcctaactcccaa 22006757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 72 - 169
Target Start/End: Original strand, 25014542 - 25014637
Alignment:
Q  72 caaaatcagaattcataacatatacaattgcagtaaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctct 169  Q
    ||||||||||||| | ||  ||||| | || |||||||||| |||||||||| |||||||||||||| ||||||| ||||| | ||||||||||||||    
T  25014542 caaaatcagaattaaaaatctatactactgaagtaaacctcccccttaccttgattcagatgaacaa-ttctaca-aaaatatagttctcttggctct 25014637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 181 - 279
Target Start/End: Original strand, 9777219 - 9777320
Alignment:
Q  181 cttggtttt-tctcccaaaacttgttttacgtgaaactgcttctgactttctatttttcctaactcccaatat-taactc--cctttatttcacttaact 276  Q
    ||||||||| ||||||||||||||||| |||| ||||||||||| || ||||  |||||||||||||||| || ||||||  ||||||||||| | ||||    
T  9777219 cttggttttctctcccaaaacttgtttcacgtaaaactgcttctcaccttct-cttttcctaactcccaaaatataactcctcctttatttcattaaact 9777317  T
Q  277 ccc 279  Q
    |||    
T  9777318 ccc 9777320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 103 - 138
Target Start/End: Complemental strand, 43242532 - 43242497
Alignment:
Q  103 agtaaacctcacccttaccttaattcagatgaacaa 138  Q
    ||||||||||||||||||||||||||||||||||||    
T  43242532 agtaaacctcacccttaccttaattcagatgaacaa 43242497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 227
Target Start/End: Original strand, 23528749 - 23528810
Alignment:
Q  167 tcttctcccttgctcttggtttt-tctcccaaaacttgttttacgtgaaactgcttctgact 227  Q
    |||||||||||| |||||||||| ||||| |||||| |||| |||| |||||||||||||||    
T  23528749 tcttctcccttgttcttggttttctctcctaaaactggtttcacgtaaaactgcttctgact 23528810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 223
Target Start/End: Complemental strand, 30137929 - 30137884
Alignment:
Q  179 ctcttggtttttctcccaaaacttgttt-tacgtgaaactgcttct 223  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||    
T  30137929 ctcttggtttttctcccaaaaattgtttgtacgtgaaactgcttct 30137884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 68 - 131
Target Start/End: Original strand, 598144 - 598207
Alignment:
Q  68 aattcaaaatcagaattca-taacatatacaattgcagtaaacctcacccttaccttaattcaga 131  Q
    ||||||||||||||| ||| |||| || || |||| |||||||||||||||||||||||||||||    
T  598144 aattcaaaatcagaaatcaataac-tacactattgaagtaaacctcacccttaccttaattcaga 598207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 80 - 124
Target Start/End: Complemental strand, 757489 - 757445
Alignment:
Q  80 gaattcataacatatacaattgcagtaaacctcacccttacctta 124  Q
    ||||||| ||| ||||||||||| |||||||||||||||||||||    
T  757489 gaattcagaacctatacaattgcggtaaacctcacccttacctta 757445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 72 - 124
Target Start/End: Complemental strand, 17263989 - 17263937
Alignment:
Q  72 caaaatcagaattcataacatatacaattgcagtaaacctcacccttacctta 124  Q
    ||||||||||||||| ||| ||||  ||||| |||||||||||||||||||||    
T  17263989 caaaatcagaattcagaacctataagattgcggtaaacctcacccttacctta 17263937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 72 - 124
Target Start/End: Complemental strand, 17270471 - 17270419
Alignment:
Q  72 caaaatcagaattcataacatatacaattgcagtaaacctcacccttacctta 124  Q
    ||||||||||||||| ||| ||||  ||||| |||||||||||||||||||||    
T  17270471 caaaatcagaattcagaacctataagattgcggtaaacctcacccttacctta 17270419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 161 - 223
Target Start/End: Original strand, 17813576 - 17813642
Alignment:
Q  161 cttggctcttctcc---cttgctcttggtttttctcccaaaacttgttt-tacgtgaaactgcttct 223  Q
    ||||||||||||||   ||| |||||||||||||||||||||  ||||| |||||||||||||||||    
T  17813576 cttggctcttctcctagctttctcttggtttttctcccaaaaactgtttgtacgtgaaactgcttct 17813642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 170 - 279
Target Start/End: Original strand, 19512494 - 19512607
Alignment:
Q  170 tctcccttgctcttggtttttctc--ccaaaacttgttttacgtgaaactgcttctgactttctatttttcctaactcccaatat-taactc--ccttta 264  Q
    |||||||||  |||||||||||||  ||||||||||||| |||| ||||||||||| || || |  |||||||||||||||| || ||||||  ||||||    
T  19512494 tctcccttgtccttggtttttctctcccaaaacttgtttcacgtaaaactgcttctaacctt-ttcttttcctaactcccaaaatataactcctccttta 19512592  T
Q  265 tttcacttaactccc 279  Q
    ||||| | |||||||    
T  19512593 tttcattaaactccc 19512607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 72 - 124
Target Start/End: Original strand, 22175987 - 22176039
Alignment:
Q  72 caaaatcagaattcataacatatacaattgcagtaaacctcacccttacctta 124  Q
    ||||||||||||||| ||| ||||  ||||| |||||||||||||||||||||    
T  22175987 caaaatcagaattcagaacctataagattgcggtaaacctcacccttacctta 22176039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 170 - 279
Target Start/End: Complemental strand, 28370001 - 28369888
Alignment:
Q  170 tctcccttgctcttggtttttctc--ccaaaacttgttttacgtgaaactgcttctgactttctatttttcctaactcccaatat-taactc--ccttta 264  Q
    |||||||||  |||||||||||||  ||||||||||||| |||| ||||||||||| || || |  |||||||||||||||| || ||||||  ||||||    
T  28370001 tctcccttgtccttggtttttctctcccaaaacttgtttcacgtaaaactgcttctaacctt-ttcttttcctaactcccaaaatataactcctccttta 28369903  T
Q  265 tttcacttaactccc 279  Q
    ||||| | |||||||    
T  28369902 tttcattaaactccc 28369888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 134
Target Start/End: Original strand, 26754497 - 26754528
Alignment:
Q  103 agtaaacctcacccttaccttaattcagatga 134  Q
    ||||||||||||||||||||||||||||||||    
T  26754497 agtaaacctcacccttaccttaattcagatga 26754528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 216
Target Start/End: Original strand, 26754763 - 26754822
Alignment:
Q  158 tctcttggctcttctcccttgctcttggtttttct-cccaaaacttgttttacgtgaaac 216  Q
    ||||||| ||||||||||||| ||||||||||||| |||||||||  || ||||||||||    
T  26754763 tctcttgactcttctcccttgttcttggtttttctccccaaaactgattgtacgtgaaac 26754822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 179 - 223
Target Start/End: Complemental strand, 21980006 - 21979960
Alignment:
Q  179 ctcttggtttttctcccaaaact-tgttt-tacgtgaaactgcttct 223  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||||    
T  21980006 ctcttggtttttctcccaaaactctgtttgtacgtgaaactgcttct 21979960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 181 - 226
Target Start/End: Original strand, 22337647 - 22337693
Alignment:
Q  181 cttggtttt-tctcccaaaacttgttttacgtgaaactgcttctgac 226  Q
    ||||||||| ||||||||||||||||| |||| ||||||||||||||    
T  22337647 cttggttttctctcccaaaacttgtttcacgtaaaactgcttctgac 22337693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 181 - 226
Target Start/End: Original strand, 22341185 - 22341231
Alignment:
Q  181 cttggtttt-tctcccaaaacttgttttacgtgaaactgcttctgac 226  Q
    ||||||||| ||||||||||||||||| |||| ||||||||||||||    
T  22341185 cttggttttctctcccaaaacttgtttcacgtaaaactgcttctgac 22341231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 170 - 249
Target Start/End: Complemental strand, 41875541 - 41875461
Alignment:
Q  170 tctcccttgctcttggtttttctc--ccaaaacttgttttacgtgaaactgcttctgactttctatttttcctaactcccaa 249  Q
    |||||||||  |||||||||||||  ||||||||||||| |||||||||| ||||| || || |  ||||||||||||||||    
T  41875541 tctcccttgtccttggtttttctctcccaaaacttgtttcacgtgaaacttcttctaacatt-ttcttttcctaactcccaa 41875461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 131
Target Start/End: Original strand, 19509081 - 19509114
Alignment:
Q  98 attgcagtaaacctcacccttaccttaattcaga 131  Q
    |||| |||||||||||||||||||||||||||||    
T  19509081 attgaagtaaacctcacccttaccttaattcaga 19509114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 229
Target Start/End: Original strand, 22751253 - 22751310
Alignment:
Q  173 cccttgctcttggtttt-tctcccaaaacttgttttacgtgaaactgcttctgacttt 229  Q
    |||||| | |||||||| ||||| ||||||||||| |||| |||||||||||||||||    
T  22751253 cccttgttattggttttctctcctaaaacttgtttcacgtaaaactgcttctgacttt 22751310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 30138103 - 30138062
Alignment:
Q  2 attaaatcaaccaattacaacttataaacctaattcctaatt 43  Q
    |||||| |||||||||||||||| ||||||||||||| ||||    
T  30138103 attaaaacaaccaattacaacttctaaacctaattcccaatt 30138062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 113; Significance: 8e-57; HSPs: 2)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 113; E-Value: 8e-57
Query Start/End: Original strand, 110 - 308
Target Start/End: Original strand, 13449 - 13644
Alignment:
Q  110 ctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctcttctcccttgctcttggtttttctcccaaaacttgttttac 209  Q
    |||||||||||||||| |||||||||| | |||||||  |  ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  13449 ctcacccttaccttaaatcagatgaacgaattctacagga--tctagttctcttggctcttctcccttgttcttggtttttctcccaaaacttgttttac 13546  T
Q  210 gtgaaactgcttctgactttctatttttcctaactcccaata-ttaactccctttatttcacttaactccctctcaatttctatttattctaatttaatc 308  Q
    ||||||||||||||||||||||  |||||||||||||||||| ||||||| |||||||||| |||||||||||| || ||||||| ||||||||| ||||    
T  13547 gtgaaactgcttctgactttct-cttttcctaactcccaatacttaactcactttatttcatttaactccctcttaa-ttctattaattctaattaaatc 13644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 161 - 211
Target Start/End: Original strand, 11731 - 11780
Alignment:
Q  161 cttggctcttctcccttgctcttggtttttctcccaaaacttgttttacgt 211  Q
    |||||||||||||||||| |||| ||||||||||| ||||||||| |||||    
T  11731 cttggctcttctcccttgttcttagtttttctccc-aaacttgttgtacgt 11780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 112; Significance: 3e-56; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 106 - 308
Target Start/End: Original strand, 19152866 - 19153066
Alignment:
Q  106 aaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctcttctcccttgctcttggtttttctcccaaaacttgtt 205  Q
    |||||||||||||||| |||||||||||| ||| ||||||| ||  |||||||||||||||||||||  |||| ||||||||||||||||||||||||||    
T  19152866 aaacctcacccttaccataattcagatgagcaaattctacagaat-tctggttctcttggctcttctttcttgttcttggtttttctcccaaaacttgtt 19152964  T
Q  206 ttacgtgaaactgcttctgactttctatttttcctaactcccaata-ttaactccctttatttcacttaactccctctcaatttctatttattctaattt 304  Q
    ||||||||||||||||||||| |||   |||||||||||||||||| |||||||||||||||||| |||||||||||| || ||||||| |||||||||     
T  19152965 ttacgtgaaactgcttctgac-ttccccttttcctaactcccaatacttaactccctttatttcatttaactccctcttaa-ttctattaattctaatta 19153062  T
Q  305 aatc 308  Q
    ||||    
T  19153063 aatc 19153066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 106 - 308
Target Start/End: Original strand, 20752265 - 20752465
Alignment:
Q  106 aaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctcttctcccttgctcttggtttttctcccaaaacttgtt 205  Q
    |||||||||||||||| |||||||||||| ||| ||||||| ||  |||||||||||||||||||||  |||| ||||||||||||||||||||||||||    
T  20752265 aaacctcacccttaccataattcagatgagcaaattctacagaat-tctggttctcttggctcttctttcttgttcttggtttttctcccaaaacttgtt 20752363  T
Q  206 ttacgtgaaactgcttctgactttctatttttcctaactcccaata-ttaactccctttatttcacttaactccctctcaatttctatttattctaattt 304  Q
    ||||||||||||||||||||| |||   |||||||||||||||||| |||||||||||||||||| |||||||||||| || ||||||| |||||||||     
T  20752364 ttacgtgaaactgcttctgac-ttccccttttcctaactcccaatacttaactccctttatttcatttaactccctcttaa-ttctattaattctaatta 20752461  T
Q  305 aatc 308  Q
    ||||    
T  20752462 aatc 20752465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 106 - 308
Target Start/End: Original strand, 19146545 - 19146745
Alignment:
Q  106 aaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctcttctcccttgctcttggtttttctcccaaaacttgtt 205  Q
    |||||||||||||||||||| |||||||| ||| ||||||| ||  |||||||||||||||||||||| |||| ||||||||||||||| ||||||||||    
T  19146545 aaacctcacccttaccttaaatcagatgagcaaattctacagaat-tctggttctcttggctcttctctcttgttcttggtttttctccaaaaacttgtt 19146643  T
Q  206 ttacgtgaaactgcttctgactttctatttttcctaactcccaata-ttaactccctttatttcacttaactccctctcaatttctatttattctaattt 304  Q
    |||||||| |||||||||||| |||   |||||||||||||||||| |||||||||||||||||| |||||||||||| || ||||||| |||||||||     
T  19146644 ttacgtgatactgcttctgac-ttccccttttcctaactcccaatacttaactccctttatttcatttaactccctcttaa-ttctattaattctaatta 19146741  T
Q  305 aatc 308  Q
    ||||    
T  19146742 aatc 19146745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 106 - 308
Target Start/End: Original strand, 20745944 - 20746144
Alignment:
Q  106 aaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctcttctcccttgctcttggtttttctcccaaaacttgtt 205  Q
    |||||||||||||||||||| |||||||| ||| ||||||| ||  |||||||||||||||||||||| |||| ||||||||||||||| ||||||||||    
T  20745944 aaacctcacccttaccttaaatcagatgagcaaattctacagaat-tctggttctcttggctcttctctcttgttcttggtttttctccaaaaacttgtt 20746042  T
Q  206 ttacgtgaaactgcttctgactttctatttttcctaactcccaata-ttaactccctttatttcacttaactccctctcaatttctatttattctaattt 304  Q
    |||||||| |||||||||||| |||   |||||||||||||||||| |||||||||||||||||| |||||||||||| || ||||||| |||||||||     
T  20746043 ttacgtgatactgcttctgac-ttccccttttcctaactcccaatacttaactccctttatttcatttaactccctcttaa-ttctattaattctaatta 20746140  T
Q  305 aatc 308  Q
    ||||    
T  20746141 aatc 20746144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 103 - 308
Target Start/End: Complemental strand, 14249692 - 14249488
Alignment:
Q  103 agtaaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctcttctcccttgctcttggtttttctcccaaaact- 201  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||  || ||||||||||||||||||||||||||| ||||||||||||||||||||||     
T  14249692 agtaaacctcacccttaccttaaatcagatgaacaatctctaca--aattctggttctcttggctcttctcccttgttcttggtttttctcccaaaactc 14249595  T
Q  202 tgttttacgtgaaactgcttctgactt-tctatttttcctaactcccaatattaactc-cctttatttcacttaactccctctcaatttctatttattct 299  Q
    |||| ||||| |||| | ||||||||| ||| |||||||||||||| | | ||||||| ||||||||||| ||||||||| || || ||||||| |||||    
T  14249594 tgttgtacgtaaaacagtttctgacttctct-tttttcctaactcctattcttaactctcctttatttcatttaactcccccttaa-ttctattaattct 14249497  T
Q  300 aatttaatc 308  Q
    |||||||||    
T  14249496 aatttaatc 14249488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 103 - 308
Target Start/End: Complemental strand, 16475293 - 16475087
Alignment:
Q  103 agtaaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctcttctcccttgctcttggtttttctcccaaaactt 202  Q
    |||||||||||||||| ||||||||||||||||||||| ||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  16475293 agtaaacctcacccttgccttaattcagatgaacaatt-ctaca-aaaatctgattcacttggctcttctcccttgctcttggtttttctcccaaaactt 16475196  T
Q  203 gttttacgtg-aaactgcttctgactt-tc-tatttttcctaactcccaatattaact--ccctttatttcacttaactccctctcaatttctatttatt 297  Q
    ||||||| || ||||||||| |||||| || |  | ||||||||||| ||  ||||||  ||||||||||||||||||||||||| || ||||||| |||    
T  16475195 gttttacatgaaaactgcttatgacttctcttcctattcctaactcctaa-cttaactccccctttatttcacttaactccctcttaa-ttctattaatt 16475098  T
Q  298 ctaatttaatc 308  Q
    |||||||||||    
T  16475097 ctaatttaatc 16475087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 103 - 308
Target Start/End: Complemental strand, 14265162 - 14264958
Alignment:
Q  103 agtaaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctcttctcccttgctcttggtttttctcccaaaact- 201  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||  || ||||||||||||||||||||||||||| ||||| ||||||||||||||||     
T  14265162 agtaaacctcacccttaccttaaatcagatgaacaatctctaca--aattctggttctcttggctcttctcccttgttcttgatttttctcccaaaactc 14265065  T
Q  202 tgttttacgtgaaactgcttctgactt-tctatttttcctaactcccaatattaact-ccctttatttcacttaactccctctcaatttctatttattct 299  Q
    |||| ||||| ||||   ||||||||| ||| |||||||| ||||| | | |||||| |||||||||||| ||||||||| || || ||||||| |||||    
T  14265064 tgttgtacgtaaaacaatttctgacttctct-tttttccttactcctattcttaactcccctttatttcatttaactcccccttaa-ttctattaattct 14264967  T
Q  300 aatttaatc 308  Q
    |||||||||    
T  14264966 aatttaatc 14264958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 103 - 227
Target Start/End: Complemental strand, 41781069 - 41780942
Alignment:
Q  103 agtaaacctcacccttaccttaattcagatgaacaatttctacataa----aatctggttctcttggctcttctcccttgctcttggtttttctcccaaa 198  Q
    ||||||| ||||||||||||||||||||| ||||||  |||||| ||    |||||  | ||||||||||  |||||||| |||||||||||||||||||    
T  41781069 agtaaacttcacccttaccttaattcagacgaacaagctctacaaaatcagaatcttct-ctcttggctcccctcccttgttcttggtttttctcccaaa 41780971  T
Q  199 acttgttttacgtgaaactgcttctgact 227  Q
    |||||||||||||||||||||||||||||    
T  41780970 acttgttttacgtgaaactgcttctgact 41780942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 71 - 124
Target Start/End: Complemental strand, 35961932 - 35961879
Alignment:
Q  71 tcaaaatcagaattcataacatatacaattgcagtaaacctcacccttacctta 124  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  35961932 tcaaaatcagaattcagaacctatacaattgcagtaaacctcacccttacctta 35961879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 12555499 - 12555543
Alignment:
Q  157 ttctcttggctcttctcccttgctcttggtttttctcccaaaact 201  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  12555499 ttctcttggctcttctcccttgctcttggtttttctcccaaaact 12555543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 106 - 201
Target Start/End: Complemental strand, 14168706 - 14168613
Alignment:
Q  106 aaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctcttctcccttgctcttggtttttctcccaaaact 201  Q
    |||||||||||||||||||||||||| | |||| | | ||| |  ||| | |||||||||||||||||||||||||||||||||||||| ||||||    
T  14168706 aaacctcacccttaccttaattcagaaggacaaatgc-aca-acgatcggattctcttggctcttctcccttgctcttggtttttctccaaaaact 14168613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 106 - 201
Target Start/End: Complemental strand, 14172953 - 14172860
Alignment:
Q  106 aaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctcttctcccttgctcttggtttttctcccaaaact 201  Q
    |||||||||||||||||||||||||| | |||| | | ||| |  ||| | |||||||||||||||||||||||||||||||||||||| ||||||    
T  14172953 aaacctcacccttaccttaattcagaaggacaaatgc-aca-acgatcggattctcttggctcttctcccttgctcttggtttttctccaaaaact 14172860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 72 - 124
Target Start/End: Original strand, 15339804 - 15339856
Alignment:
Q  72 caaaatcagaattcataacatatacaattgcagtaaacctcacccttacctta 124  Q
    ||||||||||||||| ||| ||||||||||| |||||||||||||||||||||    
T  15339804 caaaatcagaattcagaacctatacaattgcggtaaacctcacccttacctta 15339856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 145
Target Start/End: Original strand, 12695606 - 12695648
Alignment:
Q  103 agtaaacctcacccttaccttaattcagatgaacaatttctac 145  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  12695606 agtaaacctcacccttaccttaaatcagatgaacaatttctac 12695648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 124
Target Start/End: Complemental strand, 14287317 - 14287267
Alignment:
Q  74 aaatcagaattcataacatatacaattgcagtaaacctcacccttacctta 124  Q
    ||||||||||||| ||| ||||||||||| |||||||||||||||||||||    
T  14287317 aaatcagaattcagaacctatacaattgcggtaaacctcacccttacctta 14287267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 72 - 177
Target Start/End: Original strand, 15143187 - 15143290
Alignment:
Q  72 caaaatcagaattcataacatatacaattgcagtaaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctcttc 171  Q
    ||||||||||||| | ||  ||||| | || |||||||||||||||||||||| |||||||||||||  ||   | ||||||| |||| |||||||||||    
T  15143187 caaaatcagaattaaaaatctatactactgaagtaaacctcacccttaccttatttcagatgaacaa--tcataacaaaatctagttcacttggctcttc 15143284  T
Q  172 tccctt 177  Q
    ||||||    
T  15143285 tccctt 15143290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 71 - 124
Target Start/End: Complemental strand, 11219327 - 11219274
Alignment:
Q  71 tcaaaatcagaattcataacatatacaattgcagtaaacctcacccttacctta 124  Q
    |||||||||||||||| ||  ||||||||||||||||||||||||| |||||||    
T  11219327 tcaaaatcagaattcagaatctatacaattgcagtaaacctcacccctacctta 11219274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 71 - 124
Target Start/End: Complemental strand, 17181910 - 17181857
Alignment:
Q  71 tcaaaatcagaattcataacatatacaattgcagtaaacctcacccttacctta 124  Q
    |||||||||||||||| ||  ||||||||||| |||||||||||||||||||||    
T  17181910 tcaaaatcagaattcagaatctatacaattgcggtaaacctcacccttacctta 17181857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 173 - 249
Target Start/End: Original strand, 19617473 - 19617549
Alignment:
Q  173 cccttgctcttggtttt-tctcccaaaacttgttttacgtgaaactgcttctgactttctatttttcctaactcccaa 249  Q
    |||||| |||||||||| ||||||||||||||||| |||| |||||||||||||| || |  ||||||||||||||||    
T  19617473 cccttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacctt-ttcttttcctaactcccaa 19617549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 72 - 124
Target Start/End: Complemental strand, 15722410 - 15722358
Alignment:
Q  72 caaaatcagaattcataacatatacaattgcagtaaacctcacccttacctta 124  Q
    ||||||||||||||| ||  ||||||||||| |||||||||||||||||||||    
T  15722410 caaaatcagaattcagaatctatacaattgcggtaaacctcacccttacctta 15722358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 72 - 124
Target Start/End: Original strand, 19600777 - 19600829
Alignment:
Q  72 caaaatcagaattcataacatatacaattgcagtaaacctcacccttacctta 124  Q
    ||||||||||||||| ||| || |||||||| |||||||||||||||||||||    
T  19600777 caaaatcagaattcagaacctacacaattgcggtaaacctcacccttacctta 19600829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 71 - 138
Target Start/End: Complemental strand, 14580748 - 14580681
Alignment:
Q  71 tcaaaatcagaattcataacatatacaattgcagtaaacctcacccttaccttaattcagatgaacaa 138  Q
    |||||||||||||| | ||  ||||| | || || |||||||||||||||||||||||||||||||||    
T  14580748 tcaaaatcagaattaaaaatctatactactgaagcaaacctcacccttaccttaattcagatgaacaa 14580681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 106 - 169
Target Start/End: Complemental strand, 16073218 - 16073156
Alignment:
Q  106 aaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctct 169  Q
    |||||||||||||||||||| ||||||||||||| |||| | ||||||||| || |||||||||    
T  16073218 aaacctcacccttaccttaaatcagatgaacaatctcta-acaaaatctgggtcacttggctct 16073156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 181 - 279
Target Start/End: Complemental strand, 23664061 - 23663960
Alignment:
Q  181 cttggtttt-tctcccaaaacttgttttacgtgaaactgcttctgactttctatttttcctaactcccaatat-taactc--cctttatttcacttaact 276  Q
    ||||||||| ||||||||||||||||| |||| ||||||||||| || ||||  |||||||||||||||| || ||||||  ||||||||||| | ||||    
T  23664061 cttggttttctctcccaaaacttgtttcacgtaaaactgcttctaaccttct-cttttcctaactcccaaaatataactcctcctttatttcattaaact 23663963  T
Q  277 ccc 279  Q
    |||    
T  23663962 ccc 23663960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 103 - 138
Target Start/End: Original strand, 38829162 - 38829197
Alignment:
Q  103 agtaaacctcacccttaccttaattcagatgaacaa 138  Q
    ||||||||||||||||||||||||||||||||||||    
T  38829162 agtaaacctcacccttaccttaattcagatgaacaa 38829197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 246
Target Start/End: Original strand, 14113445 - 14113519
Alignment:
Q  173 cccttgctcttggtttt-tctcccaaaacttgttttacgtgaaactgcttctgactttctatttttcctaactcc 246  Q
    |||||| ||||| |||| ||||||||||||||||| |||| |||||||||||||| || | |||||||| |||||    
T  14113445 cccttgttcttgattttctctcccaaaacttgtttcacgtaaaactgcttctgaccttttctttttcctcactcc 14113519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 124
Target Start/End: Complemental strand, 14280851 - 14280801
Alignment:
Q  74 aaatcagaattcataacatatacaattgcagtaaacctcacccttacctta 124  Q
    ||||||||||||| ||| ||||||||||| || ||||||||||||||||||    
T  14280851 aaatcagaattcagaacctatacaattgcggtcaacctcacccttacctta 14280801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 246
Target Start/End: Original strand, 14423096 - 14423170
Alignment:
Q  173 cccttgctcttggtttt-tctcccaaaacttgttttacgtgaaactgcttctgactttctatttttcctaactcc 246  Q
    |||||| ||||| |||| ||||||||||||||||| |||| |||||||||||||| || | |||||||| |||||    
T  14423096 cccttgttcttgattttctctcccaaaacttgtttcacgtaaaactgcttctgaccttttctttttcctcactcc 14423170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 249
Target Start/End: Original strand, 18873479 - 18873548
Alignment:
Q  180 tcttggtttt-tctcccaaaacttgttttacgtgaaactgcttctgactttctatttttcctaactcccaa 249  Q
    |||||||||| ||||||||||||||||| |||| |||||||||||||| || |  ||||||||||||||||    
T  18873479 tcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacctt-ttcttttcctaactcccaa 18873548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 249
Target Start/End: Original strand, 11304303 - 11304371
Alignment:
Q  181 cttggtttt-tctcccaaaacttgttttacgtgaaactgcttctgactttctatttttcctaactcccaa 249  Q
    ||||||||| ||||||||||||||||| |||| ||||||||||| || ||||  ||||||||||||||||    
T  11304303 cttggttttctctcccaaaacttgtttcacgtaaaactgcttctaaccttct-cttttcctaactcccaa 11304371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 124
Target Start/End: Original strand, 14129178 - 14129231
Alignment:
Q  71 tcaaaatcagaattcataacatatacaattgcagtaaacctcacccttacctta 124  Q
    |||||||||||| ||| ||| ||||||||||| ||||| |||||||||||||||    
T  14129178 tcaaaatcagaactcagaacctatacaattgcggtaaatctcacccttacctta 14129231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 124
Target Start/End: Original strand, 14136024 - 14136077
Alignment:
Q  71 tcaaaatcagaattcataacatatacaattgcagtaaacctcacccttacctta 124  Q
    |||||||||||| ||| ||| ||||||||||| ||||| |||||||||||||||    
T  14136024 tcaaaatcagaactcagaacctatacaattgcggtaaatctcacccttacctta 14136077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 124
Target Start/End: Original strand, 14432996 - 14433049
Alignment:
Q  71 tcaaaatcagaattcataacatatacaattgcagtaaacctcacccttacctta 124  Q
    |||||||||||| ||| ||| ||||||||||| ||||| |||||||||||||||    
T  14432996 tcaaaatcagaactcagaacctatacaattgcggtaaatctcacccttacctta 14433049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 15140135 - 15140172
Alignment:
Q  1 tattaaatcaaccaattacaacttataaacctaattcc 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  15140135 tattaaatcaaccaattacaacttttaaacctaattcc 15140172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 249
Target Start/End: Original strand, 29797665 - 29797733
Alignment:
Q  181 cttggtttt-tctcccaaaacttgttttacgtgaaactgcttctgactttctatttttcctaactcccaa 249  Q
    ||||||||| ||||||||||||||||| |||| ||||||||||| || ||||  ||||||||||||||||    
T  29797665 cttggttttctctcccaaaacttgtttcacgtaaaactgcttctaaccttct-cttttcctaactcccaa 29797733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 249
Target Start/End: Original strand, 29801484 - 29801552
Alignment:
Q  181 cttggtttt-tctcccaaaacttgttttacgtgaaactgcttctgactttctatttttcctaactcccaa 249  Q
    ||||||||| ||||||||||||||||| |||| ||||||||||| || ||||  ||||||||||||||||    
T  29801484 cttggttttctctcccaaaacttgtttcacgtaaaactgcttctaaccttct-cttttcctaactcccaa 29801552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 3328855 - 3328899
Alignment:
Q  157 ttctcttggctcttctcccttgctcttggtttttctcccaaaact 201  Q
    ||||||||| ||||||| |||||||||||||||||||| ||||||    
T  3328855 ttctcttggttcttctctcttgctcttggtttttctccaaaaact 3328899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 179 - 279
Target Start/End: Original strand, 7530233 - 7530336
Alignment:
Q  179 ctcttggtttttctcccaaaacttgttt-tacgtg-aaactgcttctgactt-tctatttttcctaactcccaatattaact-ccctttatttcacttaa 274  Q
    |||||||||||||||| ||||||||||| |||||| |||| ||||||||||| || |||||| |||||||| ||  |||||| |||||||||| | ||||    
T  7530233 ctcttggtttttctcctaaaacttgtttgtacgtgaaaaccgcttctgacttctcaattttt-ctaactcctaaacttaactcccctttattttatttaa 7530331  T
Q  275 ctccc 279  Q
    |||||    
T  7530332 ctccc 7530336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 8135367 - 8135331
Alignment:
Q  1 tattaaatcaaccaattacaacttataaacctaattc 37  Q
    |||||||||||||||||||||||| ||||||||||||    
T  8135367 tattaaatcaaccaattacaacttctaaacctaattc 8135331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 72 - 124
Target Start/End: Complemental strand, 23200693 - 23200641
Alignment:
Q  72 caaaatcagaattcataacatatacaattgcagtaaacctcacccttacctta 124  Q
    ||||||||||||||| ||| ||||  ||||| |||||||||||||||||||||    
T  23200693 caaaatcagaattcagaacctataagattgcggtaaacctcacccttacctta 23200641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 72 - 124
Target Start/End: Complemental strand, 23506820 - 23506768
Alignment:
Q  72 caaaatcagaattcataacatatacaattgcagtaaacctcacccttacctta 124  Q
    ||||||||||||||| ||| ||||  ||||| |||||||||||||||||||||    
T  23506820 caaaatcagaattcagaacctataagattgcggtaaacctcacccttacctta 23506768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 106 - 138
Target Start/End: Original strand, 45186457 - 45186489
Alignment:
Q  106 aaacctcacccttaccttaattcagatgaacaa 138  Q
    |||||||||||||||||||||||||||||||||    
T  45186457 aaacctcacccttaccttaattcagatgaacaa 45186489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 131
Target Start/End: Complemental strand, 5186455 - 5186416
Alignment:
Q  92 tatacaattgcagtaaacctcacccttaccttaattcaga 131  Q
    ||||| |||| |||||||||||||||||||||||||||||    
T  5186455 tatactattgaagtaaacctcacccttaccttaattcaga 5186416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 279
Target Start/End: Original strand, 15726443 - 15726546
Alignment:
Q  179 ctcttggtttttctccc-aaaacttgttttacgtgaaactgcttctgactt-tctatttttcctaactcccaatattaac-tccctttatttcacttaac 275  Q
    ||||||||||||||||| ||||||  || |||||||||||||||| ||||| || |||||| |||||||| ||  ||| | ||||||||||||| | |||    
T  15726443 ctcttggtttttctcccaaaaactgattgtacgtgaaactgcttcagacttctcaattttttctaactcctaaacttagcttccctttatttcattcaac 15726542  T
Q  276 tccc 279  Q
    ||||    
T  15726543 tccc 15726546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 169
Target Start/End: Complemental strand, 16069654 - 16069592
Alignment:
Q  106 aaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctct 169  Q
    |||||||||||||||||||| ||||||||||||| |||| | |||||||||  | |||||||||    
T  16069654 aaacctcacccttaccttaaatcagatgaacaatctcta-acaaaatctgggccacttggctct 16069592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 2 - 40
Target Start/End: Complemental strand, 708559 - 708521
Alignment:
Q  2 attaaatcaaccaattacaacttataaacctaattccta 40  Q
    |||||| |||||||||||||||| |||||||||||||||    
T  708559 attaaaacaaccaattacaacttctaaacctaattccta 708521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 159 - 223
Target Start/End: Original strand, 13898561 - 13898629
Alignment:
Q  159 ctcttggctcttctcc---cttgctcttggtttttctcccaaaacttgtttt-acgtgaaactgcttct 223  Q
    ||||||||||||||||   ||| ||| |||||||||||||||||  |||||| ||||||||||||||||    
T  13898561 ctcttggctcttctcctagctttctcatggtttttctcccaaaaactgtttttacgtgaaactgcttct 13898629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 159 - 223
Target Start/End: Original strand, 15214643 - 15214711
Alignment:
Q  159 ctcttggctcttctcc---cttgctcttggtttttctccc-aaaacttgttttacgtgaaactgcttct 223  Q
    |||||||||||||||    ||| ||||||||||||||||| ||||||  ||||||||||||||||||||    
T  15214643 ctcttggctcttctcgtagctttctcttggtttttctcccaaaaactgtttttacgtgaaactgcttct 15214711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 3 - 37
Target Start/End: Complemental strand, 17070418 - 17070384
Alignment:
Q  3 ttaaatcaaccaattacaacttataaacctaattc 37  Q
    |||||||||||||||||||||| ||||||||||||    
T  17070418 ttaaatcaaccaattacaacttctaaacctaattc 17070384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 138
Target Start/End: Original strand, 4994387 - 4994416
Alignment:
Q  109 cctcacccttaccttaattcagatgaacaa 138  Q
    ||||||||||||||||||||||||||||||    
T  4994387 cctcacccttaccttaattcagatgaacaa 4994416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 15095767 - 15095730
Alignment:
Q  1 tattaaatcaaccaattacaacttataaacctaattcc 38  Q
    |||||||||||| ||||||||||| |||||||||||||    
T  15095767 tattaaatcaactaattacaacttctaaacctaattcc 15095730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 108; Significance: 7e-54; HSPs: 2)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 103 - 308
Target Start/End: Original strand, 24011 - 24215
Alignment:
Q  103 agtaaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctcttctcccttgctcttggtttttctcccaaaactt 202  Q
    |||||||||||||||||||||||||||||||| ||| ||||||| ||  | |||||| ||||||||||||||||||  ||||||||||||||||||||||    
T  24011 agtaaacctcacccttaccttaattcagatgagcaaattctacagaattt-tggttcacttggctcttctcccttgtccttggtttttctcccaaaactt 24109  T
Q  203 gttttacgtgaaactgcttctgactttctatttttcctaactcccaata-ttaactcc-ctttatttcacttaactccctctcaatttctatttattcta 300  Q
    |||||||||||||||||||||||| |||   |||||||||||||||||| |||||||| |||||||||| | |||||||||| || ||||||| ||||||    
T  24110 gttttacgtgaaactgcttctgaccttc-ccttttcctaactcccaatacttaactccgctttatttcattcaactccctcttaa-ttctattaattcta 24207  T
Q  301 atttaatc 308  Q
    ||||||||    
T  24208 atttaatc 24215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266; HSP #2
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 106 - 308
Target Start/End: Original strand, 13459 - 13660
Alignment:
Q  106 aaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctcttctcccttgctcttggtttttctcccaaaacttgtt 205  Q
    ||||||||||||||||||||||||||||| ||| ||||||| ||  |||||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  13459 aaacctcacccttaccttaattcagatgagcaaattctacagaat-tctggttcacttggctcttctcccttgttcttggtttttctcccaaaacttgtt 13557  T
Q  206 ttacgtgaaactgcttctgactttctatttttcctaactcccaata-ttaact-ccctttatttcacttaactccctctcaatttctatttattctaatt 303  Q
    |||| |||||||||||| ||| |||   |||||||||||||||||| |||||| |||||||||||| ||||||| |||| || ||||||| |||||||||    
T  13558 ttacatgaaactgcttccgaccttc-ccttttcctaactcccaatacttaactcccctttatttcatttaactctctcttaa-ttctattaattctaatt 13655  T
Q  304 taatc 308  Q
    |||||    
T  13656 taatc 13660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 106; Significance: 1e-52; HSPs: 3)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 103 - 308
Target Start/End: Original strand, 143679 - 143881
Alignment:
Q  103 agtaaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctcttctcccttgctcttggtttttctcccaaaactt 202  Q
    ||||||||||||||| ||||||| ||||||||||||| ||||||  || |||||||| ||||| |||||||||||| |||||||||||||||||||||||    
T  143679 agtaaacctcaccctgaccttaaatcagatgaacaatctctaca--aattctggttcacttggatcttctcccttgttcttggtttttctcccaaaactt 143776  T
Q  203 gttttacgtgaaactgcttctgactttctatttttcctaactcccaata-ttaact-ccctttatttcacttaactccctctcaatttctatttattcta 300  Q
    |||||| ||||||||||||||||||| |   |||||||||||||||||| |||||| |||||||||||| |||||||||| | || ||||||| ||||||    
T  143777 gttttatgtgaaactgcttctgacttcc--cttttcctaactcccaatacttaactcccctttatttcatttaactccctattaa-ttctattaattcta 143873  T
Q  301 atttaatc 308  Q
    ||||||||    
T  143874 atttaatc 143881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 103 - 177
Target Start/End: Original strand, 36578 - 36655
Alignment:
Q  103 agtaaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttct----cttggctcttctccctt 177  Q
    ||||||||||||||||||||||||||||| ||||||  |||||| ||| |||||||||    |||||||||||||||||    
T  36578 agtaaacctcacccttaccttaattcagacgaacaaactctaca-aaattctggttctcttacttggctcttctccctt 36655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 121379 - 121323
Alignment:
Q  161 cttggctcttctcccttgctcttggtttt-tctcccaaaacttgttttacgtgaaac 216  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||| |||| ||||    
T  121379 cttggctcttctcccttgttcttggttttctctcccaaaacttgtttcacgtaaaac 121323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 102; Significance: 3e-50; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 109 - 303
Target Start/End: Original strand, 5918 - 6114
Alignment:
Q  109 cctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctcttctcccttgctcttggtttttctcccaaaacttgtttta 208  Q
    ||||||||||||||||||||||||||| |||  ||||| ||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  5918 cctcacccttaccttaattcagatgaaaaatccctacagaaa-tctggttctcttggctcttctcccttgttcttggtttttctcccaaaacttgtttta 6016  T
Q  209 cgtgaaactgcttctgactttctatttttcctaact-cccaata-ttaactccc---tttatttcacttaactccctctcaatttctatttattctaatt 303  Q
    ||||||||||||||||||||| |  | ||||||||| ||||| | |||||||||   |||||||||||||||||||||| || ||||||| |||||||||    
T  6017 cgtgaaactgcttctgacttt-ttctattcctaactccccaacacttaactcccctttttatttcacttaactccctcttaa-ttctattaattctaatt 6114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 99; Significance: 2e-48; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 103 - 308
Target Start/End: Original strand, 71573 - 71777
Alignment:
Q  103 agtaaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctcttctcccttgctcttggtttttctcccaaaactt 202  Q
    |||||| |||||||||||||||||||||||||| ||  |||| | ||| ||||||||| ||||||||| ||||||| |||||||| ||||||||||||||    
T  71573 agtaaatctcacccttaccttaattcagatgaataaactctatagaaa-tctggttctattggctcttttcccttgttcttggttcttctcccaaaactt 71671  T
Q  203 gttttacgtgaaactgcttctgactttctatttttcctaactcccaatattaact-ccctttatttcacttaactccctctcaatttctatttattctaa 301  Q
    ||||||||||||||||||||||||||    |||||||||||||| | | |||||| |||||||||||| |||||||||||| || ||||||| ||| |||    
T  71672 gttttacgtgaaactgcttctgacttctcctttttcctaactcctattcttaactcccctttatttcatttaactccctcttaa-ttctattaattataa 71770  T
Q  302 tttaatc 308  Q
    |||||||    
T  71771 tttaatc 71777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 94; Significance: 2e-45; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 103 - 310
Target Start/End: Original strand, 26448 - 26655
Alignment:
Q  103 agtaaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctcttctcccttgctcttggtttttctcccaaaactt 202  Q
    ||||||| ||||||||||||| | ||||||||||||  |||||| ||| ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  26448 agtaaacgtcacccttaccttgaatcagatgaacaaactctaca-aaattctggttctcttggctcttctcccttgttcttggtttttctcccaaaactt 26546  T
Q  203 g-ttttacgtgaaactgcttctgactttctatttttcctaactcccaatattaactccc-tttatttcacttaactccctctcaatttctatttattcta 300  Q
    | || ||||| |||||||||||||| |    |||||||||||||| | | ||||||||| ||||||||| ||||||| |||| || ||||||| ||||||    
T  26547 gattgtacgtaaaactgcttctgacctctcctttttcctaactcctattcttaactcccttttatttcatttaactctctcttaa-ttctattaattcta 26645  T
Q  301 atttaatctc 310  Q
    ||||||||||    
T  26646 atttaatctc 26655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 92; Significance: 3e-44; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 103 - 308
Target Start/End: Complemental strand, 5941 - 5734
Alignment:
Q  103 agtaaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctcttctcccttgctcttggtttttctcccaaaa-ct 201  Q
    ||||||||||||||||||||||| |||||||||||| ||||||| ||| |||||||| |||||||||| ||||||| |||||||||||||||||||| ||    
T  5941 agtaaacctcacccttaccttaaatcagatgaacaaattctacagaaa-tctggttcacttggctcttttcccttgttcttggtttttctcccaaaagct 5843  T
Q  202 -tgttttacgtgaaactgcttctgactttctatttttcctaactcccaata-ttaact--ccctttatttcacttaactccctctcaatttctatttatt 297  Q
     |||| ||||| |||| | ||||||||||||  ||||||||||||| || | ||||||  ||||||||||||||||||||||||| || ||||||| |||    
T  5842 ctgttgtacgtaaaaccgtttctgactttct-cttttcctaactccaaacacttaactccccctttatttcacttaactccctcttaa-ttctattaatt 5745  T
Q  298 ctaatttaatc 308  Q
    |||||||||||    
T  5744 ctaatttaatc 5734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 84; Significance: 2e-39; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 103 - 308
Target Start/End: Complemental strand, 40818 - 40615
Alignment:
Q  103 agtaaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctcttctcccttgctcttggtttttctcccaaaactt 202  Q
    ||||||||||||||||||||||| ||||||||||||  |||||| ||  |||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  40818 agtaaacctcacccttaccttaaatcagatgaacaaactctacagaat-tctgattctcttggctcttctcccttgttcttggtttttctcccaaaactt 40720  T
Q  203 g-ttttacgtgaaactgcttctgactttctatttttcctaactcccaatattaact-ccctttatttcacttaactccctctcaatttctatttattcta 300  Q
    | || ||||| ||||||||||||||  |||  ||||||||||||| ||  |||||| |||||||||||| |||||||| ||| || ||||||| ||||||    
T  40719 gattgtacgtaaaactgcttctgac-ctctccttttcctaactcctaa-cttaactcccctttatttcatttaactccatcttaa-ttctattaattcta 40623  T
Q  301 atttaatc 308  Q
    ||| ||||    
T  40622 attaaatc 40615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 173 - 249
Target Start/End: Complemental strand, 12983 - 12907
Alignment:
Q  173 cccttgctcttggtttt-tctcccaaaacttgttttacgtgaaactgcttctgactttctatttttcctaactcccaa 249  Q
    |||||| |||||||||| ||||||||||||||||| |||| |||||||||||||| || |  ||||||||||||||||    
T  12983 cccttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacctt-ttcttttcctaactcccaa 12907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 83; Significance: 6e-39; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 109 - 308
Target Start/End: Original strand, 9174 - 9374
Alignment:
Q  109 cctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctcttctcccttgctcttggtttttctcccaaaacttgtttta 208  Q
    ||||||||||||||||||||||||||| |||  ||||  ||| ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  9174 cctcacccttaccttaattcagatgaaaaatccctacggaaa-tctggttctcttggctctt-tcccttgttcttggtttttctcccaaaacttgtttta 9271  T
Q  209 cgtgaaactgcttctgactttctatttttcctaact-cccaata-ttaactccc---tttatttcacttaactccctctcaatttctatttattctaatt 303  Q
    ||||||| ||||||||||||| |  | ||| ||||| ||||| | |||||||||   |||||||||||||||||||||| || ||||||| |||||||||    
T  9272 cgtgaaattgcttctgacttt-ttctattcataactccccaacacttaactcccctttttatttcacttaactccctcttaa-ttctattaattctaatt 9369  T
Q  304 taatc 308  Q
     ||||    
T  9370 aaatc 9374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0583 (Bit Score: 82; Significance: 2e-38; HSPs: 1)
Name: scaffold0583
Description:

Target: scaffold0583; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 152 - 308
Target Start/End: Original strand, 5489 - 5645
Alignment:
Q  152 tctggttctcttggctcttctcccttgctcttggtttttctcccaaaacttgttttacgtgaaactgcttctgactttctatttttcctaactcccaata 251  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||    |||||||||||||| | |     
T  5489 tctggttctcttggctcttctcccttgttcttggtttttctcccaaaacttgttttacgtgaaactgcttttgacttctcctttttcctaactcctattc 5588  T
Q  252 ttaact-ccctttatttcacttaactccctctcaatttctatttattctaatttaatc 308  Q
    |||||| |||||||||| | ||||||  |||| || ||||||| ||||||||||||||    
T  5589 ttaactcccctttattttaattaactttctcttaa-ttctattaattctaatttaatc 5645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 82; Significance: 2e-38; HSPs: 1)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 103 - 308
Target Start/End: Complemental strand, 8389 - 8183
Alignment:
Q  103 agtaaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctcttctcccttgctcttggtttttctcccaaaac-- 200  Q
    ||||||||||||||||||| ||| ||||||||||||| |||||   || ||||| ||||||||||||||||||||| ||||||||||||| |||||||      
T  8389 agtaaacctcacccttaccgtaaatcagatgaacaatctctacg--aattctggctctcttggctcttctcccttgttcttggtttttctaccaaaacct 8292  T
Q  201 ttgttttacgtgaaactgcttctgactttctatttttcctaactcccaata-ttaactccc--tttatttcacttaactccctctcaatttctatttatt 297  Q
     |||| ||| | |||| | ||||||||||||  |||||||||||||||| | |||||||||  |||||||||||||||||||||| || ||||||| |||    
T  8291 ctgttgtacataaaacagtttctgactttct-cttttcctaactcccaacacttaactccccatttatttcacttaactccctcttaa-ttctattaatt 8194  T
Q  298 ctaatttaatc 308  Q
    |||||||||||    
T  8193 ctaatttaatc 8183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 79; Significance: 1e-36; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 103 - 308
Target Start/End: Complemental strand, 124090 - 123885
Alignment:
Q  103 agtaaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctcttctcccttgctcttggtttttctcccaaaa-ct 201  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||  || ||||||||||||| ||||||||||||| |||||||||||||||||||| ||    
T  124090 agtaaacctcacccttaccttaaatcagatgaacaatctctaca--aattctggttctcttgactcttctcccttgttcttggtttttctcccaaaagct 123993  T
Q  202 -tgttttacgtgaaactgcttctga-ctttctatttttcctaactcccaatattaact-ccctttatttcacttaactccctctcaatttctatttattc 298  Q
     |||| ||||| |||| | |||||| || ||| |||| ||||||||| ||  |||||| |||||||||||| |||||||||||| || ||||||| ||||    
T  123992 ctgttgtacgtaaaacagtttctgacctctct-ttttccctaactcctaaacttaactcccctttatttcatttaactccctcttaa-ttctattaattc 123895  T
Q  299 taatttaatc 308  Q
    || |||||||    
T  123894 tagtttaatc 123885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 223
Target Start/End: Complemental strand, 11346 - 11301
Alignment:
Q  179 ctcttggtttttctcccaaaacttgttt-tacgtgaaactgcttct 223  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||    
T  11346 ctcttggtttttctcccaaaaattgtttgtacgtgaaactgcttct 11301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0669 (Bit Score: 77; Significance: 2e-35; HSPs: 1)
Name: scaffold0669
Description:

Target: scaffold0669; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 106 - 308
Target Start/End: Complemental strand, 917 - 717
Alignment:
Q  106 aaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctcttctcccttgctcttggtttttctcccaaaacttg-t 204  Q
    |||||||||||||||||||||||||| ||||||  |||| | ||  ||||||||||||||||||||||||||| |||||||||||||||||||||||| |    
T  917 aaacctcacccttaccttaattcagacgaacaaactctatagaat-tctggttctcttggctcttctcccttgttcttggtttttctcccaaaacttgat 819  T
Q  205 tttacgtgaaactgcttctgactttctatttttcctaactcccaatattaact-ccctttatttcacttaactccctctcaatttctatttattctaatt 303  Q
    | ||||| ||||||||||||||  |||   |||||||||||| ||  |||||| |||||||||| | |||||||||||| || ||||||| ||| |||||    
T  818 tgtacgtaaaactgcttctgac-ctctccctttcctaactcctaa-cttaactcccctttattttatttaactccctcttaa-ttctattaattataatt 722  T
Q  304 taatc 308  Q
    |||||    
T  721 taatc 717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 77; Significance: 2e-35; HSPs: 2)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 106 - 307
Target Start/End: Complemental strand, 2940 - 2740
Alignment:
Q  106 aaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctcttctcccttgctcttggtttttctcccaaaacttgtt 205  Q
    |||||||||||| ||||||| ||  ||||||||| |||||   || ||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  2940 aaacctcaccctcaccttaaatcgaatgaacaatctctacg--aattctggttctcttggctcttctcccttgttcttggtttttctcccaaaacttgtt 2843  T
Q  206 t-tacgtgaaactgcttctgactttctatttttcctaactcccaatattaact-ccctttatttcacttaactccctctcaatttctatttattctaatt 303  Q
    | ||||| |||    |||||||||     ||||||||||||||||  |||||| |||||||||||| |||||||||||| || ||||||| |||||||||    
T  2842 tgtacgtaaaagcagttctgacttctcccttttcctaactcccaaacttaactcccctttatttcatttaactccctcttaa-ttctattaattctaatt 2744  T
Q  304 taat 307  Q
    ||||    
T  2743 taat 2740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 72 - 124
Target Start/End: Original strand, 95729 - 95781
Alignment:
Q  72 caaaatcagaattcataacatatacaattgcagtaaacctcacccttacctta 124  Q
    ||||||||||||||| ||| ||||  ||||| |||||||||||||||||||||    
T  95729 caaaatcagaattcagaacgtataagattgcggtaaacctcacccttacctta 95781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 77; Significance: 2e-35; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 72 - 269
Target Start/End: Original strand, 25268189 - 25268386
Alignment:
Q  72 caaaatcagaattcataacatatacaattgcagtaaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctcttc 171  Q
    ||||||||||||||| ||  ||||| | || || |||||||||||||||||||||||||| | ||||| |||| | |||||| || ||||||||||||||    
T  25268189 caaaatcagaattcaaaaactatactactgaagcaaacctcacccttaccttaattcagaaggacaatctcta-acaaaatccgggtctcttggctcttc 25268287  T
Q  172 tcccttgctcttggtttttctcccaaaacttgttt-tacgtgaaactgcttctgactttctatttttcctaact-cccaatattaactcc-ctttatttc 268  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||    ||||||| ||||  ||||||||||| ||||||||||||||| |||||||||    
T  25268288 tcccttgctcttggtttttctcccaaaacttgtttgtacgtaaaagcagttctgac-ttct-cttttcctaactccccaatattaactccactttatttc 25268385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 152 - 308
Target Start/End: Original strand, 17634950 - 17635108
Alignment:
Q  152 tctggttctcttggctcttctcccttgctcttggtttttctcccaaaact-tgttttacgtgaaactgcttctgactttctatttttcctaactcccaat 250  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||| |||| ||||| |||| | ||||||||||||  ||||||||||||||||     
T  17634950 tctggttctcttggctcttctcccttgttcttggtttttctcccaaaactctgttgtacgtaaaacagtttctgactttct-cttttcctaactcccaac 17635048  T
Q  251 a-ttaact--ccctttatttcacttaactccctctcaatttctatttattctaatttaatc 308  Q
    | ||||||  ||||||||||||||||||||||||| ||  |||||| ||||||||| ||||    
T  17635049 acttaactccccctttatttcacttaactccctcttaa-atctattaattctaattaaatc 17635108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 103 - 199
Target Start/End: Complemental strand, 21120780 - 21120686
Alignment:
Q  103 agtaaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctcttctcccttgctcttggtttttctcccaaaa 199  Q
    ||||||| |||| ||||||||||||||||||||||| ||||||| ||  ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  21120780 agtaaacatcactcttaccttaattcagatgaacaaattctacagaa--tctggttctcttggctcttctcccttgttcttggtttttctcccaaaa 21120686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 103 - 226
Target Start/End: Complemental strand, 25365082 - 25364959
Alignment:
Q  103 agtaaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctcttctcccttgctcttggtttttctcccaaaactt 202  Q
    ||||||||||||||||||||||| ||||||||||||  ||||||  || ||||||||||| |||||||||||| |  |||| ||||| ||||||||||||    
T  25365082 agtaaacctcacccttaccttaaatcagatgaacaaactctaca-gaattctggttctctcggctcttctcccattatcttcgttttcctcccaaaactt 25364984  T
Q  203 g-ttttacgtgaaactgcttctgac 226  Q
    | || ||||| ||||||||||||||    
T  25364983 gattgtacgtaaaactgcttctgac 25364959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 106 - 228
Target Start/End: Original strand, 20649097 - 20649219
Alignment:
Q  106 aaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctcttctcccttgctcttggtttttctcccaaaacttgtt 205  Q
    ||||||||||||||||||||||||||   |||| | | |||  || ||  |||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  20649097 aaacctcacccttaccttaattcagaaagacaaatgc-acaacaattcaagttcacttggttcttctcccttgctcttggtttttctcccaaaacttgtt 20649195  T
Q  206 tt-acgtgaaactgcttctgactt 228  Q
    || |||| ||||||||||||||||    
T  20649196 ttcacgtaaaactgcttctgactt 20649219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 169 - 279
Target Start/End: Original strand, 23086483 - 23086595
Alignment:
Q  169 ttctcccttgctcttggtttttctcccaaaact-tgttttacgtgaaactgcttctgactttctatttttcctaactcccaatattaact-ccctttatt 266  Q
    ||||||| | ||||||||||||||||||||||| |||| ||||||||||||||||||||||  || ||||||||||||| ||  |||||| |||||||||    
T  23086483 ttctccccttctcttggtttttctcccaaaactctgttgtacgtgaaactgcttctgacttcttaattttcctaactcctaaacttaactcccctttatt 23086582  T
Q  267 tcacttaactccc 279  Q
    | | |||||||||    
T  23086583 ttatttaactccc 23086595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 72 - 175
Target Start/End: Complemental strand, 20913522 - 20913420
Alignment:
Q  72 caaaatcagaattcataacatatacaattgcagtaaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctcttc 171  Q
    ||||||||||||| | ||  ||||| | || ||||||||||||||||||||||| ||||||||||||| |||| | |||||| || ||||||||||||||    
T  20913522 caaaatcagaatttaaaatctatactactgaagtaaacctcacccttaccttaaatcagatgaacaatctcta-acaaaatccgggtctcttggctcttc 20913424  T
Q  172 tccc 175  Q
    ||||    
T  20913423 tccc 20913420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 103 - 201
Target Start/End: Complemental strand, 25106626 - 25106530
Alignment:
Q  103 agtaaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctcttctcccttgctcttggtttttctcccaaaact 201  Q
    |||||||||||||||||||||||||||||   |||||| | ||| |  ||| | |||| ||||||||||||||||||||||||||||||||||||||||    
T  25106626 agtaaacctcacccttaccttaattcagaaagacaattgc-aca-atgatcggattcttttggctcttctcccttgctcttggtttttctcccaaaact 25106530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 72 - 127
Target Start/End: Original strand, 2106549 - 2106604
Alignment:
Q  72 caaaatcagaattcataacatatacaattgcagtaaacctcacccttaccttaatt 127  Q
    |||||| |||||||| ||| ||||||||||| ||||||||||||||||||||||||    
T  2106549 caaaattagaattcagaacctatacaattgcggtaaacctcacccttaccttaatt 2106604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 179 - 288
Target Start/End: Complemental strand, 10039010 - 10038893
Alignment:
Q  179 ctcttggtttttctcccaaaacttgttt-tacgt-----gaaactgcttctgactttctatttttcctaactcccaatattaactccc--tttatttcac 270  Q
    |||||||||||||||||||||||||||| |||||     |||||||||||||||||   | ||||||||||||| ||  |||||||||  ||||||| ||    
T  10039010 ctcttggtttttctcccaaaacttgtttgtacgtgaaacgaaactgcttctgacttctcaattttcctaactcctaaacttaactccccttttattttac 10038911  T
Q  271 ttaactccctctcaattt 288  Q
    ||||||||| || |||||    
T  10038910 ttaactcccacttaattt 10038893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 173 - 249
Target Start/End: Complemental strand, 6743245 - 6743169
Alignment:
Q  173 cccttgctcttggtttt-tctcccaaaacttgttttacgtgaaactgcttctgactttctatttttcctaactcccaa 249  Q
    |||||| |||||||||| ||||||||||||||||| |||| |||||||||||||| || |  ||||||||||||||||    
T  6743245 cccttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacctt-ttcttttcctaactcccaa 6743169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 160 - 201
Target Start/End: Original strand, 22861041 - 22861082
Alignment:
Q  160 tcttggctcttctcccttgctcttggtttttctcccaaaact 201  Q
    |||| |||||||||||||||||||||||||||||||||||||    
T  22861041 tctttgctcttctcccttgctcttggtttttctcccaaaact 22861082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 173 - 249
Target Start/End: Original strand, 43694578 - 43694654
Alignment:
Q  173 cccttgctcttggtttt-tctcccaaaacttgttttacgtgaaactgcttctgactttctatttttcctaactcccaa 249  Q
    |||||| |||||||||| ||||||||||||||||| |||| |||||||||||||| || |  ||||||||||||||||    
T  43694578 cccttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacctt-ttcttttcctaactcccaa 43694654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 103 - 216
Target Start/End: Complemental strand, 38929048 - 38928932
Alignment:
Q  103 agtaaacctcacccttaccttaattcagatgaacaatttctacat----aaaatctggttctcttggctcttctcccttgctcttggtttttctcccaaa 198  Q
    ||||||||||||| ||| |||||||||||||||||| | |||||     | |||||   ||| ||||||||||||||||| |||||||||||||||||||    
T  38929048 agtaaacctcaccattatcttaattcagatgaacaact-ctacaatctcagaatctttctctattggctcttctcccttgttcttggtttttctcccaaa 38928950  T
Q  199 acttgttttacgtgaaac 216  Q
    | |  || ||||||||||    
T  38928949 attgattgtacgtgaaac 38928932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 124
Target Start/End: Complemental strand, 19702683 - 19702630
Alignment:
Q  71 tcaaaatcagaattcataacatatacaattgcagtaaacctcacccttacctta 124  Q
    |||||||||||||||| ||  || ||||||| ||||||||||||||||||||||    
T  19702683 tcaaaatcagaattcagaatctacacaattgaagtaaacctcacccttacctta 19702630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 170 - 279
Target Start/End: Original strand, 6483827 - 6483940
Alignment:
Q  170 tctcccttgctcttggtttttctc--ccaaaacttgttttacgtgaaactgcttctgactttctatttttcctaactcccaatat-taactc--ccttta 264  Q
    |||||||||  |||||||||||||  ||||||||||||| |||| ||||||||||| || || |  |||||||||||||||| || ||||||  ||||||    
T  6483827 tctcccttgtccttggtttttctctcccaaaacttgtttcacgtaaaactgcttctaacctt-ttcttttcctaactcccaaaatataactcctccttta 6483925  T
Q  265 tttcacttaactccc 279  Q
    ||||| | |||||||    
T  6483926 tttcattaaactccc 6483940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 170 - 279
Target Start/End: Original strand, 6487294 - 6487407
Alignment:
Q  170 tctcccttgctcttggtttttctc--ccaaaacttgttttacgtgaaactgcttctgactttctatttttcctaactcccaatat-taactc--ccttta 264  Q
    |||||||||  |||||||||||||  ||||||||||||| |||| ||||||||||| || || |  |||||||||||||||| || ||||||  ||||||    
T  6487294 tctcccttgtccttggtttttctctcccaaaacttgtttcacgtaaaactgcttctaacctt-ttcttttcctaactcccaaaatataactcctccttta 6487392  T
Q  265 tttcacttaactccc 279  Q
    ||||| | |||||||    
T  6487393 tttcattaaactccc 6487407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 158 - 228
Target Start/End: Complemental strand, 24272996 - 24272922
Alignment:
Q  158 tctcttggctcttctcc---cttgctcttggtttttctcccaaaacttgtttt-acgtgaaactgcttctgactt 228  Q
    |||||||||||||||||   ||| ||||||||| |||||||||||  |||||| |||||||||||| ||||||||    
T  24272996 tctcttggctcttctcctagctttctcttggttcttctcccaaaaactgtttttacgtgaaactgcctctgactt 24272922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 161 - 216
Target Start/End: Original strand, 24944404 - 24944460
Alignment:
Q  161 cttggctcttctcccttgctcttggtttt-tctcccaaaacttgttttacgtgaaac 216  Q
    |||||||||| ||||||| |||||||||| ||||||||||||||||| |||| ||||    
T  24944404 cttggctcttttcccttgttcttggttttctctcccaaaacttgtttcacgtaaaac 24944460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 279
Target Start/End: Complemental strand, 10683871 - 10683770
Alignment:
Q  181 cttggtttt-tctcccaaaacttgttttacgtgaaactgcttctgactttctatttttcctaactcccaatat-taactc--cctttatttcacttaact 276  Q
    ||||||||| ||||||||||||||||| |||| ||||||||||| || || |  |||||||||||||||| || ||||||  ||||||||||| | ||||    
T  10683871 cttggttttctctcccaaaacttgtttcacgtaaaactgcttctaacctt-ttcttttcctaactcccaaaatataactcctcctttatttcattaaact 10683773  T
Q  277 ccc 279  Q
    |||    
T  10683772 ccc 10683770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 131
Target Start/End: Complemental strand, 17582657 - 17582618
Alignment:
Q  92 tatacaattgcagtaaacctcacccttaccttaattcaga 131  Q
    ||||| |||| |||||||||||||||||||||||||||||    
T  17582657 tatactattgaagtaaacctcacccttaccttaattcaga 17582618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 279
Target Start/End: Original strand, 20262273 - 20262374
Alignment:
Q  181 cttggtttt-tctcccaaaacttgttttacgtgaaactgcttctgactttctatttttcctaactcccaatat-taactc--cctttatttcacttaact 276  Q
    ||||||||| ||||||||||||||||| |||| ||||||||||| || || |  |||||||||||||||| || ||||||  ||||||||||| | ||||    
T  20262273 cttggttttctctcccaaaacttgtttcacgtaaaactgcttctaacctt-ttcttttcctaactcccaaaatataactcctcctttatttcattaaact 20262371  T
Q  277 ccc 279  Q
    |||    
T  20262372 ccc 20262374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 138
Target Start/End: Original strand, 23149632 - 23149667
Alignment:
Q  103 agtaaacctcacccttaccttaattcagatgaacaa 138  Q
    ||||||||||||||||||||||||||||| ||||||    
T  23149632 agtaaacctcacccttaccttaattcagacgaacaa 23149667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 138
Target Start/End: Original strand, 23561422 - 23561457
Alignment:
Q  103 agtaaacctcacccttaccttaattcagatgaacaa 138  Q
    ||||||||||||||||||||||||||||| ||||||    
T  23561422 agtaaacctcacccttaccttaattcagacgaacaa 23561457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 233 - 311
Target Start/End: Complemental strand, 25351620 - 25351542
Alignment:
Q  233 tttttcctaactcccaatattaactccctt-tatttcacttaactccctctcaatttctatttattctaatttaatctcc 311  Q
    |||||||||||||| | | ||||||||| | ||||||| | |||||||||| |||| ||||| |||||||||||||||||    
T  25351620 tttttcctaactcctattcttaactcccctctatttcattgaactccctcttaatt-ctattaattctaatttaatctcc 25351542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 3 - 37
Target Start/End: Original strand, 3539760 - 3539794
Alignment:
Q  3 ttaaatcaaccaattacaacttataaacctaattc 37  Q
    |||||||||||||||||||||| ||||||||||||    
T  3539760 ttaaatcaaccaattacaacttctaaacctaattc 3539794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 173 - 226
Target Start/End: Original strand, 9243073 - 9243127
Alignment:
Q  173 cccttgctcttggtttt-tctcccaaaacttgttttacgtgaaactgcttctgac 226  Q
    |||||| ||||| |||| ||||||||||||||||| |||| ||||||||||||||    
T  9243073 cccttgttcttgattttctctcccaaaacttgtttcacgtaaaactgcttctgac 9243127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 138
Target Start/End: Complemental strand, 20590291 - 20590262
Alignment:
Q  109 cctcacccttaccttaattcagatgaacaa 138  Q
    ||||||||||||||||||||||||||||||    
T  20590291 cctcacccttaccttaattcagatgaacaa 20590262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 131
Target Start/End: Complemental strand, 22012304 - 22012271
Alignment:
Q  98 attgcagtaaacctcacccttaccttaattcaga 131  Q
    |||| |||||||||||||||||||||||||||||    
T  22012304 attgaagtaaacctcacccttaccttaattcaga 22012271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 138
Target Start/End: Complemental strand, 23338408 - 23338379
Alignment:
Q  109 cctcacccttaccttaattcagatgaacaa 138  Q
    ||||||||||||||||||||||||||||||    
T  23338408 cctcacccttaccttaattcagatgaacaa 23338379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 131
Target Start/End: Complemental strand, 35243727 - 35243694
Alignment:
Q  98 attgcagtaaacctcacccttaccttaattcaga 131  Q
    |||| |||||||||||||||||||||||||||||    
T  35243727 attgaagtaaacctcacccttaccttaattcaga 35243694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 76; Significance: 9e-35; HSPs: 2)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 107 - 308
Target Start/End: Original strand, 553 - 753
Alignment:
Q  107 aacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctcttctcccttgctcttggtttttctcccaaaacttg-tt 205  Q
    ||||||| ||||||||||||||||| ||||||  |||||| ||  | ||||||||||||||||||||||||| |||||||||||||||||||||||| ||    
T  553 aacctcatccttaccttaattcagacgaacaaactctacagaattt-tggttctcttggctcttctcccttgatcttggtttttctcccaaaacttgatt 651  T
Q  206 ttacgtgaaactgcttctgactttctatttttcctaactcccaatattaactccc-tttatttcacttaactccctctcaatttctatttattctaattt 304  Q
     ||||| |||    ||||||| ||||   |||||||||||||||  ||||||||| ||||||||| |||||||||||| || ||||||| ||||||||||    
T  652 gtacgtaaaaacagttctgac-ttctccctttcctaactcccaaacttaactcccttttatttcatttaactccctcttaa-ttctattaattctaattt 749  T
Q  305 aatc 308  Q
    ||||    
T  750 aatc 753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 103 - 203
Target Start/End: Original strand, 18835 - 18934
Alignment:
Q  103 agtaaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctcttctcccttgctcttggtttttctcccaaaactt 202  Q
    |||||| |||||||||||||||||||||| ||||||  |||||| ||  ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  18835 agtaaatctcacccttaccttaattcagacgaacaaactctacagaat-tctggttctcttggctcttctcccttgttcttggtttttctcccaaaactt 18933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 75; Significance: 4e-34; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 103 - 308
Target Start/End: Original strand, 23106209 - 23106415
Alignment:
Q  103 agtaaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctcttctcccttgctcttggtttttctcccaaaact- 201  Q
    ||||||||||||||||||||||| ||||||||||||| |||| | |||||| || ||||||||||||||||||||||||||||||||||||||||||||     
T  23106209 agtaaacctcacccttaccttaaatcagatgaacaatctcta-acaaaatccgggtctcttggctcttctcccttgctcttggtttttctcccaaaactt 23106307  T
Q  202 ---tgttttacgtgaaactgcttctgactttctatttttcctaactcccaata-ttaact-ccctttatttcacttaactccctctcaatttctatttat 296  Q
       ||||  |||| |||| | |||| || ||||  |||||||||||||||||| |||||| |||||||||||| ||||||||| || || ||||||| ||    
T  23106308 gtctgttgcacgtaaaacag-ttctcac-ttct-cttttcctaactcccaatacttaactcccctttatttcatttaactcccccttaa-ttctattaat 23106403  T
Q  297 tctaatttaatc 308  Q
    ||||||| ||||    
T  23106404 tctaattaaatc 23106415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 103 - 177
Target Start/End: Complemental strand, 22797679 - 22797607
Alignment:
Q  103 agtaaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctcttctccctt 177  Q
    |||||||||||||||||||||||||||||||||||||| | ||| |||||||||||| |||||||||||||||||    
T  22797679 agtaaacctcacccttaccttaattcagatgaacaattgc-aca-aaaatctggttcacttggctcttctccctt 22797607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 72 - 169
Target Start/End: Complemental strand, 18315168 - 18315072
Alignment:
Q  72 caaaatcagaattcataacatatacaattgcagtaaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctct 169  Q
    ||||||||||||| | ||  ||||| | || || |||||||||||||||||||||||||||||||||| |||| | |||||||||||| |||||||||    
T  18315168 caaaatcagaattaaaaatctatactactgaagcaaacctcacccttaccttaattcagatgaacaatctcta-acaaaatctggttcacttggctct 18315072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 124
Target Start/End: Original strand, 22907886 - 22907939
Alignment:
Q  71 tcaaaatcagaattcataacatatacaattgcagtaaacctcacccttacctta 124  Q
    |||||||||||||||| ||| ||||||||||| |||||||||||||||||||||    
T  22907886 tcaaaatcagaattcagaacctatacaattgcggtaaacctcacccttacctta 22907939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 72 - 124
Target Start/End: Complemental strand, 933704 - 933652
Alignment:
Q  72 caaaatcagaattcataacatatacaattgcagtaaacctcacccttacctta 124  Q
    ||||||||||||||| ||| ||||||||||| |||||||||||||||||||||    
T  933704 caaaatcagaattcagaacctatacaattgcggtaaacctcacccttacctta 933652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 72 - 124
Target Start/End: Original strand, 19727588 - 19727640
Alignment:
Q  72 caaaatcagaattcataacatatacaattgcagtaaacctcacccttacctta 124  Q
    ||||||||||||||| ||| ||||||||||| |||||||||||||||||||||    
T  19727588 caaaatcagaattcagaacctatacaattgcggtaaacctcacccttacctta 19727640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 8767171 - 8767115
Alignment:
Q  161 cttggctcttctcccttgctcttggtttt-tctcccaaaacttgttttacgtgaaac 216  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||| |||| ||||    
T  8767171 cttggctcttctcccttgttcttggttttctctcccaaaacttgtttcacgtaaaac 8767115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 279
Target Start/End: Original strand, 12943233 - 12943346
Alignment:
Q  170 tctcccttgctcttggtttttctc--ccaaaacttgttttacgtgaaactgcttctgactttctatttttcctaactcccaatat-taactc--ccttta 264  Q
    |||||||||  |||||||||||||  |||||||||||||||||| ||||||||||| || || |  |||||||||||||||| || ||||||  ||||||    
T  12943233 tctcccttgtccttggtttttctctcccaaaacttgttttacgtaaaactgcttctaacctt-ttcttttcctaactcccaaaatataactcctccttta 12943331  T
Q  265 tttcacttaactccc 279  Q
    ||||| | |||||||    
T  12943332 tttcattaaactccc 12943346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 72 - 124
Target Start/End: Complemental strand, 21723953 - 21723901
Alignment:
Q  72 caaaatcagaattcataacatatacaattgcagtaaacctcacccttacctta 124  Q
    |||||| |||||||| ||| ||||||||||| |||||||||||||||||||||    
T  21723953 caaaattagaattcagaacctatacaattgcggtaaacctcacccttacctta 21723901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 72 - 124
Target Start/End: Complemental strand, 33681449 - 33681397
Alignment:
Q  72 caaaatcagaattcataacatatacaattgcagtaaacctcacccttacctta 124  Q
    ||||||||||||||| ||| |||| |||||| |||||||||||||||||||||    
T  33681449 caaaatcagaattcagaacctatagaattgcggtaaacctcacccttacctta 33681397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 103 - 138
Target Start/End: Original strand, 7430624 - 7430659
Alignment:
Q  103 agtaaacctcacccttaccttaattcagatgaacaa 138  Q
    ||||||||||||||||||||||||||||||||||||    
T  7430624 agtaaacctcacccttaccttaattcagatgaacaa 7430659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 161 - 264
Target Start/End: Original strand, 22347586 - 22347688
Alignment:
Q  161 cttggctcttctcccttgctcttggtttttctcccaaaacttgttttacgtgaaactgcttctgactttctatttttcctaactcccaatattaactccc 260  Q
    |||||||||||||||||| |||||||||||||||||||  |  || ||||||| || | ||||||| ||||   |||||||||||| ||  |||||||||    
T  22347586 cttggctcttctcccttgttcttggtttttctcccaaacttcattgtacgtgagaccgtttctgac-ttctccctttcctaactcctaaacttaactccc 22347684  T
Q  261 ttta 264  Q
    ||||    
T  22347685 ttta 22347688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 211
Target Start/End: Original strand, 1454 - 1503
Alignment:
Q  161 cttggctcttctcccttgctcttggtttttctcccaaaacttgttttacgt 211  Q
    |||||||||||||||||| |||||||||||||||| ||||||||| |||||    
T  1454 cttggctcttctcccttgttcttggtttttctccc-aaacttgttgtacgt 1503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 211
Target Start/End: Original strand, 8413 - 8462
Alignment:
Q  161 cttggctcttctcccttgctcttggtttttctcccaaaacttgttttacgt 211  Q
    |||||||||||||||||| |||||||||||||||| ||||||||| |||||    
T  8413 cttggctcttctcccttgttcttggtttttctccc-aaacttgttgtacgt 8462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 249
Target Start/End: Complemental strand, 2286703 - 2286635
Alignment:
Q  181 cttggtttt-tctcccaaaacttgttttacgtgaaactgcttctgactttctatttttcctaactcccaa 249  Q
    ||||||||| ||||||||||||||||| |||| |||||||||||||| || |  ||||||||||||||||    
T  2286703 cttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacctt-ttcttttcctaactcccaa 2286635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 124
Target Start/End: Original strand, 2709331 - 2709384
Alignment:
Q  71 tcaaaatcagaattcataacatatacaattgcagtaaacctcacccttacctta 124  Q
    |||||||||||||||| ||   ||||||||| ||||||||||||||||||||||    
T  2709331 tcaaaatcagaattcagaattaatacaattgaagtaaacctcacccttacctta 2709384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 103 - 203
Target Start/End: Original strand, 18787090 - 18787189
Alignment:
Q  103 agtaaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctcttctcccttgctcttggtttt-tctcccaaaact 201  Q
    ||||||||||||||||||||||||||||| | | || | | ||| | |||  | |||||||||||||||||||||| |||||||||| ||||||||| ||    
T  18787090 agtaaacctcacccttaccttaattcagaaggaaaaatgc-aca-acaattggattctcttggctcttctcccttgttcttggttttctctcccaaagct 18787187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 124
Target Start/End: Original strand, 19819850 - 19819903
Alignment:
Q  71 tcaaaatcagaattcataacatatacaattgcagtaaacctcacccttacctta 124  Q
    |||||||||||||||| ||  || ||||||| ||||||||||||||||||||||    
T  19819850 tcaaaatcagaattcagaatctacacaattgaagtaaacctcacccttacctta 19819903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 246
Target Start/End: Original strand, 23058051 - 23058128
Alignment:
Q  170 tctcccttgctcttggtttt-tctcccaaaacttgttttacgtgaaactgcttctgactttctatttttcctaactcc 246  Q
    ||||||||| |||||||||| ||||||||||||||||| || | ||||||||| |||| || | |||||||| |||||    
T  23058051 tctcccttgttcttggttttctctcccaaaacttgtttcacataaaactgcttgtgaccttttctttttcctcactcc 23058128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 279
Target Start/End: Original strand, 25397292 - 25397394
Alignment:
Q  180 tcttggtttt-tctcccaaaacttgttttacgtgaaactgcttctgactttctatttttcctaactccc---aatattaactccctttatttcacttaac 275  Q
    |||||||||| ||||||||||||||||| |||| ||||||||||| || || | |||||||||||||||   ||||| |  ||||||||||||| | |||    
T  25397292 tcttggttttctctcccaaaacttgtttcacgtaaaactgcttctaacctt-tctttttcctaactccccaaaatataacttccctttatttcattaaac 25397390  T
Q  276 tccc 279  Q
    ||||    
T  25397391 tccc 25397394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 72 - 124
Target Start/End: Original strand, 1593711 - 1593763
Alignment:
Q  72 caaaatcagaattcataacatatacaattgcagtaaacctcacccttacctta 124  Q
    |||||| |||||||| ||  ||||||||||| |||||||||||||||||||||    
T  1593711 caaaattagaattcagaatctatacaattgcggtaaacctcacccttacctta 1593763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 14615396 - 14615340
Alignment:
Q  161 cttggctcttctcccttgctcttggtttt-tctcccaaaacttgttttacgtgaaac 216  Q
    |||| ||||||||||||| |||||||||| ||||||||||||||||| |||| ||||    
T  14615396 cttgactcttctcccttgttcttggttttctctcccaaaacttgtttcacgtaaaac 14615340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 19401016 - 19401052
Alignment:
Q  1 tattaaatcaaccaattacaacttataaacctaattc 37  Q
    ||||||||||| |||||||||||||||||||||||||    
T  19401016 tattaaatcaaacaattacaacttataaacctaattc 19401052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 279
Target Start/End: Complemental strand, 1589718 - 1589615
Alignment:
Q  179 ctcttggtttttctccc-aaaacttgttttacgtgaaactgcttctgactt-tctatttttcctaactcccaatattaac-tccctttatttcacttaac 275  Q
    ||||||||||||||||| ||||||  || |||||||||||||||| ||||| || |||||| |||||||| ||  ||| | ||||||||||||| | |||    
T  1589718 ctcttggtttttctcccaaaaactgattgtacgtgaaactgcttcagacttctcaattttttctaactcctaaacttagcttccctttatttcattcaac 1589619  T
Q  276 tccc 279  Q
    ||||    
T  1589618 tccc 1589615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 41
Target Start/End: Original strand, 18585728 - 18585767
Alignment:
Q  2 attaaatcaaccaattacaacttataaacctaattcctaa 41  Q
    |||||| |||||||||||||||| ||||||||||||||||    
T  18585728 attaaaacaaccaattacaacttctaaacctaattcctaa 18585767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 138
Target Start/End: Original strand, 22347514 - 22347549
Alignment:
Q  103 agtaaacctcacccttaccttaattcagatgaacaa 138  Q
    ||||||||||||||||||||||||||||| ||||||    
T  22347514 agtaaacctcacccttaccttaattcagacgaacaa 22347549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 138
Target Start/End: Original strand, 29266374 - 29266409
Alignment:
Q  103 agtaaacctcacccttaccttaattcagatgaacaa 138  Q
    ||||||||||||||||||||||||||||| ||||||    
T  29266374 agtaaacctcacccttaccttaattcagacgaacaa 29266409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 279
Target Start/End: Complemental strand, 29483367 - 29483266
Alignment:
Q  181 cttggtttt-tctcccaaaacttgttttacgtgaaactgcttctgactttctatttttcctaactcccaatat-taactc--cctttatttcacttaact 276  Q
    ||||||||| ||||||||||||||||| |||| ||||||||||| || || |  |||||||||||||||| || ||||||  ||||||||||| | ||||    
T  29483367 cttggttttctctcccaaaacttgtttcacgtaaaactgcttctaacctt-ttcttttcctaactcccaaaatataactcctcctttatttcattaaact 29483269  T
Q  277 ccc 279  Q
    |||    
T  29483268 ccc 29483266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 159 - 215
Target Start/End: Complemental strand, 16132386 - 16132326
Alignment:
Q  159 ctcttggctcttctcc---cttgctcttggtttttctcccaaaacttg-ttttacgtgaaa 215  Q
    ||||||||||||||||   ||| ||||||||||||||||||||| ||| ||||||||||||    
T  16132386 ctcttggctcttctcctagctttctcttggtttttctcccaaaaattgtttttacgtgaaa 16132326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 226
Target Start/End: Complemental strand, 933612 - 933551
Alignment:
Q  166 ctcttctcccttgctcttggtttttctc-ccaaaacttgttttacgtgaaactgcttctgac 226  Q
    |||||||  |||| ||||| |||| ||| |||||||||||||||||| ||||||||||||||    
T  933612 ctcttctttcttgttcttgcttttcctctccaaaacttgttttacgtaaaactgcttctgac 933551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 279
Target Start/End: Original strand, 1640051 - 1640174
Alignment:
Q  161 cttggctcttctcc---cttgctcttggtttttctcccaaaacttgttt-tacgtgaaactgcttctgactttctatttttcctaactcccaatattaac 256  Q
    ||||||||||||||   ||| |||||| |||||||||||||   | ||| ||||||||||||||| ||||||   | ||||||||||||| ||  |||||    
T  1640051 cttggctcttctcctagctttctcttgatttttctcccaaactctatttgtacgtgaaactgcttatgacttctcaattttcctaactcctaaacttaac 1640150  T
Q  257 t-ccctttatttcacttaactccc 279  Q
    | |||||||||| | |||||||||    
T  1640151 tcccctttattttatttaactccc 1640174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 223
Target Start/End: Complemental strand, 5289093 - 5288980
Alignment:
Q  110 ctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctcttctcccttg---ctcttggtttttctc-ccaaaacttgtt 205  Q
    |||||||||||||||||||||| ||| |||| | ||| ||| |||| ||| |||||||||   ||||||   |||||| |||| ||| ||||||||||||    
T  5289093 ctcacccttaccttaattcagaagaataattccaacagaaa-tctgattcacttggctct---cccttggttctcttgcttttcctctccaaaacttgtt 5288998  T
Q  206 ttacgtgaaactgcttct 223  Q
    ||||||  ||||||||||    
T  5288997 ttacgtacaactgcttct 5288980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 131
Target Start/End: Complemental strand, 10469921 - 10469888
Alignment:
Q  98 attgcagtaaacctcacccttaccttaattcaga 131  Q
    |||| |||||||||||||||||||||||||||||    
T  10469921 attgaagtaaacctcacccttaccttaattcaga 10469888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 131
Target Start/End: Complemental strand, 13127469 - 13127436
Alignment:
Q  98 attgcagtaaacctcacccttaccttaattcaga 131  Q
    |||| |||||||||||||||||||||||||||||    
T  13127469 attgaagtaaacctcacccttaccttaattcaga 13127436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 28948496 - 28948533
Alignment:
Q  1 tattaaatcaaccaattacaacttataaacctaattcc 38  Q
    ||||||| |||||||||||||||| |||||||||||||    
T  28948496 tattaaaacaaccaattacaacttctaaacctaattcc 28948533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 215
Target Start/End: Complemental strand, 31021671 - 31021634
Alignment:
Q  179 ctcttggtttttctcccaaaact-tgttttacgtgaaa 215  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  31021671 ctcttggtttttctcccaaaactctgttttacgtgaaa 31021634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 70; Significance: 3e-31; HSPs: 3)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 106 - 308
Target Start/End: Complemental strand, 17340 - 17138
Alignment:
Q  106 aaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctcttctcccttgctcttggtttttctcccaaaa-ct-tg 203  Q
    |||||||||||||||||||| |||||| |||||| ||||||  || ||||||||||||||||||||||||||| |||| ||||||||||||||| || ||    
T  17340 aaacctcacccttaccttaaatcagataaacaatctctaca--aattctggttctcttggctcttctcccttgttcttagtttttctcccaaaagctatg 17243  T
Q  204 ttttacgtgaaactgcttctgactttctatttttcctaactcccaata-ttaact--ccctttatttcacttaactccctctcaatttctatttattcta 300  Q
    || ||||| |||| | ||||| | ||||  |||||||||||||||| | ||||||  |||||||||||| |||||||||||| || ||||||| ||||||    
T  17242 ttgtacgtaaaacagtttctg-ccttct-cttttcctaactcccaacacttaactccccctttatttcatttaactccctcttaa-ttctattaattcta 17146  T
Q  301 atttaatc 308  Q
    ||| ||||    
T  17145 attaaatc 17138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 72 - 124
Target Start/End: Original strand, 259655 - 259707
Alignment:
Q  72 caaaatcagaattcataacatatacaattgcagtaaacctcacccttacctta 124  Q
    ||||||||||||||| ||| ||||||||||| |||||||||||||||||||||    
T  259655 caaaatcagaattcagaacctatacaattgcggtaaacctcacccttacctta 259707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 72 - 124
Target Start/End: Original strand, 266070 - 266122
Alignment:
Q  72 caaaatcagaattcataacatatacaattgcagtaaacctcacccttacctta 124  Q
    ||||||||||||||| ||| ||||||||||| |||||||||||||||||||||    
T  266070 caaaatcagaattcagaacctatacaattgcggtaaacctcacccttacctta 266122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 70; Significance: 3e-31; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 106 - 308
Target Start/End: Original strand, 14822369 - 14822571
Alignment:
Q  106 aaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctcttctcccttgctcttggtttttctcccaaaa-ct-tg 203  Q
    |||||||||||||||||||| |||||| |||||| ||||||  || ||||||||||||||||||||||||||| |||| ||||||||||||||| || ||    
T  14822369 aaacctcacccttaccttaaatcagataaacaatctctaca--aattctggttctcttggctcttctcccttgttcttagtttttctcccaaaagctatg 14822466  T
Q  204 ttttacgtgaaactgcttctgactttctatttttcctaactcccaata-ttaact--ccctttatttcacttaactccctctcaatttctatttattcta 300  Q
    || ||||| |||| | ||||| | ||||  |||||||||||||||| | ||||||  |||||||||||| |||||||||||| || ||||||| ||||||    
T  14822467 ttgtacgtaaaacagtttctg-ccttct-cttttcctaactcccaacacttaactccccctttatttcatttaactccctcttaa-ttctattaattcta 14822563  T
Q  301 atttaatc 308  Q
    ||| ||||    
T  14822564 attaaatc 14822571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 71 - 124
Target Start/End: Complemental strand, 16999362 - 16999309
Alignment:
Q  71 tcaaaatcagaattcataacatatacaattgcagtaaacctcacccttacctta 124  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  16999362 tcaaaatcagaattcataacctatacaattgcggtaaacctcacccttacctta 16999309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 17177414 - 17177458
Alignment:
Q  157 ttctcttggctcttctcccttgctcttggtttttctcccaaaact 201  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  17177414 ttctcttggctcttctcccttgctcttggtttttctcccaaaact 17177458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 72 - 177
Target Start/End: Complemental strand, 10783483 - 10783379
Alignment:
Q  72 caaaatcagaattca-taacatatacaattgcagtaaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctctt 170  Q
    ||||||||||||||| |||| ||||| | || || ||||||||||||||||||||||||||||||||| | | |||  || |||||||| ||||||||||    
T  10783483 caaaatcagaattcaataac-tatactactgaagcaaacctcacccttaccttaattcagatgaacaaatgc-acaacaattctggttcacttggctctt 10783386  T
Q  171 ctccctt 177  Q
    |||||||    
T  10783385 ctccctt 10783379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 106 - 207
Target Start/End: Complemental strand, 16228285 - 16228185
Alignment:
Q  106 aaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctcttctcccttgctcttggtttt-tctcccaaaacttgt 204  Q
    |||||||||||||||||||| |||||||||||| | | ||| | |||| | |||||||||||||||||||||| |||||||||| ||||| ||| |||||    
T  16228285 aaacctcacccttaccttaaatcagatgaacaaatgc-aca-acaatcggattctcttggctcttctcccttgttcttggttttctctcctaaagcttgt 16228188  T
Q  205 ttt 207  Q
    |||    
T  16228187 ttt 16228185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 124
Target Start/End: Original strand, 14487570 - 14487623
Alignment:
Q  71 tcaaaatcagaattcataacatatacaattgcagtaaacctcacccttacctta 124  Q
    |||||||||||||||| ||| ||||||||||| |||||||||||||||||||||    
T  14487570 tcaaaatcagaattcagaacctatacaattgcggtaaacctcacccttacctta 14487623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 161 - 279
Target Start/End: Original strand, 18230833 - 18230956
Alignment:
Q  161 cttggctcttctcc---cttgctcttggtttttctcccaaaacttgttt-tacgtgaaactgcttctgactttctatttttcctaactcccaatattaac 256  Q
    ||||||||||||||   ||| ||||||||||||||||||||   ||||| ||||||||||||||||||||||   | ||||||||||||| ||  |||||    
T  18230833 cttggctcttctcctagctttctcttggtttttctcccaaactctgtttgtacgtgaaactgcttctgacttctcaattttcctaactcctaaacttaac 18230932  T
Q  257 t-ccctttatttcacttaactccc 279  Q
    | |||||||||| | |||||||||    
T  18230933 tcccctttattttatttaactccc 18230956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 72 - 124
Target Start/End: Original strand, 14507177 - 14507229
Alignment:
Q  72 caaaatcagaattcataacatatacaattgcagtaaacctcacccttacctta 124  Q
    |||||| |||||||||||| ||||||||||| |||||||||||||||||||||    
T  14507177 caaaattagaattcataacctatacaattgcggtaaacctcacccttacctta 14507229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 72 - 124
Target Start/End: Complemental strand, 23723994 - 23723942
Alignment:
Q  72 caaaatcagaattcataacatatacaattgcagtaaacctcacccttacctta 124  Q
    ||||||||||||||| ||| ||||||||||| |||||||||||||||||||||    
T  23723994 caaaatcagaattcagaacctatacaattgcggtaaacctcacccttacctta 23723942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 72 - 124
Target Start/End: Complemental strand, 43284097 - 43284045
Alignment:
Q  72 caaaatcagaattcataacatatacaattgcagtaaacctcacccttacctta 124  Q
    ||||||||||||| | ||| |||||||||||||||||||||||||||||||||    
T  43284097 caaaatcagaatttagaacctatacaattgcagtaaacctcacccttacctta 43284045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 72 - 177
Target Start/End: Complemental strand, 10972134 - 10972030
Alignment:
Q  72 caaaatcagaattca-taacatatacaattgcagtaaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctctt 170  Q
    ||||||||||||||| |||| ||||| | || || ||||||||||||||||||||||||||||||||| | | |||  || ||||||||  |||||||||    
T  10972134 caaaatcagaattcaataac-tatactactgaagcaaacctcacccttaccttaattcagatgaacaaatgc-acaacaattctggttcaattggctctt 10972037  T
Q  171 ctccctt 177  Q
    |||||||    
T  10972036 ctccctt 10972030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 124
Target Start/End: Original strand, 40909384 - 40909434
Alignment:
Q  74 aaatcagaattcataacatatacaattgcagtaaacctcacccttacctta 124  Q
    ||||||||||||| ||| ||||||||||| |||||||||||||||||||||    
T  40909384 aaatcagaattcagaacctatacaattgcggtaaacctcacccttacctta 40909434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 164 - 249
Target Start/End: Complemental strand, 43284007 - 43283921
Alignment:
Q  164 ggctcttctcccttgctcttggtttttctc-ccaaaacttgttttacgtgaaactgcttctgactttctatttttcctaactcccaa 249  Q
    ||||||||||||||| ||||| |||| ||| |||||||||||||||||| |||||| |||||||  | |  ||||||||||||||||    
T  43284007 ggctcttctcccttgttcttgtttttcctctccaaaacttgttttacgtaaaactgattctgacccttttcttttcctaactcccaa 43283921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 177
Target Start/End: Original strand, 8834936 - 8835002
Alignment:
Q  109 cctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctcttctccctt 177  Q
    ||||||||||||||||||||| |||||||||| | ||| ||||||| |||| |||||||||||||||||    
T  8834936 cctcacccttaccttaattcaaatgaacaattgc-aca-aaaatcttgttcacttggctcttctccctt 8835002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 161 - 211
Target Start/End: Original strand, 14063781 - 14063832
Alignment:
Q  161 cttggctcttctcccttgctcttggtttt-tctcccaaaacttgttttacgt 211  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||| ||||    
T  14063781 cttggctcttctcccttgttcttggttttctctcccaaaacttgtttcacgt 14063832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 106 - 169
Target Start/End: Complemental strand, 14991790 - 14991729
Alignment:
Q  106 aaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctct 169  Q
    |||||||||||||||||||| |||||||||||||| | ||| |||||||||||| |||||||||    
T  14991790 aaacctcacccttaccttaaatcagatgaacaattgc-aca-aaaatctggttcacttggctct 14991729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 106 - 169
Target Start/End: Complemental strand, 15004298 - 15004237
Alignment:
Q  106 aaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctct 169  Q
    |||||||||||||||||||| |||||||||||||| | ||| |||||||||||| |||||||||    
T  15004298 aaacctcacccttaccttaaatcagatgaacaattgc-aca-aaaatctggttcacttggctct 15004237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 249
Target Start/End: Original strand, 16157906 - 16157975
Alignment:
Q  180 tcttggtttt-tctcccaaaacttgttttacgtgaaactgcttctgactttctatttttcctaactcccaa 249  Q
    |||||||||| ||||||||||||||||| |||| |||||||||||||| || |  ||||||||||||||||    
T  16157906 tcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacatt-ttcttttcctaactcccaa 16157975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 159 - 223
Target Start/End: Complemental strand, 20898712 - 20898644
Alignment:
Q  159 ctcttggctcttctcc---cttgctcttggtttttctcccaaaacttgtttt-acgtgaaactgcttct 223  Q
    ||||||||||||||||   ||| |||||||||||||||||||||  |||||| ||||||||||||||||    
T  20898712 ctcttggctcttctcctagctttctcttggtttttctcccaaaaactgttttcacgtgaaactgcttct 20898644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 169
Target Start/End: Original strand, 30240038 - 30240102
Alignment:
Q  103 agtaaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctct 169  Q
    ||||||||||| |||||||||||||||||||||||| | | ||| |||||||||||| |||||||||    
T  30240038 agtaaacctcatccttaccttaattcagatgaacaaatgc-aca-aaaatctggttcacttggctct 30240102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 249
Target Start/End: Original strand, 2757449 - 2757517
Alignment:
Q  181 cttggtttt-tctcccaaaacttgttttacgtgaaactgcttctgactttctatttttcctaactcccaa 249  Q
    ||||||||| ||||||||||||||||| |||| |||||||||||||| || |  ||||||||||||||||    
T  2757449 cttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacctt-ttcttttcctaactcccaa 2757517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 124
Target Start/End: Complemental strand, 11170442 - 11170389
Alignment:
Q  71 tcaaaatcagaattcataacatatacaattgcagtaaacctcacccttacctta 124  Q
    |||||||||||||| | ||  ||||||||||| |||||||||||||||||||||    
T  11170442 tcaaaatcagaatttagaatctatacaattgcggtaaacctcacccttacctta 11170389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 201
Target Start/End: Complemental strand, 13898812 - 13898771
Alignment:
Q  160 tcttggctcttctcccttgctcttggtttttctcccaaaact 201  Q
    ||||||||||||||||||| || |||||||||||||||||||    
T  13898812 tcttggctcttctcccttgttcctggtttttctcccaaaact 13898771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 124
Target Start/End: Complemental strand, 41528287 - 41528234
Alignment:
Q  71 tcaaaatcagaattcataacatatacaattgcagtaaacctcacccttacctta 124  Q
    |||||||||||||||| ||   ||||||||| ||||||||||||||||||||||    
T  41528287 tcaaaatcagaattcagaatcaatacaattgaagtaaacctcacccttacctta 41528234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 72 - 124
Target Start/End: Original strand, 16445907 - 16445959
Alignment:
Q  72 caaaatcagaattcataacatatacaattgcagtaaacctcacccttacctta 124  Q
    ||||||||||||||| ||| ||||  ||||| |||||||||||||||||||||    
T  16445907 caaaatcagaattcagaacctataagattgcggtaaacctcacccttacctta 16445959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 72 - 124
Target Start/End: Original strand, 20941242 - 20941294
Alignment:
Q  72 caaaatcagaattcataacatatacaattgcagtaaacctcacccttacctta 124  Q
    ||||||||||||||| ||| ||||  ||||| |||||||||||||||||||||    
T  20941242 caaaatcagaattcagaacctataagattgcggtaaacctcacccttacctta 20941294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 72 - 124
Target Start/End: Original strand, 23122582 - 23122634
Alignment:
Q  72 caaaatcagaattcataacatatacaattgcagtaaacctcacccttacctta 124  Q
    ||||||||||||||| ||  |||| |||||| |||||||||||||||||||||    
T  23122582 caaaatcagaattcagaatctatataattgcggtaaacctcacccttacctta 23122634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 38
Target Start/End: Original strand, 9638933 - 9638968
Alignment:
Q  3 ttaaatcaaccaattacaacttataaacctaattcc 38  Q
    |||||||||||||||||||||| |||||||||||||    
T  9638933 ttaaatcaaccaattacaacttctaaacctaattcc 9638968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 15239766 - 15239715
Alignment:
Q  179 ctcttggtttttctcccaaaact-tgttt-tacgtgaaactgcttctgactt 228  Q
    |||||| |||||||||||||||| ||||| ||||||||||||||||||||||    
T  15239766 ctcttgatttttctcccaaaactctgtttgtacgtgaaactgcttctgactt 15239715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 15447326 - 15447275
Alignment:
Q  179 ctcttggtttttctcccaaaact-tgttttacgtg-aaactgcttctgactt 228  Q
    ||||||||||||||||||||||| |||| |||||| ||||||||||||||||    
T  15447326 ctcttggtttttctcccaaaactctgttgtacgtgaaaactgcttctgactt 15447275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 279
Target Start/End: Original strand, 15535235 - 15535336
Alignment:
Q  181 cttggtttt-tctcccaaaacttgttttacgtgaaactgcttctgactttctatttttcctaactcccaatat-taactc--cctttatttcacttaact 276  Q
    ||||||||| ||||||||||||||||| |||| ||||||||||| || || |  |||||||||||||||| || ||||||  ||||||||||| | ||||    
T  15535235 cttggttttctctcccaaaacttgtttcacgtaaaactgcttctaacctt-ttcttttcctaactcccaaaatataactcctcctttatttcattaaact 15535333  T
Q  277 ccc 279  Q
    |||    
T  15535334 ccc 15535336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 279
Target Start/End: Complemental strand, 16370672 - 16370570
Alignment:
Q  179 ctcttggtttttctcccaaaacttg-ttttacgtg-aaactgcttctgactttctatttttcctaactcccaatattaactccc-tttatttcacttaac 275  Q
    ||||||||||||| ||||||||||| ||||||||| ||||||||| |||| ||||   |||||||||||| ||  ||||||||| ||||||| | |||||    
T  16370672 ctcttggtttttcgcccaaaacttgtttttacgtgaaaactgcttatgac-ttctcactttcctaactcctaaacttaactcccttttattttatttaac 16370574  T
Q  276 tccc 279  Q
    ||||    
T  16370573 tccc 16370570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 204
Target Start/End: Original strand, 20941332 - 20941371
Alignment:
Q  165 gctcttctcccttgctcttggtttttctcccaaaacttgt 204  Q
    |||| |||||||||||||||| ||||||||||||||||||    
T  20941332 gctcctctcccttgctcttggcttttctcccaaaacttgt 20941371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 28919778 - 28919829
Alignment:
Q  179 ctcttggtttttctcccaaaact-tgttttacgtg-aaactgcttctgactt 228  Q
    ||||||||||||||||||||||| |||| |||||| ||||||||||||||||    
T  28919778 ctcttggtttttctcccaaaactctgttgtacgtgaaaactgcttctgactt 28919829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 33661543 - 33661492
Alignment:
Q  179 ctcttggtttttctcccaaaact-tgttttacgtg-aaactgcttctgactt 228  Q
    ||||||||||||||||||||||| |||| |||||| ||||||||||||||||    
T  33661543 ctcttggtttttctcccaaaactctgttgtacgtgaaaactgcttctgactt 33661492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 279
Target Start/End: Complemental strand, 49546883 - 49546782
Alignment:
Q  181 cttggtttt-tctcccaaaacttgttttacgtgaaactgcttctgactttctatttttcctaactcccaatat-taactc--cctttatttcacttaact 276  Q
    ||||||||| ||||||||||||||||| |||| ||||||||||| || || |  |||||||||||||||| || ||||||  ||||||||||| | ||||    
T  49546883 cttggttttctctcccaaaacttgtttcacgtaaaactgcttctaacatt-ttcttttcctaactcccaaaatataactcctcctttatttcattaaact 49546785  T
Q  277 ccc 279  Q
    |||    
T  49546784 ccc 49546782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 13878881 - 13878930
Alignment:
Q  179 ctcttggtttttctcccaaaacttgttttacgtg-aaactgcttctgactt 228  Q
    |||||||||||||||||||||| |||| |||||| ||||||||||||||||    
T  13878881 ctcttggtttttctcccaaaac-tgttgtacgtgaaaactgcttctgactt 13878930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 103 - 137
Target Start/End: Complemental strand, 13898882 - 13898848
Alignment:
Q  103 agtaaacctcacccttaccttaattcagatgaaca 137  Q
    |||||||||||| ||||||||||||||||||||||    
T  13898882 agtaaacctcactcttaccttaattcagatgaaca 13898848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 173 - 226
Target Start/End: Original strand, 18213880 - 18213934
Alignment:
Q  173 cccttgctcttggtttt-tctcccaaaacttgttttacgtgaaactgcttctgac 226  Q
    |||||| ||||| |||| ||||||||||||||||| |||| ||||||||||||||    
T  18213880 cccttgttcttgattttctctcccaaaacttgtttcacgtaaaactgcttctgac 18213934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 71 - 129
Target Start/End: Original strand, 49051932 - 49051990
Alignment:
Q  71 tcaaaatcagaattcataacatatacaattgcagtaaacctcacccttaccttaattca 129  Q
    ||||||||||||||||  || ||||| | || |||||| ||||||||||||||||||||    
T  49051932 tcaaaatcagaattcaatacctatactactgaagtaaaactcacccttaccttaattca 49051990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 131
Target Start/End: Original strand, 5939839 - 5939872
Alignment:
Q  98 attgcagtaaacctcacccttaccttaattcaga 131  Q
    |||| |||||||||||||||||||||||||||||    
T  5939839 attgaagtaaacctcacccttaccttaattcaga 5939872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 131
Target Start/End: Original strand, 7360160 - 7360193
Alignment:
Q  98 attgcagtaaacctcacccttaccttaattcaga 131  Q
    |||| |||||||||||||||||||||||||||||    
T  7360160 attgaagtaaacctcacccttaccttaattcaga 7360193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 229
Target Start/End: Original strand, 13882489 - 13882538
Alignment:
Q  182 ttggtttttctcccaaaact-tgttttacgtg-aaactgcttctgacttt 229  Q
    |||||||||||||||||||| |||| |||||| |||||||||||||||||    
T  13882489 ttggtttttctcccaaaactctgttgtacgtgaaaactgcttctgacttt 13882538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 223
Target Start/End: Complemental strand, 16277219 - 16277174
Alignment:
Q  179 ctcttggtttttctcccaaaacttgtttt-acgtgaaactgcttct 223  Q
    |||||||||||||||||||||  |||||| ||||||||||||||||    
T  16277219 ctcttggtttttctcccaaaaactgttttcacgtgaaactgcttct 16277174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 198
Target Start/End: Original strand, 17143339 - 17143376
Alignment:
Q  161 cttggctcttctcccttgctcttggtttttctcccaaa 198  Q
    |||||||||||||||||| ||||||||||| |||||||    
T  17143339 cttggctcttctcccttgttcttggtttttgtcccaaa 17143376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 138
Target Start/End: Complemental strand, 38979970 - 38979941
Alignment:
Q  109 cctcacccttaccttaattcagatgaacaa 138  Q
    ||||||||||||||||||||||||||||||    
T  38979970 cctcacccttaccttaattcagatgaacaa 38979941  T

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Target: scaffold0139 (Bit Score: 68; Significance: 5e-30; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 103 - 308
Target Start/End: Complemental strand, 2083 - 1881
Alignment:
Q  103 agtaaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctcttctcccttgctcttggtttttctcccaaaactt 202  Q
    ||||||||||||||||||||||| | |||||| ||| | ||||| ||  ||| ||||||||||||||| ||||||| |||||||||||||||||||||||    
T  2083 agtaaacctcacccttaccttaaattagatgatcaact-ctacagaat-tcttgttctcttggctcttttcccttgttcttggtttttctcccaaaactt 1986  T
Q  203 gttt-tacgtgaaactgcttctgactttctatttttcctaactcccaatattaact-ccctttatttcacttaactccctctcaatttctatttattcta 300  Q
    |||| ||||| ||||||||||| || || |   |||||||||||| ||  |||||| |||||||||| | |||||||||||| || ||||||| ||||||    
T  1985 gtttgtacgtaaaactgcttcttacctt-tccctttcctaactcctaa-cttaactcccctttattttatttaactccctcttaa-ttctattaattcta 1889  T
Q  301 atttaatc 308  Q
    ||||||||    
T  1888 atttaatc 1881  T

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Target: scaffold0049 (Bit Score: 66; Significance: 8e-29; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 103 - 199
Target Start/End: Complemental strand, 42095 - 42001
Alignment:
Q  103 agtaaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctcttctcccttgctcttggtttttctcccaaaa 199  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||  || | ||||||||||||||||||||||||| ||||||||||||||||||||    
T  42095 agtaaacctcacccttaccttaaatcagatgaacaatctctaca--aattatggttctcttggctcttctcccttgttcttggtttttctcccaaaa 42001  T

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Target: scaffold0049; HSP #2
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 103 - 199
Target Start/End: Complemental strand, 52790 - 52696
Alignment:
Q  103 agtaaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctcttctcccttgctcttggtttttctcccaaaa 199  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||  || | ||||||||||||||||||||||||| ||||||||||||||||||||    
T  52790 agtaaacctcacccttaccttaaatcagatgaacaatctctaca--aattatggttctcttggctcttctcccttgttcttggtttttctcccaaaa 52696  T

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Target: scaffold0042 (Bit Score: 66; Significance: 8e-29; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 158 - 223
Target Start/End: Original strand, 53921 - 53986
Alignment:
Q  158 tctcttggctcttctcccttgctcttggtttttctcccaaaacttgttttacgtgaaactgcttct 223  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53921 tctcttggctcttctcccttgctcttggtttttctcccaaaacttgttttacgtgaaactgcttct 53986  T

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Target: scaffold0042; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 159 - 223
Target Start/End: Original strand, 52294 - 52362
Alignment:
Q  159 ctcttggctcttctcc---cttgctcttggtttttctcccaaaa-cttgttttacgtgaaactgcttct 223  Q
    ||||||||||||||||   ||| || |||||||||||||||||| ||  ||||||||||||||||||||    
T  52294 ctcttggctcttctcctagctttctattggtttttctcccaaaaactatttttacgtgaaactgcttct 52362  T

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Target: scaffold0447 (Bit Score: 55; Significance: 3e-22; HSPs: 2)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 179 - 279
Target Start/End: Original strand, 7951 - 8053
Alignment:
Q  179 ctcttggtttttctcccaaaacttgttt-tacgtgaaactgcttctgactttctatttttcctaactcccaatattaactccc-tttatttcacttaact 276  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||   | ||||||||||||| ||  ||||||||| ||||||| ||||||||    
T  7951 ctcttggtttttctcccaaaacttgtttgtacgtgaaactgcttctgacttctcaattttcctaactcctaaacttaactcccttttattttacttaact 8050  T
Q  277 ccc 279  Q
    |||    
T  8051 ccc 8053  T

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Target: scaffold0447; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 179 - 279
Target Start/End: Original strand, 12565 - 12667
Alignment:
Q  179 ctcttggtttttctcccaaaacttgttt-tacgtgaaactgcttctgactttctatttttcctaactcccaatattaactccc-tttatttcacttaact 276  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||   | ||||||||||||| ||  ||||||||| ||||||| ||||||||    
T  12565 ctcttggtttttctcccaaaacttgtttgtacgtgaaactgcttctgacttctcaattttcctaactcctaaacttaactcccttttattttacttaact 12664  T
Q  277 ccc 279  Q
    |||    
T  12665 ccc 12667  T

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Target: scaffold0383 (Bit Score: 55; Significance: 3e-22; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 179 - 279
Target Start/End: Original strand, 10560 - 10662
Alignment:
Q  179 ctcttggtttttctcccaaaacttgttt-tacgtgaaactgcttctgactttctatttttcctaactcccaatattaactccc-tttatttcacttaact 276  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||   | ||||||||||||| ||  ||||||||| ||||||| ||||||||    
T  10560 ctcttggtttttctcccaaaacttgtttgtacgtgaaactgcttctgacttctcaattttcctaactcctaaacttaactcccttttattttacttaact 10659  T
Q  277 ccc 279  Q
    |||    
T  10660 ccc 10662  T

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Target: scaffold0201 (Bit Score: 53; Significance: 5e-21; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 103 - 308
Target Start/End: Original strand, 27313 - 27520
Alignment:
Q  103 agtaaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctcttctcccttgctcttgg----tttttctcccaaa 198  Q
    ||||||||||||||| ||||||||| ||||| | ||| |||||| ||  |||||||||||||||||| ||   | ||||||      |||||||||||||    
T  27313 agtaaacctcaccctcaccttaatttagatggaaaatctctacagaa--tctggttctcttggctctact---tggctcttctcccttttttctcccaaa 27407  T
Q  199 a-ct-tgttt-tacgtgaaactgcttctgactttctatttttcctaactcccaata-ttaact-ccctttatttcacttaactccctctcaatttctatt 293  Q
    | || ||||| ||||||||||||||||||||| |||  |||||||||||||||||| |||||| |||||||||||| |||||||||||| || |||||||    
T  27408 agctctgtttgtacgtgaaactgcttctgactatct-cttttcctaactcccaatacttaactcccctttatttcatttaactccctcttaa-ttctatt 27505  T
Q  294 tattctaatttaatc 308  Q
     ||||||||| ||||    
T  27506 aattctaattaaatc 27520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 50; Significance: 3e-19; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 162 - 293
Target Start/End: Complemental strand, 1158 - 1023
Alignment:
Q  162 ttggctcttctcccttgctcttggtttttctcccaaaacttgttttacgtgaaactgct---tctgactttctatttttcctaactcccaata-ttaact 257  Q
    ||||||||||||||||| ||||||||||||||||||||||  || |||||||||| | |   ||||||| || ||||||| |||||||||| | ||||||    
T  1158 ttggctcttctcccttgttcttggtttttctcccaaaactgattgtacgtgaaacagttttctctgactctccatttttcttaactcccaaaacttaact 1059  T
Q  258 ccctttatttcacttaactccctctcaatttctatt 293  Q
    ||||||| ||   ||||||||| || ||||||||||    
T  1058 ccctttaatttctttaactcccacttaatttctatt 1023  T

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Target: scaffold0057; HSP #2
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 103 - 138
Target Start/End: Complemental strand, 1230 - 1195
Alignment:
Q  103 agtaaacctcacccttaccttaattcagatgaacaa 138  Q
    ||||||||||||||||||||||||||||||||||||    
T  1230 agtaaacctcacccttaccttaattcagatgaacaa 1195  T

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Target: scaffold0555 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 103 - 177
Target Start/End: Original strand, 2392 - 2464
Alignment:
Q  103 agtaaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctcttctccctt 177  Q
    ||||||| |||||||||||||||||||||||||||||| | ||| |||||||||||| |||||||||||||||||    
T  2392 agtaaacatcacccttaccttaattcagatgaacaattgc-aca-aaaatctggttcacttggctcttctccctt 2464  T

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Target: scaffold0173 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 103 - 201
Target Start/End: Original strand, 2298 - 2394
Alignment:
Q  103 agtaaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctcttctcccttgctcttggtttttctcccaaaact 201  Q
    ||||||| ||||||||||||||||||||| | |||| | | ||| |  ||| | |||||||||||||||||||||||||||||||||||||||||||||    
T  2298 agtaaacatcacccttaccttaattcagaaggacaaatgc-aca-acgatcggattctcttggctcttctcccttgctcttggtttttctcccaaaact 2394  T

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Target: scaffold0053 (Bit Score: 47; Significance: 2e-17; HSPs: 3)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 103 - 169
Target Start/End: Complemental strand, 72068 - 72004
Alignment:
Q  103 agtaaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctct 169  Q
    |||||||||||||||||||||||||||||||||||| || |||| ||||||||||||||||||||||    
T  72068 agtaaacctcacccttaccttaattcagatgaacaa-ttataca-aaaatctggttctcttggctct 72004  T

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Target: scaffold0053; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 169
Target Start/End: Complemental strand, 45897 - 45833
Alignment:
Q  103 agtaaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctct 169  Q
    ||||||||| ||||||||||||||||| |||||||| ||||| | |||||||||||||| |||||||    
T  45897 agtaaaccttacccttaccttaattcaaatgaacaa-ttctata-aaaatctggttctcctggctct 45833  T

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Target: scaffold0053; HSP #3
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 170 - 223
Target Start/End: Complemental strand, 79038 - 78984
Alignment:
Q  170 tctcccttgctcttggtttt-tctcccaaaacttgttttacgtgaaactgcttct 223  Q
    ||||||||| |||| ||||| ||||||||||||||||| |||| |||||||||||    
T  79038 tctcccttgttctttgttttctctcccaaaacttgtttcacgtaaaactgcttct 78984  T

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Target: scaffold0297 (Bit Score: 46; Significance: 7e-17; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 103 - 308
Target Start/End: Complemental strand, 933 - 739
Alignment:
Q  103 agtaaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctcttctcccttgctcttggtttttctcccaaaactt 202  Q
    ||||||| ||||||||||||||||||| | ||||||  |||||| ||  |||||||||||||||||||||||||||          ||||||||||||||    
T  933 agtaaacatcacccttaccttaattcaaacgaacaaactctacagaat-tctggttctcttggctcttctcccttg----------ttctcccaaaactt 845  T
Q  203 g-ttttacgt-gaaactgcttctgactttctatttttcctaactcccaatattaactccc-tttatttcacttaactccctctcaatttctatttattct 299  Q
    | || |||||  |||| || |||||| ||||   |||||||||||||||  ||||||||| ||||||||| |||||||||||| || ||||||| |||||    
T  844 gattgtacgtaaaaacagc-tctgac-ttctccctttcctaactcccaaacttaactcccttttatttcatttaactccctcttaa-ttctattaattct 748  T

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Target: scaffold0513 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0513
Description:

Target: scaffold0513; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 109 - 177
Target Start/End: Original strand, 8612 - 8678
Alignment:
Q  109 cctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctcttctccctt 177  Q
    ||||||||||||||||||||| |||||||| ||||||| | ||||||||||||||||||||||||||||    
T  8612 cctcacccttaccttaattcatatgaacaa-ttctaca-agaatctggttctcttggctcttctccctt 8678  T

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Target: scaffold0348 (Bit Score: 45; Significance: 3e-16; HSPs: 2)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 72 - 124
Target Start/End: Complemental strand, 3960 - 3908
Alignment:
Q  72 caaaatcagaattcataacatatacaattgcagtaaacctcacccttacctta 124  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  3960 caaaatcagaattcagaacatatacaattgcggtaaacctcacccttacctta 3908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 72 - 124
Target Start/End: Complemental strand, 14706 - 14654
Alignment:
Q  72 caaaatcagaattcataacatatacaattgcagtaaacctcacccttacctta 124  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  14706 caaaatcagaattcagaacctatacaattgcagtaaacctcacccttacctta 14654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239 (Bit Score: 45; Significance: 3e-16; HSPs: 2)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 72 - 124
Target Start/End: Complemental strand, 13691 - 13639
Alignment:
Q  72 caaaatcagaattcataacatatacaattgcagtaaacctcacccttacctta 124  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  13691 caaaatcagaattcagaacctatacaattgcagtaaacctcacccttacctta 13639  T

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Target: scaffold0239; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 72 - 124
Target Start/End: Complemental strand, 6408 - 6356
Alignment:
Q  72 caaaatcagaattcataacatatacaattgcagtaaacctcacccttacctta 124  Q
    |||||| |||||||| ||| ||||||||||| |||||||||||||||||||||    
T  6408 caaaattagaattcagaacctatacaattgcggtaaacctcacccttacctta 6356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 45; Significance: 3e-16; HSPs: 4)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 103 - 163
Target Start/End: Complemental strand, 91761 - 91701
Alignment:
Q  103 agtaaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctctt 163  Q
    ||||||||||||||||||||||||| ||||||||||| |||||| ||||||| ||||||||    
T  91761 agtaaacctcacccttaccttaatttagatgaacaatctctacacaaaatctagttctctt 91701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 235 - 308
Target Start/End: Original strand, 2222 - 2297
Alignment:
Q  235 tttcctaactcccaa--tattaactcccttt-atttcacttaactccctctcaatttctatttattctaatttaatc 308  Q
    |||||||||||||||  |||||||||||||| ||||||||||||||||||| || ||||||| ||||||||| ||||    
T  2222 tttcctaactcccaaaatattaactcccttttatttcacttaactccctct-aaattctattaattctaattaaatc 2297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 173 - 249
Target Start/End: Complemental strand, 45978 - 45902
Alignment:
Q  173 cccttgctcttggtttt-tctcccaaaacttgttttacgtgaaactgcttctgactttctatttttcctaactcccaa 249  Q
    |||||| |||||||||| ||||||||||||||||| |||| |||||||||||||| || |  ||||||||||||||||    
T  45978 cccttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacctt-ttcttttcctaactcccaa 45902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 173 - 249
Target Start/End: Complemental strand, 51382 - 51306
Alignment:
Q  173 cccttgctcttggtttt-tctcccaaaacttgttttacgtgaaactgcttctgactttctatttttcctaactcccaa 249  Q
    |||||| |||||||||| ||||||||||||||||| |||| |||||||||||||| || |  ||||||||||||||||    
T  51382 cccttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacctt-ttcttttcctaactcccaa 51306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 106 - 279
Target Start/End: Complemental strand, 4548 - 4374
Alignment:
Q  106 aaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctcttctcccttgctcttggtttttctcccaaaact---- 201  Q
    ||||||||||||||||||||||||||||||||| | |   | |||||||||||| ||||||||| ||    |  |||   ||||||||||||||||        
T  4548 aaacctcacccttaccttaattcagatgaacaaatgc---acaaaatctggttcacttggctctacttggctcttctccatttttctcccaaaacttgtc 4452  T
Q  202 tgttttacgtgaaactgc-ttctgactttctatttttcctaactcccaata-ttaact-ccctttatttcacttaactccc 279  Q
    |||| ||||||||||||| |||||||||||   ||||||||||||||||||  ||||| |||||||||||| |||||||||    
T  4451 tgttgtacgtgaaactgctttctgactttc---ttttcctaactcccaatacataactcccctttatttcatttaactccc 4374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 106 - 279
Target Start/End: Complemental strand, 19730 - 19556
Alignment:
Q  106 aaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctcttctcccttgctcttggtttttctcccaaaact---- 201  Q
    ||||||||||||||||||||||||||||||||| | |   | |||||||||||| ||||||||| ||    |  |||   ||||||||||||||||        
T  19730 aaacctcacccttaccttaattcagatgaacaaatgc---acaaaatctggttcacttggctctacttggctcttctccatttttctcccaaaacttgtc 19634  T
Q  202 tgttttacgtgaaactgc-ttctgactttctatttttcctaactcccaata-ttaact-ccctttatttcacttaactccc 279  Q
    |||| ||||||||||||| |||||||||||   ||||||||||||||||||  ||||| |||||||||||| |||||||||    
T  19633 tgttgtacgtgaaactgctttctgactttc---ttttcctaactcccaatacataactcccctttatttcatttaactccc 19556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 72 - 159
Target Start/End: Original strand, 46489 - 46573
Alignment:
Q  72 caaaatcagaattcataacatatacaattgcagtaaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttc 159  Q
    ||||||||||||| ||| | ||||| | || |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  46489 caaaatcagaattaatatc-tatactactgaagtaaacctcacccttaccttaattcagatgaacaatttc-aca-aaaatctggttc 46573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 2)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 103 - 169
Target Start/End: Original strand, 14618 - 14682
Alignment:
Q  103 agtaaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctct 169  Q
    |||||||||||||||||||||||||||||||||||| ||||||| | |||||||||| |||||||||    
T  14618 agtaaacctcacccttaccttaattcagatgaacaa-ttctaca-agaatctggttcccttggctct 14682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 72 - 169
Target Start/End: Original strand, 778 - 873
Alignment:
Q  72 caaaatcagaattcataacatatacaattgcagtaaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctct 169  Q
    ||||||||||||| | ||  ||||| | || |||| ||||||||||||||||||||||||||||||| ||||||| | |||||||||| |||||||||    
T  778 caaaatcagaatttaaaatctatactactgaagtatacctcacccttaccttaattcagatgaacaa-ttctaca-agaatctggttcccttggctct 873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 124
Target Start/End: Complemental strand, 5976 - 5923
Alignment:
Q  71 tcaaaatcagaattcataacatatacaattgcagtaaacctcacccttacctta 124  Q
    |||||||||||||||| ||| ||||||||||| |||||||||||||||||||||    
T  5976 tcaaaatcagaattcaaaacctatacaattgcggtaaacctcacccttacctta 5923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 124
Target Start/End: Complemental strand, 19711 - 19658
Alignment:
Q  71 tcaaaatcagaattcataacatatacaattgcagtaaacctcacccttacctta 124  Q
    |||||||||||||||| ||  |||||||||||||||||||||||||||||||||    
T  19711 tcaaaatcagaattcagaatctatacaattgcagtaaacctcacccttacctta 19658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0790 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0790
Description:

Target: scaffold0790; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 187 - 227
Target Start/End: Original strand, 5576 - 5616
Alignment:
Q  187 ttttctcccaaaacttgttttacgtgaaactgcttctgact 227  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  5576 ttttctcccaaaacttgttttacgtgaaactgcttctgact 5616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 157 - 201
Target Start/End: Complemental strand, 4114 - 4070
Alignment:
Q  157 ttctcttggctcttctcccttgctcttggtttttctcccaaaact 201  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  4114 ttctcttggctcttctctcttgctcttggtttttctcccaaaact 4070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 5)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 29586 - 29642
Alignment:
Q  160 tcttggctcttctcccttgctcttggtttttctcccaaaacttgttttacgtgaaac 216  Q
    ||||||||||||||||||| ||||||||||||||||||||||  || ||||||||||    
T  29586 tcttggctcttctcccttgttcttggtttttctcccaaaactaattgtacgtgaaac 29642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 249
Target Start/End: Original strand, 37180 - 37272
Alignment:
Q  160 tcttggctcttctcccttgctcttggtttttctcccaaaacttgttttacgtgaaactgct---tctgactttctatttttcctaactcccaa 249  Q
    ||||||||||||||| ||| ||||||||||||||||||||||  || |||||||||| | |   ||||||| ||| |||||| ||||||||||    
T  37180 tcttggctcttctcctttgttcttggtttttctcccaaaactgattgtacgtgaaacagttttctctgactctctttttttcttaactcccaa 37272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 103 - 140
Target Start/End: Original strand, 37110 - 37147
Alignment:
Q  103 agtaaacctcacccttaccttaattcagatgaacaatt 140  Q
    ||||||||||||||||||||||||||||||||||||||    
T  37110 agtaaacctcacccttaccttaattcagatgaacaatt 37147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 173 - 249
Target Start/End: Original strand, 39579 - 39655
Alignment:
Q  173 cccttgctcttggtttt-tctcccaaaacttgttttacgtgaaactgcttctgactttctatttttcctaactcccaa 249  Q
    |||||| |||||||||| ||||||||||||||||| |||| |||||||||||||| || |  ||||||||||||||||    
T  39579 cccttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacctt-ttcttttcctaactcccaa 39655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 138
Target Start/End: Original strand, 29516 - 29551
Alignment:
Q  103 agtaaacctcacccttaccttaattcagatgaacaa 138  Q
    |||||| |||||||||||||||||||||||||||||    
T  29516 agtaaatctcacccttaccttaattcagatgaacaa 29551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 2)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 72 - 124
Target Start/End: Complemental strand, 50164 - 50112
Alignment:
Q  72 caaaatcagaattcataacatatacaattgcagtaaacctcacccttacctta 124  Q
    ||||||||||||||| ||| ||||||||||| |||||||||||||||||||||    
T  50164 caaaatcagaattcagaacctatacaattgcggtaaacctcacccttacctta 50112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 159 - 219
Target Start/End: Original strand, 52090 - 52154
Alignment:
Q  159 ctcttggctcttctcc---cttgctcttggtttttctcccaaaacttgttt-tacgtgaaactgc 219  Q
    ||||||||||||||||   ||| |||||||||||||||||||||  ||||| |||||||||||||    
T  52090 ctcttggctcttctcctagctttctcttggtttttctcccaaaaactgtttgtacgtgaaactgc 52154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0635 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 179 - 288
Target Start/End: Original strand, 8060 - 8177
Alignment:
Q  179 ctcttggtttttctcccaaaacttgttt-tacgt-----gaaactgcttctgactttctatttttcctaactcccaatattaactccc--tttatttcac 270  Q
    |||||||||||||||||||||||||||| |||||     |||||||||||||||||   | ||||||||||||| ||  |||||||||  ||||||| ||    
T  8060 ctcttggtttttctcccaaaacttgtttgtacgtgaaacgaaactgcttctgacttctcaattttcctaactcctaaacttaactccccttttattttac 8159  T
Q  271 ttaactccctctcaattt 288  Q
    ||||||||| || |||||    
T  8160 ttaactcccacttaattt 8177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0331 (Bit Score: 39; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 106 - 207
Target Start/End: Original strand, 19507 - 19607
Alignment:
Q  106 aaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctcttctcccttgctcttggtttt-tctcccaaaacttgt 204  Q
    |||||| ||||||||||||| |||||||||||| | | ||| | |||| | |||||||||||||||||||||| |||||||||| ||||||||| | |||    
T  19507 aaacctgacccttaccttaaatcagatgaacaaatgc-aca-acaatcagattctcttggctcttctcccttgttcttggttttctctcccaaagcctgt 19604  T
Q  205 ttt 207  Q
    |||    
T  19605 ttt 19607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0331; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 226
Target Start/End: Original strand, 4800 - 4869
Alignment:
Q  161 cttggctcttctcc---cttgctcttggtttttctccc-aaaacttgttttacgtgaaactgcttctgac 226  Q
    ||||||||||||||   ||| ||||||||||||||||| ||||||  || ||||||||||||||||||||    
T  4800 cttggctcttctcctagctttctcttggtttttctcccaaaaactatttgtacgtgaaactgcttctgac 4869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 39; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 169
Target Start/End: Complemental strand, 59614 - 59550
Alignment:
Q  103 agtaaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctct 169  Q
    |||||||||||||||||||||||||||||||||||| |||||| || |||||| ||| |||||||||    
T  59614 agtaaacctcacccttaccttaattcagatgaacaa-ttctac-tacaatctgattcacttggctct 59550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 169
Target Start/End: Complemental strand, 61177 - 61114
Alignment:
Q  103 agtaaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctct 169  Q
    ||||||||||||| |||||||||||||||||||||| ||||||| | |||||||||| |||||||||    
T  61177 agtaaacctcacc-ttaccttaattcagatgaacaa-ttctaca-acaatctggttcacttggctct 61114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 106 - 287
Target Start/End: Original strand, 13828 - 14009
Alignment:
Q  106 aaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctcttctcccttgctcttggt--ttttctcccaaaacttg 203  Q
    |||||||||||||||||||||||||| |||||| | | ||| |||||||||||| ||||||||| ||   |  |||||     |||||||||||||||||    
T  13828 aaacctcacccttaccttaattcagacgaacaaatgc-aca-aaaatctggttcacttggctctact---tgtctcttctcccttttctcccaaaacttg 13922  T
Q  204 tttt-acgtgaaactgctt-ctgactttctatttttcctaactcccaatat-taactccc-tttatttcacttaactccctctcaatt 287  Q
    |||| |||| ||||||||| |||||| | | |||| ||||||||||||||  |||||||| ||||||||| |||||||||||| ||||    
T  13923 ttttcacgtaaaactgctttctgactgtttctttt-cctaactcccaatacataactcccctttatttcatttaactccctcttaatt 14009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 39; Significance: 0.000000000001; HSPs: 4)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 201
Target Start/End: Original strand, 147962 - 148058
Alignment:
Q  103 agtaaacctcacccttaccttaattcagatgaacaatttctacataaaatctggttctcttggctcttctcccttgctcttggtttttctcccaaaact 201  Q
    ||||||||||||||||||||||| |||||  ||||| | | ||| |  ||| | ||||||||| ||||||| |||||||||||||||||||||||||||    
T  147962 agtaaacctcacccttaccttaaatcagaaaaacaaatgc-aca-acgatcggattctcttggttcttctctcttgctcttggtttttctcccaaaact 148058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 173 - 249
Target Start/End: Complemental strand, 173560 - 173484
Alignment:
Q  173 cccttgctcttggtttt-tctcccaaaacttgttttacgtgaaactgcttctgactttctatttttcctaactcccaa 249  Q
    |||||| |||||||||| ||||||||||||||||| |||| |||||||||||||| || |  ||||||||||||||||    
T  173560 cccttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacctt-ttcttttcctaactcccaa 173484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 155201 - 155245
Alignment:
Q  157 ttctcttggctcttctcccttgctcttggtttttctcccaaaact 201  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||    
T  155201 ttctcttggttcttctctcttgctcttggtttttctcccaaaact 155245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #4
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 71 - 132
Target Start/End: Complemental strand, 55968 - 55907
Alignment:
Q  71 tcaaaatcagaattca-taacatatacaattgcagtaaacctcacccttaccttaattcagat 132  Q
    |||||||||||||||| |||| ||||| | || || |||||||||||||||||||||||||||    
T  55968 tcaaaatcagaattcaataac-tatactactgaagcaaacctcacccttaccttaattcagat 55907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0518 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0518
Description:

Target: scaffold0518; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 71 - 124
Target Start/End: Original strand, 8449 - 8502
Alignment:
Q  71 tcaaaatcagaattcataacatatacaattgcagtaaacctcacccttacctta 124  Q
    |||||||||||||||| ||| ||||||||||  |||||||||||||||||||||    
T  8449 tcaaaatcagaattcagaacctatacaattggggtaaacctcacccttacctta 8502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 38; Significance: 0.000000000004; HSPs: 2)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 173 - 249
Target Start/End: Original strand, 8188 - 8264
Alignment:
Q  173 cccttgctcttggtttt-tctcccaaaacttgttttacgtgaaactgcttctgactttctatttttcctaactcccaa 249  Q
    |||||| |||||||||| ||||||||||||||||| |||| |||||||||||||| || |  ||||||||||||||||    
T  8188 cccttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacctt-ttcttttcctaactcccaa 8264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 249
Target Start/End: Original strand, 1043 - 1119
Alignment:
Q  173 cccttgctcttggtttt-tctcccaaaacttgttttacgtgaaactgcttctgactttctatttttcctaactcccaa 249  Q
    |||||| |||||||||| ||||||||||||||||| |||| ||||| ||||| || || |  ||||||||||||||||    
T  1043 cccttgttcttggttttctctcccaaaacttgtttcacgtaaaactacttctaacctt-ttcttttcctaactcccaa 1119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0429 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0429
Description:

Target: scaffold0429; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 167 - 204
Target Start/End: Original strand, 224 - 261
Alignment:
Q  167 tcttctcccttgctcttggtttttctcccaaaacttgt 204  Q
    ||||||||||||||||||||||||||||||||||||||    
T  224 tcttctcccttgctcttggtttttctcccaaaacttgt 261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 71 - 120
Target Start/End: Original strand, 15372 - 15421
Alignment:
Q  71 tcaaaatcagaattcataacatatacaattgcagtaaacctcacccttac 120  Q
    |||||||||||||||| ||| ||||||||||| |||||||||||||||||    
T  15372 tcaaaatcagaattcagaacctatacaattgcggtaaacctcacccttac 15421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 235 - 308
Target Start/End: Original strand, 12469 - 12544
Alignment:
Q  235 tttcctaactcccaa--tattaactcccttt-atttcacttaactccctctcaatttctatttattctaatttaatc 308  Q
    |||||||||||||||  |||||||||||||| ||||||||||||||||||| || ||||||| ||||||||| ||||    
T  12469 tttcctaactcccaaaatattaactcccttttatttcacttaactccctct-aaattctattaattctaattaaatc 12544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 38; Significance: 0.000000000004; HSPs: 3)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 173 - 249
Target Start/End: Complemental strand, 29144 - 29068
Alignment:
Q  173 cccttgctcttggtttt-tctcccaaaacttgttttacgtgaaactgcttctgactttctatttttcctaactcccaa 249  Q
    |||||| |||||||||| ||||||||||||||||| |||| |||||||||||||| || |  ||||||||||||||||    
T  29144 cccttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacctt-ttcttttcctaactcccaa 29068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 173 - 249
Target Start/End: Complemental strand, 34545 - 34469
Alignment:
Q  173 cccttgctcttggtttt-tctcccaaaacttgttttacgtgaaactgcttctgactttctatttttcctaactcccaa 249  Q
    |||||| |||||||||| ||||||||||||||||| |||| |||||||||||||| || |  ||||||||||||||||    
T  34545 cccttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctgacctt-ttcttttcctaactcccaa 34469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 201
Target Start/End: Complemental strand, 50818 - 50777
Alignment:
Q  160 tcttggctcttctcccttgctcttggtttttctcccaaaact 201  Q
    ||||||||| ||||||||||||| ||||||||||||||||||    
T  50818 tcttggctcctctcccttgctctaggtttttctcccaaaact 50777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1508 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1508
Description:

Target: scaffold1508; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 72 - 124
Target Start/End: Complemental strand, 1597 - 1545
Alignment:
Q  72 caaaatcagaattcataacatatacaattgcagtaaacctcacccttacctta 124  Q
    ||||||| ||||||||||| ||||||||||| |||||| ||||||||||||||    
T  1597 caaaatctgaattcataacctatacaattgcggtaaacttcacccttacctta 1545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 37; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 2478 - 2422
Alignment:
Q  161 cttggctcttctcccttgctcttggtttt-tctcccaaaacttgttttacgtgaaac 216  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||| |||| ||||    
T  2478 cttggctcttctcccttgttcttggttttctctcccaaaacttgtttcacgtaaaac 2422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 124
Target Start/End: Complemental strand, 2567 - 2514
Alignment:
Q  71 tcaaaatcagaattcataacatatacaattgcagtaaacctcacccttacctta 124  Q
    |||||||||||||||| ||  || ||||||| ||||||||||||||||||||||    
T  2567 tcaaaatcagaattcagaatctacacaattgaagtaaacctcacccttacctta 2514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 72 - 124
Target Start/End: Original strand, 1 - 53
Alignment:
Q  72 caaaatcagaattcataacatatacaattgcagtaaacctcacccttacctta 124  Q
    ||||||||||||| | ||| ||||||||||| |||||||||||||||||||||    
T  1 caaaatcagaatttagaacctatacaattgcggtaaacctcacccttacctta 53  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 72 - 124
Target Start/End: Original strand, 42896 - 42948
Alignment:
Q  72 caaaatcagaattcataacatatacaattgcagtaaacctcacccttacctta 124  Q
    |||||||||||| || ||| ||||||||||| |||||||||||||||||||||    
T  42896 caaaatcagaatccagaacctatacaattgcggtaaacctcacccttacctta 42948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 36; Significance: 0.00000000007; HSPs: 2)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 165 - 215
Target Start/End: Complemental strand, 7610 - 7559
Alignment:
Q  165 gctcttctcccttgctcttggtttttctcccaaaacttg-ttttacgtgaaa 215  Q
    |||||||||||||| |||||||||||||||||||||||| || |||||||||    
T  7610 gctcttctcccttgttcttggtttttctcccaaaacttgattgtacgtgaaa 7559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 138
Target Start/End: Complemental strand, 7689 - 7654
Alignment:
Q  103 agtaaacctcacccttaccttaattcagatgaacaa 138  Q
    ||||||||||||||||||||||||||||| ||||||    
T  7689 agtaaacctcacccttaccttaattcagacgaacaa 7654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 36; Significance: 0.00000000007; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 161 - 238
Target Start/End: Original strand, 21941 - 22021
Alignment:
Q  161 cttggctcttctcc---cttgctcttggtttttctcccaaaacttgttt-tacgtgaaactgcttctgactttctatttttc 238  Q
    ||||||||||||||   ||| |||||||||||||||||||||  ||||| ||||||||||| ||||||||||| ||||||||    
T  21941 cttggctcttctcctagctttctcttggtttttctcccaaaaactgtttgtacgtgaaactacttctgacttt-tatttttc 22021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 228
Target Start/End: Original strand, 34618 - 34665
Alignment:
Q  182 ttggtttttctcccaaaacttgttt-tacgtgaaactgcttctgactt 228  Q
    ||||||||||||| ||||||||||| |||||||||||| |||||||||    
T  34618 ttggtttttctccgaaaacttgtttgtacgtgaaactgtttctgactt 34665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091 (Bit Score: 36; Significance: 0.00000000007; HSPs: 2)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 103 - 138
Target Start/End: Complemental strand, 21934 - 21899
Alignment:
Q  103 agtaaacctcacccttaccttaattcagatgaacaa 138  Q
    ||||||||||||||||||||||||||||||||||||    
T  21934 agtaaacctcacccttaccttaattcagatgaacaa 21899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091; HSP #2
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 103 - 138
Target Start/End: Complemental strand, 26131 - 26096
Alignment:
Q  103 agtaaacctcacccttaccttaattcagatgaacaa 138  Q
    ||||||||||||||||||||||||||||||||||||    
T  26131 agtaaacctcacccttaccttaattcagatgaacaa 26096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 14934 - 14884
Alignment:
Q  179 ctcttggtttttctcccaaaacttgttt-tacgtgaaactgcttctgactt 228  Q
    |||||||||||||||||||||||||||| ||||||||| || |||||||||    
T  14934 ctcttggtttttctcccaaaacttgtttgtacgtgaaattgtttctgactt 14884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0848 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0848
Description:

Target: scaffold0848; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 2151 - 2114
Alignment:
Q  1 tattaaatcaaccaattacaacttataaacctaattcc 38  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  2151 tattaaaccaaccaattacaacttataaacctaattcc 2114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0506 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0506
Description:

Target: scaffold0506; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 124
Target Start/End: Original strand, 9192 - 9245
Alignment:
Q  71 tcaaaatcagaattcataacatatacaattgcagtaaacctcacccttacctta 124  Q
    |||||||||||||||| ||   ||||||||| ||||||||||||||||||||||    
T  9192 tcaaaatcagaattcagaatcaatacaattgaagtaaacctcacccttacctta 9245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0414 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0414
Description:

Target: scaffold0414; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 274
Target Start/End: Original strand, 934 - 1051
Alignment:
Q  161 cttggctcttctcccttgctcttggtttttctcccaaaa--cttg-ttttacgtgaaactgcttctgactttctatttttcctaactcccaata-ttaac 256  Q
    |||||||||||||| ||| ||||||||||||||||||||  |||| |||| |||||||| | |||| || ||||  |||||||||||||||| | |||||    
T  934 cttggctcttctcctttgttcttggtttttctcccaaaactcttgttttttcgtgaaacagtttctaac-ttct-cttttcctaactcccaacacttaac 1031  T
Q  257 t--ccctttatttcacttaa 274  Q
    |  |||||||||||||||||    
T  1032 tccccctttatttcacttaa 1051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 249
Target Start/End: Original strand, 13742 - 13818
Alignment:
Q  173 cccttgctcttggtttt-tctcccaaaacttgttttacgtgaaactgcttctgactttctatttttcctaactcccaa 249  Q
    |||||| |||||||||| ||||||||||||||||| |||| ||||||||||| || || |  ||||||||||||||||    
T  13742 cccttgttcttggttttctctcccaaaacttgtttcacgtaaaactgcttctaacatt-ttcttttcctaactcccaa 13818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 201
Target Start/End: Original strand, 18546 - 18583
Alignment:
Q  164 ggctcttctcccttgctcttggtttttctcccaaaact 201  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  18546 ggctcctctcccttgctcttggtttttctcccaaaact 18583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1290 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold1290
Description:

Target: scaffold1290; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 106 - 138
Target Start/End: Complemental strand, 426 - 394
Alignment:
Q  106 aaacctcacccttaccttaattcagatgaacaa 138  Q
    |||||||||||||||||||||||||||||||||    
T  426 aaacctcacccttaccttaattcagatgaacaa 394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0607 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 161 - 223
Target Start/End: Original strand, 3886 - 3952
Alignment:
Q  161 cttggctcttctcc---cttgctcttggtttttctcccaaaacttgttt-tacgtgaaactgcttct 223  Q
    ||||||||||||||   ||| |||||||||||||||||||||  ||||| |||||||||||||||||    
T  3886 cttggctcttctcctagctttctcttggtttttctcccaaaaactgtttgtacgtgaaactgcttct 3952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0600 (Bit Score: 33; Significance: 0.000000004; HSPs: 2)
Name: scaffold0600
Description:

Target: scaffold0600; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 72 - 124
Target Start/End: Original strand, 48 - 100
Alignment:
Q  72 caaaatcagaattcataacatatacaattgcagtaaacctcacccttacctta 124  Q
    ||||||||||||||| ||| ||||  ||||| |||||||||||||||||||||    
T  48 caaaatcagaattcagaacctataagattgcggtaaacctcacccttacctta 100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0600; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 141 - 190
Target Start/End: Original strand, 804 - 857
Alignment:
Q  141 tctacataaaatctggttctctt----ggctcttctcccttgctcttggttttt 190  Q
    |||||||||||||||||||||||    ||||||||||||||| |||||||||||    
T  804 tctacataaaatctggttctcttacttggctcttctcccttgttcttggttttt 857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0481 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 161 - 223
Target Start/End: Complemental strand, 633 - 567
Alignment:
Q  161 cttggctcttctcc---cttgctcttggtttttctcccaaaacttgttt-tacgtgaaactgcttct 223  Q
    ||||||||||||||   ||| |||||| |||||||||||||| |||||| |||||||||||||||||    
T  633 cttggctcttctcctaactttctcttgatttttctcccaaaaattgtttgtacgtgaaactgcttct 567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0402 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0402
Description:

Target: scaffold0402; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 106 - 138
Target Start/End: Original strand, 15945 - 15977
Alignment:
Q  106 aaacctcacccttaccttaattcagatgaacaa 138  Q
    |||||||||||||||||||||||||||||||||    
T  15945 aaacctcacccttaccttaattcagatgaacaa 15977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 186 - 279
Target Start/End: Original strand, 8631 - 8726
Alignment:
Q  186 tttttctcccaaaact-tgttttacgtgaaactgcttctgactt-tctatttttcctaactcccaatattaact-ccctttatttcacttaactccc 279  Q
    |||| ||||||||||| |||| |||||||||||||||||||||| || |||||| |||||||| ||  |||||| |||||||||| | |||||||||    
T  8631 ttttcctcccaaaactctgttgtacgtgaaactgcttctgacttctccattttt-ctaactcctaaacttaactcccctttattttatttaactccc 8726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 72 - 124
Target Start/End: Original strand, 25192 - 25244
Alignment:
Q  72 caaaatcagaattcataacatatacaattgcagtaaacctcacccttacctta 124  Q
    ||||||||||||||| ||| ||||  ||||| |||||||||||||||||||||    
T  25192 caaaatcagaattcagaacctataagattgcggtaaacctcacccttacctta 25244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 75 - 123
Target Start/End: Original strand, 346 - 394
Alignment:
Q  75 aatcagaattcataacatatacaattgcagtaaacctcacccttacctt 123  Q
    |||||||||||| ||  |||| |||||||||||||||||||||||||||    
T  346 aatcagaattcagaatctatagaattgcagtaaacctcacccttacctt 394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 38
Target Start/End: Complemental strand, 18770 - 18735
Alignment:
Q  3 ttaaatcaaccaattacaacttataaacctaattcc 38  Q
    |||||||||||||||||||||| |||||||||||||    
T  18770 ttaaatcaaccaattacaacttctaaacctaattcc 18735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0323 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0323
Description:

Target: scaffold0323; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 201
Target Start/End: Original strand, 8318 - 8349
Alignment:
Q  170 tctcccttgctcttggtttttctcccaaaact 201  Q
    ||||||||||||||||||||||||||||||||    
T  8318 tctcccttgctcttggtttttctcccaaaact 8349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 41
Target Start/End: Complemental strand, 6814 - 6775
Alignment:
Q  2 attaaatcaaccaattacaacttataaacctaattcctaa 41  Q
    |||||| |||||||||||||||| ||||||||||||||||    
T  6814 attaaaacaaccaattacaacttctaaacctaattcctaa 6775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 38
Target Start/End: Original strand, 13872 - 13907
Alignment:
Q  3 ttaaatcaaccaattacaacttataaacctaattcc 38  Q
    |||||||||||||||||||||| |||||||||||||    
T  13872 ttaaatcaaccaattacaacttctaaacctaattcc 13907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 138
Target Start/End: Original strand, 21857 - 21892
Alignment:
Q  103 agtaaacctcacccttaccttaattcagatgaacaa 138  Q
    ||||||||||||||||||||||||||||| ||||||    
T  21857 agtaaacctcacccttaccttaattcagacgaacaa 21892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 10196 - 10247
Alignment:
Q  179 ctcttggtttttctcccaaaact-tgttttacgtg-aaactgcttctgactt 228  Q
    ||||||||||||||||||||||| |||| |||||| ||||||||||||||||    
T  10196 ctcttggtttttctcccaaaactctgttgtacgtgaaaactgcttctgactt 10247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 32; Significance: 0.00000002; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 3627 - 3576
Alignment:
Q  179 ctcttggtttttctcccaaaact-tgttttacgtg-aaactgcttctgactt 228  Q
    ||||||||||||||||||||||| |||| |||||| ||||||||||||||||    
T  3627 ctcttggtttttctcccaaaactctgttgtacgtgaaaactgcttctgactt 3576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 11587 - 11536
Alignment:
Q  179 ctcttggtttttctcccaaaact-tgttttacgtg-aaactgcttctgactt 228  Q
    ||||||||||||||||||||||| |||| |||||| ||||||||||||||||    
T  11587 ctcttggtttttctcccaaaactctgttgtacgtgaaaactgcttctgactt 11536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 203
Target Start/End: Original strand, 3933 - 3980
Alignment:
Q  157 ttctcttggctcttctcccttgctcttggtttt-tctcccaaaacttg 203  Q
    |||||||||||||||||||||| |||||||||| ||||||||| ||||    
T  3933 ttctcttggctcttctcccttgttcttggttttctctcccaaagcttg 3980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 33879 - 33828
Alignment:
Q  179 ctcttggtttttctcccaaaact-tgttttacgtg-aaactgcttctgactt 228  Q
    ||||||||||||||||||||||| |||| |||||| ||||||||||||||||    
T  33879 ctcttggtttttctcccaaaactctgttgtacgtgaaaactgcttctgactt 33828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 226
Target Start/End: Original strand, 117006 - 117061
Alignment:
Q  173 cccttgctcttggtttt-tctcccaaaacttgtttt-acgtgaaactgcttctgac 226  Q
    |||||| |||||||||| |||||||||||||||||| |||| ||||||||||||||    
T  117006 cccttgttcttggttttctctcccaaaacttgttttcacgtaaaactgcttctgac 117061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 159 - 223
Target Start/End: Original strand, 11748 - 11816
Alignment:
Q  159 ctcttggctcttctcc---cttgctcttggtttttctcccaaaacttgttt-tacgtgaaactgcttct 223  Q
    ||||||||||||||||   ||| |||||||||||||||||||||  ||||| ||||||||| |||||||    
T  11748 ctcttggctcttctcctagctttctcttggtttttctcccaaaaactgtttgtacgtgaaattgcttct 11816  T

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Target: scaffold0337 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 173 - 226
Target Start/End: Complemental strand, 8713 - 8659
Alignment:
Q  173 cccttgctcttggtttt-tctcccaaaacttgttttacgtgaaactgcttctgac 226  Q
    |||||| ||||| |||| ||||||||||||||||| |||| ||||||||||||||    
T  8713 cccttgttcttgattttctctcccaaaacttgtttcacgtaaaactgcttctgac 8659  T

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Target: scaffold0102 (Bit Score: 31; Significance: 0.00000006; HSPs: 2)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 187 - 279
Target Start/End: Original strand, 30897 - 30992
Alignment:
Q  187 ttttctcccaaaact-tgtttt-acgtgaaactgcttctgactttctatttttcctaactccc--aatattaactccc-tttatttcacttaactccc 279  Q
    ||||||||||||||| |||||| |||| |||| ||||||||||| || |||| ||||||||||  ||||||||||||| ||||||||| |||||||||    
T  30897 ttttctcccaaaactctgttttcacgtaaaaccgcttctgactt-ctctttt-cctaactccccaaatattaactcccctttatttcatttaactccc 30992  T

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Target: scaffold0102; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 131
Target Start/End: Complemental strand, 11497 - 11464
Alignment:
Q  98 attgcagtaaacctcacccttaccttaattcaga 131  Q
    |||| |||||||||||||||||||||||||||||    
T  11497 attgaagtaaacctcacccttaccttaattcaga 11464  T

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Target: scaffold0523 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0523
Description:

Target: scaffold0523; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 131
Target Start/End: Complemental strand, 6913 - 6880
Alignment:
Q  98 attgcagtaaacctcacccttaccttaattcaga 131  Q
    |||| |||||||||||||||||||||||||||||    
T  6913 attgaagtaaacctcacccttaccttaattcaga 6880  T

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Target: scaffold0334 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 222
Target Start/End: Original strand, 2230 - 2275
Alignment:
Q  179 ctcttggtttttctcccaaaact-tgttt-tacgtgaaactgcttc 222  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||    
T  2230 ctcttggtttttctcccaaaactctgtttgtacgtgaaactgcttc 2275  T

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Target: scaffold0216 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 223
Target Start/End: Original strand, 22426 - 22471
Alignment:
Q  179 ctcttggtttttctcccaaaacttgttt-tacgtgaaactgcttct 223  Q
    |||||||||||||||||||||  ||||| |||||||||||||||||    
T  22426 ctcttggtttttctcccaaaaagtgtttgtacgtgaaactgcttct 22471  T

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Target: scaffold0124 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 223
Target Start/End: Complemental strand, 34221 - 34169
Alignment:
Q  173 cccttgctcttggtt--tttctcccaaaacttgttttacgtgaaactgcttct 223  Q
    |||||| ||||||||  ||||||||||||||||||| |||| |||||||||||    
T  34221 cccttgttcttggttcttttctcccaaaacttgtttcacgtaaaactgcttct 34169  T

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Target: scaffold0088 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 131
Target Start/End: Original strand, 32537 - 32570
Alignment:
Q  98 attgcagtaaacctcacccttaccttaattcaga 131  Q
    |||| |||||||||||||||||||||||||||||    
T  32537 attgaagtaaacctcacccttaccttaattcaga 32570  T

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Target: scaffold0031 (Bit Score: 30; Significance: 0.0000003; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 138
Target Start/End: Original strand, 121943 - 121972
Alignment:
Q  109 cctcacccttaccttaattcagatgaacaa 138  Q
    ||||||||||||||||||||||||||||||    
T  121943 cctcacccttaccttaattcagatgaacaa 121972  T

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Target: scaffold0031; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 138
Target Start/End: Original strand, 132819 - 132848
Alignment:
Q  109 cctcacccttaccttaattcagatgaacaa 138  Q
    ||||||||||||||||||||||||||||||    
T  132819 cctcacccttaccttaattcagatgaacaa 132848  T

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