View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6490_low_10 (Length: 251)
Name: NF6490_low_10
Description: NF6490
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6490_low_10 |
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Alignment Details
Target: chr5 (Bit Score: 160; Significance: 2e-85; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 73 - 236
Target Start/End: Original strand, 7135022 - 7135185
Alignment:
| Q |
73 |
ccactcatcaatgctattagactttatcataggtacacctaaatttggcaaacgttgaggatcatggcattgcaaatttacgtgtattggtttccatgaa |
172 |
Q |
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| T |
7135022 |
ccactcatcaatgctattagactttatcataggtacacctaaatttggcaaacgttgaggatcatggcattgcaaatttacgtgtattggtttccatgaa |
7135121 |
T |
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| Q |
173 |
ggagcaattattttaccaagatttgcaccgctactgacggttacttgcatgagaattatactcc |
236 |
Q |
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| T |
7135122 |
ggatcaattattttaccaagatttgcaccgctactgacggttacttgcatgagaattatactcc |
7135185 |
T |
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