View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6491_low_5 (Length: 364)
Name: NF6491_low_5
Description: NF6491
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6491_low_5 |
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Alignment Details
Target: chr2 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 19 - 294
Target Start/End: Complemental strand, 32006064 - 32005791
Alignment:
| Q |
19 |
agggaaacaacaaaatgtagcaccacaccacactctatattatggatattatttagtattatgaaattttgtttgttagattggtgaattggcaattttg |
118 |
Q |
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| T |
32006064 |
agggaaacaacaaaatgtagcaccacaccacactctatattatggatattatttagtattatgaaattttgtttgttagattggtgaattggcaattttg |
32005965 |
T |
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| Q |
119 |
ggtgatagtgtcagtgaagtgtgacaaatcatgtaccaatataattccatggtaaaggagctagagnnnnnnnnnnnnnnnnnnnncttaagacacatga |
218 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
32005964 |
ggtgatagtgtcagtgaagtgtgacaaatcatgtaccaatataattccatggtaaaggagctaga-aaaaaaaaaaaaaaaaaaaacttaagacacatga |
32005866 |
T |
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| Q |
219 |
aaggacaatttggtaatgctagatgaaataatattagtgtagttaaactatatgttattggatttgattattctcc |
294 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||| ||||| |
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| T |
32005865 |
aaggacaatttggtaatgctagatgaaataatattagtgtagtt-aactataggttattggattggattagtctcc |
32005791 |
T |
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