View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF6492_low_10 (Length: 248)
Name: NF6492_low_10
Description: NF6492
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6492_low_10 |
 |  |
|
| [»] chr4 (8 HSPs) |
 |  |
|
| [»] chr2 (5 HSPs) |
 |  |
|
| [»] chr7 (10 HSPs) |
 |  |
|
| [»] chr3 (11 HSPs) |
 |  |
|
| [»] chr6 (5 HSPs) |
 |  |
|
| [»] chr1 (6 HSPs) |
 |  |
|
| [»] scaffold0003 (1 HSPs) |
 |  |  |
|
| [»] scaffold0032 (1 HSPs) |
 |  |
|
| [»] chr8 (3 HSPs) |
 |  |
|
| [»] scaffold0121 (1 HSPs) |
 |  |  |
|
| [»] scaffold0746 (1 HSPs) |
 |  |  |
|
| [»] scaffold0070 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr4 (Bit Score: 225; Significance: 1e-124; HSPs: 8)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 8 - 248
Target Start/End: Complemental strand, 15647903 - 15647663
Alignment:
| Q |
8 |
gacatcatcacatcaagaccttcagcagctaacagaaacagaaaaggggaaagaggatccccttgacgaagtcctctttcaaaatgaaactcatcggttg |
107 |
Q |
| |
|
||||||||||||||||||||||| ||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15647903 |
gacatcatcacatcaagaccttcggcagcaaagagaaatagaaaaggggaaagaggatccccttgacgaagtcctctttcaaaatgaaactcatcggttg |
15647804 |
T |
 |
| Q |
108 |
gacaaccattcactaacacagatgctgtagcagtggtaacacactccataatccaacaacgccacttagacggaaaattcattttaatcatcacctcatc |
207 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15647803 |
gacaaccattcactaacacagatgctgtagcagtggtaacacactccataatccaacaacgccacttagacggaaaattcattttaatcatcacctcatc |
15647704 |
T |
 |
| Q |
208 |
taagtaacaccaatccaccgagtcataagccttttcaaaat |
248 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15647703 |
taagtaacaccaatccaccgagtcataagccttttcaaaat |
15647663 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 10 - 248
Target Start/End: Complemental strand, 23156984 - 23156746
Alignment:
| Q |
10 |
catcatcacatcaagaccttcagcagctaacagaaacagaaaaggggaaagaggatccccttgacgaagtcctctttcaaaatgaaactcatcggttgga |
109 |
Q |
| |
|
||||||||||| ||| |||||| ||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| || ||| |
|
|
| T |
23156984 |
catcatcacattaaggccttcaacagctaacagaaacagaaaaggggaaagaggatccccttgacggagttctctttcaaaatgaaactcatcagtcgga |
23156885 |
T |
 |
| Q |
110 |
caaccattcactaacacagatgctgtagcagtggtaacacactccataatccaacaacgccacttagacggaaaattcattttaatcatcacctcatcta |
209 |
Q |
| |
|
||||||||||||| ||| || |||||||| || | ||| ||||||||||||||| |||||||| || |||||||||||||||| |||||||||||||| |
|
|
| T |
23156884 |
caaccattcactagcacggaagctgtagccgttgcaacgcactccataatccaagaacgccacatacgcggaaaattcattttacccatcacctcatcta |
23156785 |
T |
 |
| Q |
210 |
agtaacaccaatccaccgagtcataagccttttcaaaat |
248 |
Q |
| |
|
|||| | |||||||||||| ||||| ||||||||||||| |
|
|
| T |
23156784 |
agtacccccaatccaccgaatcatacgccttttcaaaat |
23156746 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 8 - 248
Target Start/End: Complemental strand, 17825617 - 17825377
Alignment:
| Q |
8 |
gacatcatcacatcaagaccttcagcagctaacagaaacagaaaaggggaaagaggatccccttgacgaagtcctctttcaaaatgaaactcatcggttg |
107 |
Q |
| |
|
||||||||||||| |||||||||||||||||||| ||||| ||| ||||||||||| |||||||||||||| ||||| |||||||| ||||||| || | |
|
|
| T |
17825617 |
gacatcatcacattaagaccttcagcagctaacaaaaacaaaaatggggaaagagggtccccttgacgaaggcctctctcaaaatggaactcatttgtcg |
17825518 |
T |
 |
| Q |
108 |
gacaaccattcactaacacagatgctgtagcagtggtaacacactccataatccaacaacgccacttagacggaaaattcattttaatcatcacctcatc |
207 |
Q |
| |
|
|||||||||| ||||| || ||||||||||| || |||| |||||||||||||||| | | |||| || |||||||||||||| |||||||||||| |
|
|
| T |
17825517 |
gacaaccatttactaatactgatgctgtagccgttgtaatacactccataatccaagagcaccacaggtgcgaaaaattcattttaaccatcacctcatc |
17825418 |
T |
 |
| Q |
208 |
taagtaacaccaatccaccgagtcataagccttttcaaaat |
248 |
Q |
| |
|
|||||| | | ||||||| || ||||| | |||||||||| |
|
|
| T |
17825417 |
taagtacctcaaatccacggaatcatacactttttcaaaat |
17825377 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 62 - 207
Target Start/End: Original strand, 36952638 - 36952783
Alignment:
| Q |
62 |
ggatccccttgacgaagtcctctttcaaaatgaaactcatcggttggacaaccattcactaacacagatgctgtagcagtggtaacacactccataatcc |
161 |
Q |
| |
|
|||||||||||||| || || |||||| || ||||||||| || || || ||||| ||||||||||||| || || || |||| |||||||||||||| |
|
|
| T |
36952638 |
ggatccccttgacggagacccttttcaagattaaactcatcagtcgggcacccattaactaacacagatgtcgtcgccgttgtaatacactccataatcc |
36952737 |
T |
 |
| Q |
162 |
aacaacgccacttagacggaaaattcattttaatcatcacctcatc |
207 |
Q |
| |
|
|| | ||||| | ||||||||||||| |||||||| |||||||| |
|
|
| T |
36952738 |
aagaccgccaaacacacggaaaattcatcttaatcataacctcatc |
36952783 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 50 - 248
Target Start/End: Complemental strand, 10348485 - 10348289
Alignment:
| Q |
50 |
aaaggggaaagaggatccccttgacgaagtcctctttcaaaatgaaactcatcggttggacaaccattcactaacacagatgctgtagcagtggtaacac |
149 |
Q |
| |
|
|||||||| ||||| ||||||||||| | |||||||||||| ||||||||| || ||||| ||||| || || || || ||||| || || || || | |
|
|
| T |
10348485 |
aaaggggagagagggtccccttgacgcaagcctctttcaaaacaaaactcatctgtcggacacccatttaccaagactgaagctgttgctgtcgttacgc |
10348386 |
T |
 |
| Q |
150 |
actccataatccaacaacgccacttagacggaaaattcattttaatcatcacctcatctaagtaacaccaatccaccgagtcataagccttttcaaaat |
248 |
Q |
| |
|
||||||||||||| |||||| ||||||||||||||||| |||||| ||||| | ||| |||||||||||||||||| ||||| ||||||| |
|
|
| T |
10348385 |
actccataatccaggcacgccataataacggaaaattcattttagacatcacttcatcaaggta--cccaatccaccgagtcatatgccttctcaaaat |
10348289 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 26695248 - 26695307
Alignment:
| Q |
43 |
aaacagaaaaggggaaagaggatccccttgacgaagtcctctttcaaaatgaaactcatc |
102 |
Q |
| |
|
||||| ||||||||||||||||||||| ||||| | ||||| | ||||||||||||||| |
|
|
| T |
26695248 |
aaacaaaaaaggggaaagaggatccccctgacgcaagcctctctgaaaatgaaactcatc |
26695307 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 83
Target Start/End: Complemental strand, 3128821 - 3128775
Alignment:
| Q |
37 |
taacagaaacagaaaaggggaaagaggatccccttgacgaagtcctc |
83 |
Q |
| |
|
|||||| |||| ||||||||||||||||||||||||||||| |||| |
|
|
| T |
3128821 |
taacaggaacaagaaaggggaaagaggatccccttgacgaagacctc |
3128775 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 137421 - 137521
Alignment:
| Q |
17 |
acatcaagaccttcagcagctaacagaaacagaaaaggggaaagaggatccccttgacgaagtcctctttcaaaatgaaactcatcggttggacaaccat |
116 |
Q |
| |
|
||||||| |||||||| || |||| ||| | |||||||||||| |||||||||||||| || || || || | ||||||||| || || |||| ||||| |
|
|
| T |
137421 |
acatcaaacccttcagctgccaacataaataaaaaaggggaaaggggatccccttgacggagccccctctcgatatgaaactcctctgtcggactaccat |
137520 |
T |
 |
| Q |
117 |
t |
117 |
Q |
| |
|
| |
|
|
| T |
137521 |
t |
137521 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 209; Significance: 1e-114; HSPs: 5)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 8 - 248
Target Start/End: Original strand, 21965979 - 21966219
Alignment:
| Q |
8 |
gacatcatcacatcaagaccttcagcagctaacagaaacagaaaaggggaaagaggatccccttgacgaagtcctctttcaaaatgaaactcatcggttg |
107 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | |
|
|
| T |
21965979 |
gacatcatcacatcaaggccttcagcagctaacagaaacagaaaaggggaaagaggatccccttgacgaagacctctttcaaaatgaaactcatcggtcg |
21966078 |
T |
 |
| Q |
108 |
gacaaccattcactaacacagatgctgtagcagtggtaacacactccataatccaacaacgccacttagacggaaaattcattttaatcatcacctcatc |
207 |
Q |
| |
|
| ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
21966079 |
ggcaaccattcactaacactgatgctgtagcagttgtaacacactccataatccaacaacgccacttagtcggaaaattcattttaatcatcacctcatc |
21966178 |
T |
 |
| Q |
208 |
taagtaacaccaatccaccgagtcataagccttttcaaaat |
248 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
21966179 |
taagtaaccccaatccaccgagtcataagccttttcaaaat |
21966219 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 117
Target Start/End: Complemental strand, 26245365 - 26245298
Alignment:
| Q |
50 |
aaaggggaaagaggatccccttgacgaagtcctctttcaaaatgaaactcatcggttggacaaccatt |
117 |
Q |
| |
|
||||| || |||||||||||||||||||| ||||| || | ||||||||| || ||||||| |||||| |
|
|
| T |
26245365 |
aaaggtgatagaggatccccttgacgaaggcctctctctatatgaaactcctcagttggactaccatt |
26245298 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 117
Target Start/End: Original strand, 45718479 - 45718546
Alignment:
| Q |
50 |
aaaggggaaagaggatccccttgacgaagtcctctttcaaaatgaaactcatcggttggacaaccatt |
117 |
Q |
| |
|
||||| || |||||||||||||||||||| ||||| || | ||||||||| || ||||||| |||||| |
|
|
| T |
45718479 |
aaaggtgatagaggatccccttgacgaaggcctctctctatatgaaactcctcagttggactaccatt |
45718546 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 217 - 246
Target Start/End: Complemental strand, 16078639 - 16078610
Alignment:
| Q |
217 |
ccaatccaccgagtcataagccttttcaaa |
246 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
16078639 |
ccaatccaccgagtcataagccttttcaaa |
16078610 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 102
Target Start/End: Original strand, 35489137 - 35489216
Alignment:
| Q |
22 |
aagaccttcagcagctaacagaaacagaaaaggggaaagaggatccccttgacgaagtcctctttcaaaatgaaactcatc |
102 |
Q |
| |
|
|||||||||||| || | |||||||| ||||||||| || |||| ||||||||| || ||||| | |||||||||||||| |
|
|
| T |
35489137 |
aagaccttcagccgcaatcagaaacataaaaggggataggggat-cccttgacggaggcctctctataaatgaaactcatc |
35489216 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 197; Significance: 1e-107; HSPs: 10)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 8 - 248
Target Start/End: Complemental strand, 37074426 - 37074186
Alignment:
| Q |
8 |
gacatcatcacatcaagaccttcagcagctaacagaaacagaaaaggggaaagaggatccccttgacgaagtcctctttcaaaatgaaactcatcggttg |
107 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | |
|
|
| T |
37074426 |
gacatcatcacatcaagaccttcagcagctaacagaaacagaaaaggggaaagaggatccccttgacgtagtcctctttcaaaatgaaactcatcggtcg |
37074327 |
T |
 |
| Q |
108 |
gacaaccattcactaacacagatgctgtagcagtggtaacacactccataatccaacaacgccacttagacggaaaattcattttaatcatcacctcatc |
207 |
Q |
| |
|
||||||||||||||||| || ||||||||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||| |
|
|
| T |
37074326 |
agcaaccattcactaacactgaagctgtagcagttgtaacacactccataatccaacaccgccacttagtcggaaaattcattttgatcatcacctcatc |
37074227 |
T |
 |
| Q |
208 |
taagtaacaccaatccaccgagtcataagccttttcaaaat |
248 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
37074226 |
taagtaaccccaatccaccgagtcataagccttttcaaaat |
37074186 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 10 - 248
Target Start/End: Original strand, 12122974 - 12123212
Alignment:
| Q |
10 |
catcatcacatcaagaccttcagcagctaacagaaacagaaaaggggaaagaggatccccttgacgaagtcctctttcaaaatgaaactcatcggttgga |
109 |
Q |
| |
|
||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||| | ||| |
|
|
| T |
12122974 |
catcatcacattaagtccttcagcagctaacagaaacagaaacggggaaagaggatccccttgacggagtccactttcaaaatgaaactcatcagccgga |
12123073 |
T |
 |
| Q |
110 |
caaccattcactaacacagatgctgtagcagtggtaacacactccataatccaacaacgccacttagacggaaaattcattttaatcatcacctcatcta |
209 |
Q |
| |
|
||||||||||||| ||| || |||||||| || ||||| ||||||||||||||| |||||||| || |||||||| ||||||| |||||||||||||| |
|
|
| T |
12123074 |
caaccattcactagcacggaagctgtagccgttgtaacgcactccataatccaagaacgccacatatgcggaaaatacattttacccatcacctcatcta |
12123173 |
T |
 |
| Q |
210 |
agtaacaccaatccaccgagtcataagccttttcaaaat |
248 |
Q |
| |
|
|||| | |||||||||||| ||||| |||||||||||| |
|
|
| T |
12123174 |
agtacctccaatccaccgaatcatacaccttttcaaaat |
12123212 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 8 - 248
Target Start/End: Original strand, 588170 - 588410
Alignment:
| Q |
8 |
gacatcatcacatcaagaccttcagcagctaacagaaacagaaaaggggaaagaggatccccttgacgaagtcctctttcaaaatgaaactcatcggttg |
107 |
Q |
| |
|
||||||||||||| ||| |||||||||||||||| ||||| ||| |||||||||||||||||||| ||||||||||||||||||||||||||||| || | |
|
|
| T |
588170 |
gacatcatcacattaaggccttcagcagctaacaaaaacaaaaacggggaaagaggatccccttggcgaagtcctctttcaaaatgaaactcatcagtcg |
588269 |
T |
 |
| Q |
108 |
gacaaccattcactaacacagatgctgtagcagtggtaacacactccataatccaacaacgccacttagacggaaaattcattttaatcatcacctcatc |
207 |
Q |
| |
|
|||| ||||| |||||||| |||| |||||| || || |||||||||||||||||| ||||||| | |||||||||||||||| |||||||||||| |
|
|
| T |
588270 |
gacacccattaactaacactgatgttgtagccgttgtgacacactccataatccaagaacgccatagacgcggaaaattcattttagccatcacctcatc |
588369 |
T |
 |
| Q |
208 |
taagtaacaccaatccaccgagtcataagccttttcaaaat |
248 |
Q |
| |
|
||| || | |||||||||||| ||||| ||||| ||||||| |
|
|
| T |
588370 |
taaatacctccaatccaccgaatcatacgccttctcaaaat |
588410 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 8 - 248
Target Start/End: Complemental strand, 22864583 - 22864343
Alignment:
| Q |
8 |
gacatcatcacatcaagaccttcagcagctaacagaaacagaaaaggggaaagaggatccccttgacgaagtcctctttcaaaatgaaactcatcggttg |
107 |
Q |
| |
|
||||||||||||| | ||||||||| ||||| || |||| ||| || ||||| |||||||||||||| || || ||||||| || ||||||||| || | |
|
|
| T |
22864583 |
gacatcatcacatttaaaccttcagctgctaaaaggaacaaaaacggagaaagcggatccccttgacggagacccctttcaagattaaactcatcagtcg |
22864484 |
T |
 |
| Q |
108 |
gacaaccattcactaacacagatgctgtagcagtggtaacacactccataatccaacaacgccacttagacggaaaattcattttaatcatcacctcatc |
207 |
Q |
| |
|
| || ||||| ||||||||||||| || || || |||| ||| |||||||||||| | ||||| | ||||||||||||| |||||||| |||||||| |
|
|
| T |
22864483 |
ggcacccattaactaacacagatgtcgtcgccgttgtaatacattccataatccaagaccgccaaacacacggaaaattcatcttaatcataacctcatc |
22864384 |
T |
 |
| Q |
208 |
taagtaacaccaatccaccgagtcataagccttttcaaaat |
248 |
Q |
| |
|
| ||| | |||||| | || |||||||| |||||||||| |
|
|
| T |
22864383 |
aatgtagccccaatcatcagaatcataagctttttcaaaat |
22864343 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 8 - 248
Target Start/End: Original strand, 47550210 - 47550450
Alignment:
| Q |
8 |
gacatcatcacatcaagaccttcagcagctaacagaaacagaaaaggggaaagaggatccccttgacgaagtcctctttcaaaatgaaactcatcggttg |
107 |
Q |
| |
|
||||||||||||| | | ||||||| ||||| || |||| ||| || ||||| |||||||||||||| || || ||||| | || ||||||||| || | |
|
|
| T |
47550210 |
gacatcatcacatttaaatcttcagctgctaaaaggaacaaaaacggagaaagcggatccccttgacggagacccctttcgagattaaactcatcagtcg |
47550309 |
T |
 |
| Q |
108 |
gacaaccattcactaacacagatgctgtagcagtggtaacacactccataatccaacaacgccacttagacggaaaattcattttaatcatcacctcatc |
207 |
Q |
| |
|
|||| ||||| ||||||||||||| || || || |||| ||| |||||||||||| | ||| | | ||||||||||||| |||||||| |||||||| |
|
|
| T |
47550310 |
gacacccattaactaacacagatgtcgtcgccgttgtaatacattccataatccaagaccgcgaaacacacggaaaattcatcttaatcataacctcatc |
47550409 |
T |
 |
| Q |
208 |
taagtaacaccaatccaccgagtcataagccttttcaaaat |
248 |
Q |
| |
|
| ||||| |||||| || || |||||||| |||||||||| |
|
|
| T |
47550410 |
aatgtaaccccaatcaacagaatcataagctttttcaaaat |
47550450 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 8 - 248
Target Start/End: Original strand, 47554675 - 47554915
Alignment:
| Q |
8 |
gacatcatcacatcaagaccttcagcagctaacagaaacagaaaaggggaaagaggatccccttgacgaagtcctctttcaaaatgaaactcatcggttg |
107 |
Q |
| |
|
||||||||||||| | | ||||||| ||||| || |||| ||| || ||||| |||||||||||||| || || ||||| | || ||||||||| || | |
|
|
| T |
47554675 |
gacatcatcacatttaaatcttcagctgctaaaaggaacaaaaacggagaaagcggatccccttgacggagacccctttcgagattaaactcatcagtcg |
47554774 |
T |
 |
| Q |
108 |
gacaaccattcactaacacagatgctgtagcagtggtaacacactccataatccaacaacgccacttagacggaaaattcattttaatcatcacctcatc |
207 |
Q |
| |
|
|||| ||||| ||||||||||||| || || || |||| ||| |||||||||||| | ||| | | ||||||||||||| |||||||| |||||||| |
|
|
| T |
47554775 |
gacacccattaactaacacagatgtcgtcgccgttgtaatacattccataatccaagaccgcgaaacacacggaaaattcatcttaatcataacctcatc |
47554874 |
T |
 |
| Q |
208 |
taagtaacaccaatccaccgagtcataagccttttcaaaat |
248 |
Q |
| |
|
| ||||| |||||| || || |||||||| |||||||||| |
|
|
| T |
47554875 |
aatgtaaccccaatcaacagaatcataagctttttcaaaat |
47554915 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 163
Target Start/End: Complemental strand, 20704329 - 20704174
Alignment:
| Q |
8 |
gacatcatcacatcaagaccttcagcagctaacagaaacagaaaaggggaaagaggatccccttgacgaagtcctctttcaaaatgaaactcatcggttg |
107 |
Q |
| |
|
|||||||| |||| ||| ||||| || ||||||| ||||| ||| |||||||||||||||||||| || || ||||| || |||||||||||||| || | |
|
|
| T |
20704329 |
gacatcataacatgaaggccttctgctgctaacaaaaacaaaaatggggaaagaggatccccttgccggagacctctctcgaaatgaaactcatccgtcg |
20704230 |
T |
 |
| Q |
108 |
gacaaccattcactaacacagatgctgtagcagtggtaacacactccataatccaa |
163 |
Q |
| |
|
| || ||||| |||| ||| || || || || || |||||||| ||||| |||||| |
|
|
| T |
20704229 |
ggcacccattaactagcacggaagcggttgccgttgtaacacattccattatccaa |
20704174 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 163
Target Start/End: Complemental strand, 20872373 - 20872218
Alignment:
| Q |
8 |
gacatcatcacatcaagaccttcagcagctaacagaaacagaaaaggggaaagaggatccccttgacgaagtcctctttcaaaatgaaactcatcggttg |
107 |
Q |
| |
|
|||||||| |||| ||| ||||| || ||||||| ||||| ||| |||||||||||||||||||| || || ||||| || |||||||||||||| || | |
|
|
| T |
20872373 |
gacatcataacatgaaggccttctgctgctaacaaaaacaaaaatggggaaagaggatccccttgccggagacctctctcgaaatgaaactcatccgtcg |
20872274 |
T |
 |
| Q |
108 |
gacaaccattcactaacacagatgctgtagcagtggtaacacactccataatccaa |
163 |
Q |
| |
|
| || ||||| |||| ||| || || || || || |||||||| ||||| |||||| |
|
|
| T |
20872273 |
ggcacccattaactagcacggaagcggttgccgttgtaacacattccattatccaa |
20872218 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 75
Target Start/End: Original strand, 24820494 - 24820559
Alignment:
| Q |
10 |
catcatcacatcaagaccttcagcagctaacagaaacagaaaaggggaaagaggatccccttgacg |
75 |
Q |
| |
|
||||||||||| ||| |||||||| |||| |||||||||||| ||||||||||||||||||||||| |
|
|
| T |
24820494 |
catcatcacattaaggccttcagccgctagcagaaacagaaacggggaaagaggatccccttgacg |
24820559 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 102
Target Start/End: Original strand, 18768706 - 18768782
Alignment:
| Q |
26 |
ccttcagcagctaacagaaacagaaaaggggaaagaggatccccttgacgaagtcctctttcaaaatgaaactcatc |
102 |
Q |
| |
|
|||||||| |||| || ||||| ||||||||| ||||||||||| ||||| | ||||| | ||||||||||||||| |
|
|
| T |
18768706 |
ccttcagccgctagcaaaaacaaaaaaggggacagaggatccccctgacgtaaacctctctgaaaatgaaactcatc |
18768782 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 173; Significance: 4e-93; HSPs: 11)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 8 - 248
Target Start/End: Complemental strand, 17152646 - 17152406
Alignment:
| Q |
8 |
gacatcatcacatcaagaccttcagcagctaacagaaacagaaaaggggaaagaggatccccttgacgaagtcctctttcaaaatgaaactcatcggttg |
107 |
Q |
| |
|
||||||||||||| ||| |||||||||||||| | |||||||||||||||||| |||||||||||| | ||||||||||||||||||||||||||||| | |
|
|
| T |
17152646 |
gacatcatcacattaaggccttcagcagctaatacaaacagaaaaggggaaaggggatccccttgaaggagtcctctttcaaaatgaaactcatcggtcg |
17152547 |
T |
 |
| Q |
108 |
gacaaccattcactaacacagatgctgtagcagtggtaacacactccataatccaacaacgccacttagacggaaaattcattttaatcatcacctcatc |
207 |
Q |
| |
|
||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||||||||||||||| ||||||||| |
|
|
| T |
17152546 |
gacaaccattcactaacactgatgctgtagcagttgtaacacactccataatccaagaacgccacttaggcggaaaattcattttaatcaacacctcatc |
17152447 |
T |
 |
| Q |
208 |
taagtaacaccaatccaccgagtcataagccttttcaaaat |
248 |
Q |
| |
|
|||||| | |||||||||||| ||||| ||||||||||||| |
|
|
| T |
17152446 |
taagtatccccaatccaccgaatcatacgccttttcaaaat |
17152406 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 10 - 248
Target Start/End: Original strand, 3516072 - 3516310
Alignment:
| Q |
10 |
catcatcacatcaagaccttcagcagctaacagaaacagaaaaggggaaagaggatccccttgacgaagtcctctttcaaaatgaaactcatcggttgga |
109 |
Q |
| |
|
||||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || ||| |
|
|
| T |
3516072 |
catcatcacattaaggccttcagcagctaacagaaacagaaacggggaaagaggatccccttgacgaagtcctctttcaaaatgaaactcatcagtcgga |
3516171 |
T |
 |
| Q |
110 |
caaccattcactaacacagatgctgtagcagtggtaacacactccataatccaacaacgccacttagacggaaaattcattttaatcatcacctcatcta |
209 |
Q |
| |
|
|| |||||||||| |||||| |||||||| || ||||| ||||||||||||||| ||||||||||| |||||||| ||||||| || ||||||||||| |
|
|
| T |
3516172 |
cagccattcactagcacagaagctgtagccgttgtaacgcactccataatccaagaacgccacttatacggaaaacacattttacccaacacctcatcta |
3516271 |
T |
 |
| Q |
210 |
agtaacaccaatccaccgagtcataagccttttcaaaat |
248 |
Q |
| |
|
|||| | ||| |||||||| ||||| ||||||||||||| |
|
|
| T |
3516272 |
agtacctccagtccaccgaatcatatgccttttcaaaat |
3516310 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 8 - 164
Target Start/End: Original strand, 9820446 - 9820602
Alignment:
| Q |
8 |
gacatcatcacatcaagaccttcagcagctaacagaaacagaaaaggggaaagaggatccccttgacgaagtcctctttcaaaatgaaactcatcggttg |
107 |
Q |
| |
|
||||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| | |
|
|
| T |
9820446 |
gacatcatcacatcaaggccttcagcagctaacacaaacaaaaaaggggaaagaggatccccttgacggagttctctttcaaaatgaaactcatcggtcg |
9820545 |
T |
 |
| Q |
108 |
gacaaccattcactaacacagatgctgtagcagtggtaacacactccataatccaac |
164 |
Q |
| |
|
||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||| |
|
|
| T |
9820546 |
gacaaccattcactaacactgatgctgttgcagttgtaacacactccataatccaac |
9820602 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 88 - 248
Target Start/End: Complemental strand, 9827472 - 9827312
Alignment:
| Q |
88 |
aaaatgaaactcatcggttggacaaccattcactaacacagatgctgtagcagtggtaacacactccataatccaacaacgccacttagacggaaaattc |
187 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||||||| ||||||||| |
|
|
| T |
9827472 |
aaaatgaaactcatcggtcagacaaccattcactaacactgatgctgtagcagttgtaacacactccataatccaaccacgccacttagttggaaaattc |
9827373 |
T |
 |
| Q |
188 |
attttaatcatcacctcatctaagtaacaccaatccaccgagtcataagccttttcaaaat |
248 |
Q |
| |
|
|||||||| ||||||||||||||||||| |||||||||||||||||| ||||||||||||| |
|
|
| T |
9827372 |
attttaattatcacctcatctaagtaaccccaatccaccgagtcatacgccttttcaaaat |
9827312 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 8 - 248
Target Start/End: Original strand, 8596643 - 8596883
Alignment:
| Q |
8 |
gacatcatcacatcaagaccttcagcagctaacagaaacagaaaaggggaaagaggatccccttgacgaagtcctctttcaaaatgaaactcatcggttg |
107 |
Q |
| |
|
|||||||| |||| ||||||||| || ||||||| |||| ||| |||||||||||||||||||||||||| ||||| |||||||| |||||||| || | |
|
|
| T |
8596643 |
gacatcattacattaagaccttctgctgctaacaagaacaaaaacggggaaagaggatccccttgacgaaggcctctctcaaaatggaactcatctgtcg |
8596742 |
T |
 |
| Q |
108 |
gacaaccattcactaacacagatgctgtagcagtggtaacacactccataatccaacaacgccacttagacggaaaattcattttaatcatcacctcatc |
207 |
Q |
| |
|
|||||||||| ||||| || |||| ||||| || ||||||||||||||||||||| | |||||| |||||||||||||||||||||||||||||| |
|
|
| T |
8596743 |
gacaaccattaactaaaactgatgtcgtagccgttgtaacacactccataatccaagagcgccacaattgcggaaaattcattttaatcatcacctcatc |
8596842 |
T |
 |
| Q |
208 |
taagtaacaccaatccaccgagtcataagccttttcaaaat |
248 |
Q |
| |
|
||| |||| |||||| || || ||||| || |||||||||| |
|
|
| T |
8596843 |
taaataactccaatcaacggaatcatatgctttttcaaaat |
8596883 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 62 - 246
Target Start/End: Original strand, 23823152 - 23823336
Alignment:
| Q |
62 |
ggatccccttgacgaagtcctctttcaaaatgaaactcatcggttggacaaccattcactaacacagatgctgtagcagtggtaacacactccataatcc |
161 |
Q |
| |
|
||||||||||| ||||| |||||||||||||| || || || || ||||||||||| ||||| ||||||| || || || || |||||||||||||||| |
|
|
| T |
23823152 |
ggatccccttggcgaaggcctctttcaaaatggaattcgtctgtcggacaaccatttactaaaacagatgtcgttgccgttgtgacacactccataatcc |
23823251 |
T |
 |
| Q |
162 |
aacaacgccacttagacggaaaattcattttaatcatcacctcatctaagtaacaccaatccaccgagtcataagccttttcaaa |
246 |
Q |
| |
|
|| | |||||| ||||||||||||||||||||||||||| || ||||| | ||||||||| ||||||||||| |||||||| |
|
|
| T |
23823252 |
aagagcgccacaggtgcggaaaattcattttaatcatcacctcttccaagtacctccaatccacggagtcataagctttttcaaa |
23823336 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 8 - 248
Target Start/End: Original strand, 16665364 - 16665605
Alignment:
| Q |
8 |
gacatcatcacatcaagaccttcagcagctaacagaaacagaaaaggg-gaaagaggatccccttgacgaagtcctctttcaaaatgaaactcatcggtt |
106 |
Q |
| |
|
||||||||||||| | |||||| || ||||| || ||| |||| || ||||| |||||||||||||| || || ||||||| || ||||||||| || |
|
|
| T |
16665364 |
gacatcatcacatttaaaccttctgctgctaaaaggaaccaaaaatggagaaagcggatccccttgacggagacccctttcaagattaaactcatcagtc |
16665463 |
T |
 |
| Q |
107 |
ggacaaccattcactaacacagatgctgtagcagtggtaacacactccataatccaacaacgccacttagacggaaaattcattttaatcatcacctcat |
206 |
Q |
| |
|
|| || ||||| |||||||||||||| | || | |||| |||||||||||||||| | ||||| | ||||||||||||| |||||||| ||||| | |
|
|
| T |
16665464 |
gggcacccattaactaacacagatgccatcgccattgtaatacactccataatccaagaccgccaaacacacggaaaattcatcttaatcataacctcgt |
16665563 |
T |
 |
| Q |
207 |
ctaagtaacaccaatccaccgagtcataagccttttcaaaat |
248 |
Q |
| |
|
| | ||| | |||||| || || |||||||| |||||||||| |
|
|
| T |
16665564 |
caatgtagccccaatcaacagaatcataagctttttcaaaat |
16665605 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 10 - 162
Target Start/End: Original strand, 10755451 - 10755603
Alignment:
| Q |
10 |
catcatcacatcaagaccttcagcagctaacagaaacagaaaaggggaaagaggatccccttgacgaagtcctctttcaaaatgaaactcatcggttgga |
109 |
Q |
| |
|
||||||||||| ||||||||||| ||||| || |||| ||| || ||||| ||||||||||| || || || ||||||| | ||||||||| || ||| |
|
|
| T |
10755451 |
catcatcacattgagaccttcagctgctaaaaggaacaaaaacggtgaaagcggatccccttgccggagacccctttcaagagtaaactcatctgtcgga |
10755550 |
T |
 |
| Q |
110 |
caaccattcactaacacagatgctgtagcagtggtaacacactccataatcca |
162 |
Q |
| |
|
|| ||||| |||||||| |||| || || || |||| ||||||||||||||| |
|
|
| T |
10755551 |
cacccattaactaacactgatgtcgttgccgttgtaatacactccataatcca |
10755603 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 8 - 163
Target Start/End: Original strand, 30737907 - 30738062
Alignment:
| Q |
8 |
gacatcatcacatcaagaccttcagcagctaacagaaacagaaaaggggaaagaggatccccttgacgaagtcctctttcaaaatgaaactcatcggttg |
107 |
Q |
| |
|
||||||||||||| ||| ||||| |||||||||| ||||| ||| || ||||||||||||| | |||| || ||||| ||||| | ||||||||| | | |
|
|
| T |
30737907 |
gacatcatcacattaaggccttcggcagctaacaaaaacaaaaacggagaaagaggatcccttggacggagacctctctcaaagttaaactcatcaatcg |
30738006 |
T |
 |
| Q |
108 |
gacaaccattcactaacacagatgctgtagcagtggtaacacactccataatccaa |
163 |
Q |
| |
|
|||| ||||| |||||||| | || || || ||||||||||||||||||||| |
|
|
| T |
30738007 |
gacatccattaactaacactaccgtcgttgccgttgtaacacactccataatccaa |
30738062 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 215 - 247
Target Start/End: Original strand, 42449687 - 42449719
Alignment:
| Q |
215 |
caccaatccaccgagtcataagccttttcaaaa |
247 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |
|
|
| T |
42449687 |
caccaatccaccgagtcataagccttttcaaaa |
42449719 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 89
Target Start/End: Original strand, 21309490 - 21309536
Alignment:
| Q |
43 |
aaacagaaaaggggaaagaggatccccttgacgaagtcctctttcaa |
89 |
Q |
| |
|
||||| |||||| ||||||||||| |||||||||| ||||||||||| |
|
|
| T |
21309490 |
aaacaaaaaaggagaaagaggatcaccttgacgaaatcctctttcaa |
21309536 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 143; Significance: 3e-75; HSPs: 5)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 10 - 248
Target Start/End: Complemental strand, 18294229 - 18293991
Alignment:
| Q |
10 |
catcatcacatcaagaccttcagcagctaacagaaacagaaaaggggaaagaggatccccttgacgaagtcctctttcaaaatgaaactcatcggttgga |
109 |
Q |
| |
|
|||| |||||| ||| |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| |
|
|
| T |
18294229 |
catcgtcacattaaggccttcagcagctaacaaaaatagaaaaggggaaagaggatccccttgacgaagtcctctttcaaaataaaactcatcagttgga |
18294130 |
T |
 |
| Q |
110 |
caaccattcactaacacagatgctgtagcagtggtaacacactccataatccaacaacgccacttagacggaaaattcattttaatcatcacctcatcta |
209 |
Q |
| |
|
||||||||||||| |||||| |||||||| || ||||| ||||||||||||||| |||||||| || |||||||| ||||||| |||||||||| ||| |
|
|
| T |
18294129 |
caaccattcactagcacagaagctgtagccgttgtaacgcactccataatccaagaacgccacatacgcggaaaatacattttacccatcacctcaccta |
18294030 |
T |
 |
| Q |
210 |
agtaacaccaatccaccgagtcataagccttttcaaaat |
248 |
Q |
| |
|
|||| | |||||||||||| ||||| ||||||||||||| |
|
|
| T |
18294029 |
agtacctccaatccaccgaatcatacgccttttcaaaat |
18293991 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 8 - 226
Target Start/End: Original strand, 2895589 - 2895807
Alignment:
| Q |
8 |
gacatcatcacatcaagaccttcagcagctaacagaaacagaaaaggggaaagaggatccccttgacgaagtcctctttcaaaatgaaactcatcggttg |
107 |
Q |
| |
|
||||||||||| | ||| |||||||| |||| |||||||||||| || || ||||||||||||||||| |||||||||||||||||||||||||| || | |
|
|
| T |
2895589 |
gacatcatcacgttaaggccttcagccgctagcagaaacagaaacggagatagaggatccccttgacggagtcctctttcaaaatgaaactcatcagtcg |
2895688 |
T |
 |
| Q |
108 |
gacaaccattcactaacacagatgctgtagcagtggtaacacactccataatccaacaacgccacttagacggaaaattcattttaatcatcacctcatc |
207 |
Q |
| |
|
| ||||||||||||| || || ||||||||||| ||||| ||||||||||||||| | | |||| | |||||| ||||||| |||||| ||||| |
|
|
| T |
2895689 |
ggcaaccattcactagtactgaagctgtagcagttgtaacgcactccataatccaagagcaccacagacgcggaaataacattttatccatcacttcatc |
2895788 |
T |
 |
| Q |
208 |
taagtaacaccaatccacc |
226 |
Q |
| |
|
|||||| | |||||||||| |
|
|
| T |
2895789 |
taagtacctccaatccacc |
2895807 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 8 - 248
Target Start/End: Complemental strand, 5390353 - 5390113
Alignment:
| Q |
8 |
gacatcatcacatcaagaccttcagcagctaacagaaacagaaaaggggaaagaggatccccttgacgaagtcctctttcaaaatgaaactcatcggttg |
107 |
Q |
| |
|
||||||||||||| | |||||| |||||||| || |||| ||| || ||||| |||||||||||||| || || ||||||| |||||||| || | |
|
|
| T |
5390353 |
gacatcatcacatttaaaccttctgcagctaataggaacaaaaacggagaaagcggatccccttgacggaggcccctttcaaggataaactcattagtcg |
5390254 |
T |
 |
| Q |
108 |
gacaaccattcactaacacagatgctgtagcagtggtaacacactccataatccaacaacgccacttagacggaaaattcattttaatcatcacctcatc |
207 |
Q |
| |
|
| || ||||| |||||||||||||| || || || || | |||||||||||||||| | ||| | | || ||||||||| |||||||| |||||||| |
|
|
| T |
5390253 |
ggcacccattaactaacacagatgccgttgccgttgttatacactccataatccaagaccgctaaacacacaaaaaattcatcttaatcataacctcatc |
5390154 |
T |
 |
| Q |
208 |
taagtaacaccaatccaccgagtcataagccttttcaaaat |
248 |
Q |
| |
|
| |||| |||||| || || |||||||| |||||||||| |
|
|
| T |
5390153 |
aatataaccccaatcaacagaatcataagctttttcaaaat |
5390113 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 102
Target Start/End: Complemental strand, 12150317 - 12150240
Alignment:
| Q |
25 |
accttcagcagctaacagaaacagaaaaggggaaagaggatccccttgacgaagtcctctttcaaaatgaaactcatc |
102 |
Q |
| |
|
||||||| ||||||| ||||| |||||| | ||||||||||| ||||||||||| ||||| || ||| ||||||||| |
|
|
| T |
12150317 |
accttcaacagctaatagaaaaagaaaacgagaaagaggatcaccttgacgaagccctctctccaaaataaactcatc |
12150240 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 205 - 246
Target Start/End: Original strand, 15675314 - 15675355
Alignment:
| Q |
205 |
atctaagtaacaccaatccaccgagtcataagccttttcaaa |
246 |
Q |
| |
|
||||||||||| ||| |||||||| ||||||||||||||||| |
|
|
| T |
15675314 |
atctaagtaaccccagtccaccgaatcataagccttttcaaa |
15675355 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 113; Significance: 2e-57; HSPs: 6)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 8 - 248
Target Start/End: Original strand, 49371153 - 49371393
Alignment:
| Q |
8 |
gacatcatcacatcaagaccttcagcagctaacagaaacagaaaaggggaaagaggatccccttgacgaagtcctctttcaaaatgaaactcatcggttg |
107 |
Q |
| |
|
|||||||| |||| |||||||||| ||||||||| ||||| ||| ||| ||||||||||||||||||| || ||||| |||||||| |||||||| || | |
|
|
| T |
49371153 |
gacatcattacattaagaccttcaacagctaacaaaaacaaaaacgggaaaagaggatccccttgacggaggcctctctcaaaatggaactcatctgtcg |
49371252 |
T |
 |
| Q |
108 |
gacaaccattcactaacacagatgctgtagcagtggtaacacactccataatccaacaacgccacttagacggaaaattcattttaatcatcacctcatc |
207 |
Q |
| |
|
|||||||||| ||||| || ||||| ||||| | ||||||||||||||||||||| | |||||| | |||||||||||||||||||||||||||||| |
|
|
| T |
49371253 |
gacaaccatttactaaaactgatgccgtagccgctgtaacacactccataatccaagagcgccacagatgcggaaaattcattttaatcatcacctcatc |
49371352 |
T |
 |
| Q |
208 |
taagtaacaccaatccaccgagtcataagccttttcaaaat |
248 |
Q |
| |
|
|||||| | ||||||||| || ||||| || |||||||||| |
|
|
| T |
49371353 |
taagtacctccaatccacggaatcatatgctttttcaaaat |
49371393 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 50 - 248
Target Start/End: Original strand, 48711422 - 48711620
Alignment:
| Q |
50 |
aaaggggaaagaggatccccttgacgaagtcctctttcaaaatgaaactcatcggttggacaaccattcactaacacagatgctgtagcagtggtaacac |
149 |
Q |
| |
|
|||||||| | ||| ||||||| ||| | |||||||||||| ||||||||| || ||||| ||||| || || || || ||||| || || || |||| |
|
|
| T |
48711422 |
aaaggggagatagggtccccttaacgcaagcctctttcaaaacaaaactcatctgtcggacacccatttaccaagactgaagctgttgctgtcgttacac |
48711521 |
T |
 |
| Q |
150 |
actccataatccaacaacgccacttagacggaaaattcattttaatcatcacctcatctaagtaacaccaatccaccgagtcataagccttttcaaaat |
248 |
Q |
| |
|
||||||||||||| |||||| ||||||||||||||||| |||||| ||||| | || | |||||||||||||||||| ||||| ||||||| |
|
|
| T |
48711522 |
actccataatccaggcacgccataataacggaaaattcattttagacatcacttcatcaagatacccccaatccaccgagtcatatgccttctcaaaat |
48711620 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 179 - 246
Target Start/End: Original strand, 52207138 - 52207205
Alignment:
| Q |
179 |
ggaaaattcattttaatcatcacctcatctaagtaacaccaatccaccgagtcataagccttttcaaa |
246 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||| | ||| |||||| || || ||||||||||| |
|
|
| T |
52207138 |
ggaaaattcattttaatcatcacatcatctaagtacttctaattcaccgaatcgtatgccttttcaaa |
52207205 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 135
Target Start/End: Original strand, 39431604 - 39431698
Alignment:
| Q |
41 |
agaaacagaaaaggggaaagaggatccccttgacgaagtcctctttcaaaatgaaactcatcggttggacaaccattcactaacacagatgctgt |
135 |
Q |
| |
|
||||||||||||||||| ||||| ||||| ||||| ||||| |||| || |||| |||||| | |||| ||| ||||||| |||||| ||||| |
|
|
| T |
39431604 |
agaaacagaaaaggggacagagggtccccctgacggagtccccttttaagtggaaattcatcgataggactaccgttcactagcacagaagctgt |
39431698 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 217 - 246
Target Start/End: Complemental strand, 7953226 - 7953197
Alignment:
| Q |
217 |
ccaatccaccgagtcataagccttttcaaa |
246 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
7953226 |
ccaatccaccgagtcataagccttttcaaa |
7953197 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 39431758 - 39431811
Alignment:
| Q |
195 |
tcatcacctcatctaagtaacaccaatccaccgagtcataagccttttcaaaat |
248 |
Q |
| |
|
|||| |||||||| | ||||| |||||| || |||||||||||||||||||||| |
|
|
| T |
39431758 |
tcataacctcatcaaggtaaccccaatcaacagagtcataagccttttcaaaat |
39431811 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 99; Significance: 6e-49; HSPs: 6)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 8 - 118
Target Start/End: Complemental strand, 6677430 - 6677320
Alignment:
| Q |
8 |
gacatcatcacatcaagaccttcagcagctaacagaaacagaaaaggggaaagaggatccccttgacgaagtcctctttcaaaatgaaactcatcggttg |
107 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | |
|
|
| T |
6677430 |
gacatcatcacatcaagaccttcagcagctaacagaaacagaaaaggggaaagaggatccccttgacgtagtcctctttcaaaatgaaactcatcggtcg |
6677331 |
T |
 |
| Q |
108 |
gacaaccattc |
118 |
Q |
| |
|
| ||||||||| |
|
|
| T |
6677330 |
ggcaaccattc |
6677320 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 8 - 185
Target Start/End: Original strand, 11267411 - 11267588
Alignment:
| Q |
8 |
gacatcatcacatcaagaccttcagcagctaacagaaacagaaaaggggaaagaggatccccttgacgaagtcctctttcaaaatgaaactcatcggttg |
107 |
Q |
| |
|
|||||||| |||| ||||||||| |||||||||||||||| ||| ||||| ||||| |||||||| || |||||||| ||||||||||||||||| || | |
|
|
| T |
11267411 |
gacatcataacattaagaccttccgcagctaacagaaacaaaaatggggagagagggtccccttggcggagtcctctctcaaaatgaaactcatcagtcg |
11267510 |
T |
 |
| Q |
108 |
gacaaccattcactaacacagatgctgtagcagtggtaacacactccataatccaacaacgccacttagacggaaaat |
185 |
Q |
| |
|
|||||||||| |||| ||| |||| ||||| || |||||||| |||||||||||| | ||| || ||||||||||| |
|
|
| T |
11267511 |
gacaaccatttactagcactgatgtcgtagctgttgtaacacattccataatccaagagcgcaacaaagacggaaaat |
11267588 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 8 - 248
Target Start/End: Original strand, 29326584 - 29326824
Alignment:
| Q |
8 |
gacatcatcacatcaagaccttcagcagctaacagaaacagaaaaggggaaagaggatccccttgacgaagtcctctttcaaaatgaaactcatcggttg |
107 |
Q |
| |
|
||||||||||||| ||||||||| ||||| || |||| ||| || ||||| |||||||||||||| || || ||||| | || ||||||||| || | |
|
|
| T |
29326584 |
gacatcatcacatttgaaccttcagctgctaaaaggaacaaaaacggagaaagcggatccccttgacggagacccctttcgagattaaactcatcagtcg |
29326683 |
T |
 |
| Q |
108 |
gacaaccattcactaacacagatgctgtagcagtggtaacacactccataatccaacaacgccacttagacggaaaattcattttaatcatcacctcatc |
207 |
Q |
| |
|
|||| ||||| ||||||||| |||| || || || |||| ||| |||||||||||| | ||||| | ||||||||||||| |||||||| |||||||| |
|
|
| T |
29326684 |
gacacccattaactaacacaaatgccgtcgccgtagtaatacattccataatccaagaccgccaaacacacggaaaattcatcttaatcataacctcatc |
29326783 |
T |
 |
| Q |
208 |
taagtaacaccaatccaccgagtcataagccttttcaaaat |
248 |
Q |
| |
|
| ||| | |||||| || || |||||||| |||||||||| |
|
|
| T |
29326784 |
aatgtagccccaatcaacagaatcataagctttttcaaaat |
29326824 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 38 - 248
Target Start/End: Complemental strand, 22112963 - 22112754
Alignment:
| Q |
38 |
aacagaaacagaaaaggggaaagaggatccccttgacgaagtcctctttcaaaatgaaactcatcggttggacaaccattcactaacacagatgctgtag |
137 |
Q |
| |
|
|||||||||| ||||||||| ||||| ||||||||||| | |||||||||||| |||||| || || ||||| ||||| || ||||| || | ||| | |
|
|
| T |
22112963 |
aacagaaacaaaaaaggggagagagggtccccttgacgcaagcctctttcaaaacaaaactcgtctgtcggacacccatttaccaacactgaagttgttg |
22112864 |
T |
 |
| Q |
138 |
cagtggtaacacactccataatccaacaacgccacttagacggaaaattcattttaatcatcacctcatctaagtaacaccaatccaccgagtcataagc |
237 |
Q |
| |
|
| || || || |||||||||||||| ||||||| | | | | |||||||||||| |||||| ||||| | ||| | ||||||||||||||| || || |
|
|
| T |
22112863 |
ctgtcgttacgcactccataatccaggaacgcca-taatatcggaaattcattttagacatcacttcatcaaggtacccccaatccaccgagtcgtatgc |
22112765 |
T |
 |
| Q |
238 |
cttttcaaaat |
248 |
Q |
| |
|
||| ||||||| |
|
|
| T |
22112764 |
cttctcaaaat |
22112754 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 78
Target Start/End: Complemental strand, 41767739 - 41767686
Alignment:
| Q |
25 |
accttcagcagctaacagaaacagaaaaggggaaagaggatccccttgacgaag |
78 |
Q |
| |
|
||||||||| || |||||||| | ||||||||| ||||| |||||||||||||| |
|
|
| T |
41767739 |
accttcagctgccaacagaaataaaaaaggggagagagggtccccttgacgaag |
41767686 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 102
Target Start/End: Original strand, 38358770 - 38358846
Alignment:
| Q |
26 |
ccttcagcagctaacagaaacagaaaaggggaaagaggatccccttgacgaagtcctctttcaaaatgaaactcatc |
102 |
Q |
| |
|
|||||||| |||| || ||||| ||| ||||| ||||||||||| ||||| | ||||| | ||||||||||||||| |
|
|
| T |
38358770 |
ccttcagccgctagcaaaaacaaaaagggggacagaggatccccctgacgtaaacctctctgaaaatgaaactcatc |
38358846 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0003 (Bit Score: 82; Significance: 8e-39; HSPs: 1)
Name: scaffold0003
Description:
Target: scaffold0003; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 8 - 237
Target Start/End: Complemental strand, 223564 - 223335
Alignment:
| Q |
8 |
gacatcatcacatcaagaccttcagcagctaacagaaacagaaaaggggaaagaggatccccttgacgaagtcctctttcaaaatgaaactcatcggttg |
107 |
Q |
| |
|
||||||||||||| || ||||||||||||||||||||||| ||| || ||||||||||||||||||||||| ||||| |||| | ||||||||| || | |
|
|
| T |
223564 |
gacatcatcacatgaaaaccttcagcagctaacagaaacaaaaacggagaaagaggatccccttgacgaaggcctctctcaagcttaaactcatcagtag |
223465 |
T |
 |
| Q |
108 |
gacaaccattcactaacacagatgctgtagcagtggtaacacactccataatccaacaacgccacttagacggaaaattcattttaatcatcacctcatc |
207 |
Q |
| |
|
|||| ||||| |||||||| || | | || || || |||||||||||||||||| | ||||| | |||||||||||||||| ||||||||| || |
|
|
| T |
223464 |
gacatccattgactaacactgaagtcatggccgttgtgacacactccataatccaagatcgccataaacgtggaaaattcattttaaccatcacctcctc |
223365 |
T |
 |
| Q |
208 |
taagtaacaccaatccaccgagtcataagc |
237 |
Q |
| |
|
|||||||| |||||| || || |||||||| |
|
|
| T |
223364 |
taagtaaccccaatcaactgaatcataagc |
223335 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0032 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0032
Description:
Target: scaffold0032; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 9 - 248
Target Start/End: Complemental strand, 57236 - 56997
Alignment:
| Q |
9 |
acatcatcacatcaagaccttcagcagctaacagaaacagaaaaggggaaagaggatccccttgacgaagtcctctttcaaaatgaaactcatcggttgg |
108 |
Q |
| |
|
|||||||||||| |||||||||| ||||||||| ||||| ||| || |||||||| ||||||||||| || ||||| ||||||||||||||||| || || |
|
|
| T |
57236 |
acatcatcacattaagaccttcaacagctaacaaaaacaaaaacggagaaagagggtccccttgacggaggcctctctcaaaatgaaactcatcagtcgg |
57137 |
T |
 |
| Q |
109 |
acaaccattcactaacacagatgctgtagcagtggtaacacactccataatccaacaacgccacttagacggaaaattcattttaatcatcacctcatct |
208 |
Q |
| |
|
|||||||| |||||||| |||| ||||| | |||||||||||||||||| || | |||| | | |||||||||||||| ||| ||||||||| |
|
|
| T |
57136 |
gcaaccatttactaacactgatgtcgtagccattgtaacacactccataatcgaagtgcaccacagacgcagaaaattcattttagccattacctcatct |
57037 |
T |
 |
| Q |
209 |
aagtaacaccaatccaccgagtcataagccttttcaaaat |
248 |
Q |
| |
|
| ||| | ||||||||| || ||||| || |||||||||| |
|
|
| T |
57036 |
aggtatctccaatccacggaatcatacgctttttcaaaat |
56997 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 69; Significance: 4e-31; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 8 - 248
Target Start/End: Complemental strand, 10800516 - 10800276
Alignment:
| Q |
8 |
gacatcatcacatcaagaccttcagcagctaacagaaacagaaaaggggaaagaggatccccttgacgaagtcctctttcaaaatgaaactcatcggttg |
107 |
Q |
| |
|
||||||||||||| | ||||||||| ||||| || |||| ||| || ||||| |||||||||||||| || || ||||| | || ||||||||| || | |
|
|
| T |
10800516 |
gacatcatcacatttaaaccttcagctgctaaaaggaacaaaaacggagaaagcggatccccttgacggagacccctttcgagattaaactcatcagtcg |
10800417 |
T |
 |
| Q |
108 |
gacaaccattcactaacacagatgctgtagcagtggtaacacactccataatccaacaacgccacttagacggaaaattcattttaatcatcacctcatc |
207 |
Q |
| |
|
|||| ||||| ||||||||||||| || || || |||| ||| |||||||||||| | ||| | | ||||||||||||| |||||||| |||||||| |
|
|
| T |
10800416 |
gacacccattaactaacacagatgtcgtcgccgttgtaatacattccataatccaagaccgctaaacacacggaaaattcatcttaatcataacctcatc |
10800317 |
T |
 |
| Q |
208 |
taagtaacaccaatccaccgagtcataagccttttcaaaat |
248 |
Q |
| |
|
| ||||| |||||| || || |||||||| |||||||||| |
|
|
| T |
10800316 |
aatgtaaccccaatcaacagaatcataagctttttcaaaat |
10800276 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 123
Target Start/End: Original strand, 36493693 - 36493781
Alignment:
| Q |
35 |
gctaacagaaacagaaaaggggaaagaggatccccttgacgaagtcctctttcaaaatgaaactcatcggttggacaaccattcactaa |
123 |
Q |
| |
|
||||||||||| |||||||||||||||||||| ||||| || | || || || ||| |||||||||| ||||| | |||||| ||||| |
|
|
| T |
36493693 |
gctaacagaaaaagaaaaggggaaagaggatcaccttggcgtaaccccctctctaaaggaaactcatcagttgggctaccattaactaa |
36493781 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 205 - 246
Target Start/End: Complemental strand, 16374761 - 16374720
Alignment:
| Q |
205 |
atctaagtaacaccaatccaccgagtcataagccttttcaaa |
246 |
Q |
| |
|
||||||||||| |||||||||||| ||||||| ||||||||| |
|
|
| T |
16374761 |
atctaagtaaccccaatccaccgaatcataagtcttttcaaa |
16374720 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0121 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0121
Description:
Target: scaffold0121; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 8 - 246
Target Start/End: Original strand, 32926 - 33164
Alignment:
| Q |
8 |
gacatcatcacatcaagaccttcagcagctaacagaaacagaaaaggggaaagaggatccccttgacgaagtcctctttcaaaatgaaactcatcggttg |
107 |
Q |
| |
|
|||||||| |||| |||||| || || || || |||||||| ||||| || |||||||||||||||||||| | ||| | |||| |||||||| || | |
|
|
| T |
32926 |
gacatcataacattaagaccctccgccgccaagagaaacaggaaaggagagagaggatccccttgacgaagacttctctaaaaaaaaaactcatttgtcg |
33025 |
T |
 |
| Q |
108 |
gacaaccattcactaacacagatgctgtagcagtggtaacacactccataatccaacaacgccacttaga-cggaaaattcattttaatcatcacctcat |
206 |
Q |
| |
|
| | ||||| || ||||| || | ||| | || || |||||||||||||||||| | ||||| | | | |||||||||||||||| ||||||||||| |
|
|
| T |
33026 |
ggctcccattaaccaacaccgaagttgttgttgtcgtgacacactccataatccaagagcgcca-taacaccggaaaattcattttagacatcacctcat |
33124 |
T |
 |
| Q |
207 |
ctaagtaacaccaatccaccgagtcataagccttttcaaa |
246 |
Q |
| |
|
| | ||||| ||||||||| | ||||| ||||| ||||| |
|
|
| T |
33125 |
caaggtaaccccaatccacataatcatacgccttctcaaa |
33164 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0746 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0746
Description:
Target: scaffold0746; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 72
Target Start/End: Complemental strand, 1787 - 1747
Alignment:
| Q |
32 |
gcagctaacagaaacagaaaaggggaaagaggatccccttg |
72 |
Q |
| |
|
|||||||||||||| ||||||||||| |||||||| ||||| |
|
|
| T |
1787 |
gcagctaacagaaaaagaaaaggggagagaggatctccttg |
1747 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0070 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0070
Description:
Target: scaffold0070; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 72
Target Start/End: Original strand, 27415 - 27455
Alignment:
| Q |
32 |
gcagctaacagaaacagaaaaggggaaagaggatccccttg |
72 |
Q |
| |
|
|||||||||||||| ||||||||||| |||||||| ||||| |
|
|
| T |
27415 |
gcagctaacagaaaaagaaaaggggagagaggatctccttg |
27455 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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