View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6494_high_19 (Length: 209)
Name: NF6494_high_19
Description: NF6494
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6494_high_19 |
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Alignment Details
Target: chr7 (Bit Score: 155; Significance: 2e-82; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 29 - 195
Target Start/End: Complemental strand, 31457064 - 31456898
Alignment:
| Q |
29 |
cccacctcaaatcacttacaaccgtcttaacactcattatcttcctttaagactatgaaatgatatgataatgtctatgattaaaatatttttagttttg |
128 |
Q |
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| T |
31457064 |
cccacctcaaatcacttacaaccgtcttaacactctttagcttcctttaagacaatgaaatgatatgataatgtctatgattaaaatatttttagttttg |
31456965 |
T |
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| Q |
129 |
aaaatgttaaaatacaatgaaaaggaactgaatatttttaagccctccaatactctcatctaacata |
195 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31456964 |
aaaatgttaaaatacaatgaaaaggaactgaatatttttaagccctccaatactctcatctaacata |
31456898 |
T |
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