View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6495_high_1 (Length: 264)
Name: NF6495_high_1
Description: NF6495
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6495_high_1 |
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Alignment Details
Target: chr7 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 18 - 254
Target Start/End: Complemental strand, 38878868 - 38878632
Alignment:
| Q |
18 |
atctataccatgaaataaaatacatgctcatatcaaatttataactccacacttggccgctgcgttgaatcccatttttcgataactgtgagcgccgaac |
117 |
Q |
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| T |
38878868 |
atctataccgtgaaataaaatacatgctcatatcaaatttataactccacactcggccgcggcgttgaatcccatttttcgataactgtgagcgccgaac |
38878769 |
T |
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| Q |
118 |
cgcaaactaactccagttttttagacttgtctcgtcaatcatcttctctttgagtttcacaaagtttgtttcaataattttaattaacgtgatgttgagt |
217 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38878768 |
cgcaaactaactccagttttttagacttgtctcgtcaatcatcttctctttcagtttcacaaagtttgtttcaataattttaattaacgtgatgttgagt |
38878669 |
T |
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| Q |
218 |
tacttgctaacggatttgctgcttgattgcgcctttg |
254 |
Q |
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||||||||||||||||||||||||||||||||||||| |
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| T |
38878668 |
tacttgctaacggatttgctgcttgattgcgcctttg |
38878632 |
T |
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