View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6497_low_10 (Length: 315)
Name: NF6497_low_10
Description: NF6497
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6497_low_10 |
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Alignment Details
Target: chr1 (Bit Score: 269; Significance: 1e-150; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 5 - 305
Target Start/End: Complemental strand, 40551014 - 40550715
Alignment:
| Q |
5 |
tgttgtaggcacctttctggttaacttatgacttcccaccaaaagtcagggagagattaaatcttcagtggggaactgattggaaggggcaggcgcaaaa |
104 |
Q |
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| T |
40551014 |
tgttgtaggcacctttctggttaacttatgacttcccaccaaaagtcagggagagattaaatcttcagtggggaactgattggaaggggcaggcgcaaaa |
40550915 |
T |
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| Q |
105 |
atggtaatcatttaaatatgctcagtctagaggaaataaaactcataaaaacagcacaaccaaattatataatgtgaaatcagtataattgtgtacacat |
204 |
Q |
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| T |
40550914 |
gtggtaatcatttaaatatgctcagtctagaggaaataaaactcataaaaacagcacaactaaattatataatgtgaaatcagtataactgtgtactcat |
40550815 |
T |
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| Q |
205 |
gcagggggaaagggtatttttgttattgcaaaggcataattagggacattttgtttgcaccttccttaataatgttttttacactctgatatacacaggt |
304 |
Q |
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| T |
40550814 |
gcagggggaaagggtatttttgttattgcaaaggcataattagggacatttcgtttgcgccttcc-taataatgttttttacactctgatatacacaggt |
40550716 |
T |
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