View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6499_high_11 (Length: 228)

Name: NF6499_high_11
Description: NF6499
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6499_high_11
NF6499_high_11
[»] chr4 (42 HSPs)
chr4 (12-131)||(50052409-50052528)
chr4 (12-131)||(11511443-11511562)
chr4 (12-131)||(48183030-48183149)
chr4 (12-132)||(41236346-41236466)
chr4 (12-131)||(480428-480547)
chr4 (12-131)||(6034044-6034163)
chr4 (12-131)||(50526152-50526271)
chr4 (12-131)||(29239886-29240005)
chr4 (12-131)||(42044348-42044467)
chr4 (12-136)||(55475186-55475310)
chr4 (12-131)||(24995088-24995207)
chr4 (12-131)||(29234226-29234345)
chr4 (12-131)||(54473514-54473633)
chr4 (12-131)||(3481654-3481773)
chr4 (12-131)||(31910192-31910311)
chr4 (12-132)||(8343144-8343264)
chr4 (12-131)||(19670697-19670816)
chr4 (12-131)||(40574779-40574898)
chr4 (12-131)||(48647707-48647826)
chr4 (12-111)||(17983724-17983823)
chr4 (12-131)||(23608235-23608354)
chr4 (16-131)||(29977885-29978000)
chr4 (12-131)||(32766958-32767077)
chr4 (12-131)||(50813873-50813992)
chr4 (12-131)||(29547940-29548059)
chr4 (12-131)||(47104544-47104663)
chr4 (12-131)||(47986208-47986327)
chr4 (12-126)||(53352547-53352660)
chr4 (12-123)||(28480249-28480360)
chr4 (12-123)||(28481124-28481235)
chr4 (12-123)||(28481999-28482110)
chr4 (12-91)||(56300146-56300225)
chr4 (12-131)||(55079694-55079814)
chr4 (12-93)||(41823920-41824001)
chr4 (19-126)||(18769114-18769221)
chr4 (12-123)||(29589721-29589831)
chr4 (12-131)||(44536727-44536845)
chr4 (12-111)||(18924476-18924575)
chr4 (60-105)||(48463384-48463428)
chr4 (61-105)||(27893776-27893819)
chr4 (61-105)||(31681025-31681068)
chr4 (61-105)||(55966280-55966323)
[»] chr2 (42 HSPs)
chr2 (12-131)||(9058480-9058599)
chr2 (12-128)||(19930801-19930917)
chr2 (12-131)||(33436081-33436200)
chr2 (12-131)||(33436211-33436330)
chr2 (12-128)||(28863458-28863574)
chr2 (12-131)||(13438343-13438462)
chr2 (12-131)||(17473020-17473139)
chr2 (12-131)||(20700815-20700934)
chr2 (12-131)||(30915463-30915582)
chr2 (12-131)||(40701478-40701597)
chr2 (14-131)||(40613885-40614002)
chr2 (16-131)||(10249367-10249482)
chr2 (12-131)||(32505629-32505748)
chr2 (22-131)||(5574479-5574588)
chr2 (14-131)||(42257193-42257310)
chr2 (12-131)||(7465716-7465835)
chr2 (12-131)||(28381636-28381755)
chr2 (12-130)||(41575138-41575257)
chr2 (26-131)||(27864704-27864809)
chr2 (12-131)||(17819985-17820104)
chr2 (12-131)||(26891485-26891604)
chr2 (12-131)||(38273123-38273242)
chr2 (12-131)||(45097716-45097835)
chr2 (12-111)||(2997468-2997567)
chr2 (12-131)||(4060685-4060804)
chr2 (12-131)||(38732354-38732473)
chr2 (12-131)||(43490121-43490240)
chr2 (12-125)||(3439985-3440098)
chr2 (12-131)||(2533124-2533242)
chr2 (12-131)||(36168836-36168955)
chr2 (49-131)||(38882832-38882913)
chr2 (14-88)||(3737986-3738060)
chr2 (12-111)||(13365373-13365472)
chr2 (16-131)||(15428725-15428840)
chr2 (63-131)||(17823784-17823852)
chr2 (12-126)||(44151928-44152046)
chr2 (14-124)||(21301483-21301593)
chr2 (12-77)||(3034964-3035029)
chr2 (16-77)||(3154197-3154258)
chr2 (61-105)||(16096871-16096914)
chr2 (63-123)||(41758593-41758653)
chr2 (61-105)||(42849793-42849836)
[»] chr8 (41 HSPs)
chr8 (12-130)||(5957831-5957949)
chr8 (12-131)||(12831047-12831166)
chr8 (12-131)||(37038479-37038598)
chr8 (12-131)||(40423924-40424043)
chr8 (12-132)||(1179921-1180041)
chr8 (12-140)||(14547913-14548041)
chr8 (12-131)||(4854844-4854963)
chr8 (16-131)||(15197333-15197448)
chr8 (12-131)||(504102-504221)
chr8 (12-131)||(34012277-34012396)
chr8 (12-131)||(23122578-23122697)
chr8 (12-131)||(43414562-43414681)
chr8 (12-131)||(20074923-20075034)
chr8 (12-111)||(8841413-8841512)
chr8 (12-126)||(10621068-10621182)
chr8 (12-131)||(10284612-10284731)
chr8 (12-131)||(15258910-15259029)
chr8 (12-131)||(16383377-16383496)
chr8 (12-131)||(44507068-44507187)
chr8 (27-131)||(15048178-15048281)
chr8 (12-131)||(30479455-30479574)
chr8 (12-131)||(34307216-34307335)
chr8 (12-131)||(16056382-16056501)
chr8 (12-131)||(24307774-24307893)
chr8 (12-131)||(42221515-42221634)
chr8 (12-131)||(17443825-17443944)
chr8 (12-131)||(32032725-32032843)
chr8 (12-130)||(9122196-9122304)
chr8 (12-131)||(38229429-38229547)
chr8 (50-131)||(24307629-24307710)
chr8 (61-105)||(20148883-20148926)
chr8 (12-79)||(42354569-42354636)
chr8 (95-137)||(30183939-30183981)
chr8 (61-102)||(3743894-3743934)
chr8 (61-105)||(2547119-2547162)
chr8 (79-131)||(25838197-25838249)
chr8 (61-105)||(26125757-26125800)
chr8 (61-105)||(29705485-29705528)
chr8 (61-105)||(29800884-29800927)
chr8 (61-105)||(30660676-30660719)
chr8 (12-76)||(40467755-40467819)
[»] chr7 (45 HSPs)
chr7 (12-131)||(8080364-8080483)
chr7 (12-131)||(19329842-19329961)
chr7 (12-131)||(35137533-35137652)
chr7 (12-131)||(38267040-38267159)
chr7 (19-131)||(7389389-7389501)
chr7 (12-140)||(38837208-38837336)
chr7 (12-131)||(35468836-35468955)
chr7 (21-131)||(3434562-3434672)
chr7 (12-128)||(3783998-3784114)
chr7 (12-131)||(4999495-4999614)
chr7 (22-131)||(36361904-36362013)
chr7 (12-136)||(36208168-36208292)
chr7 (16-131)||(19436172-19436287)
chr7 (12-126)||(35522881-35522995)
chr7 (22-131)||(36362026-36362135)
chr7 (12-128)||(3694370-3694486)
chr7 (12-131)||(26296644-26296763)
chr7 (12-131)||(40957707-40957826)
chr7 (12-131)||(46033782-46033901)
chr7 (12-131)||(8238212-8238332)
chr7 (12-131)||(22343361-22343480)
chr7 (12-131)||(32564407-32564526)
chr7 (12-131)||(41915741-41915860)
chr7 (12-130)||(32951474-32951592)
chr7 (37-133)||(46374808-46374904)
chr7 (12-131)||(10343544-10343663)
chr7 (12-131)||(18207180-18207298)
chr7 (12-131)||(40846094-40846213)
chr7 (19-131)||(21234401-21234513)
chr7 (12-131)||(7727906-7728025)
chr7 (16-131)||(38044197-38044312)
chr7 (12-131)||(39255905-39256023)
chr7 (12-131)||(11044188-11044297)
chr7 (12-131)||(31735884-31735996)
chr7 (12-131)||(41423682-41423801)
chr7 (12-126)||(2318224-2318338)
chr7 (12-97)||(27744290-27744375)
chr7 (12-131)||(12310906-12311023)
chr7 (12-101)||(16374805-16374894)
chr7 (61-105)||(44326301-44326344)
chr7 (63-131)||(45223042-45223110)
chr7 (12-45)||(1766762-1766795)
chr7 (60-105)||(26898336-26898380)
chr7 (100-140)||(31741034-31741074)
chr7 (61-105)||(32029751-32029794)
[»] chr3 (45 HSPs)
chr3 (12-131)||(24699935-24700054)
chr3 (12-131)||(53982011-53982130)
chr3 (12-131)||(33644200-33644319)
chr3 (12-132)||(8076392-8076512)
chr3 (12-131)||(14623820-14623939)
chr3 (12-131)||(35536626-35536745)
chr3 (12-131)||(54868876-54868995)
chr3 (16-130)||(31456690-31456804)
chr3 (14-131)||(26141515-26141632)
chr3 (12-131)||(8956762-8956881)
chr3 (16-131)||(49607414-49607529)
chr3 (12-130)||(13898036-13898154)
chr3 (12-126)||(52629305-52629419)
chr3 (12-131)||(11347903-11348022)
chr3 (28-131)||(27714888-27714991)
chr3 (14-131)||(41189747-41189864)
chr3 (12-131)||(17470405-17470524)
chr3 (12-126)||(26754700-26754814)
chr3 (22-131)||(11095346-11095453)
chr3 (21-127)||(48587081-48587187)
chr3 (18-131)||(33118838-33118951)
chr3 (12-133)||(41080707-41080826)
chr3 (12-133)||(51419341-51419462)
chr3 (12-132)||(47531864-47531984)
chr3 (12-131)||(9562999-9563118)
chr3 (12-131)||(20764896-20765015)
chr3 (12-127)||(30801714-30801829)
chr3 (12-131)||(45058534-45058652)
chr3 (16-131)||(35965767-35965874)
chr3 (14-131)||(11907371-11907488)
chr3 (12-131)||(36707409-36707524)
chr3 (12-128)||(25407128-25407245)
chr3 (12-109)||(36331310-36331407)
chr3 (12-123)||(39670019-39670130)
chr3 (12-131)||(48375687-48375806)
chr3 (12-131)||(1758437-1758558)
chr3 (12-126)||(42823116-42823230)
chr3 (28-124)||(35093592-35093688)
chr3 (63-131)||(21746213-21746283)
chr3 (16-126)||(25395318-25395428)
chr3 (63-122)||(43745755-43745814)
chr3 (61-105)||(42100811-42100854)
chr3 (49-105)||(45126862-45126917)
chr3 (61-105)||(46941176-46941219)
chr3 (61-105)||(53581792-53581835)
[»] chr1 (41 HSPs)
chr1 (12-131)||(9474857-9474976)
chr1 (12-131)||(2581915-2582034)
chr1 (12-131)||(27564716-27564835)
chr1 (12-131)||(32813247-32813366)
chr1 (12-131)||(51898664-51898783)
chr1 (12-132)||(3000318-3000438)
chr1 (16-131)||(8346373-8346488)
chr1 (12-131)||(47452301-47452420)
chr1 (12-128)||(44548357-44548473)
chr1 (12-131)||(23597072-23597191)
chr1 (12-131)||(37649198-37649317)
chr1 (12-131)||(38595154-38595273)
chr1 (12-131)||(38632302-38632421)
chr1 (12-131)||(48716263-48716382)
chr1 (12-131)||(50630458-50630577)
chr1 (12-131)||(41758805-41758924)
chr1 (12-130)||(11152359-11152476)
chr1 (12-131)||(43132-43251)
chr1 (12-131)||(50590981-50591100)
chr1 (12-131)||(5958981-5959100)
chr1 (12-131)||(41608474-41608593)
chr1 (12-131)||(49811508-49811627)
chr1 (12-131)||(6260870-6260989)
chr1 (12-131)||(37926419-37926538)
chr1 (21-128)||(26274435-26274542)
chr1 (21-124)||(26440741-26440844)
chr1 (12-131)||(45044541-45044660)
chr1 (12-131)||(47748443-47748561)
chr1 (12-131)||(3302514-3302633)
chr1 (12-126)||(44453984-44454098)
chr1 (12-101)||(13414791-13414880)
chr1 (12-131)||(7740733-7740852)
chr1 (12-90)||(44332352-44332430)
chr1 (12-104)||(48489328-48489419)
chr1 (61-105)||(5489899-5489942)
chr1 (61-105)||(43571020-43571063)
chr1 (61-105)||(48498896-48498939)
chr1 (60-105)||(750239-750283)
chr1 (61-105)||(4401451-4401494)
chr1 (61-105)||(7447948-7447991)
chr1 (61-105)||(50448194-50448237)
[»] chr5 (34 HSPs)
chr5 (15-131)||(28177775-28177891)
chr5 (12-131)||(2740274-2740393)
chr5 (12-128)||(18520865-18520981)
chr5 (12-140)||(36732923-36733051)
chr5 (12-131)||(40145407-40145526)
chr5 (12-131)||(6679698-6679817)
chr5 (12-131)||(14831814-14831933)
chr5 (12-131)||(33149619-33149738)
chr5 (12-131)||(35785199-35785318)
chr5 (12-131)||(42414283-42414402)
chr5 (133-228)||(2485055-2485151)
chr5 (12-131)||(13811652-13811771)
chr5 (12-132)||(20073497-20073617)
chr5 (12-131)||(2252149-2252268)
chr5 (12-131)||(26720516-26720635)
chr5 (12-131)||(26990265-26990384)
chr5 (12-131)||(33825305-33825424)
chr5 (12-131)||(3921246-3921365)
chr5 (12-131)||(15409591-15409710)
chr5 (16-131)||(35943877-35943992)
chr5 (12-131)||(31008988-31009107)
chr5 (12-130)||(16327902-16328020)
chr5 (12-131)||(9603813-9603932)
chr5 (12-131)||(6259982-6260101)
chr5 (72-130)||(36875644-36875702)
chr5 (12-131)||(39688878-39688997)
chr5 (68-126)||(10356639-10356698)
chr5 (14-87)||(21370048-21370121)
chr5 (42-131)||(41470427-41470516)
chr5 (12-108)||(39557498-39557594)
chr5 (16-116)||(25831302-25831400)
chr5 (14-131)||(38296203-38296320)
chr5 (49-104)||(38470690-38470744)
chr5 (61-105)||(5257118-5257161)
[»] chr6 (26 HSPs)
chr6 (12-131)||(32869678-32869797)
chr6 (12-128)||(22880639-22880755)
chr6 (12-131)||(17598554-17598673)
chr6 (12-131)||(31953011-31953130)
chr6 (12-131)||(31976248-31976367)
chr6 (12-131)||(11427616-11427737)
chr6 (12-131)||(6209446-6209565)
chr6 (12-131)||(31110742-31110859)
chr6 (12-131)||(15508005-15508124)
chr6 (12-131)||(15990023-15990142)
chr6 (12-131)||(30341341-30341460)
chr6 (12-131)||(4231548-4231667)
chr6 (16-131)||(31109385-31109500)
chr6 (27-127)||(28536484-28536582)
chr6 (12-131)||(29857827-29857946)
chr6 (12-131)||(12732482-12732601)
chr6 (14-140)||(15832568-15832694)
chr6 (16-128)||(23128112-23128224)
chr6 (12-130)||(946377-946495)
chr6 (16-126)||(9379697-9379807)
chr6 (12-87)||(30870058-30870133)
chr6 (97-131)||(22422084-22422118)
chr6 (61-105)||(3213523-3213566)
chr6 (61-105)||(21293611-21293654)
chr6 (61-105)||(7367672-7367715)
chr6 (61-105)||(26669943-26669986)
[»] scaffold1268 (1 HSPs)
scaffold1268 (12-131)||(910-1029)
[»] scaffold1267 (1 HSPs)
scaffold1267 (12-131)||(910-1029)
[»] scaffold0321 (1 HSPs)
scaffold0321 (12-131)||(10090-10209)
[»] scaffold0237 (1 HSPs)
scaffold0237 (12-131)||(4029-4148)
[»] scaffold0018 (1 HSPs)
scaffold0018 (12-111)||(152518-152617)
[»] scaffold0316 (1 HSPs)
scaffold0316 (17-108)||(17077-17168)
[»] scaffold0110 (1 HSPs)
scaffold0110 (12-131)||(8844-8963)
[»] scaffold0119 (1 HSPs)
scaffold0119 (61-105)||(808-851)


Alignment Details
Target: chr4 (Bit Score: 100; Significance: 1e-49; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 50052409 - 50052528
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    ||||||||||||||||||||||||||||| |||||| |||||||| |||| ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  50052409 agagaagaggagaggaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagg 50052508  T
Q  112 atgtctatgtatcattactc 131  Q
    ||||||||||||||||||||    
T  50052509 atgtctatgtatcattactc 50052528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 11511443 - 11511562
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    ||||||||| |||| |||||||||||||| |||||| |||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  11511443 agagaagagaagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 11511542  T
Q  112 atgtctatgtatcattactc 131  Q
     |||||||||||||||||||    
T  11511543 gtgtctatgtatcattactc 11511562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 48183030 - 48183149
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||||||||| |||||||||||||| |||||| |||||||| |||| ||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  48183030 agagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacgtaagg 48183129  T
Q  112 atgtctatgtatcattactc 131  Q
     |||||||||||||||||||    
T  48183130 gtgtctatgtatcattactc 48183149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 12 - 132
Target Start/End: Complemental strand, 41236466 - 41236346
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||||||||| |||||||||||||| |||||| |||||||| |||| ||||||||||||||| ||||| ||||||| |||||||||||||||||||    
T  41236466 agagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgtcaaaaggtgtattgccacctaagg 41236367  T
Q  112 atgtctatgtatcattactcg 132  Q
     ||||||||||||||||||||    
T  41236366 gtgtctatgtatcattactcg 41236346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 480428 - 480547
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||||||||| |||||||||||||| |||| | |||||||| |||| ||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  480428 agagaagaggagagaaaagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtcacctaagg 480527  T
Q  112 atgtctatgtatcattactc 131  Q
     |||||||||||||||||||    
T  480528 gtgtctatgtatcattactc 480547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 6034163 - 6034044
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||||||||| |||||||||||||| |||||| || ||||| |||| || |||||||||||| |||||||||||||||||||||||||||||||||    
T  6034163 agagaagaggagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacatgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagg 6034064  T
Q  112 atgtctatgtatcattactc 131  Q
     |||||||||||||||||||    
T  6034063 gtgtctatgtatcattactc 6034044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 50526152 - 50526271
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||||||||||||| |||||| ||| |||||| |  ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| |    
T  50526152 agagaagaggagaggaaatagaaagcgtgcttgtgcggaatccacgtgaccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaag 50526251  T
Q  112 atgtctatgtatcattactc 131  Q
    ||||||||||||||||||||    
T  50526252 atgtctatgtatcattactc 50526271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 29240005 - 29239886
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    ||||||||||||||||||||||||||||| |||||  |||||||| |||| |||||| |||||||| ||||| ||||||| |||||||||||||||||||    
T  29240005 agagaagaggagaggaaagagaaagtgtgcttgtgtggggtccacgtgactacgtgttagatttttgtgtggatgtcaaatggtgtattgccacctaagg 29239906  T
Q  112 atgtctatgtatcattactc 131  Q
     |||||||||||||||||||    
T  29239905 gtgtctatgtatcattactc 29239886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 42044348 - 42044467
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||||||||| |||||||||||||| |||||| |||||||| |||| ||||||||||||||| |||||||||  |||| |||||||||||||||||    
T  42044348 agagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtacaaggatgtattgccacctaagg 42044447  T
Q  112 atgtctatgtatcattactc 131  Q
     |||||||||||||||||||    
T  42044448 gtgtctatgtatcattactc 42044467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 12 - 136
Target Start/End: Complemental strand, 55475310 - 55475186
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    ||||||||| ||| ||||||||||||||  || ||||||||||| ||| |||| |||||||||||| |||||||||||||||||||||||||||||||||    
T  55475310 agagaagagaagaagaaagagaaagtgtacttatgcagggtccatatggccacatgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagg 55475211  T
Q  112 atgtctatgtatcattactcgtatg 136  Q
    |||| |||||||||| |||| ||||    
T  55475210 atgtttatgtatcataactcttatg 55475186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 24995088 - 24995207
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||||||||| ||||||||| |||| |||||| |||||||| |||| |||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  24995088 agagaagaggagagaaaagagaaaatgtgcttgtgcggggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgccatctaagg 24995187  T
Q  112 atgtctatgtatcattactc 131  Q
     |||| || |||||||||||    
T  24995188 gtgtccatatatcattactc 24995207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 29234226 - 29234345
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||||||||| |||||||||||||| |||||| |||||||| |||| ||||||||||||||| ||  ||| |||||||||||||||||| ||||||    
T  29234226 agagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgaaggtatcaaagggtgtattgccatctaagg 29234325  T
Q  112 atgtctatgtatcattactc 131  Q
     |||||||||||||||||||    
T  29234326 gtgtctatgtatcattactc 29234345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 54473514 - 54473633
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||||||||| ||||| |||||||| |||||| |||||||| |||| |||||| |||||||| ||||||||||||| ||||||||| |||||||||    
T  54473514 agagaagaggagagaaaagataaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaatggtgtattgtcacctaagg 54473613  T
Q  112 atgtctatgtatcattactc 131  Q
     |||||||||||||||||||    
T  54473614 gtgtctatgtatcattactc 54473633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 3481773 - 3481654
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||| | |||||||||||||||||| |||||  |||||||| |||| | ||||||||||||| |||||||||||||| |||||||||||||||| |    
T  3481773 agagaagatgggaggaaagagaaagtgtgcttgtgtggggtccacgtgactatgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaaag 3481674  T
Q  112 atgtctatgtatcattactc 131  Q
     |||||||||||||||||||    
T  3481673 gtgtctatgtatcattactc 3481654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 31910311 - 31910192
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||| ||||| |||||||||||||| |||||| |||||||  || | | ||||||||||||| |||||||||||||| |||||||| |||||||||    
T  31910311 agagaagatgagagaaaagagaaagtgtgcttgtgcggggtccatgtggctatgtgtcagatttttgtgtgggtgtcaaagagtgtattgtcacctaagg 31910212  T
Q  112 atgtctatgtatcattactc 131  Q
    ||||||||||||||| ||||    
T  31910211 atgtctatgtatcataactc 31910192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 12 - 132
Target Start/End: Original strand, 8343144 - 8343264
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    ||||||||| ||| |||||||||||| |  || ||| ||||||| ||| |||| |||||||||||||||| ||||||||||| |||||||||||||||||    
T  8343144 agagaagagaagaagaaagagaaagtatacttatgcggggtccatatggccacatgtcagatttttatgtaggtgtcaaaggatgtattgccacctaagg 8343243  T
Q  112 atgtctatgtatcattactcg 132  Q
    |||| |||||||||| |||||    
T  8343244 atgtttatgtatcataactcg 8343264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 19670697 - 19670816
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    ||||||||| ||| ||||||||||||||  |||||| ||||||| ||| |||| |||||||||||| |||| ||||||| ||||||||||||||||||||    
T  19670697 agagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgagtgtcaaggggtgtattgccacctaagg 19670796  T
Q  112 atgtctatgtatcattactc 131  Q
     ||| |||||||||| ||||    
T  19670797 gtgtttatgtatcataactc 19670816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 40574898 - 40574779
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||||||||| |||||||||||||| |||| | || ||||  |  |  |||||||||||||| |||||||||||||||||||||| ||||||||||    
T  40574898 agagaagaggagagaaaagagaaagtgtgcttgttcgggatccatgtagcagcgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaagg 40574799  T
Q  112 atgtctatgtatcattactc 131  Q
    ||||||||||||||| ||||    
T  40574798 atgtctatgtatcataactc 40574779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 48647707 - 48647826
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||||||||||||||||||| |||| |||||| | |||||| ||||||||||| |||||||||||||||||| ||  |||||||||  ||||||||    
T  48647707 agagaagaggagaggaaagagaaattgtgcttgtgcggagtccacgtgaccacgtgttagatttttatgtgggtgttaagaggtgtattgttacctaagg 48647806  T
Q  112 atgtctatgtatcattactc 131  Q
    |||| ||||| |||| ||||    
T  48647807 atgtttatgtgtcataactc 48647826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 12 - 111
Target Start/End: Original strand, 17983724 - 17983823
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    ||||||||| ||| ||||||||||||||  |||||| ||||||| ||| |||| |||||||||||| |||||||||||| ||||||||||||||||||||    
T  17983724 agagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagg 17983823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 23608354 - 23608235
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||||||||  |||||||||||||| |||||  | || ||| |||| ||||||||||||||| ||||||||||||| ||||||||| || ||||||    
T  23608354 agagaagaggagataaaagagaaagtgtgcttgtgtggagttcacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgtcatctaagg 23608255  T
Q  112 atgtctatgtatcattactc 131  Q
     ||||||| |||||||||||    
T  23608254 gtgtctatatatcattactc 23608235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 131
Target Start/End: Complemental strand, 29978000 - 29977885
Alignment:
Q  16 aagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaaggatgt 115  Q
    ||||| ||| ||||||||||||||| |||||  ||||||| ||||| ||||||||||||||| ||||||||| || ||||||||||||||||| || | |    
T  29978000 aagagaagatgaaagagaaagtgtgcttgtgtggggtccatatgactacgtgtcagatttttgtgtgggtgttaaggggtgtattgccacctatggttct 29977901  T
Q  116 ctatgtatcattactc 131  Q
     |||||||||||||||    
T  29977900 gtatgtatcattactc 29977885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 32767077 - 32766958
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    ||||| ||| ||| ||||||||||||||  |||||||||||||| ||| |||| |||||||||||| | |||||||||| |||||||||||||||||||     
T  32767077 agagaggagaagaagaaagagaaagtgtacttgtgcagggtccatatggccacatgtcagatttttgtatgggtgtcaaggggtgtattgccacctaaga 32766978  T
Q  112 atgtctatgtatcattactc 131  Q
     ||| |||||||||| ||||    
T  32766977 gtgtttatgtatcataactc 32766958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 50813873 - 50813992
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    ||||||||| ||| ||||||||||||||  |||||| |||| || |||||||| |||||||||||| |||||||||||| ||||||||| |||||||||     
T  50813873 agagaagagaagaagaaagagaaagtgtacttgtgcggggttcatatgaccacatgtcagatttttgtgtgggtgtcaaggggtgtattaccacctaaga 50813972  T
Q  112 atgtctatgtatcattactc 131  Q
     ||| |||||||||| ||||    
T  50813973 gtgtttatgtatcataactc 50813992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 29547940 - 29548059
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    ||||||||| ||| |||||| |||||||  || ||| || |||| ||| |||| |||||||||||| |||||||||||| || |||||||||||||||||    
T  29547940 agagaagagaagaagaaagaaaaagtgtacttatgcgggatccatatggccacatgtcagatttttgtgtgggtgtcaagggatgtattgccacctaagg 29548039  T
Q  112 atgtctatgtatcattactc 131  Q
    |||| |||||||||| ||||    
T  29548040 atgtttatgtatcataactc 29548059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 47104663 - 47104544
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    ||||||||||||| ||||||||||||||| |||||  ||||| | |  ||||||||||| |||||| ||||||||||| || |||||||| || |||||     
T  47104663 agagaagaggagatgaaagagaaagtgtgtttgtgtggggtcaataaaaccacgtgtcaaatttttgtgtgggtgtcagagagtgtattgtcatctaaga 47104564  T
Q  112 atgtctatgtatcattactc 131  Q
    |||||||| |||||||||||    
T  47104563 atgtctatatatcattactc 47104544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 47986327 - 47986208
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    ||||||||| | | ||||||||||||||  |||||| ||||||| ||| |||| |||||||||||| ||||| |||||| || |||||||||||||||||    
T  47986327 agagaagagaataagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtggatgtcaagggatgtattgccacctaagg 47986228  T
Q  112 atgtctatgtatcattactc 131  Q
     ||| |||||||||| ||||    
T  47986227 gtgtttatgtatcataactc 47986208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 12 - 126
Target Start/End: Original strand, 53352547 - 53352660
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||||||||| ||||||||||| || |||||| |||||||| | || ||||||||||||||| ||| ||||| ||||  ||||||| |||||||||    
T  53352547 agagaagaggagagaaaagagaaagtatgcttgtgcggggtccacttaactacgtgtcagatttttgtgtaggtgttaaagaatgtattg-cacctaagg 53352645  T
Q  112 atgtctatgtatcat 126  Q
     ||||||||||||||    
T  53352646 gtgtctatgtatcat 53352660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 12 - 123
Target Start/End: Original strand, 28480249 - 28480360
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    ||||||||||||| ||| ||||||||||| |||||  ||||||||||||| || |||||||||||| |||| |||| ||   |||||||| |||||||||    
T  28480249 agagaagaggagatgaaggagaaagtgtgtttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaagg 28480348  T
Q  112 atgtctatgtat 123  Q
     |||||||||||    
T  28480349 ttgtctatgtat 28480360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 12 - 123
Target Start/End: Original strand, 28481124 - 28481235
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    ||||||||||||| ||| ||||||||||| |||||  ||||||||||||| || |||||||||||| |||| |||| ||   |||||||| |||||||||    
T  28481124 agagaagaggagatgaaggagaaagtgtgtttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaagg 28481223  T
Q  112 atgtctatgtat 123  Q
     |||||||||||    
T  28481224 ttgtctatgtat 28481235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 12 - 123
Target Start/End: Original strand, 28481999 - 28482110
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    ||||||||||||| ||| ||||||||||| |||||  ||||||||||||| || |||||||||||| |||| |||| ||   |||||||| |||||||||    
T  28481999 agagaagaggagatgaaggagaaagtgtgtttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaagg 28482098  T
Q  112 atgtctatgtat 123  Q
     |||||||||||    
T  28482099 ttgtctatgtat 28482110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 12 - 91
Target Start/End: Original strand, 56300146 - 56300225
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaa 91  Q
    ||||||||||||||||||||||||||||| ||||||||| | || |||||||| |||||||||||| ||||| |||||||    
T  56300146 agagaagaggagaggaaagagaaagtgtgtttgtgcaggattcatatgaccacatgtcagatttttgtgtggatgtcaaa 56300225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 55079694 - 55079814
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcaggg-tccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaag 110  Q
    ||||||||| ||| ||||||||||||||  |||||  ||| |||| ||| |||| |||||||||||| | ||||||||||  ||||||||||||||||||    
T  55079694 agagaagagaagaagaaagagaaagtgtacttgtgtgggggtccatatggccacatgtcagatttttgtatgggtgtcaagaggtgtattgccacctaag 55079793  T
Q  111 gatgtctatgtatcattactc 131  Q
    | ||| |||||||||| ||||    
T  55079794 ggtgtttatgtatcataactc 55079814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 12 - 93
Target Start/End: Complemental strand, 41824001 - 41823920
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagg 93  Q
    |||||||| ||||| |||||||||||||| |||||| |||||||  |||| ||||||||||||||| ||||||||| |||||    
T  41824001 agagaagaagagagaaaagagaaagtgtgcttgtgcggggtccatgtgactacgtgtcagatttttgtgtgggtgttaaagg 41823920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 19 - 126
Target Start/End: Complemental strand, 18769221 - 18769114
Alignment:
Q  19 aggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaaggatgtcta 118  Q
    |||||| |||||||||| |||  |||||  ||||  ||||||||||||||||||||||| ||||||||| | ||||||||| |  || ||||||||| ||    
T  18769221 aggagatgaaagagaaaatgtatttgtgtggggtttacatgaccacgtgtcagatttttgtgtgggtgttagagggtgtatgggtacataaggatgttta 18769122  T
Q  119 tgtatcat 126  Q
    ||||||||    
T  18769121 tgtatcat 18769114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 12 - 123
Target Start/End: Original strand, 29589721 - 29589831
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    ||||||||| ||| ||||||||||||||  |||||  ||||||| ||| |||| | |||||||||| |||||||||||| |||||||||| || ||||||    
T  29589721 agagaagagaagaagaaagagaaagtgtacttgtgtggggtccatatggccacatatcagatttttgtgtgggtgtcaaggggtgtattg-caactaagg 29589819  T
Q  112 atgtctatgtat 123  Q
     ||| |||||||    
T  29589820 gtgtttatgtat 29589831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 44536727 - 44536845
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    ||||||||| ||| ||||||||||||||  || ||  ||||| | |||||||| |||||||||||| ||||| |||| ||||||||||||||||||||      
T  44536727 agagaagagaagaagaaagagaaagtgtacttatgtggggtctatatgaccacatgtcagatttttgtgtggatgtc-aagggtgtattgccacctaaaa 44536825  T
Q  112 atgtctatgtatcattactc 131  Q
     ||| |||||||||| ||||    
T  44536826 gtgtttatgtatcataactc 44536845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 12 - 111
Target Start/End: Original strand, 18924476 - 18924575
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    ||||||||| ||| ||||||||||||||  |||||| | || || ||  |||| |||||||||||| ||||| | |||| ||||||||||||||||||||    
T  18924476 agagaagagaagaagaaagagaaagtgtacttgtgcggagttcatattgccacatgtcagatttttgtgtggatatcaaggggtgtattgccacctaagg 18924575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 105
Target Start/End: Complemental strand, 48463428 - 48463384
Alignment:
Q  60 accacgtgtcagatttttatgtgggtgtcaaagggtgtattgccac 105  Q
    ||||| ||||||| |||||||||||||| |||||||||||||||||    
T  48463428 accacatgtcagaattttatgtgggtgt-aaagggtgtattgccac 48463384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 105
Target Start/End: Complemental strand, 27893819 - 27893776
Alignment:
Q  61 ccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccac 105  Q
    |||| ||||||| |||||||||||||| |||||||||||||||||    
T  27893819 ccacatgtcagaattttatgtgggtgt-aaagggtgtattgccac 27893776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 105
Target Start/End: Original strand, 31681025 - 31681068
Alignment:
Q  61 ccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccac 105  Q
    |||||||||||| |||||||| ||||| |||||||||||||||||    
T  31681025 ccacgtgtcagaattttatgtaggtgt-aaagggtgtattgccac 31681068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 105
Target Start/End: Complemental strand, 55966323 - 55966280
Alignment:
Q  61 ccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccac 105  Q
    |||| ||||||| |||||||||||||| |||||||||||||||||    
T  55966323 ccacctgtcagaattttatgtgggtgt-aaagggtgtattgccac 55966280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 96; Significance: 3e-47; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 9058599 - 9058480
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||||||||| |||||||||||||| |||||| ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  9058599 agagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagg 9058500  T
Q  112 atgtctatgtatcattactc 131  Q
     |||||||||||||||||||    
T  9058499 gtgtctatgtatcattactc 9058480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 12 - 128
Target Start/End: Original strand, 19930801 - 19930917
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||||||||| |||||||||||||| |||||| ||||||||||||| ||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  19930801 agagaagaggagagaaaagagaaagtgtgtttgtgcggggtccacatgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacctaagg 19930900  T
Q  112 atgtctatgtatcatta 128  Q
     ||||||||||||||||    
T  19930901 gtgtctatgtatcatta 19930917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 33436081 - 33436200
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||| |||||||||||||||||||| |||||| |||||||| |||| |||||| |||||||| |||||||||||||||||||||||||||||||||    
T  33436081 agagaagatgagaggaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattgccacctaagg 33436180  T
Q  112 atgtctatgtatcattactc 131  Q
     |||||||||||||||||||    
T  33436181 gtgtctatgtatcattactc 33436200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 33436330 - 33436211
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    ||||||||||| ||||||||||||||||| |||||||  |||||||||  |||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  33436330 agagaagaggataggaaagagaaagtgtgcttgtgcaaagtccacatggtcacgtgtcagatttttatgtgggtgtcaaaaggtgtattgccatctaagg 33436231  T
Q  112 atgtctatgtatcattactc 131  Q
    ||||||||||||||||||||    
T  33436230 atgtctatgtatcattactc 33436211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 12 - 128
Target Start/End: Complemental strand, 28863574 - 28863458
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||||||||  |||||||||||||| |||||| |||||||| |||| ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  28863574 agagaagaggagataaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagg 28863475  T
Q  112 atgtctatgtatcatta 128  Q
     ||||||||||||||||    
T  28863474 gtgtctatgtatcatta 28863458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 13438462 - 13438343
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||||||||| |||||||||||||| |||||| |||||||| |||| ||||||||||||||| ||||||||||||||| ||||||| |||||||||    
T  13438462 agagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgtcacctaagg 13438363  T
Q  112 atgtctatgtatcattactc 131  Q
     |||||||||||||||||||    
T  13438362 gtgtctatgtatcattactc 13438343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 17473139 - 17473020
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||||||||| |||||||||||||| |||||| || ||||| |||| ||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  17473139 agagaagaggagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagg 17473040  T
Q  112 atgtctatgtatcattactc 131  Q
     |||||||||||||||||||    
T  17473039 gtgtctatgtatcattactc 17473020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 20700934 - 20700815
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    ||||||||||||||||||||||||||||| || ||| |||||||| |||| ||||||||||||||| ||| || |||||||||||||||||||| |||||    
T  20700934 agagaagaggagaggaaagagaaagtgtgcttatgcggggtccacgtgactacgtgtcagatttttgtgtaggagtcaaagggtgtattgccacataagg 20700835  T
Q  112 atgtctatgtatcattactc 131  Q
    ||||||||||||||||||||    
T  20700834 atgtctatgtatcattactc 20700815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 30915582 - 30915463
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||| ||||| |||||||||||||| |||| | |||||||| |||| |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  30915582 agagaagatgagagaaaagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttatgtgggggtcaaagggtgtattgccacctaagg 30915483  T
Q  112 atgtctatgtatcattactc 131  Q
     |||||||||||||||||||    
T  30915482 gtgtctatgtatcattactc 30915463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 40701597 - 40701478
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||| ||||| ||||||||||||||||||||| |||||||| | || ||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  40701597 agagaagatgagagaaaagagaaagtgtgattgtgcggggtccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagg 40701498  T
Q  112 atgtctatgtatcattactc 131  Q
     |||||||||||||||||||    
T  40701497 gtgtctatgtatcattactc 40701478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 14 - 131
Target Start/End: Original strand, 40613885 - 40614002
Alignment:
Q  14 agaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaaggat 113  Q
    |||| ||||||| |||||||||||||| |||||| |||||||  || ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  40613885 agaataggagagaaaagagaaagtgtgcttgtgcggggtccatgtggccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggat 40613984  T
Q  114 gtctatgtatcattactc 131  Q
    ||||||||||||| ||||    
T  40613985 gtctatgtatcataactc 40614002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 16 - 131
Target Start/End: Original strand, 10249367 - 10249482
Alignment:
Q  16 aagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaaggatgt 115  Q
    |||||||||| |||||||||||||| |||||| |||||||| |||| ||||||||||||||| ||||||||||||| ||||||||| ||||||||| |||    
T  10249367 aagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaagggtgt 10249466  T
Q  116 ctatgtatcattactc 131  Q
    ||||||||||||||||    
T  10249467 ctatgtatcattactc 10249482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 32505629 - 32505748
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||||||||| ||| |||||||||| |||||| |||||||| |||| ||||||||||||||| ||||||||||||| ||||||||| |||||||||    
T  32505629 agagaagaggagagaaaatagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaagg 32505728  T
Q  112 atgtctatgtatcattactc 131  Q
     |||||||||||||||||||    
T  32505729 gtgtctatgtatcattactc 32505748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 22 - 131
Target Start/End: Original strand, 5574479 - 5574588
Alignment:
Q  22 agaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaaggatgtctatgt 121  Q
    |||| |||||||||||||| |||||| || ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||    
T  5574479 agagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagagtgtctatgt 5574578  T
Q  122 atcattactc 131  Q
    ||||||||||    
T  5574579 atcattactc 5574588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 14 - 131
Target Start/End: Complemental strand, 42257310 - 42257193
Alignment:
Q  14 agaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaaggat 113  Q
    |||||||||||| |||||||||||||| |||||| |||||||  || ||||||||||||||||||||||||||||||| | ||||||||||||||| |||    
T  42257310 agaagaggagagaaaagagaaagtgtgcttgtgcggggtccatgtggccacgtgtcagatttttatgtgggtgtcaaatgatgtattgccacctaaagat 42257211  T
Q  114 gtctatgtatcattactc 131  Q
    ||||||||||||| ||||    
T  42257210 gtctatgtatcataactc 42257193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 7465716 - 7465835
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||| ||||  |||||||||||||| |||||  |||||||| |||| ||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  7465716 agagaagaagagataaaagagaaagtgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagg 7465815  T
Q  112 atgtctatgtatcattactc 131  Q
     |||||||||||||||||||    
T  7465816 gtgtctatgtatcattactc 7465835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 28381636 - 28381755
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||| ||||| |||||||||||||| |||||| | |||||  |||| ||||||||||||||| |||||||||| || |||||||||||||||||||    
T  28381636 agagaagatgagagaaaagagaaagtgtgcttgtgcggagtccatgtgactacgtgtcagatttttgtgtgggtgtcgaaaggtgtattgccacctaagg 28381735  T
Q  112 atgtctatgtatcattactc 131  Q
     |||||||||||||||||||    
T  28381736 gtgtctatgtatcattactc 28381755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 12 - 130
Target Start/End: Complemental strand, 41575257 - 41575138
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcaggg-tccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaag 110  Q
    ||||||||||||| ||||||||||||||| ||||| |||| ||||||||||||| ||||| |||||| ||||  |||||||||||||||| ||| |||||    
T  41575257 agagaagaggagatgaaagagaaagtgtgcttgtgtaggggtccacatgaccacatgtcaaatttttgtgtgaatgtcaaagggtgtattaccatctaag 41575158  T
Q  111 gatgtctatgtatcattact 130  Q
    ||||||||||||||||||||    
T  41575157 gatgtctatgtatcattact 41575138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 26 - 131
Target Start/End: Complemental strand, 27864809 - 27864704
Alignment:
Q  26 gaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatca 125  Q
    ||||||||||||||| || ||| |||||||| |||  ||||||||||||||| ||||| ||||||||||||||||||||| ||||| |||||||||||||    
T  27864809 gaaagagaaagtgtgcttttgcggggtccacgtgattacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacataagggtgtctatgtatca 27864710  T
Q  126 ttactc 131  Q
    ||||||    
T  27864709 ttactc 27864704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 17819985 - 17820104
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    ||||||||||||| |||||||||| |||| |||||  |||||||| | ||||| |||||||||||| |||||||||||| |||||||||||||||||  |    
T  17819985 agagaagaggagatgaaagagaaaatgtgtttgtgtggggtccacgtaaccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctatag 17820084  T
Q  112 atgtctatgtatcattactc 131  Q
     |||||||||||||| ||||    
T  17820085 ttgtctatgtatcataactc 17820104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 26891485 - 26891604
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    ||||||||| |||||||||||||| |||| |||| |  ||||||| ||||||| |||||||||||| |||||||||| | ||||||||||||||||||||    
T  26891485 agagaagagaagaggaaagagaaaatgtgcttgttcgaggtccacgtgaccacatgtcagatttttgtgtgggtgtctaggggtgtattgccacctaagg 26891584  T
Q  112 atgtctatgtatcattactc 131  Q
     || ||||||||||| ||||    
T  26891585 gtggctatgtatcataactc 26891604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 38273123 - 38273242
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||| ||||||| |||||||||||||| | |||| |||||||  || | ||||||||||||||| ||||||||| |||||||||||||||| |||||     
T  38273123 agagaataggagagaaaagagaaagtgtgctagtgcggggtccatgtggctacgtgtcagatttttgtgtgggtgttaaagggtgtattgccatctaaga 38273222  T
Q  112 atgtctatgtatcattactc 131  Q
    ||||||||||||||| ||||    
T  38273223 atgtctatgtatcataactc 38273242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 45097716 - 45097835
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    ||||||||| ||| ||||||||||||||  |||||| ||||||| ||| |||| |||||||||||| | |||||||||| || |||||||||||||||||    
T  45097716 agagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtatgggtgtcaagggatgtattgccacctaagg 45097815  T
Q  112 atgtctatgtatcattactc 131  Q
    |||| |||||||||| ||||    
T  45097816 atgtttatgtatcataactc 45097835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 12 - 111
Target Start/End: Original strand, 2997468 - 2997567
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    ||||||||| ||| ||||||||||||||  |||||| ||||||| ||| |||| |||||||||||| |||||||||||| ||||||||||||||||||||    
T  2997468 agagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagg 2997567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 4060804 - 4060685
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||| ||||| ||| |||||||||| || ||| || ||||| | || ||||||||||||||| ||||| ||||||| ||||||||| |||||||||    
T  4060804 agagaagatgagagaaaaaagaaagtgtgcttatgcgggatccacgtaactacgtgtcagatttttgtgtggatgtcaaaaggtgtattgtcacctaagg 4060705  T
Q  112 atgtctatgtatcattactc 131  Q
     |||||||||||||||||||    
T  4060704 gtgtctatgtatcattactc 4060685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 38732473 - 38732354
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    ||||||||| ||| ||||||||||||||  |||||| ||||||| |||||||| |||||||||||| |||||||||||| || ||||||| ||| |||||    
T  38732473 agagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatgaccacatgtcagatttttgtgtgggtgtcaagggatgtattgtcacataagg 38732374  T
Q  112 atgtctatgtatcattactc 131  Q
     ||| |||||||||| ||||    
T  38732373 gtgtttatgtatcataactc 38732354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 43490240 - 43490121
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    ||||||||| ||| |||||| |||||||  |||||| ||||||| ||| |||| |||||||||||| |||||||||||| |||||||||| |||||||||    
T  43490240 agagaagagaagaagaaagataaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgtcacctaagg 43490141  T
Q  112 atgtctatgtatcattactc 131  Q
     ||| |||||||||| ||||    
T  43490140 gtgtttatgtatcataactc 43490121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 12 - 125
Target Start/End: Complemental strand, 3440098 - 3439985
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||||||||||||||||||| |||| |||||| |||||||| | | ||| ||| |||||||| |||||||||| | | ||||||||||||||||||    
T  3440098 agagaagaggagaggaaagagaaaatgtgcttgtgcggggtccacgtaatcacatgttagatttttgtgtgggtgtccaggagtgtattgccacctaagg 3439999  T
Q  112 atgtctatgtatca 125  Q
     |||||| ||||||    
T  3439998 gtgtctacgtatca 3439985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 2533242 - 2533124
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||||||||  ||||| |||||||| |||||| ||||| |  || | ||||||||||||||| ||||| ||||||||| ||||||||||| |||||    
T  2533242 agagaagaggagataaaagaaaaagtgtgcttgtgcggggtctatgtggctacgtgtcagatttttgtgtgg-tgtcaaaggatgtattgccacttaagg 2533144  T
Q  112 atgtctatgtatcattactc 131  Q
    ||||||||||||||| ||||    
T  2533143 atgtctatgtatcataactc 2533124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 36168955 - 36168836
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||| ||||||| ||||||||||| || |||||| |||||||  || |||||||||| |||||| |||||| || ||||| ||||||| || ||||||    
T  36168955 agagaataggagagaaaagagaaagtatgcttgtgcggggtccatgtggccacgtgtcaaatttttgtgtgggagttaaaggatgtattgtcatctaagg 36168856  T
Q  112 atgtctatgtatcattactc 131  Q
    ||||||||||||||| ||||    
T  36168855 atgtctatgtatcataactc 36168836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 49 - 131
Target Start/End: Original strand, 38882832 - 38882913
Alignment:
Q  49 gggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattactc 131  Q
    |||||||| |||| ||||||||||||||| ||||| ||||||||||| ||||||||||||||| |||||||||||||||||||    
T  38882832 gggtccacgtgactacgtgtcagatttttgtgtggatgtcaaagggt-tattgccacctaagggtgtctatgtatcattactc 38882913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 3738060 - 3737986
Alignment:
Q  14 agaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtc 88  Q
    |||||||||||||||| ||||| |||| |||||| |||||||||||||||| |||||||||||| ||||||||||    
T  3738060 agaagaggagaggaaaaagaaaatgtgcttgtgcggggtccacatgaccacatgtcagatttttgtgtgggtgtc 3737986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 12 - 111
Target Start/End: Complemental strand, 13365472 - 13365373
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    ||||||||| ||| ||||||||||||||  |||||| ||||||| |||  ||| |||||||||||| |||||||||||| |||| |||||||| ||||||    
T  13365472 agagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggtcacatgtcagatttttgtgtgggtgtcaaggggtatattgccatctaagg 13365373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 131
Target Start/End: Original strand, 15428725 - 15428840
Alignment:
Q  16 aagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaaggatgt 115  Q
    ||||||||| |||||||||| |||| ||| |  ||||  ||||| |||| |||||||||||| |||| |||| || |||||||| ||||| |||||||||    
T  15428725 aagaggagatgaaagagaaaatgtgtttgcgtggggtttacatggccacatgtcagatttttgtgtgagtgttaaggggtgtatggccacataaggatgt 15428824  T
Q  116 ctatgtatcattactc 131  Q
     |||||||||| ||||    
T  15428825 ttatgtatcataactc 15428840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 63 - 131
Target Start/End: Complemental strand, 17823852 - 17823784
Alignment:
Q  63 acgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattactc 131  Q
    ||||||||||||||| |||||||||  | |  ||||||||||||||||||||| |||||||||||||||    
T  17823852 acgtgtcagatttttgtgtgggtgttcaggaatgtattgccacctaaggatgtatatgtatcattactc 17823784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 44152046 - 44151928
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccac---atgaccacgtgtcagatttttat-gtgggtgtcaaagggtgtattgccacct 107  Q
    ||||||||||||| ||||||||||||||| |||||  || | |||   || |||||||||||||||||| | || ||||| |||| |||||||| |||||    
T  44152046 agagaagaggagatgaaagagaaagtgtgcttgtgtgggattcactacataaccacgtgtcagattttttttgtaggtgttaaagagtgtattgtcacct 44151947  T
Q  108 aaggatgtctatgtatcat 126  Q
    |  | ||||||||||||||    
T  44151946 atagttgtctatgtatcat 44151928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 124
Target Start/End: Original strand, 21301483 - 21301593
Alignment:
Q  14 agaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaaggat 113  Q
    ||||||| |||  |||||||||||||| ||||| || |||||||||| ||||| || ||||||| |||| || || | | || ||||||||| ||| |||    
T  21301483 agaagagaagataaaagagaaagtgtgtttgtgtagagtccacatgatcacgtatctgatttttgtgtgagtatcgaggagtatattgccacttaaagat 21301582  T
Q  114 gtctatgtatc 124  Q
    |||||| ||||    
T  21301583 gtctatctatc 21301593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 77
Target Start/End: Original strand, 3034964 - 3035029
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagattttt 77  Q
    ||||||||| ||| |||||||||||| |  |||||| ||||||| |||||||| ||||||||||||    
T  3034964 agagaagagaagaagaaagagaaagtatacttgtgcggggtccatatgaccacatgtcagattttt 3035029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 77
Target Start/End: Complemental strand, 3154258 - 3154197
Alignment:
Q  16 aagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagattttt 77  Q
    ||||||||| |||||||||| |||| ||| || || ||||  ||||||||||||||||||||    
T  3154258 aagaggagatgaaagagaaactgtgtttgggcgggatccatgtgaccacgtgtcagattttt 3154197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 105
Target Start/End: Original strand, 16096871 - 16096914
Alignment:
Q  61 ccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccac 105  Q
    |||||||||||| |||| ||||||||| |||||||||||||||||    
T  16096871 ccacgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 16096914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 123
Target Start/End: Complemental strand, 41758653 - 41758593
Alignment:
Q  63 acgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtat 123  Q
    ||||||||||||||||| | ||||||||| ||| |||| ||||||||  ||||| ||||||    
T  41758653 acgtgtcagatttttatataggtgtcaaaaggtatattaccacctaaaaatgtccatgtat 41758593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 105
Target Start/End: Complemental strand, 42849836 - 42849793
Alignment:
Q  61 ccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccac 105  Q
    |||||||||||| |||| ||||||||| |||||||||||||||||    
T  42849836 ccacgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 42849793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 95; Significance: 1e-46; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 12 - 130
Target Start/End: Complemental strand, 5957949 - 5957831
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||||||||||||||||||||||||||||||| || ||||| |||| ||||||||||||||| ||||||||||||||||||||||||||||||||     
T  5957949 agagaagaggagaggaaagagaaagtgtgattgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaga 5957850  T
Q  112 atgtctatgtatcattact 130  Q
    |||||||||||||||||||    
T  5957849 atgtctatgtatcattact 5957831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 12831166 - 12831047
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||||||||| |||||||||||||| |||||| |||||||| |||| ||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  12831166 agagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtcacctaagg 12831067  T
Q  112 atgtctatgtatcattactc 131  Q
     |||||||||||||||||||    
T  12831066 gtgtctatgtatcattactc 12831047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 37038598 - 37038479
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||||||||||||| |||||||||| |||||| || ||||| |||| ||||||||||||||| ||||||||||||||||||||||||||||||| |    
T  37038598 agagaagaggagaggaaatagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaag 37038499  T
Q  112 atgtctatgtatcattactc 131  Q
    ||||||||||||||||||||    
T  37038498 atgtctatgtatcattactc 37038479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 40423924 - 40424043
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||||||||| |||||||||||||| |||||| ||||||||||||| ||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  40423924 agagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacctaagg 40424023  T
Q  112 atgtctatgtatcattactc 131  Q
     | |||||||||||||||||    
T  40424024 gtatctatgtatcattactc 40424043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 12 - 132
Target Start/End: Original strand, 1179921 - 1180041
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||||||||| |||||||||||||| |||||| |  |||||||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  1179921 agagaagaggagagaaaagagaaagtgtgcttgtgcggaatccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaagg 1180020  T
Q  112 atgtctatgtatcattactcg 132  Q
     ||||||||||||||||||||    
T  1180021 gtgtctatgtatcattactcg 1180041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 12 - 140
Target Start/End: Complemental strand, 14548041 - 14547913
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||||||||| |||||||||||||| |||||| |||||||| |||| ||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  14548041 agagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaagg 14547942  T
Q  112 atgtctatgtatcattactcgtatgaaaa 140  Q
     |||||||||||| |||||| ||| ||||    
T  14547941 gtgtctatgtatctttactcttatcaaaa 14547913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 4854844 - 4854963
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||||||||| |||||||||||||| ||||||||||||||  || |||| | |||||||||||||| ||||| |||||||||||||||||||||||    
T  4854844 agagaagaggagagaaaagagaaagtgtgcttgtgcagggtccatgtggccacatatcagatttttatgtaggtgttaaagggtgtattgccacctaagg 4854943  T
Q  112 atgtctatgtatcattactc 131  Q
    ||||||||||||||||||||    
T  4854944 atgtctatgtatcattactc 4854963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 16 - 131
Target Start/End: Complemental strand, 15197448 - 15197333
Alignment:
Q  16 aagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaaggatgt 115  Q
    |||||||||| |||||||||||||| |||||| |||||||| |||| ||||||||||||||| ||||||||||||||||||||||||||||||||  |||    
T  15197448 aagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtgt 15197349  T
Q  116 ctatgtatcattactc 131  Q
    ||||||||||||||||    
T  15197348 ctatgtatcattactc 15197333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 504102 - 504221
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||| ||||| |||||||| ||||| |||||| |||||||| |||| ||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  504102 agagaagatgagagaaaagagaatgtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagg 504201  T
Q  112 atgtctatgtatcattactc 131  Q
     |||||||||||||||||||    
T  504202 gtgtctatgtatcattactc 504221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 34012277 - 34012396
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||||||||| |||||||||||||| |||||| || ||||| |||| |||||||| |||||| |||||||||||||||||||||| ||||||||||    
T  34012277 agagaagaggagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattaccacctaagg 34012376  T
Q  112 atgtctatgtatcattactc 131  Q
     |||||||||||||||||||    
T  34012377 gtgtctatgtatcattactc 34012396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 23122578 - 23122697
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||| ||||||| |||||||||||||| || ||| |||||||| |||| ||||||||||||||| ||||||||||||| ||||||||||||| |||||    
T  23122578 agagaacaggagagaaaagagaaagtgtgcttatgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacttaagg 23122677  T
Q  112 atgtctatgtatcattactc 131  Q
     |||||||||||||||||||    
T  23122678 gtgtctatgtatcattactc 23122697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 43414562 - 43414681
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||||||||| |||||||||||||| |||||| || ||||  ||||||||||| |||||||| ||||||||||||||||||| |||||| ||||||    
T  43414562 agagaagaggagagaaaagagaaagtgtgcttgtgcgggatccatgtgaccacgtgttagatttttgtgtgggtgtcaaagggtgtgttgccatctaagg 43414661  T
Q  112 atgtctatgtatcattactc 131  Q
    ||||||||||||||| ||||    
T  43414662 atgtctatgtatcataactc 43414681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 20074923 - 20075034
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    ||||||||| ||||||||||||||||||| |||||||||||||||        |||||| ||||||||||||||||||||| ||||||||||||||||||    
T  20074923 agagaagagaagaggaaagagaaagtgtgcttgtgcagggtccac--------gtgtcacatttttatgtgggtgtcaaagagtgtattgccacctaagg 20075014  T
Q  112 atgtctatgtatcattactc 131  Q
    ||||||||||||||||||||    
T  20075015 atgtctatgtatcattactc 20075034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 12 - 111
Target Start/End: Original strand, 8841413 - 8841512
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    ||||||||||||||||||||||||||||| |||||| |||||||| |||| |||||| |||||||| |||||||||||||||||||| ||||||||||||    
T  8841413 agagaagaggagaggaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtactgccacctaagg 8841512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 12 - 126
Target Start/End: Original strand, 10621068 - 10621182
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||||||||| |||||||||||||| |||||| || || |  || | ||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  10621068 agagaagaggagagaaaagagaaagtgtgcttgtgcgggatcgatgtggctacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaagg 10621167  T
Q  112 atgtctatgtatcat 126  Q
    |||||||||||||||    
T  10621168 atgtctatgtatcat 10621182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 10284612 - 10284731
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||| || ||||||||||||||||| |||||| |||||||| |||| |||||||| |||||| |||||||||||||| |||||||| ||| |||||    
T  10284612 agagaagatgaaaggaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagagtgtattgtcacttaagg 10284711  T
Q  112 atgtctatgtatcattactc 131  Q
     |||||||||||||| ||||    
T  10284712 gtgtctatgtatcataactc 10284731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 15258910 - 15259029
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||||||||||||||||||| |||| ||||||||||||||| ||||||| |||||||||||||||||| |||| | || |||||||||| |||||     
T  15258910 agagaagaggagaggaaagagaaaatgtgcttgtgcagggtccacgtgaccacatgtcagatttttatgtggatgtccagggatgtattgccatctaaga 15259009  T
Q  112 atgtctatgtatcattactc 131  Q
     | |||||||||||| ||||    
T  15259010 gtatctatgtatcataactc 15259029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 16383496 - 16383377
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    ||||||||| ||| ||||||||||||||  |||||| ||||||| ||| |||| |||||||||||| |||||||||||| ||||||||||||||||||||    
T  16383496 agagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagg 16383397  T
Q  112 atgtctatgtatcattactc 131  Q
     ||| |||||||||| ||||    
T  16383396 gtgtttatgtatcataactc 16383377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 44507068 - 44507187
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||| ||||| ||||||||||| || |||| | |||||||| |||| ||||||||||||||| ||||||||| |||| ||||||| ||||||||||    
T  44507068 agagaagatgagagaaaagagaaagtatgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgttaaagagtgtattaccacctaagg 44507167  T
Q  112 atgtctatgtatcattactc 131  Q
     |||||||||||||||||||    
T  44507168 gtgtctatgtatcattactc 44507187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 27 - 131
Target Start/End: Original strand, 15048178 - 15048281
Alignment:
Q  27 aaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcat 126  Q
    |||||||||||||| |||||| |||||||  || | ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  15048178 aaagagaaagtgtgcttgtgcggggtccatgtggctacgtgtcagatttttgtgtgg-tgtcaaagggtgtattgccacctaaggatgtctatgtatcat 15048276  T
Q  127 tactc 131  Q
     ||||    
T  15048277 aactc 15048281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 30479455 - 30479574
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    ||||||||| ||| ||||||||||||||  ||||||  |||||| ||  |||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  30479455 agagaagagaagaagaaagagaaagtgtacttgtgcgaggtccatatagccacatgtcagatttttatgtggatgtcaaagggtgtattgccacctaagg 30479554  T
Q  112 atgtctatgtatcattactc 131  Q
     ||| |||||||||| ||||    
T  30479555 gtgtttatgtatcataactc 30479574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 34307335 - 34307216
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    ||||||||| ||| ||||||||||||||  |||||| |||| || ||| |||| |||||||||||| |||||||||||| ||||||||||||||||||||    
T  34307335 agagaagagaagaagaaagagaaagtgtacttgtgcggggttcatatgtccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagg 34307236  T
Q  112 atgtctatgtatcattactc 131  Q
     ||| |||||||||| ||||    
T  34307235 gtgtttatgtatcataactc 34307216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 16056382 - 16056501
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    ||||||||| ||| ||||||||||||||  |||||| ||||||| ||| |||| |||||||||||| |||||||||||| || ||||||| ||| |||||    
T  16056382 agagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaagggatgtattgtcacataagg 16056481  T
Q  112 atgtctatgtatcattactc 131  Q
    |||| |||||||||| ||||    
T  16056482 atgtttatgtatcataactc 16056501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 24307774 - 24307893
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    ||||||||| ||| ||||||||||||||  |||||| ||||||| ||| |||| | |||||||||| |||||||||||| || |||||||||||||||||    
T  24307774 agagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatatcagatttttgtgtgggtgtcaagggatgtattgccacctaagg 24307873  T
Q  112 atgtctatgtatcattactc 131  Q
     ||| |||||||||| ||||    
T  24307874 gtgtttatgtatcataactc 24307893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 42221634 - 42221515
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||| |||| ||||||||||||||| ||||   ||||||| ||||  ||||||||||||||| |||||||||| | |  ||||||| |||||||||    
T  42221634 agagaagatgagatgaaagagaaagtgtgcttgtatggggtccatatgattacgtgtcagatttttgtgtgggtgtccaggaatgtattgtcacctaagg 42221535  T
Q  112 atgtctatgtatcattactc 131  Q
    |||| |||||||||||||||    
T  42221534 atgtatatgtatcattactc 42221515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 17443944 - 17443825
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    ||||||||| ||| ||||||||||||||  |||||  ||||||||||||| || |||||||||||| |||| |||| ||   |||||||| |||||||||    
T  17443944 agagaagagaagatgaaagagaaagtgtctttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaagg 17443845  T
Q  112 atgtctatgtatcattactc 131  Q
     |||||||||||||| ||||    
T  17443844 ttgtctatgtatcataactc 17443825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 32032843 - 32032725
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    ||||||||| ||  ||||||||||||||  ||||||||| |||| ||| |||| |||||||||||| ||||| |||| |||| |||||||||||||||||    
T  32032843 agagaagagaaggagaaagagaaagtgtacttgtgcaggatccatatggccacatgtcagatttttgtgtggatgtc-aaggatgtattgccacctaagg 32032745  T
Q  112 atgtctatgtatcattactc 131  Q
     ||| |||||||||| ||||    
T  32032744 gtgtttatgtatcataactc 32032725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 12 - 130
Target Start/End: Complemental strand, 9122304 - 9122196
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||||||||| |||||||||||||| |||||| || ||||| |||| || |||||||||||| |||          ||||||||||||||||||||    
T  9122304 agagaagaggagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacatgtcagatttttgtgt----------gggtgtattgccacctaagg 9122215  T
Q  112 atgtctatgtatcattact 130  Q
     ||||||||||||||||||    
T  9122214 gtgtctatgtatcattact 9122196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 38229547 - 38229429
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    ||||||||| |||||||||||||| |||| |||| |||  ||||| ||||||| |||||||||||| |||||||||| | | | |||||||||||||||     
T  38229547 agagaagagaagaggaaagagaaaatgtgcttgtacagaatccacgtgaccacatgtcagatttttgtgtgggtgtc-aggagcgtattgccacctaaga 38229449  T
Q  112 atgtctatgtatcattactc 131  Q
     |||  ||||||||| ||||    
T  38229448 gtgttcatgtatcataactc 38229429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 50 - 131
Target Start/End: Complemental strand, 24307710 - 24307629
Alignment:
Q  50 ggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattactc 131  Q
    |||||| ||| |||| | |||||||||| |||||||||||| || ||||||||||||||||| ||| |||||||||| ||||    
T  24307710 ggtccatatggccacatatcagatttttgtgtgggtgtcaatggatgtattgccacctaagggtgtttatgtatcataactc 24307629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 105
Target Start/End: Original strand, 20148883 - 20148926
Alignment:
Q  61 ccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccac 105  Q
    |||||||||||| |||||||||||||| |||||||||||||||||    
T  20148883 ccacgtgtcagaattttatgtgggtgt-aaagggtgtattgccac 20148926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 79
Target Start/End: Original strand, 42354569 - 42354636
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttat 79  Q
    ||||||||| ||| ||||||||||||||| || ||   | ||||||||| ||||||||||||||||||    
T  42354569 agagaagagaagatgaaagagaaagtgtgcttatgtgagatccacatgaacacgtgtcagatttttat 42354636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 137
Target Start/End: Original strand, 30183939 - 30183981
Alignment:
Q  95 tgtattgccacctaaggatgtctatgtatcattactcgtatga 137  Q
    ||||||||||| ||||||||| ||||||||||||||| |||||    
T  30183939 tgtattgccacgtaaggatgtatatgtatcattactcatatga 30183981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 61 - 102
Target Start/End: Original strand, 3743894 - 3743934
Alignment:
Q  61 ccacgtgtcagatttttatgtgggtgtcaaagggtgtattgc 102  Q
    |||||||||||| |||||||||||||| ||||||||||||||    
T  3743894 ccacgtgtcagaattttatgtgggtgt-aaagggtgtattgc 3743934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 105
Target Start/End: Original strand, 2547119 - 2547162
Alignment:
Q  61 ccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccac 105  Q
    |||||||||||| |||| ||||||||| |||||||||||||||||    
T  2547119 ccacgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 2547162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 131
Target Start/End: Complemental strand, 25838249 - 25838197
Alignment:
Q  79 tgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattactc 131  Q
    ||||| |||||||  |||||||||||||||||||| ||||| |||||| ||||    
T  25838249 tgtggatgtcaaaaagtgtattgccacctaaggatatctatttatcataactc 25838197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 105
Target Start/End: Original strand, 26125757 - 26125800
Alignment:
Q  61 ccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccac 105  Q
    |||||||||||| ||||||| |||||| |||||||||||||||||    
T  26125757 ccacgtgtcagaattttatgcgggtgt-aaagggtgtattgccac 26125800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 105
Target Start/End: Original strand, 29705485 - 29705528
Alignment:
Q  61 ccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccac 105  Q
    |||||||||||| |||| ||||||||| |||||||||||||||||    
T  29705485 ccacgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 29705528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 105
Target Start/End: Complemental strand, 29800927 - 29800884
Alignment:
Q  61 ccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccac 105  Q
    |||| ||||||| |||||||||||||| |||||||||||||||||    
T  29800927 ccacatgtcagaattttatgtgggtgt-aaagggtgtattgccac 29800884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 105
Target Start/End: Complemental strand, 30660719 - 30660676
Alignment:
Q  61 ccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccac 105  Q
    |||||||||||| |||||||||| ||| |||||||||||||||||    
T  30660719 ccacgtgtcagaattttatgtggatgt-aaagggtgtattgccac 30660676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 76
Target Start/End: Complemental strand, 40467819 - 40467755
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttt 76  Q
    |||||||| |||||||||||||||||||| ||||||   |||||| ||  ||| |||||||||||    
T  40467819 agagaagatgagaggaaagagaaagtgtgcttgtgcgaagtccacgtggtcacatgtcagatttt 40467755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 92; Significance: 8e-45; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 8080364 - 8080483
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||||||||| |||||||||||||| |||||| |||||||| |||| ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  8080364 agagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttatgtaggtgtcaaagggtgtattgccacctaagg 8080463  T
Q  112 atgtctatgtatcattactc 131  Q
     |||||||||||||||||||    
T  8080464 gtgtctatgtatcattactc 8080483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 19329961 - 19329842
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||||||||| |||||||||||||| |||||| |||||||| |||  ||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  19329961 agagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgattacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagg 19329862  T
Q  112 atgtctatgtatcattactc 131  Q
    ||||||||||||||||||||    
T  19329861 atgtctatgtatcattactc 19329842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 35137652 - 35137533
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||||||||| |||||||||||||| |||||| |||||||| |||| |||||| |||||||| |||||||||||||||||||||||||||||||||    
T  35137652 agagaagaggagagaaaagagaaagtgtgtttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattgccacctaagg 35137553  T
Q  112 atgtctatgtatcattactc 131  Q
     ||||||| |||||||||||    
T  35137552 gtgtctatttatcattactc 35137533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 38267159 - 38267040
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||||||||| |||||||||||||| |||||| |||||||| |||| ||||||||||||||| ||||||||||||||||||||||| ||| |||||    
T  38267159 agagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtcacataagg 38267060  T
Q  112 atgtctatgtatcattactc 131  Q
     |||||||||||||||||||    
T  38267059 gtgtctatgtatcattactc 38267040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 7389501 - 7389389
Alignment:
Q  19 aggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaaggatgtcta 118  Q
    ||||||| |||||||||||||| |||||| |||||||| |||| ||||||||||||||| |||||||||||||| |||||||||||||||||| ||||||    
T  7389501 aggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaagggtgtcta 7389402  T
Q  119 tgtatcattactc 131  Q
    |||||||||||||    
T  7389401 tgtatcattactc 7389389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 12 - 140
Target Start/End: Complemental strand, 38837336 - 38837208
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||||||||| |||||||||||||| |||||| |||||||| |||| ||||||||||||||| ||| |||||  ||||||||||||||||||||||    
T  38837336 agagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtaggtgtacaagggtgtattgccacctaagg 38837237  T
Q  112 atgtctatgtatcattactcgtatgaaaa 140  Q
     ||||||||||||||||||| | ||||||    
T  38837236 gtgtctatgtatcattactcttttgaaaa 38837208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 35468836 - 35468955
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||||||  ||| | | |||||||||||||||||||||| | |||||||||| ||||||    
T  35468836 agagaagaggataggaaagagaaagtgtgtttgtgcagggtccacatggtcacatattagatttttatgtgggtgtcaaatgatgtattgccatctaagg 35468935  T
Q  112 atgtctatgtatcattactc 131  Q
    ||||||||||||||||||||    
T  35468936 atgtctatgtatcattactc 35468955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 21 - 131
Target Start/End: Complemental strand, 3434672 - 3434562
Alignment:
Q  21 gagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaaggatgtctatg 120  Q
    ||||| |||||||||||||| |||||| || ||||| |||| ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  3434672 gagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagttttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatg 3434573  T
Q  121 tatcattactc 131  Q
    |||||||||||    
T  3434572 tatcattactc 3434562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 12 - 128
Target Start/End: Complemental strand, 3784114 - 3783998
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||||||||| |||||||||||||| |||||| || ||||| |||| ||||||||||||||| ||||||||||||| | |||||||||||||||||    
T  3784114 agagaagaggagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaagatgtattgccacctaagg 3784015  T
Q  112 atgtctatgtatcatta 128  Q
     ||||||||||||||||    
T  3784014 gtgtctatgtatcatta 3783998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 4999495 - 4999614
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||||||||  |||||||||||||| |||||| |||||||| |||| |||| |||||||||| ||||||||||||| |||||||||||| ||||||    
T  4999495 agagaagaggagataaaagagaaagtgtgtttgtgcggggtccacgtgactacgtatcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagg 4999594  T
Q  112 atgtctatgtatcattactc 131  Q
     |||||||||||||||||||    
T  4999595 gtgtctatgtatcattactc 4999614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 22 - 131
Target Start/End: Original strand, 36361904 - 36362013
Alignment:
Q  22 agaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaaggatgtctatgt 121  Q
    |||| |||||||||||||| |||||  |||||||| |||| ||||||||||||||| ||||||||||||||| ||||||||||||||||| |||||||||    
T  36361904 agagaaaagagaaagtgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgccacctaagggtgtctatgt 36362003  T
Q  122 atcattactc 131  Q
    ||||||||||    
T  36362004 atcattactc 36362013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 12 - 136
Target Start/End: Complemental strand, 36208292 - 36208168
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||||||||||||||||||| |||| ||||||||||||||| ||||||| |||||| ||||| |||||||||||| |  |||||| ||||||||||    
T  36208292 agagaagaggagaggaaagagaaaatgtgcttgtgcagggtccacgtgaccacatgtcagctttttgtgtgggtgtcaatgaatgtattaccacctaagg 36208193  T
Q  112 atgtctatgtatcattactcgtatg 136  Q
     |||||||||||||| |||| ||||    
T  36208192 gtgtctatgtatcataactcttatg 36208168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 16 - 131
Target Start/End: Original strand, 19436172 - 19436287
Alignment:
Q  16 aagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaaggatgt 115  Q
    ||||| |||| |||||||||||||| || ||| || ||||| |||| ||||||||||||||| ||||||||||||| ||||||||| |||||||||||||    
T  19436172 aagagaagagaaaagagaaagtgtgcttatgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaaggatgt 19436271  T
Q  116 ctatgtatcattactc 131  Q
    ||||||||||||||||    
T  19436272 ctatgtatcattactc 19436287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 35522995 - 35522881
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||| ||||| |||||||||||||| |||||| || |||| ||| ||||||||||||||||| ||||||||| ||| ||||||||||||| |||||    
T  35522995 agagaagaagagagaaaagagaaagtgtgcttgtgcgggatccatatggccacgtgtcagatttttgtgtgggtgttaaatggtgtattgccacttaagg 35522896  T
Q  112 atgtctatgtatcat 126  Q
    |||||||||||||||    
T  35522895 atgtctatgtatcat 35522881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 22 - 131
Target Start/End: Complemental strand, 36362135 - 36362026
Alignment:
Q  22 agaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaaggatgtctatgt 121  Q
    |||| |||||||||||||| |||||  |||||||| |||| ||||||||||||||| ||||||||||||||| |||||| |||||||||| |||||||||    
T  36362135 agagaaaagagaaagtgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattaccacctaagggtgtctatgt 36362036  T
Q  122 atcattactc 131  Q
    ||||||||||    
T  36362035 atcattactc 36362026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 12 - 128
Target Start/End: Complemental strand, 3694486 - 3694370
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||||||||| |||||||||||||| |||||| || |||||||||| ||||||||||||||| ||||||||| ||| ||||||||| |||||||||    
T  3694486 agagaagaggagagaaaagagaaagtgtgcttgtgcgggatccacatgactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgtcacctaagg 3694387  T
Q  112 atgtctatgtatcatta 128  Q
     ||| ||| ||||||||    
T  3694386 gtgtgtatatatcatta 3694370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 26296763 - 26296644
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||||||||| ||||||||| || | |||||| ||||||| ||| |||||| |||||||||||||||| ||| ||||||| ||||| |||||||||    
T  26296763 agagaagaggagagaaaagagaaaatgcgcttgtgcggggtccatatggccacgtatcagatttttatgtggatgttaaagggtatattgtcacctaagg 26296664  T
Q  112 atgtctatgtatcattactc 131  Q
    ||||||||||||||| ||||    
T  26296663 atgtctatgtatcataactc 26296644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 40957826 - 40957707
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||| ||||| |||||||||||||| |||| | || ||||| |||| ||||||||||||||| ||||||| |||||| |||||||||||||||||     
T  40957826 agagaagatgagagaaaagagaaagtgtgcttgtacgggatccacgtgactacgtgtcagatttttgtgtgggtatcaaagagtgtattgccacctaaga 40957727  T
Q  112 atgtctatgtatcattactc 131  Q
     |||||||||||||||||||    
T  40957726 gtgtctatgtatcattactc 40957707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 46033782 - 46033901
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||||||||| ||||||||| | || |||||| | || ||  |||||||||||||||||||||||||||||| ||||||||||||||||||||||     
T  46033782 agagaagaggagagaaaagagaaaatatgcttgtgcggagttcatgtgaccacgtgtcagatttttatgtgggtgttaaagggtgtattgccacctaaga 46033881  T
Q  112 atgtctatgtatcattactc 131  Q
    || |||||||||||| ||||    
T  46033882 atatctatgtatcataactc 46033901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 8238332 - 8238212
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccaccta-ag 110  Q
    ||||||||| ||| ||||||||||||||  |||||| ||||||| ||||| || |||||||||||| |||||||||||||||||||||||||||||| ||    
T  8238332 agagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatgactacatgtcagatttttgtgtgggtgtcaaagggtgtattgccacctacag 8238233  T
Q  111 gatgtctatgtatcattactc 131  Q
    | ||| |||||||||| ||||    
T  8238232 ggtgtttatgtatcataactc 8238212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 22343480 - 22343361
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    ||||||||| ||| ||||||||||||||  |||||| ||||||| |||  ||| |||||||||||| |||||||||||| ||||||||||||||||||||    
T  22343480 agagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggtcacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagg 22343381  T
Q  112 atgtctatgtatcattactc 131  Q
     ||| |||||||||| ||||    
T  22343380 gtgtttatgtatcataactc 22343361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 32564407 - 32564526
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    ||||||||| ||| ||||||||||||||  |||||| ||||||| ||  |||| |||||||||||| |||||||||||| |||||||||||||||||||     
T  32564407 agagaagagaagaagaaagagaaagtgtatttgtgcggggtccatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaga 32564506  T
Q  112 atgtctatgtatcattactc 131  Q
    |||| |||||||||| ||||    
T  32564507 atgtttatgtatcataactc 32564526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 41915860 - 41915741
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    ||||||||| ||| ||||||||||||||  |||||| ||||||| ||| |||| |||||||||||| ||| |||||||| ||||||||||||||||||||    
T  41915860 agagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtaggtgtcaaggggtgtattgccacctaagg 41915761  T
Q  112 atgtctatgtatcattactc 131  Q
     ||| |||||||||| ||||    
T  41915760 gtgtttatgtatcataactc 41915741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 12 - 130
Target Start/End: Original strand, 32951474 - 32951592
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||||||||| |||||||||||||| |||||| |||||||| |||| |||||| |||||||| ||||| ||| ||||| ||||||| || |||||     
T  32951474 agagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtggatgttaaaggatgtattgtcatctaaga 32951573  T
Q  112 atgtctatgtatcattact 130  Q
     ||||||||||||||||||    
T  32951574 gtgtctatgtatcattact 32951592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 37 - 133
Target Start/End: Original strand, 46374808 - 46374904
Alignment:
Q  37 tgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattactcgt 133  Q
    |||| |||||| |||||||  || ||||||||||||||||| ||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||    
T  46374808 tgtgcttgtgcggggtccatgtggccacgtgtcagatttttgtgtgggtgttaaagggtgtgttgccacctaaggatgtctatgtatcataactcgt 46374904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 10343544 - 10343663
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||||||||||||||||||||||||  | ||||| ||||||   | || ||||||||||||| ||||||||||||   ||||||| ||||||||||    
T  10343544 agagaagaggagaggaaagagaaagtgtgcgtctgcagagtccacggaaacatgtgtcagatttttgtgtgggtgtcaagatgtgtatttccacctaagg 10343643  T
Q  112 atgtctatgtatcattactc 131  Q
     |||||||||||||||||||    
T  10343644 gtgtctatgtatcattactc 10343663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 18207298 - 18207180
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    ||||||||||||| ||||||||||||||| |||||  |||| ||| || |||||||| |||||||| | ||||||||||  |||||||||||||||||||    
T  18207298 agagaagaggagatgaaagagaaagtgtgcttgtgtggggttcacgtg-ccacgtgttagatttttgtatgggtgtcaagaggtgtattgccacctaagg 18207200  T
Q  112 atgtctatgtatcattactc 131  Q
     |||||||||||||| ||||    
T  18207199 ttgtctatgtatcataactc 18207180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 40846094 - 40846213
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    ||||||||| ||| ||||||||||||||  |||||| ||||||| || || || ||| |||||||| ||||| |||||| ||||||||||||||||||||    
T  40846094 agagaagagaagaagaaagagaaagtgtatttgtgcggggtccatataactacatgttagatttttgtgtggatgtcaaggggtgtattgccacctaagg 40846193  T
Q  112 atgtctatgtatcattactc 131  Q
    |||| |||||||||| ||||    
T  40846194 atgtttatgtatcataactc 40846213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 21234513 - 21234401
Alignment:
Q  19 aggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaaggatgtcta 118  Q
    |||||||| |||||||| |||| |||||| |||| ||  || | |||||||| |||||| |||| |||||||||||||||||| ||||||||||||||||    
T  21234513 aggagaggtaagagaaaatgtgcttgtgcggggtacatgtggctacgtgtcaaatttttgtgtgagtgtcaaagggtgtattgtcacctaaggatgtcta 21234414  T
Q  119 tgtatcattactc 131  Q
    |||||||| ||||    
T  21234413 tgtatcataactc 21234401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 7728025 - 7727906
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    ||||||||| ||| |||| |||||||||  |||||| ||||||| |||||||| |||||||||||||||||  ||||||  |||||||| ||||||||||    
T  7728025 agagaagagaagaagaaacagaaagtgtacttgtgcggggtccatatgaccacatgtcagatttttatgtgaatgtcaagaggtgtattaccacctaagg 7727926  T
Q  112 atgtctatgtatcattactc 131  Q
     ||| |||||||||| ||||    
T  7727925 gtgtttatgtatcataactc 7727906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 16 - 131
Target Start/End: Complemental strand, 38044312 - 38044197
Alignment:
Q  16 aagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaaggatgt 115  Q
    ||||| ||| ||||||||||||||  |||||| ||||||| ||| | || |||||||||||| ||||| |||||| |||||||||||||||||||| |||    
T  38044312 aagagaagaagaaagagaaagtgtacttgtgcggggtccatatggctacatgtcagatttttgtgtggatgtcaaggggtgtattgccacctaagggtgt 38044213  T
Q  116 ctatgtatcattactc 131  Q
     |||||||||| ||||    
T  38044212 ttatgtatcataactc 38044197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 39255905 - 39256023
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    ||||||||||||| ||||||||||||||  |||||  | |||||| || ||||||||||||||||| | ||||| ||||  |||||||||||||||||||    
T  39255905 agagaagaggagatgaaagagaaagtgttcttgtgtggagtccacgtg-ccacgtgtcagatttttgtatgggtatcaagtggtgtattgccacctaagg 39256003  T
Q  112 atgtctatgtatcattactc 131  Q
     |||||||||||||| ||||    
T  39256004 ttgtctatgtatcataactc 39256023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 11044297 - 11044188
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||| |||||||||||||||||||  |||||| |||||||| |||| |||||||||          |||||||||||| |||||||||||||||||    
T  11044297 agagaagatgagaggaaagagaaagtgtacttgtgcggggtccacgtgactacgtgtcag----------gggtgtcaaaggatgtattgccacctaagg 11044208  T
Q  112 atgtctatgtatcattactc 131  Q
     |||||||||||||||||||    
T  11044207 gtgtctatgtatcattactc 11044188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 31735996 - 31735884
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||||||||| |||||||||||||| |||||| || ||||  || ||||||||       || ||||||||| |||| ||||||||||||||||||    
T  31735996 agagaagaggagagaaaagagaaagtgtgcttgtgcgggatccatgtggccacgtgt-------ttgtgtgggtgttaaagagtgtattgccacctaagg 31735904  T
Q  112 atgtctatgtatcattactc 131  Q
    ||||||||||||||| ||||    
T  31735903 atgtctatgtatcataactc 31735884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 41423801 - 41423682
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    ||||||||||||| |||||||||| | || |||| | || || || ||||||| |||||||||||| |||  |||||||  |||||||| ||| |||| |    
T  41423801 agagaagaggagatgaaagagaaaatatgcttgtacgggatctacgtgaccacatgtcagatttttgtgtaagtgtcaagaggtgtattaccatctaatg 41423702  T
Q  112 atgtctatgtatcattactc 131  Q
    ||||||||||||||| ||||    
T  41423701 atgtctatgtatcataactc 41423682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 126
Target Start/End: Original strand, 2318224 - 2318338
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||| |||| |||||||||||| || || ||  |||||||| |||||||  ||||||||||| ||||||||||||  ||||| |||||||||| ||    
T  2318224 agagaagatgagatgaaagagaaagtatgcttatgtcgggtccacgtgaccacacgtcagatttttgtgtgggtgtcaagaggtgtcttgccacctatgg 2318323  T
Q  112 atgtctatgtatcat 126  Q
     |||  |||||||||    
T  2318324 ttgttaatgtatcat 2318338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 97
Target Start/End: Original strand, 27744290 - 27744375
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgt 97  Q
    |||||||||||||||| ||||||| |||| || ||  || ||||| || |||| |||||||||||| ||||||| |||||||||||    
T  27744290 agagaagaggagaggatagagaaaatgtgcttatgagggatccacgtggccacatgtcagatttttgtgtgggtatcaaagggtgt 27744375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 12311023 - 12310906
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    ||||||||||| |||||||| ||| |||| |||| |||| ||||| ||||||| |||||||||||| | ||| | || |  | | |||| ||||||||||    
T  12311023 agagaagaggaaaggaaagataaaatgtgcttgttcaggatccacgtgaccacatgtcagatttttgtatggatatcca--gatatatttccacctaagg 12310926  T
Q  112 atgtctatgtatcattactc 131  Q
     |||||||||||||| ||||    
T  12310925 gtgtctatgtatcataactc 12310906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 101
Target Start/End: Original strand, 16374805 - 16374894
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattg 101  Q
    |||||| | |||| ||||||||| ||||| |||||   | ||||| |||||||||||||||||||| ||||| |||||| || |||||||    
T  16374805 agagaaaaagagatgaaagagaatgtgtgcttgtgtgagatccacgtgaccacgtgtcagatttttgtgtggatgtcaagggatgtattg 16374894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 105
Target Start/End: Original strand, 44326301 - 44326344
Alignment:
Q  61 ccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccac 105  Q
    |||||||||||| |||||||||||||| |||||||||||||||||    
T  44326301 ccacgtgtcagaattttatgtgggtgt-aaagggtgtattgccac 44326344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 131
Target Start/End: Complemental strand, 45223110 - 45223042
Alignment:
Q  63 acgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattactc 131  Q
    ||||||||||||||| ||| | |||  |||  ||||||||||||||||||||| ||| |||||||||||    
T  45223110 acgtgtcagatttttgtgtagatgttcaagaatgtattgccacctaaggatgtatatatatcattactc 45223042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 45
Target Start/End: Original strand, 1766762 - 1766795
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgt 45  Q
    ||||||||||||||||||||||||||||| ||||    
T  1766762 agagaagaggagaggaaagagaaagtgtgcttgt 1766795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 105
Target Start/End: Complemental strand, 26898380 - 26898336
Alignment:
Q  60 accacgtgtcagatttttatgtgggtgtcaaagggtgtattgccac 105  Q
    ||||||||||||| |||||||||||||| ||| |||||||||||||    
T  26898380 accacgtgtcagaattttatgtgggtgt-aaaaggtgtattgccac 26898336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 140
Target Start/End: Complemental strand, 31741074 - 31741034
Alignment:
Q  100 tgccacctaaggatgtctatgtatcattactcgtatgaaaa 140  Q
    ||||||||||||  |||||||||||||||||| ||||||||    
T  31741074 tgccacctaaggtggtctatgtatcattactcatatgaaaa 31741034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 105
Target Start/End: Complemental strand, 32029794 - 32029751
Alignment:
Q  61 ccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccac 105  Q
    |||||||||||| |||| ||||||||| |||||||||||||||||    
T  32029794 ccacgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 32029751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 92; Significance: 8e-45; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 24699935 - 24700054
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    ||||||||||||||||||||||||||||| |||| |||||||||| || ||||||| ||||||||||||||||||||||| |||||||||||| ||||||    
T  24699935 agagaagaggagaggaaagagaaagtgtgtttgtacagggtccacgtggccacgtgccagatttttatgtgggtgtcaaaaggtgtattgccaactaagg 24700034  T
Q  112 atgtctatgtatcattactc 131  Q
    ||||||||||||||||||||    
T  24700035 atgtctatgtatcattactc 24700054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 53982130 - 53982011
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||||||||| |||||||||||||| |||||| |||||||| |||| ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  53982130 agagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagg 53982031  T
Q  112 atgtctatgtatcattactc 131  Q
     |||||||||||||||||||    
T  53982030 gtgtctatgtatcattactc 53982011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 33644319 - 33644200
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||||||||| |||||||||||||| |||||| |||||||| |||| ||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  33644319 agagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacccaagg 33644220  T
Q  112 atgtctatgtatcattactc 131  Q
     |||||||||||||||||||    
T  33644219 gtgtctatgtatcattactc 33644200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 12 - 132
Target Start/End: Complemental strand, 8076512 - 8076392
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    ||||||||||||||||||||||||||||| |||||| |||||||| |||| |||||| |||||||| |||||||||||||||||||| ||||||||||||    
T  8076512 agagaagaggagaggaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtactgccacctaagg 8076413  T
Q  112 atgtctatgtatcattactcg 132  Q
     ||| ||||||||||||||||    
T  8076412 gtgtttatgtatcattactcg 8076392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 14623820 - 14623939
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    ||||||||| ||| ||||||||||||||| |||||   ||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  14623820 agagaagagaagatgaaagagaaagtgtgcttgtgtgaggtccacatgaacacatgtcagatttttatgtgggtgtcaaggggtgtattgccacctaagg 14623919  T
Q  112 atgtctatgtatcattactc 131  Q
    ||||||||||||||||||||    
T  14623920 atgtctatgtatcattactc 14623939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 35536745 - 35536626
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    ||||||||| ||| ||||||| ||||||| ||||| | ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| |||||    
T  35536745 agagaagagaagatgaaagaggaagtgtgcttgtgtaaggtccacatgaccacgtgtcacatttttatgtgggtgtcaaatggtgtattgccacataagg 35536646  T
Q  112 atgtctatgtatcattactc 131  Q
    ||||||||||||||||||||    
T  35536645 atgtctatgtatcattactc 35536626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 54868876 - 54868995
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||| ||||| ||||||||||||||||||||| |||||||| | || ||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  54868876 agagaagatgagagaaaagagaaagtgtgattgtgcggggtccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagg 54868975  T
Q  112 atgtctatgtatcattactc 131  Q
     |||||||||||||||||||    
T  54868976 gtgtctatgtatcattactc 54868995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 31456804 - 31456690
Alignment:
Q  16 aagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaaggatgt 115  Q
    |||||||||| |||||||||||||| |||||| ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||| || |||    
T  31456804 aagaggagagaaaagagaaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccgcctatgggtgt 31456705  T
Q  116 ctatgtatcattact 130  Q
    |||||||||||||||    
T  31456704 ctatgtatcattact 31456690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 14 - 131
Target Start/End: Original strand, 26141515 - 26141632
Alignment:
Q  14 agaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaaggat 113  Q
    |||||||||||| |||||||||||||| |||||  |||||||  |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  26141515 agaagaggagagaaaagagaaagtgtgcttgtgtggggtccatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtgtattgccacctaaggat 26141614  T
Q  114 gtctatgtatcattactc 131  Q
    ||||||||||||| ||||    
T  26141615 gtctatgtatcataactc 26141632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 8956881 - 8956762
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    ||||||||| ||| ||||||| ||||||| ||||| | ||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||| |||||    
T  8956881 agagaagagaagatgaaagaggaagtgtgcttgtgtaaggtccacatgaacacgtgtcacatttttatgtgggtgtcaaaggatgtattgccacataagg 8956782  T
Q  112 atgtctatgtatcattactc 131  Q
    ||||||||||||||||||||    
T  8956781 atgtctatgtatcattactc 8956762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 16 - 131
Target Start/End: Complemental strand, 49607529 - 49607414
Alignment:
Q  16 aagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaaggatgt 115  Q
    |||||||||| |||||||||||||| |||||  || ||||| |||| ||||||||||||||| ||||||||||||||||||||||||||||||||| |||    
T  49607529 aagaggagagaaaagagaaagtgtgcttgtgtgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgt 49607430  T
Q  116 ctatgtatcattactc 131  Q
    ||||||||||||||||    
T  49607429 ctatgtatcattactc 49607414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 12 - 130
Target Start/End: Original strand, 13898036 - 13898154
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    ||||||||| ||| ||||||||||||||| |||||   ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  13898036 agagaagagaagatgaaagagaaagtgtgcttgtgtgaggtccacatgaacacgtgtcagatttttatgtgggtgtcaaggggtgtattgccacctaagg 13898135  T
Q  112 atgtctatgtatcattact 130  Q
    |||| ||| ||||||||||    
T  13898136 atgtttatctatcattact 13898154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 52629419 - 52629305
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||| ||||| |||||||||||||| |||| | |||||||| |||| ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  52629419 agagaagatgagagaaaagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagg 52629320  T
Q  112 atgtctatgtatcat 126  Q
     ||||||||||||||    
T  52629319 gtgtctatgtatcat 52629305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 11347903 - 11348022
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||||||||| |||||||||||||| || |||||||||||  || ||||||||||||||||| ||||| ||||||||| ||||||| |||||||||    
T  11347903 agagaagaggagagaaaagagaaagtgtgcttatgcagggtccatgtggccacgtgtcagatttttgtgtggatgtcaaaggatgtattgtcacctaagg 11348002  T
Q  112 atgtctatgtatcattactc 131  Q
    ||||||||||||||| ||||    
T  11348003 atgtctatgtatcataactc 11348022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 28 - 131
Target Start/End: Original strand, 27714888 - 27714991
Alignment:
Q  28 aagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcatt 127  Q
    ||||||||||||| |||||| ||||||||||||| ||||||||||||||| |||||||||||||||||||||| |||||||| | |||||||||||||||    
T  27714888 aagagaaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaaaggtgtctatgtatcatt 27714987  T
Q  128 actc 131  Q
    ||||    
T  27714988 actc 27714991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 14 - 131
Target Start/End: Original strand, 41189747 - 41189864
Alignment:
Q  14 agaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaaggat 113  Q
    |||||||||||| |||||||||||||| |||||| |||||||  || |||||||||| |||||||||||||||||||| | |||||||||||||||||||    
T  41189747 agaagaggagagaaaagagaaagtgtgcttgtgcggggtccatgtggccacgtgtcaaatttttatgtgggtgtcaaatgatgtattgccacctaaggat 41189846  T
Q  114 gtctatgtatcattactc 131  Q
    || |||||||||| ||||    
T  41189847 gtatatgtatcataactc 41189864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 17470524 - 17470405
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||| ||||| |||||||||||||| |||||  |||||||| |||| ||||||||||||||| ||||||||| ||| ||||||||||||||||| |    
T  17470524 agagaagatgagagaaaagagaaagtgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccacctaaag 17470425  T
Q  112 atgtctatgtatcattactc 131  Q
     |||||||||||||||||||    
T  17470424 gtgtctatgtatcattactc 17470405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 26754814 - 26754700
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||||||||||||||||||| |||| |||||| |||||||  ||||||| |||||||||||| ||||| |||| ||||||||||||||||||||||    
T  26754814 agagaagaggagaggaaagagaaaatgtgcttgtgcggggtccatgtgaccacatgtcagatttttgtgtggatgtccaagggtgtattgccacctaagg 26754715  T
Q  112 atgtctatgtatcat 126  Q
     |||||||| |||||    
T  26754714 gtgtctatgaatcat 26754700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 22 - 131
Target Start/End: Original strand, 11095346 - 11095453
Alignment:
Q  22 agaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaaggatgtctatgt 121  Q
    |||| |||||||||||||| || ||| ||||  || |||| ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||    
T  11095346 agagaaaagagaaagtgtgtttatgcggggt--acgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgt 11095443  T
Q  122 atcattactc 131  Q
    ||||||||||    
T  11095444 atcattactc 11095453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 21 - 127
Target Start/End: Original strand, 48587081 - 48587187
Alignment:
Q  21 gagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaaggatgtctatg 120  Q
    ||||| |||||||||||||  |||||| || ||||| |||| ||||||||||||||||||| ||||||||||||||||||||||||||||| | ||||||    
T  48587081 gagagaaaagagaaagtgtacttgtgcgggatccacgtgactacgtgtcagatttttatgtaggtgtcaaagggtgtattgccacctaagggtatctatg 48587180  T
Q  121 tatcatt 127  Q
    |||||||    
T  48587181 tatcatt 48587187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 18 - 131
Target Start/End: Original strand, 33118838 - 33118951
Alignment:
Q  18 gaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaaggatgtct 117  Q
    ||||||||||||||||||||||| || ||  || ||||| |||| |||||||| |||||| ||||||||||||||||||||||| ||||||||| |||||    
T  33118838 gaggagaggaaagagaaagtgtgtttctgagggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgtcacctaagggtgtct 33118937  T
Q  118 atgtatcattactc 131  Q
    ||||||||| ||||    
T  33118938 atgtatcataactc 33118951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 12 - 133
Target Start/End: Complemental strand, 41080826 - 41080707
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    ||||||||||||| |||||||||| |||| |||||  |||||||||||||||| | ||||||||||  |||||||||||||||||| |||| | ||||||    
T  41080826 agagaagaggagatgaaagagaaaatgtgcttgtgt-gggtccacatgaccacatatcagatttttgcgtgggtgtcaaagggtgttttgcta-ctaagg 41080729  T
Q  112 atgtctatgtatcattactcgt 133  Q
    ||||||||||||||||||||||    
T  41080728 atgtctatgtatcattactcgt 41080707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 12 - 133
Target Start/End: Original strand, 51419341 - 51419462
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||| ||||||| |||||||||||||| |||||| ||||| |  || ||||||||||||||||| ||||||||| ||||| ||||||| || ||||||    
T  51419341 agagaataggagagaaaagagaaagtgtgcttgtgcggggtctatgtggccacgtgtcagatttttgtgtgggtgttaaaggatgtattgtcatctaagg 51419440  T
Q  112 atgtctatgtatcattactcgt 133  Q
    ||||||||||||||| ||||||    
T  51419441 atgtctatgtatcataactcgt 51419462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 12 - 132
Target Start/End: Complemental strand, 47531984 - 47531864
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||| ||||||| |||||||||||||| |||||| |||| || ||| |||||||||||||| || ||||| ||| ||| |||||||||||| ||||||    
T  47531984 agagaataggagagaaaagagaaagtgtgcttgtgcggggttcatatggccacgtgtcagattcttgtgtggatgttaaaaggtgtattgccatctaagg 47531885  T
Q  112 atgtctatgtatcattactcg 132  Q
    ||||||||||||||| |||||    
T  47531884 atgtctatgtatcataactcg 47531864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 9563118 - 9562999
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||||||||| | |||||||||||| ||||||||| ||||| |||| ||||||||||||||||| ||| ||||||||| ||||||| || |||| |    
T  9563118 agagaagaggagagaagagagaaagtgtgtttgtgcaggatccacgtgactacgtgtcagatttttatatggatgtcaaaggttgtattgtcatctaatg 9563019  T
Q  112 atgtctatgtatcattactc 131  Q
     ||| |||||||||||||||    
T  9563018 gtgtttatgtatcattactc 9562999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 20764896 - 20765015
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||| ||||| |||||||||||||| |||| | |||||||  || ||||||||||||||||| ||||||||| |||| ||||||| ||||||||||    
T  20764896 agagaagatgagagaaaagagaaagtgtgcttgtacggggtccatgtggccacgtgtcagatttttgtgtgggtgttaaagagtgtattaccacctaagg 20764995  T
Q  112 atgtctatgtatcattactc 131  Q
    |||||||||| |||| ||||    
T  20764996 atgtctatgtctcataactc 20765015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 12 - 127
Target Start/End: Original strand, 30801714 - 30801829
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||| ||||||||||||||| |||| |||||  ||||||| ||||| || ||||| |||||| ||||||| ||||||||||||||  |||||||||    
T  30801714 agagaagatgagaggaaagagaaaatgtgcttgtgtggggtccatatgactacatgtcatatttttgtgtgggtatcaaagggtgtattatcacctaagg 30801813  T
Q  112 atgtctatgtatcatt 127  Q
     |||||||||||||||    
T  30801814 gtgtctatgtatcatt 30801829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 45058534 - 45058652
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    ||||||||| ||| |||||||||||| |  |||||| ||||||| |||  ||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  45058534 agagaagagaagaagaaagagaaagtatacttgtgcggggtccatatggtcacatgtcagatttttatgtgggtgtc-aagggtgtattgccacctaagg 45058632  T
Q  112 atgtctatgtatcattactc 131  Q
     ||| |||||||||| ||||    
T  45058633 gtgtttatgtatcataactc 45058652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 16 - 131
Target Start/End: Original strand, 35965767 - 35965874
Alignment:
Q  16 aagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaaggatgt 115  Q
    ||||||||||||||||||||||||| ||||||||| |||||        ||||||||||||||||||||||||||||| ||||||  ||| |||||||||    
T  35965767 aagaggagaggaaagagaaagtgtgcttgtgcaggatccac--------gtgtcagatttttatgtgggtgtcaaaggatgtattatcacttaaggatgt 35965858  T
Q  116 ctatgtatcattactc 131  Q
     |||||||||||||||    
T  35965859 atatgtatcattactc 35965874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 14 - 131
Target Start/End: Complemental strand, 11907488 - 11907371
Alignment:
Q  14 agaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaaggat 113  Q
    |||||||||||| ||||||||| |||| |||||| ||||||| |||||||| |||||||||||| |||| ||||  | | |||||||| ||||||||| |    
T  11907488 agaagaggagagaaaagagaaaatgtgcttgtgcggggtccatatgaccacatgtcagatttttgtgtgagtgttcaggtgtgtattgtcacctaagggt 11907389  T
Q  114 gtctatgtatcattactc 131  Q
    ||||||||||||| ||||    
T  11907388 gtctatgtatcataactc 11907371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 36707409 - 36707524
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||||||||| ||||||||||||||     || || ||||| | || ||||||||||||||| ||||| ||||||||||||||||| |||||||||    
T  36707409 agagaagaggagagaaaagagaaagtgtgc----gcgggatccacgtaactacgtgtcagatttttgtgtggatgtcaaagggtgtattgtcacctaagg 36707504  T
Q  112 atgtctatgtatcattactc 131  Q
     | |||||||||||||||||    
T  36707505 gtatctatgtatcattactc 36707524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 12 - 128
Target Start/End: Original strand, 25407128 - 25407245
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcaga-tttttatgtgggtgtcaaagggtgtattgccacctaag 110  Q
    ||||||||||||| ||||||||||||||| |||||  || |||| |||| ||||||||||| ||||| |||| ||||||| |||| |||||||||||| |    
T  25407128 agagaagaggagatgaaagagaaagtgtgtttgtgtgggatccatatgatcacgtgtcagattttttgtgtgtgtgtcaaggggtatattgccacctatg 25407227  T
Q  111 gatgtctatgtatcatta 128  Q
    | ||| ||||||||||||    
T  25407228 gttgtgtatgtatcatta 25407245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 12 - 109
Target Start/End: Original strand, 36331310 - 36331407
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaa 109  Q
    ||||||||| ||| ||||||||||||||  |||||| ||||||| ||| |||| |||||||||||| |||||||||||| ||||| ||||||||||||    
T  36331310 agagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgcattgccacctaa 36331407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 12 - 123
Target Start/End: Complemental strand, 39670130 - 39670019
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||||||||| |||||| |||||||  ||| |  ||||||||||| ||||||||| |||||||| | | |||||| || | ||||||||| |||||    
T  39670130 agagaagaggagagaaaagaggaagtgtgcgtgtacgaggtccacatgatcacgtgtcaaatttttatatagatgtcaagggatatattgccacataagg 39670031  T
Q  112 atgtctatgtat 123  Q
    ||||||||||||    
T  39670030 atgtctatgtat 39670019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 48375687 - 48375806
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||||||||||||||||||| |||| |||||| |||||||  |||||||  ||||||||||| | ||| | |  | |||||||||| |||||||||    
T  48375687 agagaagaggagaggaaagagaaaatgtgcttgtgcggggtccatgtgaccacacgtcagatttttgtatggattttcaggggtgtattgtcacctaagg 48375786  T
Q  112 atgtctatgtatcattactc 131  Q
     |||||||| ||||| ||||    
T  48375787 gtgtctatgaatcataactc 48375806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 1758437 - 1758558
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaa--agggtgtattgccacctaa 109  Q
    ||||||||||||| |||||||||| |||| |||||  | |||||| | ||||  |||||||||||| ||||||||||||   ||||||||||| |||||     
T  1758437 agagaagaggagatgaaagagaaaatgtgtttgtgtggagtccacgtaaccatatgtcagatttttgtgtgggtgtcaaggggggtgtattgcaacctat 1758536  T
Q  110 ggatgtctatgtatcattactc 131  Q
    || || ||||||||||| ||||    
T  1758537 ggttgactatgtatcataactc 1758558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 42823230 - 42823116
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    ||||||||| | | |||||||||||| |  || ||| ||||||| |||||||| ||||| |||||| |||||||||||| ||||||||| |||| ||| |    
T  42823230 agagaagagaataagaaagagaaagtatacttatgcggggtccatatgaccacatgtcaaatttttttgtgggtgtcaaggggtgtattaccacataatg 42823131  T
Q  112 atgtctatgtatcat 126  Q
     ||| ||||||||||    
T  42823130 gtgtttatgtatcat 42823116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 28 - 124
Target Start/End: Complemental strand, 35093688 - 35093592
Alignment:
Q  28 aagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatc 124  Q
    ||||||||||||| ||||   | || ||||||||||| ||||||||||||  |||| ||||||| | ||||||| ||||||| | ||||||||||||    
T  35093688 aagagaaagtgtgcttgtatggagttcacatgaccacatgtcagatttttgcgtggatgtcaaatgttgtattgtcacctaaagttgtctatgtatc 35093592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 131
Target Start/End: Original strand, 21746213 - 21746283
Alignment:
Q  63 acgtgtcagatttttatgtggg--tgtcaaagggtgtattgccacctaaggatgtctatgtatcattactc 131  Q
    ||||||||||||||| ||||||  |||| | |  ||||||||||||||||||||| |||||||||||||||    
T  21746213 acgtgtcagatttttgtgtgggggtgtccaggaatgtattgccacctaaggatgtatatgtatcattactc 21746283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 25395318 - 25395428
Alignment:
Q  16 aagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaaggatgt 115  Q
    ||||| ||| |||||||||| |||| |||||  ||||| | ||  |||| |||||||||||| ||||||| | || || ||||| ||||| |||||||||    
T  25395318 aagagaagatgaaagagaaaatgtgtttgtgtggggtctatatagccacatgtcagatttttgtgtgggtattaagggatgtatggccacataaggatgt 25395417  T
Q  116 ctatgtatcat 126  Q
     ||||||||||    
T  25395418 ttatgtatcat 25395428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 122
Target Start/End: Complemental strand, 43745814 - 43745755
Alignment:
Q  63 acgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaaggatgtctatgta 122  Q
    |||||||| ||||||| |||| |||||||| |||||||||||| ||||||| | ||||||    
T  43745814 acgtgtcaaatttttacgtggatgtcaaagagtgtattgccacttaaggatatttatgta 43745755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 105
Target Start/End: Original strand, 42100811 - 42100854
Alignment:
Q  61 ccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccac 105  Q
    |||||||||||| |||||||||||||| |||||||| ||||||||    
T  42100811 ccacgtgtcagaattttatgtgggtgt-aaagggtgcattgccac 42100854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 105
Target Start/End: Complemental strand, 45126917 - 45126862
Alignment:
Q  49 gggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccac 105  Q
    ||||||| || ||||| || |||| |||||||||||||| |||||||||||||||||    
T  45126917 gggtccagattaccacatgccagaattttatgtgggtgt-aaagggtgtattgccac 45126862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 105
Target Start/End: Original strand, 46941176 - 46941219
Alignment:
Q  61 ccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccac 105  Q
    |||||||||||| |||||||||||||| |||| ||||||||||||    
T  46941176 ccacgtgtcagaattttatgtgggtgt-aaagagtgtattgccac 46941219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 105
Target Start/End: Complemental strand, 53581835 - 53581792
Alignment:
Q  61 ccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccac 105  Q
    |||||||||||| |||| ||||||||| |||||||||||||||||    
T  53581835 ccacgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 53581792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 92; Significance: 8e-45; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 9474857 - 9474976
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||||||||| |||||||||||||| |||||| |||||||| |||| ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  9474857 agagaagaggagagaaaagagaaagtgtgtttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagg 9474956  T
Q  112 atgtctatgtatcattactc 131  Q
     |||||||||||||||||||    
T  9474957 gtgtctatgtatcattactc 9474976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 2582034 - 2581915
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||||||||| ||| |||||||||| |||||| |||||||| |||| ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  2582034 agagaagaggagagaaaaaagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagg 2581935  T
Q  112 atgtctatgtatcattactc 131  Q
     |||||||||||||||||||    
T  2581934 gtgtctatgtatcattactc 2581915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 27564716 - 27564835
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||||||||| |||||||||||||| |||||| |||||||| |||  ||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  27564716 agagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgattacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagg 27564815  T
Q  112 atgtctatgtatcattactc 131  Q
    ||||||||||||||||||||    
T  27564816 atgtctatgtatcattactc 27564835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 32813366 - 32813247
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||||||||| |||||||||||||| |||||| |||||||  |||||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  32813366 agagaagaggagagaaaagagaaagtgtgcttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtgtattgccacctaagg 32813267  T
Q  112 atgtctatgtatcattactc 131  Q
    ||||||||||||||| ||||    
T  32813266 atgtctatgtatcataactc 32813247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 51898664 - 51898783
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||||||||||||| |||||||||| |||||| || ||||| |||| ||||||||||||||| ||||||||||||||||||||||||||||||| |    
T  51898664 agagaagaggagaggaaatagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaag 51898763  T
Q  112 atgtctatgtatcattactc 131  Q
    ||||||||||||||||||||    
T  51898764 atgtctatgtatcattactc 51898783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 12 - 132
Target Start/End: Complemental strand, 3000438 - 3000318
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||| ||||| |||||||||||||| |||| | |||||||| |||| ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  3000438 agagaagatgagagaaaagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagg 3000339  T
Q  112 atgtctatgtatcattactcg 132  Q
     ||| ||||||||||||||||    
T  3000338 gtgtttatgtatcattactcg 3000318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 16 - 131
Target Start/End: Original strand, 8346373 - 8346488
Alignment:
Q  16 aagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaaggatgt 115  Q
    |||||||||| |||||||||||||| ||||||||||||||| |||| ||||||||||||||| ||||||||||||| ||||||||||||||||| | ||     
T  8346373 aagaggagagaaaagagaaagtgtgcttgtgcagggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaaggtga 8346472  T
Q  116 ctatgtatcattactc 131  Q
    ||||||||||||||||    
T  8346473 ctatgtatcattactc 8346488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 47452301 - 47452420
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||||||||| |||||||||||||| |||||| || ||||| |||| |||||| |||||||| |||||||||||||||||||||| ||||||||||    
T  47452301 agagaagaggagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattaccacctaagg 47452400  T
Q  112 atgtctatgtatcattactc 131  Q
     |||||||||||||||||||    
T  47452401 gtgtctatgtatcattactc 47452420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 12 - 128
Target Start/End: Original strand, 44548357 - 44548473
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||| ||||| |||||||||||||| |||||| |||||||| |||| ||||||||||||||| ||||||| ||||| ||||||||||||||||| |    
T  44548357 agagaagaagagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaatggtgtattgccacctaaag 44548456  T
Q  112 atgtctatgtatcatta 128  Q
    |||||||||||||||||    
T  44548457 atgtctatgtatcatta 44548473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 23597072 - 23597191
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||| ||||||| ||||| |||||||| ||||||| |||| || || ||||||||||||||||||||||||| |||||| |||||||||||||||| |    
T  23597072 agagaataggagagaaaagataaagtgtgtttgtgcaaggtcaacgtggccacgtgtcagatttttatgtgggtatcaaagagtgtattgccacctaatg 23597171  T
Q  112 atgtctatgtatcattactc 131  Q
    ||||||||||||||||||||    
T  23597172 atgtctatgtatcattactc 23597191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 37649317 - 37649198
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||||||||| |||| ||||||||| |||||| |  | ||| |||||||||||||||||||| |||||||||||||| |||||||||||||||| |    
T  37649317 agagaagaggagagaaaagggaaagtgtgcttgtgcggaattcacgtgaccacgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaaag 37649218  T
Q  112 atgtctatgtatcattactc 131  Q
    ||||||||||||||||||||    
T  37649217 atgtctatgtatcattactc 37649198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 38595273 - 38595154
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||| ||||| |||||||||||||| |||| | |||||||| |||| ||||||||||||||| ||||||||||||||||||||||||||||||| |    
T  38595273 agagaagatgagagaaaagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaag 38595174  T
Q  112 atgtctatgtatcattactc 131  Q
     ||| |||||||||||||||    
T  38595173 gtgtttatgtatcattactc 38595154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 38632302 - 38632421
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||||||||| ||||| |||||||| |||||| |||||||| |||| ||||||||||||||| ||||| ||| ||| |||||||||||||||||||    
T  38632302 agagaagaggagagaaaagaaaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgttaaaaggtgtattgccacctaagg 38632401  T
Q  112 atgtctatgtatcattactc 131  Q
     |||||||||||||||||||    
T  38632402 gtgtctatgtatcattactc 38632421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 48716263 - 48716382
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    ||||||||||| || ||||| |||||||| |||||| |||||||| |||| ||||||||||||||| ||||| ||||||| |||||||||||||||||||    
T  48716263 agagaagaggaaagaaaagataaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgtcaaatggtgtattgccacctaagg 48716362  T
Q  112 atgtctatgtatcattactc 131  Q
     |||||||||||||||||||    
T  48716363 gtgtctatgtatcattactc 48716382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 50630577 - 50630458
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||||||||| |||||||||||||| |||||| |||||||| |||| ||||||||||||||| |||||||  |||||| |||||||||||||||||    
T  50630577 agagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtaacaaaggatgtattgccacctaagg 50630478  T
Q  112 atgtctatgtatcattactc 131  Q
     | |||||||||||||||||    
T  50630477 gtatctatgtatcattactc 50630458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 41758924 - 41758805
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||||||||| |||||||||||||| |||||| |||||||  |||| ||||||||||||||| ||||| ||||||||||||||||||||  ||| |    
T  41758924 agagaagaggagagaaaagagaaagtgtgtttgtgcggggtccatgtgactacgtgtcagatttttgtgtggttgtcaaagggtgtattgccatttaatg 41758825  T
Q  112 atgtctatgtatcattactc 131  Q
     |||||||||||||||||||    
T  41758824 gtgtctatgtatcattactc 41758805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 12 - 130
Target Start/End: Original strand, 11152359 - 11152476
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||||||||||||| |||||| ||| |||||| ||||| ||||||| ||||||||||||||| ||||| |||| ||||||||||||||||||||||    
T  11152359 agagaagaggagaggaaaaagaaagcgtgcttgtgcggggtctacatgactacgtgtcagatttttgtgtggatgtcgaagggtgtattgccacctaagg 11152458  T
Q  112 atgtctatgtatcattact 130  Q
     ||||||||| ||||||||    
T  11152459 -tgtctatgtttcattact 11152476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 43251 - 43132
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    ||||| |||||||| |||||||||||||| |||||| | |||||| |||| ||||||||||||||| ||||||||||||||| ||||||| | ||||||     
T  43251 agagaggaggagagaaaagagaaagtgtgcttgtgcggagtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgtctcctaaga 43152  T
Q  112 atgtctatgtatcattactc 131  Q
     |||||||||||||||||||    
T  43151 ctgtctatgtatcattactc 43132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 50590981 - 50591100
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    ||||||||| ||| ||||||||||||||  |||||| ||||||| ||| |||| |||||||||||| |||||||||||| ||||||||||||||||||||    
T  50590981 agagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagg 50591080  T
Q  112 atgtctatgtatcattactc 131  Q
     ||| |||||||||| ||||    
T  50591081 gtgtttatgtatcataactc 50591100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 5958981 - 5959100
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    ||||||||| ||| ||||||||||||||  |||||| ||||||| |||||||| |||||||||||| ||||||||||||  ||||||||||||| |||||    
T  5958981 agagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatgaccacatgtcagatttttgtgtgggtgtcaagaggtgtattgccacttaagg 5959080  T
Q  112 atgtctatgtatcattactc 131  Q
     ||| |||||||||| ||||    
T  5959081 gtgtttatgtatcataactc 5959100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 41608474 - 41608593
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    ||||||||| ||| ||||||||||||||  |||| | ||||||| ||| |||| |||||||||||| |||| ||||||| ||||||||||||||||||||    
T  41608474 agagaagagaagaagaaagagaaagtgtacttgtacggggtccatatggccacatgtcagatttttgtgtgagtgtcaaggggtgtattgccacctaagg 41608573  T
Q  112 atgtctatgtatcattactc 131  Q
    |||| |||||||||| ||||    
T  41608574 atgtttatgtatcataactc 41608593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 49811508 - 49811627
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||||||||| |||||||||||||| |||||| | ||| | ||| | ||||||||||||||| ||||| ||||||| ||||||||| |||||||||    
T  49811508 agagaagaggagagaaaagagaaagtgtgcttgtgcggagtctatatggctacgtgtcagatttttgtgtggatgtcaaatggtgtattgtcacctaagg 49811607  T
Q  112 atgtctatgtatcattactc 131  Q
    |||||||| |||||| ||||    
T  49811608 atgtctatctatcataactc 49811627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 6260989 - 6260870
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    ||||||||||||| |||| ||||| |||| || ||| |||||||| ||||||| ||| ||||||||||||||||||  | ||||||||| ||||||||||    
T  6260989 agagaagaggagaagaaatagaaaatgtgcttatgcggggtccacgtgaccacatgttagatttttatgtgggtgttcaggggtgtattaccacctaagg 6260890  T
Q  112 atgtctatgtatcattactc 131  Q
    || ||||| |||||| ||||    
T  6260889 atatctatctatcataactc 6260870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 37926419 - 37926538
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    ||||||||| |||| |||||||||||||  |||| | || ||||  || ||||||||||||||||||||||||||| ||| | ||||||||||||||| |    
T  37926419 agagaagagaagagaaaagagaaagtgtacttgtacgggatccatgtggccacgtgtcagatttttatgtgggtgttaaaagatgtattgccacctaaag 37926518  T
Q  112 atgtctatgtatcattactc 131  Q
    || |||||||||||| ||||    
T  37926519 atatctatgtatcataactc 37926538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 21 - 128
Target Start/End: Complemental strand, 26274542 - 26274435
Alignment:
Q  21 gagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaaggatgtctatg 120  Q
    ||||| ||||| |||||||  ||||||||| ||||| |||| | ||||||||||||| ||||| ||||||| | ||||||||||| ||||| ||||||||    
T  26274542 gagagaaaagaaaaagtgtacttgtgcaggatccacgtgactatgtgtcagatttttctgtggatgtcaaatgatgtattgccacataagggtgtctatg 26274443  T
Q  121 tatcatta 128  Q
    ||||||||    
T  26274442 tatcatta 26274435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 21 - 124
Target Start/End: Complemental strand, 26440844 - 26440741
Alignment:
Q  21 gagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaaggatgtctatg 120  Q
    ||||| |||||||||||||| || ||| || ||||  || ||||||||||||||||| ||||||||| ||||||||||||| || ||||||||||||||     
T  26440844 gagagaaaagagaaagtgtgcttatgcgggatccatgtggccacgtgtcagatttttgtgtgggtgttaaagggtgtattgtcatctaaggatgtctatc 26440745  T
Q  121 tatc 124  Q
    ||||    
T  26440744 tatc 26440741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 45044541 - 45044660
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    ||||||||| |||| ||||||||| |||| |||||| |||||||  || | || |||||||||||| | ||||||||||| |||||||||||||||||||    
T  45044541 agagaagagaagagaaaagagaaaatgtgtttgtgcggggtccatgtggctacatgtcagatttttgtatgggtgtcaaatggtgtattgccacctaagg 45044640  T
Q  112 atgtctatgtatcattactc 131  Q
    |  | |||||||||| ||||    
T  45044641 aaatgtatgtatcataactc 45044660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 47748561 - 47748443
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    ||||||||| ||| |||||||||||| |  |||||| || |||| ||| |||| |||||||||||||| |||||||| ||||||||||||||||||||||    
T  47748561 agagaagagaagaagaaagagaaagtatacttgtgcgggatccatatggccacatgtcagatttttatatgggtgtc-aagggtgtattgccacctaagg 47748463  T
Q  112 atgtctatgtatcattactc 131  Q
     | | |||||||||| ||||    
T  47748462 gtatttatgtatcataactc 47748443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 3302514 - 3302633
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||| |||| |||| |||||||||| ||||   ||||||| ||||  ||||||||||||||| |||||||||| | |  | ||||| |||||||||    
T  3302514 agagaagatgagatgaaaaagaaagtgtgcttgtatggggtccatatgattacgtgtcagatttttgtgtgggtgtccaggaatatattgtcacctaagg 3302613  T
Q  112 atgtctatgtatcattactc 131  Q
    |||| |||||||||||||||    
T  3302614 atgtatatgtatcattactc 3302633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 44454098 - 44453984
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||| ||||||||||| |||||||| |||||  || ||||| | ||||| |||||||||||| ||||||| ||||  | ||||||||||| ||| |    
T  44454098 agagaagatgagaggaaagaaaaagtgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtgtgggtatcaagagatgtattgccacttaaag 44453999  T
Q  112 atgtctatgtatcat 126  Q
     ||||||||||||||    
T  44453998 gtgtctatgtatcat 44453984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 12 - 101
Target Start/End: Complemental strand, 13414880 - 13414791
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattg 101  Q
    |||||||| || || ||||||||| |||| |||||  |||||||| |||| |||||| |||||||| |||||||||||||||||||||||    
T  13414880 agagaagatgatagaaaagagaaaatgtgcttgtgtggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattg 13414791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 7740852 - 7740733
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    ||||||||||||| |||| ||||| | |  |||||  ||||||||||  |||||||||| |||||||||| |||||||| || ||||||| ||| |||||    
T  7740852 agagaagaggagatgaaaaagaaaatatatttgtgtggggtccacatagccacgtgtcatatttttatgtaggtgtcaatggatgtattgtcacataagg 7740753  T
Q  112 atgtctatgtatcattactc 131  Q
     |||| ||||||||| ||||    
T  7740752 ttgtcaatgtatcataactc 7740733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 44332352 - 44332430
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaa 90  Q
    ||||||||| ||| |||||||||||| |  |||||| ||||||| | | |||| |||||||||||||||||||||||||    
T  44332352 agagaagagaagaagaaagagaaagtatacttgtgcggggtccatagggccacatgtcagatttttatgtgggtgtcaa 44332430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 104
Target Start/End: Complemental strand, 48489419 - 48489328
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgcca 104  Q
    |||||||||| ||| ||| ||||| |||| |||||| || ||||| ||||||| |||||||||||| ||||| ||||  ||||||||||||||    
T  48489419 agagaagaggtgagaaaatagaaaatgtgcttgtgcgggatccacgtgaccacatgtcagatttttgtgtggatgtc-cagggtgtattgcca 48489328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 105
Target Start/End: Original strand, 5489899 - 5489942
Alignment:
Q  61 ccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccac 105  Q
    |||||||||||| |||||||||||||| |||||||||||||||||    
T  5489899 ccacgtgtcagaattttatgtgggtgt-aaagggtgtattgccac 5489942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 105
Target Start/End: Complemental strand, 43571063 - 43571020
Alignment:
Q  61 ccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccac 105  Q
    |||||||||||| |||||||||||||| |||||||||||||||||    
T  43571063 ccacgtgtcagaattttatgtgggtgt-aaagggtgtattgccac 43571020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 105
Target Start/End: Complemental strand, 48498939 - 48498896
Alignment:
Q  61 ccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccac 105  Q
    |||||||||||| |||||||||||||| |||||||||||||||||    
T  48498939 ccacgtgtcagaattttatgtgggtgt-aaagggtgtattgccac 48498896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 105
Target Start/End: Complemental strand, 750283 - 750239
Alignment:
Q  60 accacgtgtcagatttttatgtgggtgtcaaagggtgtattgccac 105  Q
    ||||||||||||| |||| ||||||||| |||||||||||||||||    
T  750283 accacgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 750239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 105
Target Start/End: Original strand, 4401451 - 4401494
Alignment:
Q  61 ccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccac 105  Q
    |||||||||||| |||| ||||||||| |||||||||||||||||    
T  4401451 ccacgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 4401494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 105
Target Start/End: Original strand, 7447948 - 7447991
Alignment:
Q  61 ccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccac 105  Q
    |||||||||||| |||| ||||||||| |||||||||||||||||    
T  7447948 ccacgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 7447991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 105
Target Start/End: Complemental strand, 50448237 - 50448194
Alignment:
Q  61 ccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccac 105  Q
    |||||||||||| |||| ||||||||| |||||||||||||||||    
T  50448237 ccacgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 50448194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 89; Significance: 5e-43; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 15 - 131
Target Start/End: Complemental strand, 28177891 - 28177775
Alignment:
Q  15 gaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaaggatg 114  Q
    ||||||||||| |||||||||||||| |||||| |||||||  |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  28177891 gaagaggagagaaaagagaaagtgtgtttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatg 28177792  T
Q  115 tctatgtatcattactc 131  Q
    |||||||||||| ||||    
T  28177791 tctatgtatcataactc 28177775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 2740393 - 2740274
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    ||||||| |||||| |||||||||||||| |||||| || ||||| |||| ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  2740393 agagaaggggagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagg 2740294  T
Q  112 atgtctatgtatcattactc 131  Q
    ||||||||||||||||||||    
T  2740293 atgtctatgtatcattactc 2740274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 12 - 128
Target Start/End: Original strand, 18520865 - 18520981
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||||||||  |||||||||||||| |||||| |||||||| |||| ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  18520865 agagaagaggagataaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagg 18520964  T
Q  112 atgtctatgtatcatta 128  Q
     ||||||||||||||||    
T  18520965 gtgtctatgtatcatta 18520981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 12 - 140
Target Start/End: Original strand, 36732923 - 36733051
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||||||||| |||||||||||||| |||||| |||||||| |||| | ||||||||||||| |||||||||||||||||||||||| ||||||||    
T  36732923 agagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactatgtgtcagatttttgtgtgggtgtcaaagggtgtattgctacctaagg 36733022  T
Q  112 atgtctatgtatcattactcgtatgaaaa 140  Q
     ||||||||||||||||||| | ||||||    
T  36733023 gtgtctatgtatcattactcttctgaaaa 36733051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 40145526 - 40145407
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||||||||| |||||||||||||| |||||| |||||||| |||| ||||||||||||||| ||||| ||| |||||||||||||||||||||||    
T  40145526 agagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgttaaagggtgtattgccacctaagg 40145427  T
Q  112 atgtctatgtatcattactc 131  Q
     |||||||||||||||||||    
T  40145426 gtgtctatgtatcattactc 40145407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 6679817 - 6679698
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||||||||| ||||||||| |||| |||||| |||||||  |||||||||||||||||||| ||||||||||||| ||||||||||||||||| |    
T  6679817 agagaagaggagagaaaagagaaaatgtgtttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaag 6679718  T
Q  112 atgtctatgtatcattactc 131  Q
    ||||||||||||||| ||||    
T  6679717 atgtctatgtatcataactc 6679698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 14831933 - 14831814
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||||||||  ||| |||||||||| |||||| || ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||     
T  14831933 agagaagaggagaaaaaaaagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaaga 14831834  T
Q  112 atgtctatgtatcattactc 131  Q
     |||||||||||||||||||    
T  14831833 gtgtctatgtatcattactc 14831814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 33149619 - 33149738
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||||||||| |||||||||||||| |||||| || ||||| |||| |||||||| |||||| |||||||||||||||||||||| ||||||||||    
T  33149619 agagaagaggagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattaccacctaagg 33149718  T
Q  112 atgtctatgtatcattactc 131  Q
     |||||||||||||||||||    
T  33149719 gtgtctatgtatcattactc 33149738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 35785318 - 35785199
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||| ||||| ||||||||||||||||||||| || ||||| | || ||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  35785318 agagaagatgagagaaaagagaaagtgtgattgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagg 35785219  T
Q  112 atgtctatgtatcattactc 131  Q
     |||||||||||||||||||    
T  35785218 gtgtctatgtatcattactc 35785199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 42414283 - 42414402
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    ||||||||||| || ||||| |||||||| |||||| ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||  |    
T  42414283 agagaagaggaaagaaaagataaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctactg 42414382  T
Q  112 atgtctatgtatcattactc 131  Q
     |||||||||||||||||||    
T  42414383 gtgtctatgtatcattactc 42414402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 133 - 228
Target Start/End: Original strand, 2485055 - 2485151
Alignment:
Q  133 tatgaaaaggccaagattatgtttt-ctttaagggacaaatcaagattaatcatttacttcacatgcgaagagtattttagatacaaaccaagttgt 228  Q
    |||||| |||||||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  2485055 tatgaacaggccaagattatgtttttctttaagggacaaatcaagattaatcagttactttacatgcgaagagtattttagatacaaaccaagttgt 2485151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 13811771 - 13811652
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    ||||||||||||||  ||||||||||||| |||||| |||||||| |||| ||||||||||||||| ||||||||||||| | |||||||||||||||||    
T  13811771 agagaagaggagagagaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatgatgtattgccacctaagg 13811672  T
Q  112 atgtctatgtatcattactc 131  Q
     |||||||||||| ||||||    
T  13811671 gtgtctatgtatctttactc 13811652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 12 - 132
Target Start/End: Original strand, 20073497 - 20073617
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||||||||||||| |||||||||| ||||||||||||||| ||  ||||||  ||||||||||||| |||||||||||||||||| || |||| |    
T  20073497 agagaagaggagaggaaatagaaagtgtgcttgtgcagggtccacgtggtcacgtgcaagatttttatgtgagtgtcaaagggtgtattgtcatctaatg 20073596  T
Q  112 atgtctatgtatcattactcg 132  Q
    |||||||| ||||||||||||    
T  20073597 atgtctatatatcattactcg 20073617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 2252149 - 2252268
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    ||||||||| ||| ||||||||||||||  |||||| ||||||| ||| |||| |||||||||||| |||||||||||| ||||||||||||||||||||    
T  2252149 agagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagg 2252248  T
Q  112 atgtctatgtatcattactc 131  Q
    |||| |||||||||| ||||    
T  2252249 atgtttatgtatcataactc 2252268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 26720635 - 26720516
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    ||||||||| |||| |||||||||||||| |||||| || ||||  || ||||||||||||||||| ||| ||||| |||||||||||||||||||||||    
T  26720635 agagaagagaagagaaaagagaaagtgtgcttgtgcgggatccatgtggccacgtgtcagatttttttgtaggtgttaaagggtgtattgccacctaagg 26720536  T
Q  112 atgtctatgtatcattactc 131  Q
    ||||||||||||||| ||||    
T  26720535 atgtctatgtatcataactc 26720516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 26990384 - 26990265
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    ||||||||| |||| |||||||||||||| |||||| || ||||  || ||||||||||||||||| ||| ||||| |||||||||||||||||||||||    
T  26990384 agagaagagaagagaaaagagaaagtgtgcttgtgcgggatccatgtggccacgtgtcagatttttttgtaggtgttaaagggtgtattgccacctaagg 26990285  T
Q  112 atgtctatgtatcattactc 131  Q
    ||||||||||||||| ||||    
T  26990284 atgtctatgtatcataactc 26990265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 33825305 - 33825424
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    ||||||||| |||  |||||||||||||| ||||| | ||| ||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||     
T  33825305 agagaagagaagataaaagagaaagtgtgcttgtgtaaggttcacatgaacacgtgtcagatttttatgtgggtgtcaaggagtgtattgccacctaaga 33825404  T
Q  112 atgtctatgtatcattactc 131  Q
    ||||||||| ||||||||||    
T  33825405 atgtctatgcatcattactc 33825424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 3921246 - 3921365
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    ||||||||| ||| ||||||||||||||  |||||| ||||||| ||| |||| |||||||||||| |||||||||||| ||||||||||||||||||||    
T  3921246 agagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagg 3921345  T
Q  112 atgtctatgtatcattactc 131  Q
     ||| |||||||||| ||||    
T  3921346 gtgtttatgtatcataactc 3921365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 15409591 - 15409710
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||||||||| ||||||| |||||| |||||| |||||||  || | ||||||||||||||| ||||||||||||||  ||||||| |||||||||    
T  15409591 agagaagaggagagaaaagagagagtgtgcttgtgcggggtccatgtggctacgtgtcagatttttgtgtgggtgtcaaagaatgtattgtcacctaagg 15409690  T
Q  112 atgtctatgtatcattactc 131  Q
    ||||||||||||||| ||||    
T  15409691 atgtctatgtatcataactc 15409710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 16 - 131
Target Start/End: Original strand, 35943877 - 35943992
Alignment:
Q  16 aagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaaggatgt 115  Q
    ||||||||||||||||||||||||| |||||  || ||||| | || ||||||||||||||| ||||||||||||| | ||||||||||||||||| |||    
T  35943877 aagaggagaggaaagagaaagtgtgcttgtgtgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatgatgtattgccacctaagggtgt 35943976  T
Q  116 ctatgtatcattactc 131  Q
    ||||||||||| ||||    
T  35943977 ctatgtatcataactc 35943992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 31009107 - 31008988
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    ||||||||| |||||||| |||||||||| |||||| || ||||| |||| ||||||||||||||| |||||||||  |||  ||||||| |||||||||    
T  31009107 agagaagagaagaggaaatagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtggaagaatgtattgtcacctaagg 31009008  T
Q  112 atgtctatgtatcattactc 131  Q
    |||| |||||||||| ||||    
T  31009007 atgtttatgtatcataactc 31008988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 12 - 130
Target Start/End: Complemental strand, 16328020 - 16327902
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    ||||||||| | | |||||| |||||||| |||||   ||| ||||||| ||||||||||||||||||||||||||||| || |||||||||||||||||    
T  16328020 agagaagagaaaatgaaagaaaaagtgtgcttgtgtgaggtgcacatgaacacgtgtcagatttttatgtgggtgtcaatggatgtattgccacctaagg 16327921  T
Q  112 atgtctatgtatcattact 130  Q
    || | ||| ||||||||||    
T  16327920 atatttatctatcattact 16327902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 9603932 - 9603813
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||| || | ||||||||||||||||||||   ||||||| ||||||| ||||||||||||| ||| ||||| || | |||||||  |||||||||    
T  9603932 agagaagacgaaatgaaagagaaagtgtgattgtatggggtccatatgaccatgtgtcagatttttgtgtaggtgtgaatgagtgtattatcacctaagg 9603833  T
Q  112 atgtctatgtatcattactc 131  Q
    |||| |||||||||||||||    
T  9603832 atgtatatgtatcattactc 9603813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 6259982 - 6260101
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    ||||||||||||| ||||||||||||||| || ||   ||||||  |||||| |||| ||||||||  |||||||| ||||||||||||| |||||| ||    
T  6259982 agagaagaggagatgaaagagaaagtgtgcttctgtgaggtccatgtgaccatgtgttagatttttgcgtgggtgttaaagggtgtattgtcacctatgg 6260081  T
Q  112 atgtctatgtatcattactc 131  Q
     ||| |||||||||||||||    
T  6260082 ttgtgtatgtatcattactc 6260101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 72 - 130
Target Start/End: Original strand, 36875644 - 36875702
Alignment:
Q  72 atttttatgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattact 130  Q
    |||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  36875644 atttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattact 36875702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 39688878 - 39688997
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    ||||||||  ||| ||||||||||||||  || ||| |||| || |||||||| | |||||||||| |||||||||||| || ||||||||||| |||||    
T  39688878 agagaagaaaagaagaaagagaaagtgtacttatgcggggttcatatgaccacatatcagatttttgtgtgggtgtcaagggatgtattgccacttaagg 39688977  T
Q  112 atgtctatgtatcattactc 131  Q
     ||| |||||||||| ||||    
T  39688978 gtgtttatgtatcataactc 39688997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 68 - 126
Target Start/End: Complemental strand, 10356698 - 10356639
Alignment:
Q  68 tcagatttttatgtgggtgtcaaaggg-tgtattgccacctaaggatgtctatgtatcat 126  Q
    |||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  10356698 tcagatttttgtgtgggtgtcaatgggatgtattgccacctaaggatgtctatgtatcat 10356639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 14 - 87
Target Start/End: Complemental strand, 21370121 - 21370048
Alignment:
Q  14 agaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgt 87  Q
    |||||| ||||||||||||||| |||| |||||| |||||||| ||||||| ||||||||||||  ||||||||    
T  21370121 agaagatgagaggaaagagaaaatgtgtttgtgcggggtccacgtgaccacatgtcagatttttgagtgggtgt 21370048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 42 - 131
Target Start/End: Original strand, 41470427 - 41470516
Alignment:
Q  42 ttgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattactc 131  Q
    |||||| |||||||| |||| ||||||||||||||||| ||  | | ||||| ||||||||||||||| | ||||||||||| |||||||    
T  41470427 ttgtgcggggtccacgtgactacgtgtcagatttttatatgaattttaaaggatgtattgccacctaaaggtgtctatgtattattactc 41470516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 108
Target Start/End: Original strand, 39557498 - 39557594
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccaccta 108  Q
    |||||||||||||  |||||||||||||||||||   |||||||  ||| |||||||||||||||| ||||| ||| ||  |||||||| |||||||    
T  39557498 agagaagaggagataaaagagaaagtgtgattgtatggggtccatgtgatcacgtgtcagatttttgtgtggatgttaagaggtgtattaccaccta 39557594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 116
Target Start/End: Complemental strand, 25831400 - 25831302
Alignment:
Q  16 aagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaaggatgt 115  Q
    ||||||| | |||||||||| |||| |||||  |||||||||||||||||||| |||||||| ||||  | || |  ||||||||||||| |||||||||    
T  25831400 aagaggatatgaaagagaaaatgtgtttgtgtggggtccacatgaccacgtgttagatttttttgtgaatctcga--ggtgtattgccacttaaggatgt 25831303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 131
Target Start/End: Complemental strand, 38296320 - 38296203
Alignment:
Q  14 agaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaaggat 113  Q
    ||||||||||| ||| ||||||||||| |||||  || ||||| |  | ||||||| ||||||| ||||||| | ||  ||||||||| ||||||||       
T  38296320 agaagaggagatgaatgagaaagtgtgcttgtgttggatccacgtagctacgtgtctgatttttgtgtgggtattaagaggtgtattgacacctaagata 38296221  T
Q  114 gtctatgtatcattactc 131  Q
    ||||||||||||| ||||    
T  38296220 gtctatgtatcataactc 38296203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 104
Target Start/End: Original strand, 38470690 - 38470744
Alignment:
Q  49 gggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgcca 104  Q
    ||||||| || ||||||| ||||| |||||||||||||| ||||||||||||||||    
T  38470690 gggtccagattaccacgtatcagaattttatgtgggtgt-aaagggtgtattgcca 38470744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 105
Target Start/End: Original strand, 5257118 - 5257161
Alignment:
Q  61 ccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccac 105  Q
    |||| ||||||| |||||||||||||| |||||||||||||||||    
T  5257118 ccacatgtcagaattttatgtgggtgt-aaagggtgtattgccac 5257161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 88; Significance: 2e-42; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 32869797 - 32869678
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||||||||| |||||||||||||| |||||| |||||||| |||| ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  32869797 agagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagg 32869698  T
Q  112 atgtctatgtatcattactc 131  Q
     |||||||||||| ||||||    
T  32869697 gtgtctatgtatctttactc 32869678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 12 - 128
Target Start/End: Original strand, 22880639 - 22880755
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||||||||| |||||||||||||| |||||| |||||||| |||| |||||||||| |||| |||||||||||||||||||||||||||||||||    
T  22880639 agagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagaattttgtgtgggtgtcaaagggtgtattgccacctaagg 22880738  T
Q  112 atgtctatgtatcatta 128  Q
     ||||||||||||||||    
T  22880739 gtgtctatgtatcatta 22880755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 17598673 - 17598554
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||||||||| |||||||||||||| |||||| |||||||| |||| ||||||||||||||| ||||||||||||| | |||||||||||||||||    
T  17598673 agagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgacaacgtgtcagatttttgtgtgggtgtcaaaagatgtattgccacctaagg 17598574  T
Q  112 atgtctatgtatcattactc 131  Q
     |||||||||||||||||||    
T  17598573 gtgtctatgtatcattactc 17598554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 31953011 - 31953130
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    ||||||||| ||| ||||||||||||||| |||||   ||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  31953011 agagaagagaagatgaaagagaaagtgtgtttgtgtgaggtccacatgaacacatgtcagatttttatgtgggtgtcaaggggtgtattgccacctaagg 31953110  T
Q  112 atgtctatgtatcattactc 131  Q
    |||||||| |||||||||||    
T  31953111 atgtctatctatcattactc 31953130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 31976367 - 31976248
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||||||||| |||||||||||||| |||||| |||| ||  |||||||||||||||||||| ||||||||| ||||||| |||||||||||||||    
T  31976367 agagaagaggagagaaaagagaaagtgtgcttgtgcggggttcatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtatattgccacctaagg 31976268  T
Q  112 atgtctatgtatcattactc 131  Q
    ||||||||||||||| ||||    
T  31976267 atgtctatgtatcataactc 31976248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 11427737 - 11427616
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccaccta--a 109  Q
    |||||||||||||| |||||||||||||| |||||| || ||||| |||| ||||||||||||||| ||||||||||||||| ||||||||||||||  |    
T  11427737 agagaagaggagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgccacctaaga 11427638  T
Q  110 ggatgtctatgtatcattactc 131  Q
    || |||||||||||||||||||    
T  11427637 gggtgtctatgtatcattactc 11427616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 6209446 - 6209565
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||||||||| |||||||||||||| | |||| |||||||| |||| ||||| ||||||||| |||| ||||||||  ||||||||||||||||||    
T  6209446 agagaagaggagagaaaagagaaagtgtgctagtgcggggtccacgtgactacgtgacagatttttgtgtgagtgtcaaatagtgtattgccacctaagg 6209545  T
Q  112 atgtctatgtatcattactc 131  Q
     |||||||||||||||||||    
T  6209546 gtgtctatgtatcattactc 6209565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 31110742 - 31110859
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    ||||||||| |||| |||||||||||||| ||||||||||||||  ||   |||||||||||||||  ||| ||||||||||||||||||||||||||||    
T  31110742 agagaagagtagagaaaagagaaagtgtgcttgtgcagggtccatgtggttacgtgtcagattttt--gtgagtgtcaaagggtgtattgccacctaagg 31110839  T
Q  112 atgtctatgtatcattactc 131  Q
    ||||||||||||||| ||||    
T  31110840 atgtctatgtatcataactc 31110859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 15508005 - 15508124
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    ||||||||| ||| ||||||||||||||  |||||| ||||||| ||| |||| |||||||||||| |||||||||||| ||||||||||||||||||||    
T  15508005 agagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagg 15508104  T
Q  112 atgtctatgtatcattactc 131  Q
     ||| |||||||||| ||||    
T  15508105 gtgtttatgtatcataactc 15508124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 15990023 - 15990142
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    ||||||||| ||| ||||||||||||||  |||||| ||||||| ||| |||| |||||||||||| |||||||||||| ||||||||||||||||||||    
T  15990023 agagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagg 15990122  T
Q  112 atgtctatgtatcattactc 131  Q
     ||| |||||||||| ||||    
T  15990123 gtgtttatgtatcataactc 15990142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 30341341 - 30341460
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    ||||||||| ||| ||||||||||||||  |||||| ||||||| ||| |||| |||||||||||| |||||||||||| ||||||||||||||||||||    
T  30341341 agagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagg 30341440  T
Q  112 atgtctatgtatcattactc 131  Q
     ||| |||||||||| ||||    
T  30341441 gtgtttatgtatcataactc 30341460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 4231667 - 4231548
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    ||||||||| ||| ||||||||||||||  |||||| ||||||| ||| ||||||||||||||||| |||||||| ||| |||||||||||||||||| |    
T  4231667 agagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacgtgtcagatttttgtgtgggtggcaaggggtgtattgccacctaatg 4231568  T
Q  112 atgtctatgtatcattactc 131  Q
    |||| |||| ||||| ||||    
T  4231567 atgtttatgaatcataactc 4231548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 16 - 131
Target Start/End: Original strand, 31109385 - 31109500
Alignment:
Q  16 aagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaaggatgt 115  Q
    |||||||||| |||||||||||||  || ||| ||||| || |||| ||||||||||||||| ||||| ||||||||||||||||||||||||||| |||    
T  31109385 aagaggagagaaaagagaaagtgtacttttgcggggtctacgtgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacctaagggtgt 31109484  T
Q  116 ctatgtatcattactc 131  Q
    ||||  ||||||||||    
T  31109485 ctattaatcattactc 31109500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 27 - 127
Target Start/End: Original strand, 28536484 - 28536582
Alignment:
Q  27 aaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcat 126  Q
    |||||||||||||| |||||  ||||||||||||||  ||||||||||||| |||||||||||| || ||||||||||||||||||||| ||||||||||    
T  28536484 aaagagaaagtgtgcttgtgtggggtccacatgacc--gtgtcagatttttgtgtgggtgtcaagggttgtattgccacctaaggatgtttatgtatcat 28536581  T

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Target: chr6; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 29857946 - 29857827
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    ||||||||| |||| |||||||||||||| || ||| || ||||| | || ||||||||||||||| ||||||||| ||| |||||||||||| |||| |    
T  29857946 agagaagagaagagaaaagagaaagtgtgcttatgcgggatccacgtaactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccatctaaag 29857847  T
Q  112 atgtctatgtatcattactc 131  Q
     |||||||||||||||||||    
T  29857846 gtgtctatgtatcattactc 29857827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 12732601 - 12732482
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    ||||||||||||| |||||||||| |||| || ||  || |||||||  ||||||||||||||||| |||||||||||| |  | ||||||||| ||||     
T  12732601 agagaagaggagatgaaagagaaaatgtgcttatgtgggatccacatagccacgtgtcagatttttgtgtgggtgtcaatgattatattgccacttaaga 12732502  T
Q  112 atgtctatgtatcattactc 131  Q
    ||||||||||||||||||||    
T  12732501 atgtctatgtatcattactc 12732482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 14 - 140
Target Start/End: Complemental strand, 15832694 - 15832568
Alignment:
Q  14 agaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaaggat 113  Q
    |||||||||||  ||||||||| |||  ||||||||| ||||| |||| |||||||| |||||| ||||||||||||| | | ||||| ||||||| | |    
T  15832694 agaagaggagaaaaaagagaaaatgtatttgtgcaggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaatgatttattgtcacctaaaggt 15832595  T
Q  114 gtctatgtatcattactcgtatgaaaa 140  Q
    |||||||||||||||||| | ||||||    
T  15832594 gtctatgtatcattactcttttgaaaa 15832568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 16 - 128
Target Start/End: Original strand, 23128112 - 23128224
Alignment:
Q  16 aagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaaggatgt 115  Q
    |||||||||| |||||||||||||| |||||  || ||||| |||| ||||||||||||||| ||||||||||||||| ||||||  ||| ||| | |||    
T  23128112 aagaggagagaaaagagaaagtgtgcttgtgtgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattatcacataaaggtgt 23128211  T
Q  116 ctatgtatcatta 128  Q
    |||| ||||||||    
T  23128212 ctatatatcatta 23128224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 12 - 130
Target Start/End: Complemental strand, 946495 - 946377
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||||||||| |||||||||||||| | | || || |  || |||| | |||||||||||||  || ||||||||||||||||||  |||||||||    
T  946495 agagaagaggagagaaaagagaaagtgtgctagagcgggatttacgtgactaggtgtcagatttttgggtaggtgtcaaagggtgtattatcacctaagg 946396  T
Q  112 atgtctatgtatcattact 130  Q
    ||||||||||||| |||||    
T  946395 atgtctatgtatcgttact 946377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 9379697 - 9379807
Alignment:
Q  16 aagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaaggatgt 115  Q
    ||||| ||| |||||||||| |||| |||||   | |||||||| |||||||||| |||||| | |||||||||| || ||||||| || ||||||||||    
T  9379697 aagagaagatgaaagagaaaatgtgtttgtgtgagatccacatggccacgtgtcaaatttttgtatgggtgtcaagggatgtattgtcatctaaggatgt 9379796  T
Q  116 ctatgtatcat 126  Q
    |||||||||||    
T  9379797 ctatgtatcat 9379807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 12 - 87
Target Start/End: Complemental strand, 30870133 - 30870058
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgt 87  Q
    |||||||||||||||||||||||| |||| |||||| |||||||  ||||||| ||| |||||||||| |||||||    
T  30870133 agagaagaggagaggaaagagaaaatgtgcttgtgcggggtccatgtgaccacatgttagatttttatatgggtgt 30870058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 97 - 131
Target Start/End: Original strand, 22422084 - 22422118
Alignment:
Q  97 tattgccacctaaggatgtctatgtatcattactc 131  Q
    |||||||||||||||||||||||||||||||||||    
T  22422084 tattgccacctaaggatgtctatgtatcattactc 22422118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 105
Target Start/End: Original strand, 3213523 - 3213566
Alignment:
Q  61 ccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccac 105  Q
    |||||||||||| |||||||||||||| |||||||||||||||||    
T  3213523 ccacgtgtcagaattttatgtgggtgt-aaagggtgtattgccac 3213566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 105
Target Start/End: Complemental strand, 21293654 - 21293611
Alignment:
Q  61 ccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccac 105  Q
    |||||||||||| |||||||||||||| |||||||||||||||||    
T  21293654 ccacgtgtcagaattttatgtgggtgt-aaagggtgtattgccac 21293611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 105
Target Start/End: Original strand, 7367672 - 7367715
Alignment:
Q  61 ccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccac 105  Q
    |||||||||||| |||| ||||||||| |||||||||||||||||    
T  7367672 ccacgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 7367715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 105
Target Start/End: Complemental strand, 26669986 - 26669943
Alignment:
Q  61 ccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccac 105  Q
    |||||||||||| |||| ||||||||| |||||||||||||||||    
T  26669986 ccacgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 26669943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1268 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 910 - 1029
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    ||||||||||||||||||||||||||||| |||||| || | ||| |||| ||||||||| ||||| ||||| ||| ||||||||||||||||||||| |    
T  910 agagaagaggagaggaaagagaaagtgtgcttgtgcgggattcacgtgactacgtgtcagttttttgtgtggatgttaaagggtgtattgccacctaaag 1009  T
Q  112 atgtctatgtatcattactc 131  Q
    ||||||||||||||||||||    
T  1010 atgtctatgtatcattactc 1029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1267 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 910 - 1029
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    ||||||||||||||||||||||||||||| |||||| || | ||| |||| ||||||||| ||||| ||||| ||| ||||||||||||||||||||| |    
T  910 agagaagaggagaggaaagagaaagtgtgcttgtgcgggattcacgtgactacgtgtcagttttttgtgtggatgttaaagggtgtattgccacctaaag 1009  T
Q  112 atgtctatgtatcattactc 131  Q
    ||||||||||||||||||||    
T  1010 atgtctatgtatcattactc 1029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 10090 - 10209
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||||||||| |||||||||||||| |||| |  ||||||| |||| ||||||||||||||||||||| ||||||||| ||||||||||||||| |    
T  10090 agagaagaggagagaaaagagaaagtgtgcttgtacgcggtccacgtgactacgtgtcagatttttatgtggatgtcaaaggatgtattgccacctaaag 10189  T
Q  112 atgtctatgtatcattactc 131  Q
     |||||||||||||| ||||    
T  10190 gtgtctatgtatcataactc 10209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 4148 - 4029
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    ||||||||| |||| |||||||||||||| || ||| || ||||| | || ||||||||||||||| ||||||||| ||| |||||||||||| |||| |    
T  4148 agagaagagaagagaaaagagaaagtgtgcttatgcgggatccacgtaactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccatctaaag 4049  T
Q  112 atgtctatgtatcattactc 131  Q
     |||||||||||||||||||    
T  4048 gtgtctatgtatcattactc 4029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 12 - 111
Target Start/End: Complemental strand, 152617 - 152518
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    ||||||||| ||| ||||||||||||||  |||||| || |||| |||||||| |||||||||||| |||||||||||| ||||||||||||||| ||||    
T  152617 agagaagagaagaagaaagagaaagtgtatttgtgcgggatccatatgaccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacccaagg 152518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 17 - 108
Target Start/End: Complemental strand, 17168 - 17077
Alignment:
Q  17 agaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccaccta 108  Q
    |||| |||||||||||||| |||| |||||| |||||||  ||||||| |||||||||||| ||||| |||| | || |||||||| |||||    
T  17168 agagaagaggaaagagaaaatgtgcttgtgcggggtccatgtgaccacatgtcagatttttgtgtggatgtcgagggatgtattgcaaccta 17077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 8844 - 8963
Alignment:
Q  12 agagaagaggagaggaaagagaaagtgtgattgtgcagggtccacatgaccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagg 111  Q
    |||||||| | ||||||||||||| |||  |||||  |||||||| |||| | |||||| |||||| ||| | |||||||  |||||||| ||| |||||    
T  8844 agagaagatgggaggaaagagaaaatgtacttgtgtggggtccacgtgactatgtgtcaaatttttgtgtagatgtcaaatagtgtattgtcacttaagg 8943  T
Q  112 atgtctatgtatcattactc 131  Q
    |||||||| |||||| ||||    
T  8944 atgtctatatatcataactc 8963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 105
Target Start/End: Original strand, 808 - 851
Alignment:
Q  61 ccacgtgtcagatttttatgtgggtgtcaaagggtgtattgccac 105  Q
    |||||||||||| |||| ||||||||| |||||||||||||||||    
T  808 ccacgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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