View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6499_low_12 (Length: 310)

Name: NF6499_low_12
Description: NF6499
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6499_low_12
NF6499_low_12
[»] chr5 (4 HSPs)
chr5 (12-290)||(18313488-18313762)
chr5 (127-292)||(34378170-34378336)
chr5 (127-289)||(698433-698596)
chr5 (127-291)||(18593315-18593480)
[»] chr3 (13 HSPs)
chr3 (127-290)||(31482956-31483119)
chr3 (127-291)||(34475600-34475763)
chr3 (117-292)||(47235761-47235936)
chr3 (117-291)||(45163918-45164092)
chr3 (117-291)||(20611846-20612019)
chr3 (117-291)||(2392350-2392524)
chr3 (136-291)||(53247981-53248138)
chr3 (127-291)||(17551029-17551189)
chr3 (164-291)||(2394114-2394242)
chr3 (119-292)||(43012440-43012613)
chr3 (119-294)||(19176567-19176744)
chr3 (216-291)||(30352285-30352359)
chr3 (117-237)||(40023472-40023590)
[»] chr7 (13 HSPs)
chr7 (127-300)||(47325720-47325894)
chr7 (127-291)||(5860132-5860297)
chr7 (127-292)||(44353406-44353573)
chr7 (127-269)||(37795061-37795204)
chr7 (127-291)||(38306333-38306498)
chr7 (127-290)||(3419500-3419665)
chr7 (127-291)||(10244254-10244419)
chr7 (117-291)||(25160878-25161048)
chr7 (186-291)||(31971978-31972084)
chr7 (136-237)||(33435191-33435291)
chr7 (185-292)||(3867246-3867354)
chr7 (117-237)||(34390025-34390143)
chr7 (119-269)||(41089614-41089764)
[»] chr2 (4 HSPs)
chr2 (127-291)||(10524173-10524337)
chr2 (127-291)||(39338709-39338874)
chr2 (127-291)||(17116723-17116889)
chr2 (142-291)||(387262-387411)
[»] chr8 (12 HSPs)
chr8 (127-292)||(20138498-20138665)
chr8 (127-291)||(9519571-9519737)
chr8 (127-290)||(12898120-12898283)
chr8 (128-291)||(31207206-31207370)
chr8 (127-291)||(37986702-37986867)
chr8 (127-291)||(24995238-24995404)
chr8 (127-291)||(32066139-32066304)
chr8 (127-291)||(41893246-41893410)
chr8 (127-233)||(16457364-16457470)
chr8 (127-289)||(34388852-34389014)
chr8 (158-237)||(22773602-22773681)
chr8 (127-224)||(36630909-36631006)
[»] chr1 (9 HSPs)
chr1 (117-291)||(24449774-24449948)
chr1 (127-291)||(46692663-46692828)
chr1 (127-291)||(5459233-5459398)
chr1 (127-286)||(31585608-31585769)
chr1 (128-289)||(41920525-41920692)
chr1 (128-242)||(30685798-30685912)
chr1 (127-291)||(5389266-5389430)
chr1 (162-292)||(6764224-6764355)
chr1 (120-224)||(24684390-24684493)
[»] chr4 (5 HSPs)
chr4 (127-291)||(8255099-8255264)
chr4 (127-291)||(8268517-8268682)
chr4 (127-223)||(30964513-30964609)
chr4 (127-287)||(30167412-30167573)
chr4 (127-281)||(4305797-4305951)
[»] scaffold0343 (1 HSPs)
scaffold0343 (127-291)||(5777-5943)
[»] scaffold0068 (1 HSPs)
scaffold0068 (117-269)||(35640-35790)
[»] chr6 (2 HSPs)
chr6 (127-290)||(3117565-3117729)
chr6 (190-291)||(10541967-10542069)


Alignment Details
Target: chr5 (Bit Score: 219; Significance: 1e-120; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 12 - 290
Target Start/End: Complemental strand, 18313762 - 18313488
Alignment:
Q  12 ataacacaagttttattgaagaatattttaaagaatctaattattattattatttttctcataacaagactgtgaacctctcgaaaacgaaaactgaaat 111  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||||    ||||||||||||||||||||||||||| |||||||||||||||||    
T  18313762 ataacacaaactttattgaagaatattttaaagaatctaattattattatt----ttctcataacaagactgtgaacctctcaaaaacgaaaactgaaat 18313667  T
Q  112 aaactttaagttggttttttggg-ctttgtgttgtactctttcggtagattgaaggtcgcgaggtttgtgatagctgcatgatcattcgtttaggtgctc 210  Q
    |||||| ||||||||||||| || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18313666 aaactt-aagttggtttttttggactttgtgttgtactctttcggtggattgaaggtcgcgaggtttgtgatagctgcatgatcattcgtttaggtgctc 18313568  T
Q  211 ttcgaaatgtggcttagcttgggtgttaggattttggagtttttctttagggtgttcttcatgggtgagtagtgacgatg 290  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18313567 ttcgaaatgtggcttagtttgggttttaggattttggagtttttctttagggtgttcttcatgggtgagtagtgacgatg 18313488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 127 - 292
Target Start/End: Original strand, 34378170 - 34378336
Alignment:
Q  127 tttttgggctttgtgttgtactctttcggtagattgaaggtcgcgaggtttgtgatagctgcatgatcattcgtttaggtgctcttcgaaatgtggctta 226  Q
    |||||||||||||| |||| |||||||||| ||  | ||||||||||||||||||||| ||  ||||| |||| |||| ||||||||| ||||||||| |    
T  34378170 tttttgggctttgttttgtgctctttcggtggaccggaggtcgcgaggtttgtgatagttgtttgatccttcggttagatgctcttcgtaatgtggctca 34378269  T
Q  227 gcttgggtgttaggattttggagtttt-tctttagggtgttcttcatgggtgagtagtgacgatgga 292  Q
    ||||||||||| || |||  ||||||| | || |||||||||||  |||||||||||||||||||||    
T  34378270 gcttgggtgttggggtttgagagttttattttgagggtgttctttgtgggtgagtagtgacgatgga 34378336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 127 - 289
Target Start/End: Original strand, 698433 - 698596
Alignment:
Q  127 tttttgggctttgtgttgtactctttcggtagattgaaggtcgcgaggtttgtgatagctgcatgatcattcgtttaggtgctcttcgaaatgtggctta 226  Q
    ||||||||||||||||||||||||||| || | |   |||| |||||||||||||||||||||| ||| |||| |||||||||||| ||||||||||| |    
T  698433 tttttgggctttgtgttgtactctttctgtggttcagaggttgcgaggtttgtgatagctgcataatccttcggttaggtgctctttgaaatgtggctca 698532  T
Q  227 gcttgggtgttaggattttggagtttt-tctttagggtgttcttcatgggtgagtagtgacgat 289  Q
    ||||||||||| || | |  ||||||| | |  |||||||||||  ||||||||||||||||||    
T  698533 gcttgggtgttggggtctgagagttttatttggagggtgttctttgtgggtgagtagtgacgat 698596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 127 - 291
Target Start/End: Original strand, 18593315 - 18593480
Alignment:
Q  127 tttttgggctttgtgttgtactctttcggtagattgaaggtcgcgaggtttgtgatagctgcatgatcattcgtttaggtgctcttcgaaatgtggctta 226  Q
    ||||||||||| ||||||| |||||||||| | | | |||||||||| |||||||||| ||||||||| |||| ||||||| |||||||||||||||| |    
T  18593315 tttttgggcttagtgttgtgctctttcggtggttcggaggtcgcgagatttgtgataggtgcatgatccttcggttaggtgttcttcgaaatgtggctca 18593414  T
Q  227 gcttgggtgttaggattttggagtttt-tctttagggtgttcttcatgggtgagtagtgacgatgg 291  Q
     |||||||||| || | | |||||||| | |  ||| |||||||  ||||||||||||||||||||    
T  18593415 acttgggtgttggggtctgggagttttatttggaggatgttctttgtgggtgagtagtgacgatgg 18593480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 100; Significance: 2e-49; HSPs: 13)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 127 - 290
Target Start/End: Original strand, 31482956 - 31483119
Alignment:
Q  127 tttttgggctttgtgttgtactctttcggtagattgaaggtcgcgaggtttgtgatagctgcatgatcattcgtttaggtgctcttcgaaatgtggctta 226  Q
    ||||||||||||||||||| |||||||||| ||||| ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |    
T  31482956 tttttgggctttgtgttgtgctctttcggtggattggaggtcgcgaggtttgtgatagctgcatgatccttcggttaggtgctcttcgaaatgtggctca 31483055  T
Q  227 gcttgggtgttaggattttggagtttttctttagggtgttcttcatgggtgagtagtgacgatg 290  Q
    |||| |||||| || |||  |||||||| || |||||||||||  ||||| |||||||||||||    
T  31483056 gcttaggtgttggggtttgagagttttttttaagggtgttctttgtgggttagtagtgacgatg 31483119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 127 - 291
Target Start/End: Complemental strand, 34475763 - 34475600
Alignment:
Q  127 tttttgggctttgtgttgtactctttcggtagattgaaggtcgcgaggtttgtgatagctgcatgatcattcgtttaggtgctcttcgaaatgtggctta 226  Q
    ||||||||||||||||||| |||||||||| ||||| |||||||||||||||||||||||| |||||| |||| ||||||||||||||||||||| || |    
T  34475763 tttttgggctttgtgttgtgctctttcggtggattggaggtcgcgaggtttgtgatagctgtatgatccttcggttaggtgctcttcgaaatgtgactca 34475664  T
Q  227 gcttgggtgttaggattttggagtttttctttagggtgttcttcatgggtgagtagtgacgatgg 291  Q
    |||| |||||| || | |  |||||||| || |||||||||||  ||||||||||||||||||||    
T  34475663 gcttaggtgttggggtatgagagttttt-ttaagggtgttctttgtgggtgagtagtgacgatgg 34475600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 117 - 292
Target Start/End: Original strand, 47235761 - 47235936
Alignment:
Q  117 ttaagttggttttttgggctttgtgttgtactctttcggtagattgaaggtcgcgaggtttgtgatagctgcatgatcattcgtttaggtgctcttcgaa 216  Q
    ||||||||||||| ||||||||||||| | |||||||||| |||   ||||||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  47235761 ttaagttggtttt-tgggctttgtgttttgctctttcggtggatcagaggtcgcgaggtttgtgatagctgcatgatccttcggttaggtgctcttcgaa 47235859  T
Q  217 atgtggcttagcttgggtgttaggattttggagtttt-tctttagggtgttcttcatgggtgagtagtgacgatgga 292  Q
    |||||| | |||||||||||| || | |  ||||||| | || |||||||||||  |||||||||||||||||||||    
T  47235860 atgtggttcagcttgggtgttggggtctgcgagttttattttgagggtgttctttgtgggtgagtagtgacgatgga 47235936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 117 - 291
Target Start/End: Original strand, 45163918 - 45164092
Alignment:
Q  117 ttaagttggttttttgggctttgtgttgtactctttcggtagattgaaggtcgcgaggtttgtgatagctgcatgatcattcgtttaggtgctcttcgaa 216  Q
    ||||||||||||| ||||||||||||||| |||||||||| ||| | ||||| ||| ||||||||||||||||||||| |||| ||||||||||||||||    
T  45163918 ttaagttggtttt-tgggctttgtgttgtgctctttcggtggatcggaggtcacgaagtttgtgatagctgcatgatccttcggttaggtgctcttcgaa 45164016  T
Q  217 atgtggcttagcttgggtgttaggattttggagtttt-tctttagggtgttcttcatgggtgagtagtgacgatgg 291  Q
    ||||||||||||||||||||| || | | |||||||| | || |||||||| ||  | ||||| ||||||||||||    
T  45164017 atgtggcttagcttgggtgttggggtctaggagttttattttgagggtgttatttgtaggtgattagtgacgatgg 45164092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 117 - 291
Target Start/End: Original strand, 20611846 - 20612019
Alignment:
Q  117 ttaagttggttttttgggctttgtgttgtactctttcggtagattgaaggtcgcgaggtttgtgatagctgcatgatcattcgtttaggtgctcttcgaa 216  Q
    ||||||||||||| ||||||||| ||||| |||||||||| ||| | |||||||||||||||||||||||| |||||| |||| ||||||||||||||||    
T  20611846 ttaagttggtttt-tgggctttgcgttgtgctctttcggtggatcggaggtcgcgaggtttgtgatagctgaatgatccttcggttaggtgctcttcgaa 20611944  T
Q  217 atgtggcttagcttgggtgttaggattttggagtttt-tctttagggtgttcttcatgggtgagtagtgacgatgg 291  Q
    ||||| || |||||||||||| || | | |||||||| |  | |||||||||||  ||||||||||||||||||||    
T  20611945 atgtgactcagcttgggtgtt-gggtctaggagttttattctgagggtgttctttgtgggtgagtagtgacgatgg 20612019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 117 - 291
Target Start/End: Complemental strand, 2392524 - 2392350
Alignment:
Q  117 ttaagttggttttttgggctttgtgttgtactctttcggtagattgaaggtcgcgaggtttgtgatagctgcatgatcattcgtttaggtgctcttcgaa 216  Q
    |||||||||||||| |||||||||||||| |||||||||| ||| | ||||||||||||||||| ||||||||||||| |||| |||||  |||||| ||    
T  2392524 ttaagttggttttt-gggctttgtgttgtgctctttcggtggatcggaggtcgcgaggtttgtgctagctgcatgatccttcggttaggatctcttcaaa 2392426  T
Q  217 atgtggcttagcttgggtgttaggattttggagtttt-tctttagggtgttcttcatgggtgagtagtgacgatgg 291  Q
    |||||||| |||||||||||| || | | |||||||| | ||   |||||| ||  ||||||||||||||||||||    
T  2392425 atgtggctcagcttgggtgttggggtctaggagttttattttgtaggtgttatttgtgggtgagtagtgacgatgg 2392350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 136 - 291
Target Start/End: Original strand, 53247981 - 53248138
Alignment:
Q  136 tttgtgttgtactctttcggtagattgaaggtcgcgaggtttgtgatagctgcatgatcattcgtttaggtgctcttcgaaatgtggcttagcttgggtg 235  Q
    |||||||||| |||||||||| ||||| ||||||||||||||||||||| || |||||| |||| ||| |||||||||||||||||||| || |||||||    
T  53247981 tttgtgttgtgctctttcggtggattggaggtcgcgaggtttgtgatagttgtatgatccttcggttatgtgctcttcgaaatgtggctcagtttgggtg 53248080  T
Q  236 ttaggattttggagtttttcttt--agggtgttcttcatgggtgagtagtgacgatgg 291  Q
    || || | |  |||||||| |||  || ||||||||  ||||||||||||||||||||    
T  53248081 ttggggtctgagagtttttattttgagagtgttctttgtgggtgagtagtgacgatgg 53248138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 127 - 291
Target Start/End: Original strand, 17551029 - 17551189
Alignment:
Q  127 tttttgggctttgtgttgtactctttcggtagattgaaggtcgcgaggtttgtgatagctgcatgatcattcgtttaggtgctcttcgaaatgtggctta 226  Q
    ||||||||||||||||||| |||||||| |  || | ||||||||||||||||||||||||||||||     | |||||||||||||||||||||||| |    
T  17551029 tttttgggctttgtgttgtgctctttcgatgcatcggaggtcgcgaggtttgtgatagctgcatgat-----ggttaggtgctcttcgaaatgtggctca 17551123  T
Q  227 gcttgggtgttaggattttggagtttt-tctttagggtgttcttcatgggtgagtagtgacgatgg 291  Q
    | ||||||||| || | |  ||||||| | || |||||||||||  | ||||||||||||||||||    
T  17551124 gtttgggtgttggggtctgagagttttattttgagggtgttctttgtcggtgagtagtgacgatgg 17551189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 164 - 291
Target Start/End: Complemental strand, 2394242 - 2394114
Alignment:
Q  164 aggtcgcgaggtttgtgatagctgcatgatcattcgtttaggtgctcttcgaaatgtggcttagcttgggtgttaggattttggagtttt-tctttaggg 262  Q
    ||||||||||||||||| ||||||||||||| |||| |||||  |||||| |||||||||| |||||||||||| || | | |||||||| | ||   ||    
T  2394242 aggtcgcgaggtttgtgctagctgcatgatccttcggttaggatctcttcaaaatgtggctcagcttgggtgttggggtctaggagttttattttgtagg 2394143  T
Q  263 tgttcttcatgggtgagtagtgacgatgg 291  Q
    |||| ||  ||||||||||||||||||||    
T  2394142 tgttatttgtgggtgagtagtgacgatgg 2394114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 119 - 292
Target Start/End: Original strand, 43012440 - 43012613
Alignment:
Q  119 aagttggttttttgggctttgtgttgtactctttcggtagattgaaggtcgcgaggtttgtgatagctgcatgatcattcgtttaggtgctcttcgaaat 218  Q
    ||||||||||||  |  ||||| |||| ||||||||||  ||   ||||||||||||| |||  || ||||||||| |||| | ||||||||||||||||    
T  43012440 aagttggtttttgagcttttgttttgtgctctttcggtgaatcagaggtcgcgaggtt-gtggaagttgcatgatcgttcggtcaggtgctcttcgaaat 43012538  T
Q  219 gtggcttagcttgggtgttaggattttggagtttttcttt-agggtgttcttcatgggtgagtagtgacgatgga 292  Q
    |||||| |||||||||||| || | | ||||||||  ||| |||||||||||    ||||||||||| |||||||    
T  43012539 gtggctcagcttgggtgttggggtctaggagttttaatttgagggtgttctttggaggtgagtagtggcgatgga 43012613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 119 - 294
Target Start/End: Original strand, 19176567 - 19176744
Alignment:
Q  119 aagttggttttttgggctttgtgttgtactctttcggtagattgaaggtcgcgaggtttgtgatagctgcatgatcatt--cgtttaggtgctcttcgaa 216  Q
    |||||||||||| ||  ||||  |||| |||||| ||| ||| | ||||||| ||||| |||  |||||||||||| ||  || | |||||||||||| |    
T  19176567 aagttggtttttgggcttttgatttgtgctcttttggtggatcggaggtcgcaaggtt-gtggaagctgcatgatccttttcggtcaggtgctcttcgta 19176665  T
Q  217 atgtggcttagcttgggtgttaggattttggagtttt-tctttagggtgttcttcatgggtgagtagtgacgatggatg 294  Q
    |||||||| |||||||||||  || | | || ||||| | || ||||||||||| | ||||||||||||||||||||||    
T  19176666 atgtggctcagcttgggtgtcggggtctgggtgttttattttgagggtgttctttaggggtgagtagtgacgatggatg 19176744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 216 - 291
Target Start/End: Complemental strand, 30352359 - 30352285
Alignment:
Q  216 aatgtggcttagcttgggtgttaggattttggagtttttctttagggtgttcttcatgggtgagtagtgacgatgg 291  Q
    ||||||||| |||||||||||| || | | ||||||||| ||||||||||||||  ||| ||||||||||||||||    
T  30352359 aatgtggctcagcttgggtgttggggtctcggagttttt-tttagggtgttctttgtggatgagtagtgacgatgg 30352285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 237
Target Start/End: Complemental strand, 40023590 - 40023472
Alignment:
Q  117 ttaagttggttttttgggctttgtgttgtactctttcggtagattgaaggtcgcgaggtttgtgatagctgcatgatcattcgtttaggtgctcttcgaa 216  Q
    |||||||||||||| ||  ||||| |||| |||||||||| |||   ||| || |||| |||||  ||||||||| ||||||| ||||| ||| |||| |    
T  40023590 ttaagttggtttttgggcttttgttttgtgctctttcggtggatcagaggacgggagg-ttgtggaagctgcatgttcattcggttaggagcttttcg-a 40023493  T
Q  217 atgtggcttagcttgggtgtt 237  Q
    |||||||| |||| |||||||    
T  40023492 atgtggctcagctagggtgtt 40023472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 87; Significance: 1e-41; HSPs: 13)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 127 - 300
Target Start/End: Complemental strand, 47325894 - 47325720
Alignment:
Q  127 tttttgggctttgtgttgtactctttcggtagattgaaggtcgcgaggtttgtgatagctgcatgatcattcgtttaggtgctcttcgaaatgtggctta 226  Q
    ||||||||||||||| ||| |||||||| | ||| | |||||||||||||||||||||||| |||||| |||| |||||||||||||||||||||||| |    
T  47325894 tttttgggctttgtgctgtgctctttcgatggatcggaggtcgcgaggtttgtgatagctgaatgatccttcggttaggtgctcttcgaaatgtggctca 47325795  T
Q  227 gcttgggtgttaggattttggagtttt-tctttagggtgttcttcatgggtgagtagtgacgatggatgatgatg 300  Q
    ||||||||||| || | | |||||||| | || |||||||||||  ||||||||||||||||||||  |||||||    
T  47325794 gcttgggtgttggggtctgggagttttattttgagggtgttctttgtgggtgagtagtgacgatgggcgatgatg 47325720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 127 - 291
Target Start/End: Complemental strand, 5860297 - 5860132
Alignment:
Q  127 tttttgggctttgtgttgtactctttcggtagattgaaggtcgcgaggtttgtgatagctgcatgatcattcgtttaggtgctcttcgaaatgtggctta 226  Q
    ||||||||||||||||||| |||||||||| | | | ||||||||||||||||||||||||||||||| |||  |||||||||||||||||||||||| |    
T  5860297 tttttgggctttgtgttgtgctctttcggtggttcggaggtcgcgaggtttgtgatagctgcatgatccttcagttaggtgctcttcgaaatgtggctca 5860198  T
Q  227 gcttgggtgttaggattttggagtttt-tctttagggtgttcttcatgggtgagtagtgacgatgg 291  Q
    ||||||||||| || | | |||||||| | || |||||||||||  ||| ||||||||||||||||    
T  5860197 gcttgggtgttggggtctgggagttttattttcagggtgttctttgtggatgagtagtgacgatgg 5860132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 127 - 292
Target Start/End: Complemental strand, 44353573 - 44353406
Alignment:
Q  127 tttttgggctttgtgttgtactctttcggtagattgaaggtcgcgaggtttgtgatagctgcatgatcattcgtttaggtgctcttcgaaatgtggctta 226  Q
    ||||||||||||||||||| |||||||||| ||| | ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |       
T  44353573 tttttgggctttgtgttgtgctctttcggtggatcggaggtcgcgaggtttgtgatagctgcatgatccttcggttaggtgctcttcgaaatgtgacccg 44353474  T
Q  227 gcttgggtgttaggattttggagttt--ttctttagggtgttcttcatgggtgagtagtgacgatgga 292  Q
    ||||||||||| || | | |||||||  || || |||||||||||  | |||||||||||||||||||    
T  44353473 gcttgggtgttggggtctgggagttttatttttgagggtgttctttgtaggtgagtagtgacgatgga 44353406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 127 - 269
Target Start/End: Original strand, 37795061 - 37795204
Alignment:
Q  127 tttttgggctttgtgttgtactctttcggtagattgaaggtcgcgaggtttgtgatagctgcatgatcattcgtttaggtgctcttcgaaatgtggctta 226  Q
    ||||||||||||||||||| |||||||||| | | | ||||||||||||||||||||||||||||||| |||| |||||||||||||||| ||||||| |    
T  37795061 tttttgggctttgtgttgtgctctttcggtggttcggaggtcgcgaggtttgtgatagctgcatgatccttcggttaggtgctcttcgaactgtggctca 37795160  T
Q  227 gcttgggtgttaggattttggagtttt-tctttagggtgttctt 269  Q
    ||||||||||| || |||  ||||||| | || |||||||||||    
T  37795161 gcttgggtgttggggtttgagagttttattttgagggtgttctt 37795204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 127 - 291
Target Start/End: Original strand, 38306333 - 38306498
Alignment:
Q  127 tttttgggctttgtgttgtactctttcggtagattgaaggtcgcgaggtttgtgatagctgcatgatcattcgtttaggtgctcttcgaaatgtggctta 226  Q
    ||||||||||||||||||| |||||||| | | | | ||||||||||||||||||||||||||||||| |||| ||| ||||||||||| |||||||| |    
T  38306333 tttttgggctttgtgttgtgctctttcgatggttcggaggtcgcgaggtttgtgatagctgcatgatccttcggttaagtgctcttcgatatgtggctca 38306432  T
Q  227 gcttgggtgttaggattttggagtttt-tctttagggtgttcttcatgggtgagtagtgacgatgg 291  Q
    ||||||||||| || | |  ||||||| | || |||||||||||  | ||||||||||||||||||    
T  38306433 gcttgggtgttggggtctgtgagttttattttgagggtgttctttgtaggtgagtagtgacgatgg 38306498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 127 - 290
Target Start/End: Complemental strand, 3419665 - 3419500
Alignment:
Q  127 tttttgggctttgtgt-tgtactctttcggtagattgaaggtcgcgaggtttgtgatagctgcatgatcattcgtttaggtgctcttcgaaatgtggctt 225  Q
    |||||||||||||| | ||| |||||||||| |||   ||||| | ||||||||||||||||| ||||| |||| |||||||| ||||||| ||||||||    
T  3419665 tttttgggctttgtttctgtgctctttcggtggatcagaggtcacaaggtttgtgatagctgcttgatccttcggttaggtgcgcttcgaattgtggctt 3419566  T
Q  226 agcttgggtgttaggattttggagtttt-tctttagggtgttcttcatgggtgagtagtgacgatg 290  Q
    | |||||||||| || ||| |||||||| | || |||||||||||  || ||||||||||||||||    
T  3419565 aacttgggtgttggggtttgggagttttattttaagggtgttctttgtgagtgagtagtgacgatg 3419500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 127 - 291
Target Start/End: Original strand, 10244254 - 10244419
Alignment:
Q  127 tttttgggctttgtgttgtactctttcggtagattgaaggtcgcgaggtttgtgatagctgcatgatcattcgtttaggtgctcttcgaaatgtggctta 226  Q
    ||||||| ||||||||||| ||||||| || | | | ||||||||||||||||||||| ||||||||| |||| |||||||||||| ||| ||||||| |    
T  10244254 tttttggcctttgtgttgtgctctttcagtggttcggaggtcgcgaggtttgtgatagttgcatgatccttcggttaggtgctctttgaattgtggctca 10244353  T
Q  227 gcttgggtgttaggattttggagtttttctt-tagggtgttcttcatgggtgagtagtgacgatgg 291  Q
    ||||||||||| || | | ||| ||||  ||  |||||| ||||  ||||||||||||||||||||    
T  10244354 gcttgggtgtttgggtctgggatttttagttggagggtggtctttgtgggtgagtagtgacgatgg 10244419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 117 - 291
Target Start/End: Original strand, 25160878 - 25161048
Alignment:
Q  117 ttaagttggttttttgggctttgtgttgtactctttcggtagattgaaggtcgcgaggtttgtgatagctgcatgatcattcgtttaggtgctcttcgaa 216  Q
    |||||||||||||| |||||  ||||||| |||||||||| ||||| ||||| | ||||||||||||||||  ||||| |||  |||||||||||| |||    
T  25160878 ttaagttggttttt-gggct--gtgttgtgctctttcggtggattggaggtctcaaggtttgtgatagctgtgtgatccttcagttaggtgctcttggaa 25160974  T
Q  217 atgtggcttagcttgggtgttaggattttggagtttttctttagggtgttcttcatgggtgagtagtgacgatgg 291  Q
    |||||||| | ||| | |||| || | |  |||||||| || | |||||||||  ||||||||||||||||||||    
T  25160975 atgtggctcaacttagatgttggggtctgagagttttt-ttaaaggtgttctttgtgggtgagtagtgacgatgg 25161048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 186 - 291
Target Start/End: Complemental strand, 31972084 - 31971978
Alignment:
Q  186 tgcatgatcattcgtttaggtgctcttcgaaatgtggcttagcttgggtgttaggattttggagtttt-tctttagggtgttcttcatgggtgagtagtg 284  Q
    ||||||||| |||| |||||||||||||||||||||||| |||||||||||| || | | |||||||| | |  |||||||||||  |||||||||||||    
T  31972084 tgcatgatccttcggttaggtgctcttcgaaatgtggctcagcttgggtgttggggtctgggagttttatttggagggtgttctttgtgggtgagtagtg 31971985  T
Q  285 acgatgg 291  Q
    |||||||    
T  31971984 acgatgg 31971978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 136 - 237
Target Start/End: Original strand, 33435191 - 33435291
Alignment:
Q  136 tttgtgttgtactctttcggtagattgaaggtcgcgaggtttgtgatagctgcatgatcattcgtttaggtgctcttcgaaatgtggcttagcttgggtg 235  Q
    ||||| |||| |||||||||| ||| | ||||||||||||| |||| |||| ||||||| |||| | |||||||||||||| ||||||| ||||||| ||    
T  33435191 tttgttttgtgctctttcggtggatcggaggtcgcgaggtt-gtgaaagctacatgatccttcggtcaggtgctcttcgaattgtggctcagcttggttg 33435289  T
Q  236 tt 237  Q
    ||    
T  33435290 tt 33435291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 292
Target Start/End: Original strand, 3867246 - 3867354
Alignment:
Q  185 ctgcatgatcattcgtttaggtgctcttcgaaatgtggcttagcttgggtgttaggattttggagtttttcttt--agggtgttcttcatgggtgagtag 282  Q
    |||||||||| || | | ||||||||||||| |||||||| |||||||||||| ||| | ||||  |||| |||  |||||||||||   ||||||||||    
T  3867246 ctgcatgatcctttggtcaggtgctcttcgatatgtggctcagcttgggtgtt-ggagtatggaagttttattttgagggtgttctttgggggtgagtag 3867344  T
Q  283 tgacgatgga 292  Q
    ||||||||||    
T  3867345 tgacgatgga 3867354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 237
Target Start/End: Original strand, 34390025 - 34390143
Alignment:
Q  117 ttaagttggttttttgggctttgtgttgtactctttcggtagattgaaggtcgcgaggtttgtgatagctgcatgatcattcgtttaggtgctcttcgaa 216  Q
    |||||||||||||| ||  ||| | |||| |||||||||| ||| | |||||| |||| |||||  ||||||||| ||||||| ||||| ||| ||| ||    
T  34390025 ttaagttggtttttgggcttttattttgtgctctttcggtggatcggaggtcgagagg-ttgtggaagctgcatgttcattcgattaggagcttttc-aa 34390122  T
Q  217 atgtggcttagcttgggtgtt 237  Q
    |||||||| | ||||||||||    
T  34390123 atgtggctcaacttgggtgtt 34390143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 269
Target Start/End: Complemental strand, 41089764 - 41089614
Alignment:
Q  119 aagttggttttttgggctttgtgttgtactctttcggtagattgaaggtcgcgaggtttgtgatagctgcatgatcattcgtttaggtgctcttcgaaat 218  Q
    ||||||||||||  |  ||||| ||||  ||||||||| ||| | ||||||||||||| |||  |||||||||||  |||||| |||||||||||||| |    
T  41089764 aagttggtttttgagcttttgttttgtgatctttcggtggatcggaggtcgcgaggtt-gtggaagctgcatgattcttcgttgaggtgctcttcgaagt 41089666  T
Q  219 gtggcttagcttgggtgttaggattttggagtttt-tctttagggtgttctt 269  Q
    || ||| |   ||||||||||| | | |||||||| | || |||||||||||    
T  41089665 gtagctcaagatgggtgttagggtctgggagttttattttgagggtgttctt 41089614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 86; Significance: 4e-41; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 127 - 291
Target Start/End: Original strand, 10524173 - 10524337
Alignment:
Q  127 tttttgggctttgtgttgtactctttcggtagattgaaggtcgcgaggtttgtgatagctgcatgatcattcgtttaggtgctcttcgaaatgtggctta 226  Q
    ||||||||||||||||||| |||||||||| | | | ||||||||||||||||||||||||||||||| |||| ||||||||||||||| |||||||| |    
T  10524173 tttttgggctttgtgttgtgctctttcggt-gttcggaggtcgcgaggtttgtgatagctgcatgatccttcggttaggtgctcttcgatatgtggctca 10524271  T
Q  227 gcttgggtgttaggattttggagtttt-tctttagggtgttcttcatgggtgagtagtgacgatgg 291  Q
    ||||||||||| || ||| |||||||| | |  |||||||||||  ||||||||||||||||||||    
T  10524272 gcttgggtgttggggtttgggagttttatttggagggtgttctttgtgggtgagtagtgacgatgg 10524337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 127 - 291
Target Start/End: Complemental strand, 39338874 - 39338709
Alignment:
Q  127 tttttgggctttgtgttgtactctttcggtagattgaaggtcgcgaggtttgtgatagctgcatgatcattcgtttaggtgctcttcgaaatgtggctta 226  Q
    ||||||||||||||||||| |||||||||| ||| | |||||||||||||||||||||||| |||||| |||| |||||||||||||||| |||| || |    
T  39338874 tttttgggctttgtgttgtgctctttcggtggatcggaggtcgcgaggtttgtgatagctgaatgatccttcggttaggtgctcttcgaattgtgactca 39338775  T
Q  227 gcttgggtgttaggattttggagtttt-tctttagggtgttcttcatgggtgagtagtgacgatgg 291  Q
    |||||||||||  | | | |||||||| | || |||||||||||  ||||||||||||||||||||    
T  39338774 gcttgggtgttgaggtctgggagttttattttgagggtgttctttgtgggtgagtagtgacgatgg 39338709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 127 - 291
Target Start/End: Complemental strand, 17116889 - 17116723
Alignment:
Q  127 tttttgggctttgtgttgtactctttcggtagattgaaggtcgcgaggtttgtgatagctgcatgatcattcgtttaggtgctcttcgaaatgtggctta 226  Q
    ||||| |||||||| |||| || ||||| ||||||| |||||||||||||||||||| || | |||||  ||| |||||||||||||| ||||||||| |    
T  17116889 tttttaggctttgttttgtgctttttcgatagattggaggtcgcgaggtttgtgatatctacttgatccatcggttaggtgctcttcgtaatgtggctca 17116790  T
Q  227 gcttgggtgttaggattttggagtttttcttt--agggtgttcttcatgggtgagtagtgacgatgg 291  Q
    ||||||||||| || | |  |||||||| |||  |||||||||||  |||||||||| |||||||||    
T  17116789 gcttgggtgttggggtctgagagtttttattttgagggtgttctttgtgggtgagtaatgacgatgg 17116723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 142 - 291
Target Start/End: Original strand, 387262 - 387411
Alignment:
Q  142 ttgtactctttcggtagattgaaggtcgcgaggtttgtgatagctgcatgatcattcgtttaggtgctcttcgaaatgtggcttagcttgggtgttagga 241  Q
    |||| |||||| ||| ||| | ||||| ||||||||  || ||||||||| ||||||  | ||||||||||||| | |||||| |||||||||||| ||     
T  387262 ttgtgctcttttggtggatcggaggtcacgaggttttgga-agctgcatgttcattcagtcaggtgctcttcgataggtggctcagcttgggtgttgggg 387360  T
Q  242 ttttggagtttt-tctttagggtgttcttcatgggtgagtagtgacgatgg 291  Q
    | | |||||||| | || |||||||||||   |||||| ||||||||||||    
T  387361 tctgggagttttattttgagggtgttctttgggggtgaatagtgacgatgg 387411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 81; Significance: 4e-38; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 127 - 292
Target Start/End: Original strand, 20138498 - 20138665
Alignment:
Q  127 tttttgggctttgtgttgtactctttcggtagattgaaggtcgcgaggtttgtgatagctgcatgatcattcgtttaggtgctcttcgaaatgtggctta 226  Q
    ||||||||||||||||||| |||||||||| ||| | ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |       
T  20138498 tttttgggctttgtgttgtgctctttcggtggatcggaggtcgcgaggtttgtgatagctgcatgatccttcggttaggtgctcttcgaaatgtgacccg 20138597  T
Q  227 gcttgggtgttaggattttggagttt--ttctttagggtgttcttcatgggtgagtagtgacgatgga 292  Q
    ||||||||||| || | | |||||||  || || |||||||||||  | |||||||||||||||||||    
T  20138598 gcttgggtgttggggtctgggagttttatttttgagggtgttctttgtaggtgagtagtgacgatgga 20138665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 127 - 291
Target Start/End: Original strand, 9519571 - 9519737
Alignment:
Q  127 tttttgggctttgtgttgtactctttcggtagattgaaggtcgcgaggtttgtgatagctgcatgatcattcgtttaggtgctcttcgaaatgtggctta 226  Q
    ||||||||||||||||||| |||||||||| | | | |||| |||| |||||||||||||||||||||||||| |||||||||||||||||| ||||| |    
T  9519571 tttttgggctttgtgttgtgctctttcggtgggtcggaggttgcgaagtttgtgatagctgcatgatcattcggttaggtgctcttcgaaatatggctca 9519670  T
Q  227 gcttgggtgttaggattttg-gagtttt-tctttagggtgttcttcatgggtgagtagtgacgatgg 291  Q
    ||||||||||| ||  | || ||||||| | || |||||||||||  ||||||||||||||||||||    
T  9519671 gcttgggtgttgggggtctgagagttttattttgagggtgttctttgtgggtgagtagtgacgatgg 9519737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 127 - 290
Target Start/End: Complemental strand, 12898283 - 12898120
Alignment:
Q  127 tttttgggctttgtgttgtactctttcggtagattgaaggtcgcgaggtttgtgatagctgcatgatcattcgtttaggtgctcttcgaaatgtggctta 226  Q
    |||| |||||||||||||| |||||||| | | | | ||||||||||||||||||||||||| ||||| |||| |||||||||||||||||||||||| |    
T  12898283 ttttggggctttgtgttgtgctctttcgatggttcggaggtcgcgaggtttgtgatagctgc-tgatccttcggttaggtgctcttcgaaatgtggctca 12898185  T
Q  227 gcttgggtgttaggattttggagtttt-tctttagggtgttcttcatgggtgagtagtgacgatg 290  Q
    ||||||||||| || | || ||||||| | || |||||||||||  |||||||||||||||||||    
T  12898184 gcttgggtgttggggtcttagagttttattttgagggtgttctttgtgggtgagtagtgacgatg 12898120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 128 - 291
Target Start/End: Complemental strand, 31207370 - 31207206
Alignment:
Q  128 ttttgggctttgtgttgtactctttcggtagattgaaggtcgcgaggtttgtgatagctgcatgatcattcgtttaggtgctcttcgaaatgtggcttag 227  Q
    ||||||| |||||||||| || ||||||| ||| | |||||||||||||||||||||||| |||| | |||| |||||||||||||||||||||||| ||    
T  31207370 ttttgggatttgtgttgtgctttttcggtggatcggaggtcgcgaggtttgtgatagctgaatgacccttcggttaggtgctcttcgaaatgtggctcag 31207271  T
Q  228 cttgggtgttaggattttggagtttt-tctttagggtgttcttcatgggtgagtagtgacgatgg 291  Q
    |||||||||| |  | | |||||||| | || |||||||||||  ||||||||||||||||||||    
T  31207270 cttgggtgttggagtatgggagttttattttgagggtgttctttgtgggtgagtagtgacgatgg 31207206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 127 - 291
Target Start/End: Complemental strand, 37986867 - 37986702
Alignment:
Q  127 tttttgggctttgtgttgtactctttcggtagattgaaggtcgcgaggtttgtgatagctgcatgatcattcgtttaggtgctcttcgaaatgtggctta 226  Q
    |||||| |||||||||||| |||||||||| | | | ||||||||||||||||||||||||| ||||| |||| |||||||||||||||||||||||| |    
T  37986867 tttttgtgctttgtgttgtgctctttcggtggttcggaggtcgcgaggtttgtgatagctgcctgatccttcggttaggtgctcttcgaaatgtggctca 37986768  T
Q  227 gcttgggtgttaggattttggagtttt-tctttagggtgttcttcatgggtgagtagtgacgatgg 291  Q
    |||||||||||  | | | |||||||| | |  |||||||||||  |||||||||| |||||||||    
T  37986767 gcttgggtgtttcggtctgggagttttatttggagggtgttctttgtgggtgagtaatgacgatgg 37986702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 127 - 291
Target Start/End: Complemental strand, 24995404 - 24995238
Alignment:
Q  127 tttttgggctttgtgttgtactctttcggtagattgaaggtcgcgaggtttgtgatagctgcatgatcattcgtttaggtgctcttcgaaatgtggctta 226  Q
    ||||||||||||||||||| ||||||| || | |   ||||||||||||||||||||||||||||||| |||| |||||||||||||||||| ||||| |    
T  24995404 tttttgggctttgtgttgtgctctttcagtgggtcagaggtcgcgaggtttgtgatagctgcatgatccttcggttaggtgctcttcgaaatatggctca 24995305  T
Q  227 gcttgggtgtt-aggattttggagtttt-tctttagggtgttcttcatgggtgagtagtgacgatgg 291  Q
    |||||||||||  || | | |||||||| | || |||||||||||  || |||||||||||||||||    
T  24995304 gcttgggtgttgggggtctaggagttttattttgagggtgttctttgtgcgtgagtagtgacgatgg 24995238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 127 - 291
Target Start/End: Complemental strand, 32066304 - 32066139
Alignment:
Q  127 tttttgggctttgtgttgtactctttcggtagattgaaggtcgcgaggtttgtgatagctgcatgatcattcgtttaggtgctcttcgaaatgtggctta 226  Q
    ||||||||||||||||||| |||||||||| | |   |||| ||||||||||||||||||||||||||||||| |||| ||||||| ||||||||| | |    
T  32066304 tttttgggctttgtgttgtgctctttcggtggttcagaggttgcgaggtttgtgatagctgcatgatcattcggttagatgctctttgaaatgtggttca 32066205  T
Q  227 gcttgggtgttaggattttggagtttt-tctttagggtgttcttcatgggtgagtagtgacgatgg 291  Q
    ||||||||||| || | |  ||||||| | |  |||||||||||  || |||||||||||||||||    
T  32066204 gcttgggtgttggggtctgagagttttatttggagggtgttctttgtgagtgagtagtgacgatgg 32066139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 127 - 291
Target Start/End: Complemental strand, 41893410 - 41893246
Alignment:
Q  127 tttttgggctttgtgttgtactctttcggtagattgaaggtcgcgaggtttgtgatagctgcatgatcattcgtttaggtgctcttcgaaatgtggctta 226  Q
    ||||||||||||||||||| |||||| ||| | |   ||||||| ||||||||||||||||||||||| ||| | ||||| ||||||||||||||||| |    
T  41893410 tttttgggctttgtgttgtgctcttttggtggttaagaggtcgcaaggtttgtgatagctgcatgatccttc-tataggtactcttcgaaatgtggctca 41893312  T
Q  227 gcttgggtgttaggattttggagtt-tttctttagggtgttcttcatgggtgagtagtgacgatgg 291  Q
    |||||||||||  | | | |||||| | | || |||||||||||  ||||||||||||||||||||    
T  41893311 gcttgggtgttgaggtctgggagttctattttcagggtgttctttgtgggtgagtagtgacgatgg 41893246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 127 - 233
Target Start/End: Complemental strand, 16457470 - 16457364
Alignment:
Q  127 tttttgggctttgtgttgtactctttcggtagattgaaggtcgcgaggtttgtgatagctgcatgatcattcgtttaggtgctcttcgaaatgtggctta 226  Q
    ||||| ||||||||||||| |||||||||| | | | | |||| |||||||||||||||||||||||| |  | |||||||||||| ||||||||||| |    
T  16457470 tttttaggctttgtgttgtgctctttcggtggttcggatgtcgtgaggtttgtgatagctgcatgatcttgtggttaggtgctctttgaaatgtggctca 16457371  T
Q  227 gcttggg 233  Q
    |||||||    
T  16457370 gcttggg 16457364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 127 - 289
Target Start/End: Complemental strand, 34389014 - 34388852
Alignment:
Q  127 tttttgggctttgtgttgtactctttcggtagattgaaggtcgcgaggtttgtgatagctgcatgatcattcgtttaggtgctcttcgaaatgtggctta 226  Q
    ||||||||||||||||||| || ||||||| ||| | |||||| ||||||||||||||||   ||||| |||  ||||||| |||||   |||||||| |    
T  34389014 tttttgggctttgtgttgtgctatttcggtggatcgtaggtcgtgaggtttgtgatagct-agtgatccttcagttaggtgttcttcatcatgtggctca 34388916  T
Q  227 gcttgggtgttaggattttggagtttt-tctttagggtgttcttcatgggtgagtagtgacgat 289  Q
    ||||||||||| || | |  ||||||| | || |||||||||||  ||||||||||||||||||    
T  34388915 gcttgggtgttggggtatgagagttttattttgagggtgttctttgtgggtgagtagtgacgat 34388852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 158 - 237
Target Start/End: Original strand, 22773602 - 22773681
Alignment:
Q  158 gattgaaggtcgcgaggtttgtgatagctgcatgatcattcgtttaggtgctcttcgaaatgtggcttagcttgggtgtt 237  Q
    ||||| ||||| |||||||||||||| || ||||||| |||  |||||||||||||||||||||||| || |||||||||    
T  22773602 gattggaggtcacgaggtttgtgatatctacatgatccttctgttaggtgctcttcgaaatgtggctcagtttgggtgtt 22773681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 127 - 224
Target Start/End: Original strand, 36630909 - 36631006
Alignment:
Q  127 tttttgggcttt-gtgttgtactctttcggtagattgaaggtcgcgaggtttgtgatagctgcatgatcattcgtttaggtgctcttcgaaatgtggct 224  Q
    |||||||||||| || |||| |||||||| | ||| | ||||||||||||| |||  |||||||||||| |||| | ||||||||||||||||||||||    
T  36630909 tttttgggcttttgttttgtgctctttcgatggatcggaggtcgcgaggtt-gtgggagctgcatgatccttcggtcaggtgctcttcgaaatgtggct 36631006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 80; Significance: 2e-37; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 117 - 291
Target Start/End: Complemental strand, 24449948 - 24449774
Alignment:
Q  117 ttaagttggttttttgggctttgtgttgtactctttcggtagattgaaggtcgcgaggtttgtgatagctgcatgatcattcgtttaggtgctcttcgaa 216  Q
    |||||||||||||| ||| |||||||||| |||||| ||| ||| | ||||||||||||||||||||| ||||||||| |||| ||||||||||||||||    
T  24449948 ttaagttggttttt-gggatttgtgttgtgctcttttggtggatcggaggtcgcgaggtttgtgatagttgcatgatccttcggttaggtgctcttcgaa 24449850  T
Q  217 atgtggcttagcttgggtgttaggattttggagtttt-tctttagggtgttcttcatgggtgagtagtgacgatgg 291  Q
    ||| |||| |||||||||||| || | | |||||||| | || |||||||| ||  ||||||||||||||||||||    
T  24449849 atgcggctcagcttgggtgttggggtctaggagttttattttgagggtgttatttgtgggtgagtagtgacgatgg 24449774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 127 - 291
Target Start/End: Complemental strand, 46692828 - 46692663
Alignment:
Q  127 tttttgggctttgtgttgtactctttcggtagattgaaggtcgcgaggtttgtgatagctgcatgatcattcgtttaggtgctcttcgaaatgtggctta 226  Q
    ||||||||||||||||||| |||||||||| | | | ||||||||||||||||||||||||||| ||| | || ||| |||||||||||||||||||| |    
T  46692828 tttttgggctttgtgttgtgctctttcggtggttcggaggtcgcgaggtttgtgatagctgcattatcctccggttaagtgctcttcgaaatgtggctca 46692729  T
Q  227 gcttgggtgttaggattttggagtttt-tctttagggtgttcttcatgggtgagtagtgacgatgg 291  Q
    ||||||||||| || | | | |||||| | |  |||||||||||  ||||||||||||||||||||    
T  46692728 gcttgggtgttggggtctggaagttttatttggagggtgttctttgtgggtgagtagtgacgatgg 46692663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 127 - 291
Target Start/End: Original strand, 5459233 - 5459398
Alignment:
Q  127 tttttgggctttgtgttgtactctttcggtagattgaaggtcgcgaggtttgtgatagctgcatgatcattcgtttaggtgctcttcgaaatgtggctta 226  Q
    ||||||||||||||||||| ||||||| || | | | |||| |||||||||||||||||||||||||| |||  |||||||||||| ||||||||||| |    
T  5459233 tttttgggctttgtgttgtgctctttcagtggttcggaggttgcgaggtttgtgatagctgcatgatccttcagttaggtgctctttgaaatgtggctca 5459332  T
Q  227 gcttgggtgttaggattttggagtttt-tctttagggtgttcttcatgggtgagtagtgacgatgg 291  Q
    ||||||||||| || | | | |||||| | || | |||||||||  ||||||||||||||||||||    
T  5459333 gcttgggtgttggggtctggaagttttattttgatggtgttctttgtgggtgagtagtgacgatgg 5459398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 127 - 286
Target Start/End: Complemental strand, 31585769 - 31585608
Alignment:
Q  127 tttttgggctttgtgttgtactctttcggtagattgaaggtcgcgaggtttgtgatagctgcatgatcattcgtttaggtgctcttcgaaatgtggctta 226  Q
    ||||||||||||||||||| || ||||||| | | | |||||||||||||||||||||||| |||||| || | |||||||||||||||||||||||| |    
T  31585769 tttttgggctttgtgttgtgctatttcggtgggtcggaggtcgcgaggtttgtgatagctgtatgatcctttggttaggtgctcttcgaaatgtggctaa 31585670  T
Q  227 gcttgggtgttaggattttg-gagtttt-tctttagggtgttcttcatgggtgagtagtgac 286  Q
    ||||||||||| ||  | || ||||||| | || |||||||||||  |||||||||||||||    
T  31585669 gcttgggtgttgggggtctgagagttttattttgagggtgttctttgtgggtgagtagtgac 31585608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 128 - 289
Target Start/End: Original strand, 41920525 - 41920692
Alignment:
Q  128 ttttgggctttgtgttgtactctttcggtagattgaaggtcgcgaggtttgtgatagctgcatgat-----cattcgtttaggtgctcttcgaaatgtgg 222  Q
    |||||||||||||||||| |||||||||| ||| | ||||||||||||||||||||||||||||||     | |||  |||||||||||||   ||||||    
T  41920525 ttttgggctttgtgttgtgctctttcggtggatcggaggtcgcgaggtttgtgatagctgcatgatcctaaccttcagttaggtgctcttcatcatgtgg 41920624  T
Q  223 cttagcttgggtgttaggattttggagtttt-tctttagggtgttcttcatgggtgagtagtgacgat 289  Q
    || |||||||||||| || | |||||||||| | || |||||||| ||  ||||||||||||||||||    
T  41920625 ctcagcttgggtgttggggtcttggagttttattttgagggtgttttttgtgggtgagtagtgacgat 41920692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 128 - 242
Target Start/End: Complemental strand, 30685912 - 30685798
Alignment:
Q  128 ttttgggctttgtgttgtactctttcggtagattgaaggtcgcgaggtttgtgatagctgcatgatcattcgtttaggtgctcttcgaaatgtggcttag 227  Q
    |||||||||||||||||| |||||||||| | | | ||||||||||||||||||||||||||||||| || | |||||||||| | || |||||||| ||    
T  30685912 ttttgggctttgtgttgtgctctttcggtggttcggaggtcgcgaggtttgtgatagctgcatgatcctttggttaggtgctccttgatatgtggctcag 30685813  T
Q  228 cttgggtgttaggat 242  Q
    |||||||||| ||||    
T  30685812 cttgggtgttgggat 30685798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 127 - 291
Target Start/End: Complemental strand, 5389430 - 5389266
Alignment:
Q  127 tttttgggctttgtgttgtactctttcggtagattgaaggtcgcgaggtttgtgatagctgcatgatcattcgtttaggtgctcttcgaaatgtggctta 226  Q
    ||||||||||||||||||| |||||||||| | | | ||||||||||||||||| ||||| |||| || |||| ||| ||||||||||| |||||||| |    
T  5389430 tttttgggctttgtgttgtgctctttcggtggttcggaggtcgcgaggtttgtgttagctacatggtccttcggttaagtgctcttcgatatgtggctca 5389331  T
Q  227 gcttgggtgttaggattttggagtttt-tctttagggtgttcttcatgggtgagtagtgacgatgg 291  Q
    ||||||||||| || | | |||||||| | || |||||||||||  |  |||||||||||||||||    
T  5389330 gcttgggtgttggggtctgggagttttattttgagggtgttctt-gtaagtgagtagtgacgatgg 5389266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 162 - 292
Target Start/End: Complemental strand, 6764355 - 6764224
Alignment:
Q  162 gaaggtcgcgaggtttgtgatagctgcatgatcattcgtttaggtgctcttcgaaatgtggcttagcttgggtgttaggattttggagtttt-tctttag 260  Q
    ||||| || ||||||||||||||||||||| || |||| |||||||||||||||||||||||| | ||||| |  | || | | |||||||| | || ||    
T  6764355 gaagggcgtgaggtttgtgatagctgcatggtccttcggttaggtgctcttcgaaatgtggctcaacttggatactggggtctgggagttttattttcag 6764256  T
Q  261 ggtgttcttcatgggtgagtagtgacgatgga 292  Q
    | |||||||  |||||||||||||||||||||    
T  6764255 gatgttctttgtgggtgagtagtgacgatgga 6764224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 120 - 224
Target Start/End: Complemental strand, 24684493 - 24684390
Alignment:
Q  120 agttggttttttgggctttgtgttgtactctttcggtagattgaaggtcgcgaggtttgtgatagctgcatgatcattcgtttaggtgctcttcgaaatg 219  Q
    ||||||||||| ||  ||||| |||| |||||||||| ||| | ||||||||||||| |||  || ||||||||| |||| | |||||||||||||||||    
T  24684493 agttggtttttgggcttttgttttgtgctctttcggtggatcggaggtcgcgaggtt-gtggaagatgcatgatccttcggtcaggtgctcttcgaaatg 24684395  T
Q  220 tggct 224  Q
    |||||    
T  24684394 tggct 24684390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 78; Significance: 2e-36; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 127 - 291
Target Start/End: Original strand, 8255099 - 8255264
Alignment:
Q  127 tttttgggctttgtgttgtactctttcggtagattgaaggtcgcgaggtttgtgatagctgcatgatcattcgtttaggtgctcttcgaaatgtggctta 226  Q
    |||||||||||||| |||| |||||||||| ||| | ||||||||||||||||||||||||| |||||  ||  |||||||||||||| ||||||||| |    
T  8255099 tttttgggctttgttttgtgctctttcggtggatcggaggtcgcgaggtttgtgatagctgcttgatccatcagttaggtgctcttcgtaatgtggctca 8255198  T
Q  227 gcttgggtgttaggattttggagtttt-tctttagggtgttcttcatgggtgagtagtgacgatgg 291  Q
    |||||||||||||| | |  ||||||| | || |||||||||||  ||||||||||||||||||||    
T  8255199 gcttgggtgttagggtctgtgagttttattttgagggtgttctttgtgggtgagtagtgacgatgg 8255264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 127 - 291
Target Start/End: Original strand, 8268517 - 8268682
Alignment:
Q  127 tttttgggctttgtgttgtactctttcggtagattgaaggtcgcgaggtttgtgatagctgcatgatcattcgtttaggtgctcttcgaaatgtggctta 226  Q
    |||||||||||||| |||| |||||||||| ||| | ||||||||||||||||||||||||| |||||  ||  |||||||||||||| ||||||||| |    
T  8268517 tttttgggctttgttttgtgctctttcggtggatcggaggtcgcgaggtttgtgatagctgcttgatccatcagttaggtgctcttcgtaatgtggctca 8268616  T
Q  227 gcttgggtgttaggattttggagtttt-tctttagggtgttcttcatgggtgagtagtgacgatgg 291  Q
    |||||||||||||| | |  ||||||| | || |||||||||||  ||||||||||||||||||||    
T  8268617 gcttgggtgttagggtctgtgagttttattttgagggtgttctttgtgggtgagtagtgacgatgg 8268682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 127 - 223
Target Start/End: Original strand, 30964513 - 30964609
Alignment:
Q  127 tttttgggctttgtgttgtactctttcggtagattgaaggtcgcgaggtttgtgatagctgcatgatcattcgtttaggtgctcttcgaaatgtggc 223  Q
    |||||||| |||||||||| |||||| ||| | | | |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  30964513 tttttgggttttgtgttgtgctcttttggtggttcggaggtcgcgaggtttgtgatagctgcatgatcattcggttaggtgctcttcgaaatgtggc 30964609  T

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Target: chr4; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 127 - 287
Target Start/End: Complemental strand, 30167573 - 30167412
Alignment:
Q  127 tttttgggctttgtgttgtactctttcggtagattgaaggtcgcgaggtttgtgatagctgcatgatcattcgtttaggtgctcttcgaaatgtggctta 226  Q
    |||||||| |||||||||| |||||||||| |   | |||||||||||||| |||||||||||||| | |||| ||| | |||||||||||||||||  |    
T  30167573 tttttggggtttgtgttgtgctctttcggtggtccggaggtcgcgaggtttatgatagctgcatgacccttcggttaagcgctcttcgaaatgtggccca 30167474  T
Q  227 gcttgggtgttaggattttggagtttt-tctttagggtgttcttcatgggtgagtagtgacg 287  Q
     |||||||||| || | | |||||||| | || |||||||||||  ||||||||| ||||||    
T  30167473 acttgggtgttggggtatgggagttttattttgagggtgttctttgtgggtgagtggtgacg 30167412  T

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Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 127 - 281
Target Start/End: Original strand, 4305797 - 4305951
Alignment:
Q  127 tttttgggctttgtgttgtactctttcggtagattgaaggtcgcgaggtttgtgatagctgcatgatcattcgtttaggtgctcttcgaaatgtggctta 226  Q
    ||||| ||||||||||||| |||||| ||| |     ||||||| |||||||||||| |||||||||| |||| | |||||||||||| ||||||||| |    
T  4305797 tttttaggctttgtgttgtgctcttttggtggtccagaggtcgcaaggtttgtgataactgcatgatccttcggtgaggtgctcttcg-aatgtggctca 4305895  T
Q  227 gcttgggtgttaggattttggagtttt-tctttagggtgttcttcatgggtgagta 281  Q
     ||||||| || || ||| |||||||| | || |||||| ||||  ||||||||||    
T  4305896 acttgggtatttgggtttgggagttttattttcagggtgatctttgtgggtgagta 4305951  T

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Target: scaffold0343 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 127 - 291
Target Start/End: Original strand, 5777 - 5943
Alignment:
Q  127 tttttgggctttgtgtt-gtactctttcggtagattgaaggtcgcgaggtttgtgatagctgcatgatcattcgtttaggtgctcttcgaaatgtggctt 225  Q
    |||||||||||||| || || |||||||||||||| | ||||||| ||||||||||||||| | ||||| |||| |||||||||||||| |||||||||     
T  5777 tttttgggctttgtttttgtgctctttcggtagatcggaggtcgcaaggtttgtgatagctacttgatccttcggttaggtgctcttcgtaatgtggctc 5876  T
Q  226 agcttgggtgttaggattttggagtttt-tctttagggtgttcttcatgggtgagtagtgacgatgg 291  Q
    |||||||||||| |||| | |||||||| | || |||||||| ||  |||||||||||||| |||||    
T  5877 agcttgggtgttgggatctgggagttttattttgagggtgttttttgtgggtgagtagtgatgatgg 5943  T

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Target: scaffold0068 (Bit Score: 69; Significance: 6e-31; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 117 - 269
Target Start/End: Complemental strand, 35790 - 35640
Alignment:
Q  117 ttaagttggttttttgggctttgtgttgtactctttcggtagattgaaggtcgcgaggtttgtgatagctgcatgatcattcgtttaggtgctcttcgaa 216  Q
    |||||||||||||| ||||||| |||||| |||||||||| ||| | ||||| |||| ||||||||||||||||||||  ||| ||||||||||||||||    
T  35790 ttaagttggttttt-gggctttatgttgtgctctttcggtggatcggaggtcacgagatttgtgatagctgcatgatccatcggttaggtgctcttcgaa 35692  T
Q  217 atgtggcttagcttgggtgttaggattttggagtttttctttagggtgttctt 269  Q
    ||| |||| |||||||||||| || | | ||||||||| ||||| ||||||||    
T  35691 atgaggctcagcttgggtgttggggtgtgggagttttt-tttagagtgttctt 35640  T

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Target: chr6 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 127 - 290
Target Start/End: Original strand, 3117565 - 3117729
Alignment:
Q  127 tttttgggctttgtgttgtactctttcggtagattgaaggtcgcgaggtttgtgatagctgcatgatcattcgtttaggtgctcttcgaaatgtggctta 226  Q
    ||||||||||||||||||| ||||||  || | | | ||||||||||||||||||||| ||||||||| |||| ||| |||||||||||||||||||| |    
T  3117565 tttttgggctttgtgttgtgctctttatgtggttcggaggtcgcgaggtttgtgatagttgcatgatccttcgattatgtgctcttcgaaatgtggctca 3117664  T
Q  227 gcttgggtgttaggattttggagtttt-tctttagggtgttcttcatgggtgagtagtgacgatg 290  Q
     |||||||||| || | | |||||||| | | ||||||||||||  ||||| ||||| |||||||    
T  3117665 acttgggtgttggggtctgggagttttatttatagggtgttctttgtgggtaagtagagacgatg 3117729  T

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Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 190 - 291
Target Start/End: Original strand, 10541967 - 10542069
Alignment:
Q  190 tgatcattcgtttaggtgctcttcgaaatgtggcttagcttgggtgttaggattttggagtttt-tctttagggtgttcttcatgggtgagtagtgacga 288  Q
    ||||| |||| |||||||||||||||||||||||| |||||||||||| || | | | |||||| | |  ||||| |||||  |||||||||||||||||    
T  10541967 tgatccttcggttaggtgctcttcgaaatgtggctcagcttgggtgttggggtctggaagttttatttggagggtattctttgtgggtgagtagtgacga 10542066  T
Q  289 tgg 291  Q
    |||    
T  10542067 tgg 10542069  T

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