View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6501_high_14 (Length: 249)
Name: NF6501_high_14
Description: NF6501
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6501_high_14 |
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Alignment Details
Target: chr6 (Bit Score: 167; Significance: 1e-89; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 1786028 - 1786277
Alignment:
| Q |
1 |
gaaattctggtttggtatattaaatcttaactcttctccttatcaaaccaagtgaagatattcatttatttgcagaccttacttacctctagaccgaaca |
100 |
Q |
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| T |
1786028 |
gaaattctggtttggtatattaaatcttaagtcttctccttaccaaaccaagtgaagatattcatttatttgcagaccttacttacctctagaccgaaca |
1786127 |
T |
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| Q |
101 |
tcagattgtta-------tttctcctagaaaccggagggttaac---nnnnnnnntcttatttgaattttatttgatgttaggtaaggtctataaaggta |
190 |
Q |
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| T |
1786128 |
tcagattgttatgactcctttctcctagaaaccag-gggttaacaaaaaaagaagtcttatttgaattttatttgatgttaggtaaggtctataaaggta |
1786226 |
T |
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| Q |
191 |
caatgaaaaataatcagcaagttgcagtgaagcacataatcaatgatgatg |
241 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1786227 |
caatgaaaaataatcagcaagttgcagtgaagcacataatcaatgatgatg |
1786277 |
T |
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