View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6501_high_17 (Length: 235)
Name: NF6501_high_17
Description: NF6501
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6501_high_17 |
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Alignment Details
Target: chr1 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 12 - 219
Target Start/End: Original strand, 21101457 - 21101664
Alignment:
| Q |
12 |
aacctgtgtggcaagaactaaagtaccaagccagacacctttgaagactccacaacatcatacaaggagtcaatacacaaaacagaagcaagctactatt |
111 |
Q |
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||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
21101457 |
aacctatgtggcaagaactaaagtaccaagccagacaccttggaagactccacaacatcatacaaggagtcaatacacaaaacagaaacaagctactatt |
21101556 |
T |
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| Q |
112 |
agtaataaagttagatctattgattgtaccaacattttgtctaaaattaagtcaagtcccattagtaataagtcaaaattacttgcttaattatattcca |
211 |
Q |
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|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21101557 |
agtaataaagttagatctattgattgtaccaatattttgtctaaaattaagtcaagtcccattagtaataagtcaaaattacttgcttaattatattcca |
21101656 |
T |
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| Q |
212 |
gtagcata |
219 |
Q |
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|||||||| |
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| T |
21101657 |
gtagcata |
21101664 |
T |
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