View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6501_low_15 (Length: 289)
Name: NF6501_low_15
Description: NF6501
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6501_low_15 |
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Alignment Details
Target: chr7 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 47 - 273
Target Start/End: Complemental strand, 37806673 - 37806447
Alignment:
| Q |
47 |
tgattactttgtttaaaaaaggtgannnnnnnccctagaaaaatcaacaaatggactctaaattatccataacatagtattgtttaaacgaacaaaagac |
146 |
Q |
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| T |
37806673 |
tgattactttgtttaaaaaaggtgatttttttccctagaaaaatcaacaaatggactctaaattatccataacatagtattgtttcaacgaacaaaagac |
37806574 |
T |
|
| Q |
147 |
aaaagcttggtattgaatatttcatagataaatgtagtggataaataaaaccaacacaatagattaggtagatgaccctcacacacaaaccctttagtag |
246 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
37806573 |
aaaagcttggtattgaatatttcatagataaatgtagtggataaataaaaccaacacaatagattaggtagatgagcctcacacacaaaccctttagtag |
37806474 |
T |
|
| Q |
247 |
cacaatgaattcaatcaaacatcatag |
273 |
Q |
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||||||||||||||||||||||||||| |
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| T |
37806473 |
cacaatgaattcaatcaaacatcatag |
37806447 |
T |
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