View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6502_high_3 (Length: 502)
Name: NF6502_high_3
Description: NF6502
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6502_high_3 |
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| [»] scaffold0449 (1 HSPs) |
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Alignment Details
Target: scaffold0449 (Bit Score: 54; Significance: 8e-22; HSPs: 1)
Name: scaffold0449
Description:
Target: scaffold0449; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 441 - 494
Target Start/End: Original strand, 9007 - 9060
Alignment:
| Q |
441 |
ttgccaaattctctctcctctgatttttccaccgcgaacggcaagcttcttctc |
494 |
Q |
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| T |
9007 |
ttgccaaattctctctcctctgatttttccaccgcgaacggcaagcttcttctc |
9060 |
T |
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