View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6502_low_13 (Length: 251)
Name: NF6502_low_13
Description: NF6502
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6502_low_13 |
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Alignment Details
Target: chr2 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 2237623 - 2237860
Alignment:
| Q |
1 |
tatggatagccatatttgatctcactcatgtctacaagaataacactcttaacccaaaattattcttgagnnnnnnnnn--gaacttgtaattttgtgtt |
98 |
Q |
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| T |
2237623 |
tatggatagccatatttgatctcactcatgtctacaagaataacactcttaacccaaaattattcttgagaaaaaaaaaaagaacttgtaattttgtgtt |
2237722 |
T |
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| Q |
99 |
ggaatgccagggttttatatatgttatatactcatacacatgttttaggaataaggcaaggagaataaaactagtggagaatattaaaaagaaagctcca |
198 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2237723 |
ggaatgccagggttttatatatgttatatactcatacacatgctttaggaataaggcaaggagaataaaactagtggagaatattaaaaagaaagctcca |
2237822 |
T |
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| Q |
199 |
gaaattatatttcctttcaattcacacattaattggat |
236 |
Q |
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|||||||||||||||||||||||||||||||||||||| |
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| T |
2237823 |
gaaattatatttcctttcaattcacacattaattggat |
2237860 |
T |
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