View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6503_high_8 (Length: 244)
Name: NF6503_high_8
Description: NF6503
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6503_high_8 |
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Alignment Details
Target: chr8 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 4 - 228
Target Start/End: Complemental strand, 2653837 - 2653613
Alignment:
| Q |
4 |
atgaagaacaacatgtgataacaacaaggaaaatagtgaacgaggtaagatttcaacaatgttccactctttctaacaagaacaacnnnnnnngacaaga |
103 |
Q |
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| T |
2653837 |
atgaagaacaacatgtgataacaacaaggaaaatagtgaacgaggtaagatttcaacaatgttccactctttctaacaagaacaacaaaaaaagacaaga |
2653738 |
T |
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| Q |
104 |
agagacaaaaaacaagaatgctgttgttgtttgtttggaacaaaacaatgagaaccctagacaaataaatgatgttgttcataaaaagtttcgcggcgtt |
203 |
Q |
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| T |
2653737 |
agagacaaaaaacaagaatgctgttgttgtttgtttggaacaaaacaatgagaaccctagacaaataaatgatgttgttcatcaaaagtttcgcggcgtt |
2653638 |
T |
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| Q |
204 |
cgacaacgacgatgggggagatttg |
228 |
Q |
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|||| |||||||||||||||||||| |
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| T |
2653637 |
cgacgacgacgatgggggagatttg |
2653613 |
T |
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