View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6503_low_14 (Length: 226)
Name: NF6503_low_14
Description: NF6503
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6503_low_14 |
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Alignment Details
Target: chr8 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 79 - 207
Target Start/End: Complemental strand, 38848240 - 38848115
Alignment:
| Q |
79 |
gaataagggacgtaatacttgttcataatccattgaaggatttgaacctgaacttgtcgctttgcatgagtaccnnnnnnngacaaaagtacgttgcaag |
178 |
Q |
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| T |
38848240 |
gaataagggacgtaatacttgttcataatcaattgaaggctttgaacctgaacttgtcgctttgcatgagtacc---aaaagacaaaagtacgttgcaag |
38848144 |
T |
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| Q |
179 |
ctaaggaaaaaacaatagacatttttctc |
207 |
Q |
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|||||||||||||||||||| |||||||| |
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| T |
38848143 |
ctaaggaaaaaacaatagacctttttctc |
38848115 |
T |
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