View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6506_low_13 (Length: 217)
Name: NF6506_low_13
Description: NF6506
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6506_low_13 |
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Alignment Details
Target: chr7 (Bit Score: 172; Significance: 1e-92; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 44953876 - 44954074
Alignment:
| Q |
1 |
atttgagattccatgccaaatgataatgttcaatattaatagagttttataattgttttatcattcacaagctcccatctatgttgttgttgtcgtcatt |
100 |
Q |
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| T |
44953876 |
atttgagattccatgccaaatgataatgttcaatattaatagagttttataattgttttatcattcacaagctctcatctatgtt---gttgtcgtcatt |
44953972 |
T |
|
| Q |
101 |
gtgattaatgtttgactcttttttatgttatgtgaataaaattactcctctaattcaatctgatacaatgatatttgaagggttgttcgatattgaacat |
200 |
Q |
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|||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44953973 |
gtgattaatgtttgactcttttgtatgttatgtgaataaaatacctcctctaattcaatctgatacaatgatatttgaagggttgttcgatattgaacat |
44954072 |
T |
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