View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6507_high_39 (Length: 209)
Name: NF6507_high_39
Description: NF6507
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6507_high_39 |
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Alignment Details
Target: chr6 (Bit Score: 157; Significance: 1e-83; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 9 - 192
Target Start/End: Complemental strand, 26344422 - 26344238
Alignment:
| Q |
9 |
acatcatcaataaaaggcaatccgttctccataattcctgacataagaacacatattaagtagtaatctcaacacactcatatcttacacttcaacattc |
108 |
Q |
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| T |
26344422 |
acatcctcaataaaaggcaatttgttctccataattcctgacataagaacacatattaagtagtaatctcaacacactcatatcttacacttcaacattc |
26344323 |
T |
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| Q |
109 |
aatcaaatcaaagaaaagtacaatattgaaattgtcaccttcctgttgagcatcc-ttgtggttggcaaattttctgtcatgttt |
192 |
Q |
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||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| |
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| T |
26344322 |
aatcaaatcaaagaaaaatacaatattgaaattgtcaccttcctgttgagcatcctttgcggttggcaaattttctgtcatgttt |
26344238 |
T |
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