View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6507_high_41 (Length: 201)
Name: NF6507_high_41
Description: NF6507
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6507_high_41 |
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Alignment Details
Target: chr7 (Bit Score: 49; Significance: 3e-19; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 134 - 186
Target Start/End: Complemental strand, 32187776 - 32187724
Alignment:
| Q |
134 |
actaacaatatttgtaagtggaactacaactatgcttagattctaaaatattt |
186 |
Q |
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| T |
32187776 |
actaacaatatttgtaagtggaactacaactattcttagattctaaaatattt |
32187724 |
T |
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Target: chr7; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 32187910 - 32187863
Alignment:
| Q |
1 |
caatcattgagggcgcaatatgtaaatgaaaacgatcaagaccttcgc |
48 |
Q |
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| T |
32187910 |
caatcattgagggcgcaatatgtaaatgaaaacgatcaagaccttcgc |
32187863 |
T |
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