View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6507_low_26 (Length: 280)
Name: NF6507_low_26
Description: NF6507
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6507_low_26 |
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Alignment Details
Target: chr1 (Bit Score: 240; Significance: 1e-133; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 1 - 264
Target Start/End: Complemental strand, 2766198 - 2765935
Alignment:
| Q |
1 |
taccgtgtatccaaacataccaaaacaagtcaaatttttaaaactaaatcaacatttgtttaaaatataaaaagtaatgcatgcattgaatcatatgtga |
100 |
Q |
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| T |
2766198 |
taccgtgtatccaaacataccaaaacaagtcaaatttttaaaactaaatcaacatttgtttaaaatataaaaagttatgcatgcattgaatcatatgtga |
2766099 |
T |
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| Q |
101 |
aaataatgggatcgtagtgtcagatatcatacacatgtgagagaaagagaacatagttaagttcatgaggtaaatgctcgttaaaaaacatcttgattgg |
200 |
Q |
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| T |
2766098 |
aaacaatgggatcgtagtgtcagatatcatacacatgtgagagaaagagaacatagttaagttcatgaggtaaatgctcgttaaaaaacatcttgattgg |
2765999 |
T |
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| Q |
201 |
taaaatatagtatggttcagtgtgtacacaataatcctatttgtagagtaagggtgcagtaact |
264 |
Q |
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| T |
2765998 |
taaaagatagtatggttcggtgtgtacacaataatcctacttgtagagtaagggtgcactaact |
2765935 |
T |
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