View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6507_low_27 (Length: 275)
Name: NF6507_low_27
Description: NF6507
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6507_low_27 |
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Alignment Details
Target: chr8 (Bit Score: 244; Significance: 1e-135; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 18 - 265
Target Start/End: Complemental strand, 31509238 - 31508991
Alignment:
| Q |
18 |
accaatttttctccttctaagaacagattgaagctcttcaacttttcctttcattaacaaaacatcatctcttgttttgctcaaaaggtctaagaatcta |
117 |
Q |
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| T |
31509238 |
accaacttttctccttctaagaacagattgaagctcttcaacttttcctttcattaacaaaacatcatctcttgttttgctcaaaaggtctaagaatcta |
31509139 |
T |
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| Q |
118 |
agtggaaaatctaacaactcatccacccatttctcatttttgtgttgagataatgcttgttgtgttagtggcaattttagaagatgttctatgcatttgt |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31509138 |
agtggaaaatctaacaactcatccacccatttctcatttttgtgttgagataatgcttgttgtgttagtggcaattttagaagatgttctatgcatttgt |
31509039 |
T |
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| Q |
218 |
acaattctgttaggccagagagaccaaaacaaattgtttcaacctttg |
265 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31509038 |
acaattctgttaggccagagagaccaaaacaaattgtttcaacctttg |
31508991 |
T |
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