View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF6510_high_1 (Length: 929)
Name: NF6510_high_1
Description: NF6510
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6510_high_1 |
 | |
|
| [»] scaffold0345 (1 HSPs) |
| | |
|
| [»] scaffold0105 (5 HSPs) |
| | |
|
| [»] scaffold1330 (1 HSPs) |
| | |
|
| [»] scaffold0496 (1 HSPs) |
| | |
|
Alignment Details
Target: chr4 (Bit Score: 829; Significance: 0; HSPs: 5)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 829; E-Value: 0
Query Start/End: Original strand, 19 - 919
Target Start/End: Original strand, 7457511 - 7458411
Alignment:
| Q |
19 |
agaagaacatcgggtttacttctcttgtgatctacttaaatgggaggcatttgatccaaatcgtggtcgatttattcaattgcctaaaattccttgtgat |
118 |
Q |
| |
|
|||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7457511 |
agaagaacattgggtttacttctcttgtgatttacttaaatgggaggcatttgatccaagtcgtggtcgatttattcaattgcctaaaattccttgtgat |
7457610 |
T |
|
| Q |
119 |
aaagtttttatgttgtgtgataaggagtcgctggctgtcggtactgagcttctagtttttggaagggaattgatgggtcctaccattcataagtatgact |
218 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7457611 |
aaagtttttatgttgtgtgataaggagtcgttggctgtcggtactgagcttctagtttttggaagggaattgatgggtcctaccattcataagtatgact |
7457710 |
T |
|
| Q |
219 |
atctatcaaatacgtggtcaattggaaaaatgttgaatactccaagatgctcgttcggttcatccagccttggagaaattgcaatattagcaggtgggtg |
318 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
7457711 |
atctatcaaatacgtggtcaattggaaaaatgttgaatactccaagatgctcgttcggttcatccagccttggagaaattgcaatattagcaggtggttg |
7457810 |
T |
|
| Q |
319 |
tgatccatgtggcaacatcttgagctcagctgagctttacaactcagacactggaaaatgagaaacccttccagacatgaataaagcaagaaaaatgtgt |
418 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
7457811 |
tgatccatgtggcaacatcttgagctcagctgagatttacaactcagacactggaaaatgggaaacccttccaaacatgaataaagcaagaaaaatgtgt |
7457910 |
T |
|
| Q |
419 |
tcgggtgtatttatggatggaaaattttatgtccttggtggaattggagctgataaaacaacaccacttacatgtggtgaggaatttgatataaagagaa |
518 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7457911 |
tcgggtgtatttatggatgaaaaattttatgtccttggtggaattggagctgataaaacaacaccacttacatgtggtgaggaatttgatataaagagaa |
7458010 |
T |
|
| Q |
519 |
aagaatggcgtgaaatacccaacatgttcccagtgccaactggagtattggaggcaccaccatcttatggaccacctcctttgattgcagttgtaaaaaa |
618 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
7458011 |
aagaatggcgtgaaatacccaacatgttcccaatgccaactggagtattggaggcaccaccatcttatggaccacctcccttgattgcagttgtaaaaaa |
7458110 |
T |
|
| Q |
619 |
tgtattgtataatgctgattacgcaacaaaggaagtaaaaaagtataataaaaacaataactcttgggttaccattggaagatttcctgagcaagccact |
718 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7458111 |
tgtattgtataatgctgattacgcaacaaaggaagtaaagaagtatgataaaaacaataactcttgggttaccattggaagatttcctgagcaagccacc |
7458210 |
T |
|
| Q |
719 |
tcaatgaaaggttggggattagcctttcgtgcatgtggagatatgctaatttttctgggaggtcccattcttcattgtagaggcatgttggaaatcaatg |
818 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7458211 |
tcaatgaaaggttggggattagcttttcgtgcatgtggagatatgctaatttttcttggaggtcccattcttcattgtagaggcatgttggaaatcaatg |
7458310 |
T |
|
| Q |
819 |
cttgggtcccaaatgaaagagcgatacaatggaatcaacttgcgagaaagaaaatagggagctttgtgtatagttgcattgtgatgggatgttgatgatg |
918 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
7458311 |
cttgggtcccaaatgaaagagcgatacaatggaatcaacttgcaagaaagaaaatagggagctttgtgtatagttgcactgtgatgggatgttgatgatg |
7458410 |
T |
|
| Q |
919 |
t |
919 |
Q |
| |
|
| |
|
|
| T |
7458411 |
t |
7458411 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 603; E-Value: 0
Query Start/End: Original strand, 22 - 919
Target Start/End: Original strand, 7411435 - 7412333
Alignment:
| Q |
22 |
agaacatcgggtttacttctcttgtgatctacttaaatgggaggcatttgatccaaatcgtggtcgatttattcaattgcctaaaattccttgtgataaa |
121 |
Q |
| |
|
||||||| ||||||||||||||| ||| ||| | |||||||| ||||||||||||||| ||||| || || ||||||| ||| |||||||| || |
|
|
| T |
7411435 |
agaacattgggtttacttctcttctgaagcccttgagtgggaggcttttgatccaaatcgtaatcgatggatgcatttgcctataatgacttgtgatcaa |
7411534 |
T |
|
| Q |
122 |
gtttttatgttgtgtgataaggagtcgctggctgtcggtactgagcttctagtttttggaagggaattgatgggtcctaccattcataagtatgactatc |
221 |
Q |
| |
|
||||| ||||| |||| ||| || ||||||| ||||||||||||||||| ||||||| |||||| |||| ||||| ||||||||||||| ||| || |
|
|
| T |
7411535 |
tgttttacgttgtcagatagggaatcattggctgttggtactgagcttctagtctttggaaaggaattaatggctcctatcattcataagtataactttc |
7411634 |
T |
|
| Q |
222 |
tatcaaatacgtggtcaattggaaaaatgttgaatactccaagatgctcgttcggttcatccagccttggagaaattgcaatattagcaggtgggtgtga |
321 |
Q |
| |
|
| |||||| ||||||| ||||||||||| |||||||||||||||||| ||| ||||| | || |||||||||||||||||| |||| ||||| ||||| |
|
|
| T |
7411635 |
tgacaaatatgtggtcagttggaaaaatgatgaatactccaagatgcttgtttggttcggctagtcttggagaaattgcaatactagctggtggttgtga |
7411734 |
T |
|
| Q |
322 |
tccatgtggcaacatcttgagctcagctgagctttacaactcagacactggaaaatgagaaacccttccagacatgaataaagcaagaaaaatgtgttcg |
421 |
Q |
| |
|
|||| |||||| ||| |||||||| |||||||| || ||| |||| |||||||| || |||||||||||| ||||||||||||||||||||||||||| | |
|
|
| T |
7411735 |
tccacgtggcagcatattgagctctgctgagctctataacgcagatactggaaattgggaaacccttccaaacatgaataaagcaagaaaaatgtgttgg |
7411834 |
T |
|
| Q |
422 |
ggtgtatttatggatggaaaattttatgtccttggtggaattggagctgataaaacaacaccacttacatgtggtgaggaatttgatataaagagaaaag |
521 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7411835 |
ggtgtatttatggatgaaaaattttatgtccttggtggaattggagctgataaaacaacaccacttacatgtggtgaggaatttgatataaagagaaaag |
7411934 |
T |
|
| Q |
522 |
aatggcgtgaaatacccaacatgttcccagtgccaactggagtattggaggcaccaccatcttatggaccacctcctttgattgcagttgtaaaaaatgt |
621 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
7411935 |
aatggcgtgaaatacccaacatgttcccaatgccaactggagtattggaggcaccaccatcttatggaccacctcccttgattgcagttgtaaaaaatgt |
7412034 |
T |
|
| Q |
622 |
attgtataatgctgattacgcaacaaaggaagtaaaaaagtataataaaaacaataactcttgggttaccattggaagatttcctgagcaagccacttca |
721 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
7412035 |
attgtataatgctgattacgcaacaaaggaagtaaagaagtatgataaaaacaataactcttgggttaccattggaagatttcctgagcaagccacctca |
7412134 |
T |
|
| Q |
722 |
atgaaaggttggggattagcctttcgtgcatgtggagatatgctaatttttctgggaggtcccattcttcattgtagaggcatgttggaaatcaatgctt |
821 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7412135 |
atgaaaggttggggattagcttttcgtgcatgtggagatatgctaatttttcttggaggtcccattcttcattgtagaggcatgttggaaatcaatgctt |
7412234 |
T |
|
| Q |
822 |
gggtcccaaatgaaagagcgatacaatggaatcaacttgcgagaaagaaaatagggagctttgtgtatagttgcattgtgatgggatg-ttgatgatgt |
919 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| |
|
|
| T |
7412235 |
gggtcccaaatgaaagagcgatacaatggaatcaacttgcaagaaagaaaatagggagctttgtgtatagttgcactgtgatgggatgtttgatgatgt |
7412333 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 23 - 508
Target Start/End: Original strand, 44919571 - 44920056
Alignment:
| Q |
23 |
gaacatcgggtttacttctcttgtgatctacttaaatgggaggcatttgatccaaatcgtggtcgatttattcaattgcctaaaattccttgtgataaag |
122 |
Q |
| |
|
|||||| |||||||||| ||||||||| | |||||||||||||| | |||||||||||||| ||| || || ||| |||| ||||| || | ||| | |
|
|
| T |
44919571 |
gaacattgggtttacttttcttgtgatgtccttaaatgggaggcctatgatccaaatcgtgatcggttgatgcaactgccgaaaatgagttctaatatat |
44919670 |
T |
|
| Q |
123 |
tttttatgttgtgtgataaggagtcgctggctgtcggtactgagcttctagtttttggaagggaattgatgggtcctaccattcataagtatgactatct |
222 |
Q |
| |
|
||||||| | | || |||||||| || ||||| ||||| |||||||| ||||||||||| ||| | | || | | |||| |||||||| | ||| |
|
|
| T |
44919671 |
gttttatgctttcagacaaggagtcactagctgttggtacggagcttcttgtttttggaagagaaataactggccttgccatatataagtatagcattct |
44919770 |
T |
|
| Q |
223 |
atcaaatacgtggtcaattggaaaaatgttgaatactccaagatgctcgttcggttcatccagccttggagaaattgcaatattagcaggtgggtgtgat |
322 |
Q |
| |
|
||||| | |||| | |||| | |||||||||| ||||||| ||| ||||| ||||||| |||||||||||||||||||| ||||| |||||| |
|
|
| T |
44919771 |
gacaaattcatggttgaagggaatgaaaatgaatactcctagatgcttgtttggttctgccagcctcggagaaattgcaatattagccggtggttgtgat |
44919870 |
T |
|
| Q |
323 |
ccatgtggcaacatcttgagctcagctgagctttacaactcagacactggaaaatgagaaacccttccagacatgaataaagcaagaaaaatgtgttcgg |
422 |
Q |
| |
|
| | ||||||||| |||||||| |||||||||| |||||||| || || | ||| || |||||||||||||| | |||| | ||||||||| | |
|
|
| T |
44919871 |
caacatggcaacatattgagctcttctgagctttataactcagataccggcacatgggaggttcttccagacatgaacacgccaaggagaatgtgttcag |
44919970 |
T |
|
| Q |
423 |
gtgtatttatggatggaaaattttatgtccttggtggaattggagctgataaaacaacaccacttacatgtggtgaggaatttgat |
508 |
Q |
| |
|
|| |||||||||| |||||||||||||||||| ||| |||||| ||| |||||||||| ||| || |||||||| || |||||| |
|
|
| T |
44919971 |
ccgtgtttatggatgaaaaattttatgtccttggcggagttggagttgacaaaacaacacaactaacttgtggtgaagagtttgat |
44920056 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 848 - 915
Target Start/End: Original strand, 13031387 - 13031454
Alignment:
| Q |
848 |
tggaatcaacttgcgagaaagaaaatagggagctttgtgtatagttgcattgtgatgggatgttgatg |
915 |
Q |
| |
|
||||||||||||||||||||| || ||||||||||||| ||| |||| |||||||||||||||||| |
|
|
| T |
13031387 |
tggaatcaacttgcgagaaagcaatcagggagctttgtgcataactgcactgtgatgggatgttgatg |
13031454 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 844 - 915
Target Start/End: Complemental strand, 7419439 - 7419368
Alignment:
| Q |
844 |
acaatggaatcaacttgcgagaaagaaaatagggagctttgtgtatagttgcattgtgatgggatgttgatg |
915 |
Q |
| |
|
|||||||||||| |||||||||||| || ||||||||||||| ||| |||| ||||||||||| |||||| |
|
|
| T |
7419439 |
acaatggaatcagcttgcgagaaagcaatcagggagctttgtgcataactgcactgtgatgggatattgatg |
7419368 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0345 (Bit Score: 298; Significance: 1e-167; HSPs: 1)
Name: scaffold0345
Description:
Target: scaffold0345; HSP #1
Raw Score: 298; E-Value: 1e-167
Query Start/End: Original strand, 22 - 915
Target Start/End: Complemental strand, 4213 - 3320
Alignment:
| Q |
22 |
agaacatcgggtttacttctcttgtgatctacttaaatgggaggcatttgatccaaatcgtggtcgatttattcaattgcctaaaattccttgtgataaa |
121 |
Q |
| |
|
||||||| |||| |||||||||| ||| |||||||||||||| ||||||||||||||| ||||| || || ||||| ||||| |||||||| | |
|
|
| T |
4213 |
agaacattgggtgtacttctcttctgaagcccttaaatgggaggcttttgatccaaatcgtaatcgatggatacatttgccaaaaatgacttgtgatgca |
4114 |
T |
|
| Q |
122 |
gtttttatgttgtgtgataaggagtcgctggctgtcggtactgagcttctagtttttggaagggaattgatgggtcctaccattcataagtatgactatc |
221 |
Q |
| |
|
|||| | || |||| ||| ||| ||||||| ||||||||||||||||| ||||||| |||||| |||| ||||| ||||||||||||| | || |
|
|
| T |
4113 |
tgtttttcgctggcagatagggaatcgttggctgttggtactgagcttctagtctttggaaaggaattaatggatcctatcattcataagtatagccttc |
4014 |
T |
|
| Q |
222 |
tatcaaatacgtggtcaattggaaaaatgttgaatactccaagatgctcgttcggttcatccagccttggagaaattgcaatattagcaggtgggtgtga |
321 |
Q |
| |
|
| |||||| ||||||| ||||||| ||| |||||||||| ||||||| ||| ||||| | || |||||||||||||||||| |||| ||||| ||||| |
|
|
| T |
4013 |
tgacaaatatgtggtcagttggaaatatgatgaatactccgagatgcttgtttggttcggctagtcttggagaaattgcaatactagccggtggttgtga |
3914 |
T |
|
| Q |
322 |
tccatgtggcaacatcttgagctcagctgagctttacaactcagacactggaaaatgagaaacccttccagacatgaataaagcaagaaaaatgtgttcg |
421 |
Q |
| |
|
||||||||||||||| |||||||| |||||||| || ||| ||||||||||||| || | ||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
3913 |
tccatgtggcaacatattgagctctgctgagctctataacgcagacactggaaattggaagacccttccaaacatgaataaagcaagaaaaatgtgttca |
3814 |
T |
|
| Q |
422 |
ggtgtatttatggatggaaaattttatgtccttggtggaattggagctgataaaacaacaccacttacatgtggtgaggaatttgatataaagagaaaag |
521 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||| || | |||||| |||| ||||| ||||||||||| ||||| |||||||| |||| |||| |
|
|
| T |
3813 |
agtgtattcatggatggaaaattttatgtccttggtgggatagcagctgacaaaaaaacacagcttacatgtggggaggagtttgatatgaagacaaaaa |
3714 |
T |
|
| Q |
522 |
aatggcgtgaaatacccaacatgttcccagtgccaactggagtattggaggcaccaccatcttatggaccacctcctttgattgcagttgtaaaaaatgt |
621 |
Q |
| |
|
|||||||||||||||| ||||||||||| || | ||||||||| || ||| ||||||| |||| ||| ||||||||||||||||||||||||||||||| |
|
|
| T |
3713 |
aatggcgtgaaatacctaacatgttccccgtacgaactggagtgtttgagacaccaccttcttttgggtcacctcctttgattgcagttgtaaaaaatgt |
3614 |
T |
|
| Q |
622 |
attgtataatgctgattacg--caacaaaggaagtaaaaaagtataataaaaacaataactcttgggttaccattggaagatttcctgagcaagccactt |
719 |
Q |
| |
|
||||||| ||| ||||| | ||||||| ||||||| |||||| ||||| |||| ||||||||||| | ||||||||| ||||| |||||||| |||| |
|
|
| T |
3613 |
attgtatgctgcagattatggacaacaaa--aagtaaagaagtatgataaagacaacaactcttgggtcatcattggaagctttcccgagcaagctactt |
3516 |
T |
|
| Q |
720 |
caatgaaaggttggggattagcctttcgtgcatgtggagatatgctaatttttctgggaggtcccattcttcattgtagaggcatgttggaaatcaatgc |
819 |
Q |
| |
|
| ||||| |||||||||||||||||||| ||||| |||||| ||| | ||||| |||||||| || ||||| || | ||| ||||||||||||| |
|
|
| T |
3515 |
cgatgaatggttggggattagcctttcgagcatgcggagatcatctattatttcttggaggtcctgttattcatggtgcaataatgatggaaatcaatgc |
3416 |
T |
|
| Q |
820 |
ttgggtcccaaatgaaagagcgatacaatggaatcaacttgcgagaaagaaaatagggagctttgtgtatagttgcattgtgatgggatgttgatg |
915 |
Q |
| |
|
|||| ||||||||||| ||| | ||||||||||| ||||| |||| || |||| | |||||| ||| ||| | |||||||||||||||||| |
|
|
| T |
3415 |
ttggatcccaaatgaaggagagccacaatggaatcggcttgcaggaaatcaatcagggggttttgtgcataattgtactgtgatgggatgttgatg |
3320 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0105 (Bit Score: 298; Significance: 1e-167; HSPs: 5)
Name: scaffold0105
Description:
Target: scaffold0105; HSP #1
Raw Score: 298; E-Value: 1e-167
Query Start/End: Original strand, 22 - 915
Target Start/End: Original strand, 34766 - 35659
Alignment:
| Q |
22 |
agaacatcgggtttacttctcttgtgatctacttaaatgggaggcatttgatccaaatcgtggtcgatttattcaattgcctaaaattccttgtgataaa |
121 |
Q |
| |
|
||||||| |||| |||||||||| ||| |||||||||||||| ||||||||||||||| ||||| || || ||||| ||||| |||||||| | |
|
|
| T |
34766 |
agaacattgggtgtacttctcttctgaagcccttaaatgggaggcttttgatccaaatcgtaatcgatggatacatttgccaaaaatgacttgtgatgca |
34865 |
T |
|
| Q |
122 |
gtttttatgttgtgtgataaggagtcgctggctgtcggtactgagcttctagtttttggaagggaattgatgggtcctaccattcataagtatgactatc |
221 |
Q |
| |
|
|||| | || |||| ||| ||| ||||||| ||||||||||||||||| ||||||| |||||| |||| ||||| ||||||||||||| | || |
|
|
| T |
34866 |
tgtttttcgctggcagatagggaatcgttggctgttggtactgagcttctagtctttggaaaggaattaatggatcctatcattcataagtatagccttc |
34965 |
T |
|
| Q |
222 |
tatcaaatacgtggtcaattggaaaaatgttgaatactccaagatgctcgttcggttcatccagccttggagaaattgcaatattagcaggtgggtgtga |
321 |
Q |
| |
|
| |||||| ||||||| ||||||| ||| |||||||||| ||||||| ||| ||||| | || |||||||||||||||||| |||| ||||| ||||| |
|
|
| T |
34966 |
tgacaaatatgtggtcagttggaaatatgatgaatactccgagatgcttgtttggttcggctagtcttggagaaattgcaatactagccggtggttgtga |
35065 |
T |
|
| Q |
322 |
tccatgtggcaacatcttgagctcagctgagctttacaactcagacactggaaaatgagaaacccttccagacatgaataaagcaagaaaaatgtgttcg |
421 |
Q |
| |
|
||||||||||||||| |||||||| |||||||| || ||| ||||||||||||| || | ||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
35066 |
tccatgtggcaacatattgagctctgctgagctctataacgcagacactggaaattggaagacccttccaaacatgaataaagcaagaaaaatgtgttca |
35165 |
T |
|
| Q |
422 |
ggtgtatttatggatggaaaattttatgtccttggtggaattggagctgataaaacaacaccacttacatgtggtgaggaatttgatataaagagaaaag |
521 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||| || | |||||| |||| ||||| ||||||||||| ||||| |||||||| |||| |||| |
|
|
| T |
35166 |
agtgtattcatggatggaaaattttatgtccttggtgggatagcagctgacaaaaaaacacagcttacatgtggggaggagtttgatatgaagacaaaaa |
35265 |
T |
|
| Q |
522 |
aatggcgtgaaatacccaacatgttcccagtgccaactggagtattggaggcaccaccatcttatggaccacctcctttgattgcagttgtaaaaaatgt |
621 |
Q |
| |
|
||||| |||||||||| ||||||||||| || | ||||||||| || ||| ||||||| |||| ||| ||||||||||||||||||||||||||||||| |
|
|
| T |
35266 |
aatggtgtgaaatacctaacatgttccccgtacgaactggagtgtttgagacaccaccttcttttgggtcacctcctttgattgcagttgtaaaaaatgt |
35365 |
T |
|
| Q |
622 |
attgtataatgctgattacg--caacaaaggaagtaaaaaagtataataaaaacaataactcttgggttaccattggaagatttcctgagcaagccactt |
719 |
Q |
| |
|
||||||| ||| ||||| | ||||||| ||||||| |||||| ||||| |||| ||||||||||| | ||||||||| ||||| |||||||| |||| |
|
|
| T |
35366 |
attgtatgctgcagattatggacaacaaa--aagtaaagaagtatgataaagacaacaactcttgggtcatcattggaagctttcccgagcaagctactt |
35463 |
T |
|
| Q |
720 |
caatgaaaggttggggattagcctttcgtgcatgtggagatatgctaatttttctgggaggtcccattcttcattgtagaggcatgttggaaatcaatgc |
819 |
Q |
| |
|
| ||||| |||||||||||||||||||| ||||| |||||| ||| | ||||| |||||||| || ||||| || || ||| ||||||||||||| |
|
|
| T |
35464 |
cgatgaatggttggggattagcctttcgagcatgcggagatcatctattatttcttggaggtcctgttattcatggtggaataatgatggaaatcaatgc |
35563 |
T |
|
| Q |
820 |
ttgggtcccaaatgaaagagcgatacaatggaatcaacttgcgagaaagaaaatagggagctttgtgtatagttgcattgtgatgggatgttgatg |
915 |
Q |
| |
|
|||| ||||||||||| ||| | ||||||||||| ||||| |||| || |||| | |||||| ||| ||| | |||||||||||||||||| |
|
|
| T |
35564 |
ttggatcccaaatgaaggagagccacaatggaatcggcttgcaggaaatcaatcagggggttttgtgcataattgtactgtgatgggatgttgatg |
35659 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0105; HSP #2
Raw Score: 295; E-Value: 1e-165
Query Start/End: Original strand, 53 - 915
Target Start/End: Complemental strand, 10377 - 9515
Alignment:
| Q |
53 |
cttaaatgggaggcatttgatccaaatcgtggtcgatttattcaattgcctaaaattccttgtgataaagtttttatgttgtgtgataaggagtcgctgg |
152 |
Q |
| |
|
|||||||||||||| ||||||||||||||| ||||| || || ||||| ||||| |||||||| | |||| | || |||| ||| ||| ||| |
|
|
| T |
10377 |
cttaaatgggaggcttttgatccaaatcgtaatcgatggatacatttgccaaaaatgacttgtgatgcatgtttttcgctggcagatagggaatcgttgg |
10278 |
T |
|
| Q |
153 |
ctgtcggtactgagcttctagtttttggaagggaattgatgggtcctaccattcataagtatgactatctatcaaatacgtggtcaattggaaaaatgtt |
252 |
Q |
| |
|
|||| ||||||||||||||||| ||||||| |||||| |||| ||||| ||||||||||||| | ||| |||||| ||||||| ||||||| ||| | |
|
|
| T |
10277 |
ctgttggtactgagcttctagtctttggaaaggaattaatggatcctatcattcataagtatagccttctgacaaatatgtggtcagttggaaatatgat |
10178 |
T |
|
| Q |
253 |
gaatactccaagatgctcgttcggttcatccagccttggagaaattgcaatattagcaggtgggtgtgatccatgtggcaacatcttgagctcagctgag |
352 |
Q |
| |
|
||||||||| ||||||| ||| ||||| | || |||||||||||||||||| |||| ||||| |||||||||||||||||||| |||||||| |||||| |
|
|
| T |
10177 |
gaatactccgagatgcttgtttggttcggctagtcttggagaaattgcaatactagccggtggttgtgatccatgtggcaacatattgagctctgctgag |
10078 |
T |
|
| Q |
353 |
ctttacaactcagacactggaaaatgagaaacccttccagacatgaataaagcaagaaaaatgtgttcgggtgtatttatggatggaaaattttatgtcc |
452 |
Q |
| |
|
|| || ||| ||||||||||||| || | ||||||||| |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| |
|
|
| T |
10077 |
ctctataacgcagacactggaaattggaagacccttccaaacatgaataaagcaagaaaaatgtgttcaagtgtattcatggatggaaaattttatgtcc |
9978 |
T |
|
| Q |
453 |
ttggtggaattggagctgataaaacaacaccacttacatgtggtgaggaatttgatataaagagaaaagaatggcgtgaaatacccaacatgttcccagt |
552 |
Q |
| |
|
||||||| || | |||||| |||| ||||| ||||||||||| ||||| |||||||| |||| |||| |||||||||||||||| ||||||||||| || |
|
|
| T |
9977 |
ttggtgggatagcagctgacaaaaaaacacagcttacatgtggggaggagtttgatatgaagacaaaaaaatggcgtgaaatacctaacatgttccccgt |
9878 |
T |
|
| Q |
553 |
gccaactggagtattggaggcaccaccatcttatggaccacctcctttgattgcagttgtaaaaaatgtattgtataatgctgattacg--caacaaagg |
650 |
Q |
| |
|
| ||||||||| || ||| ||||||| |||| ||| |||||||||||||||||||||||||||||||||||||| ||| ||||| | ||||||| |
|
|
| T |
9877 |
acgaactggagtgtttgagacaccaccttcttttgggtcacctcctttgattgcagttgtaaaaaatgtattgtatgctgcagattatggacaacaaa-- |
9780 |
T |
|
| Q |
651 |
aagtaaaaaagtataataaaaacaataactcttgggttaccattggaagatttcctgagcaagccacttcaatgaaaggttggggattagcctttcgtgc |
750 |
Q |
| |
|
||||||| |||||| ||||| |||| ||||||||||| | ||||||||| ||||| |||||||| ||||| ||||| |||||||||||||||||||| || |
|
|
| T |
9779 |
aagtaaagaagtatgataaagacaacaactcttgggtcatcattggaagctttcccgagcaagctacttcgatgaatggttggggattagcctttcgagc |
9680 |
T |
|
| Q |
751 |
atgtggagatatgctaatttttctgggaggtcccattcttcattgtagaggcatgttggaaatcaatgcttgggtcccaaatgaaagagcgatacaatgg |
850 |
Q |
| |
|
||| |||||| ||| | ||||| |||||||| || ||||| || | ||| ||||||||||||||||| ||||||||||| ||| | ||||||| |
|
|
| T |
9679 |
atgcggagatcatctattatttcttggaggtcctgttattcatggtgcaataatgatggaaatcaatgcttggatcccaaatgaaggagagccacaatgg |
9580 |
T |
|
| Q |
851 |
aatcaacttgcgagaaagaaaatagggagctttgtgtatagttgcattgtgatgggatgttgatg |
915 |
Q |
| |
|
|||| ||||| |||| || |||| | |||||| ||| ||| | |||||||||||||||||| |
|
|
| T |
9579 |
aatcggcttgcaggaaatcaatcagggggttttgtgcataattgtactgtgatgggatgttgatg |
9515 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0105; HSP #3
Raw Score: 295; E-Value: 1e-165
Query Start/End: Original strand, 53 - 915
Target Start/End: Original strand, 48397 - 49259
Alignment:
| Q |
53 |
cttaaatgggaggcatttgatccaaatcgtggtcgatttattcaattgcctaaaattccttgtgataaagtttttatgttgtgtgataaggagtcgctgg |
152 |
Q |
| |
|
|||||||||||||| ||||||||||||||| ||||| || || ||||| ||||| |||||||| | |||| | || |||| ||| ||| ||| |
|
|
| T |
48397 |
cttaaatgggaggcttttgatccaaatcgtaatcgatggatacatttgccaaaaatgacttgtgatgcatgtttttcgctggcagatagggaatcgttgg |
48496 |
T |
|
| Q |
153 |
ctgtcggtactgagcttctagtttttggaagggaattgatgggtcctaccattcataagtatgactatctatcaaatacgtggtcaattggaaaaatgtt |
252 |
Q |
| |
|
|||| ||||||||||||||||| ||||||| |||| | |||| ||||| ||||||||||||| | ||| |||||| ||||||| ||||||| ||| | |
|
|
| T |
48497 |
ctgttggtactgagcttctagtctttggaaaggaactaatggatcctatcattcataagtatagccttctgacaaatatgtggtcagttggaaatatgat |
48596 |
T |
|
| Q |
253 |
gaatactccaagatgctcgttcggttcatccagccttggagaaattgcaatattagcaggtgggtgtgatccatgtggcaacatcttgagctcagctgag |
352 |
Q |
| |
|
||||||||| ||||||| ||| ||||| | || |||||||||||||||||| |||| ||||| |||||||||||||||||||| |||||||| |||||| |
|
|
| T |
48597 |
gaatactccgagatgcttgtttggttcggctagtcttggagaaattgcaatactagccggtggttgtgatccatgtggcaacatattgagctcggctgag |
48696 |
T |
|
| Q |
353 |
ctttacaactcagacactggaaaatgagaaacccttccagacatgaataaagcaagaaaaatgtgttcgggtgtatttatggatggaaaattttatgtcc |
452 |
Q |
| |
|
|| || ||| ||||||||||||| || | ||||||||| |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| |
|
|
| T |
48697 |
ctctataacgcagacactggaaattggaagacccttccaaacatgaataaagcaagaaaaatgtgttcaagtgtattcatggatggaaaattttatgtcc |
48796 |
T |
|
| Q |
453 |
ttggtggaattggagctgataaaacaacaccacttacatgtggtgaggaatttgatataaagagaaaagaatggcgtgaaatacccaacatgttcccagt |
552 |
Q |
| |
|
||||||| || | |||||| |||| ||||| ||||||||||| ||||| |||||||| |||| |||| |||||||||||||||| ||||||||||| || |
|
|
| T |
48797 |
ttggtgggatagcagctgaaaaaaaaacacagcttacatgtggggaggagtttgatatgaagacaaaaaaatggcgtgaaatacctaacatgttccccgt |
48896 |
T |
|
| Q |
553 |
gccaactggagtattggaggcaccaccatcttatggaccacctcctttgattgcagttgtaaaaaatgtattgtataatgctgattacg--caacaaagg |
650 |
Q |
| |
|
| ||||||||| || ||| ||||||| |||| ||| |||||||||||||||||||||||||||||||||||||| ||| ||||| | ||||||| |
|
|
| T |
48897 |
acgaactggagtgtttgagacaccaccttcttttgggtcacctcctttgattgcagttgtaaaaaatgtattgtatgctgcagattatggacaacaaa-- |
48994 |
T |
|
| Q |
651 |
aagtaaaaaagtataataaaaacaataactcttgggttaccattggaagatttcctgagcaagccacttcaatgaaaggttggggattagcctttcgtgc |
750 |
Q |
| |
|
||||||| |||||| ||||| |||| ||||||||||| | ||||||||| ||||| |||||||| ||||| ||||| |||||||||||||||||||| || |
|
|
| T |
48995 |
aagtaaagaagtatgataaagacaacaactcttgggtcatcattggaagctttcccgagcaagctacttcgatgaatggttggggattagcctttcgagc |
49094 |
T |
|
| Q |
751 |
atgtggagatatgctaatttttctgggaggtcccattcttcattgtagaggcatgttggaaatcaatgcttgggtcccaaatgaaagagcgatacaatgg |
850 |
Q |
| |
|
||| |||||| ||| | ||||| |||||||| || ||||| || || ||| ||||||||||||||||| ||||||||||| ||| | ||||||| |
|
|
| T |
49095 |
atgcggagatcatctattatttcttggaggtcctgttattcatggtggaataatgatggaaatcaatgcttggatcccaaatgaaggagagccacaatgg |
49194 |
T |
|
| Q |
851 |
aatcaacttgcgagaaagaaaatagggagctttgtgtatagttgcattgtgatgggatgttgatg |
915 |
Q |
| |
|
|||| ||||| |||| || |||| | |||||| ||| ||| | |||||||||||||||||| |
|
|
| T |
49195 |
aatcggcttgcaggaaatcaatcagggggttttgtgcataattgtactgtgatgggatgttgatg |
49259 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0105; HSP #4
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 152 - 915
Target Start/End: Complemental strand, 4196 - 3433
Alignment:
| Q |
152 |
gctgtcggtactgagcttctagtttttggaagggaattgatgggtcctaccattcataagtatgactatctatcaaatacgtggtcaattggaaaaatgt |
251 |
Q |
| |
|
||||| ||||||||||||||||| ||||||| |||||| |||| ||||| ||||||||||||| | ||| |||||| ||||||| ||||||| ||| |
|
|
| T |
4196 |
gctgttggtactgagcttctagtctttggaaaggaattaatggatcctatcattcataagtatagccttctgacaaatatgtggtcagttggaaatatga |
4097 |
T |
|
| Q |
252 |
tgaatactccaagatgctcgttcggttcatccagccttggagaaattgcaatattagcaggtgggtgtgatccatgtggcaacatcttgagctcagctga |
351 |
Q |
| |
|
|||||||||| ||||||| ||| ||||| | || |||||||||||||||||| |||| ||||| |||||||||||||||||||| |||||| | ||||| |
|
|
| T |
4096 |
tgaatactccgagatgcttgtttggttcggctagtcttggagaaattgcaatactagccggtggttgtgatccatgtggcaacatattgagcgctgctga |
3997 |
T |
|
| Q |
352 |
gctttacaactcagacactggaaaatgagaaacccttccagacatgaataaagcaagaaaaatgtgttcgggtgtatttatggatggaaaattttatgtc |
451 |
Q |
| |
|
||| || ||| ||||||||||||| || | ||||||||| |||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| |
|
|
| T |
3996 |
gctctataacgcagacactggaaattggaagacccttccaaacatgaataaagcaagaaaaatgtgttcaagtgtattcatggatggaaaattttatgtc |
3897 |
T |
|
| Q |
452 |
cttggtggaattggagctgataaaacaacaccacttacatgtggtgaggaatttgatataaagagaaaagaatggcgtgaaatacccaacatgttcccag |
551 |
Q |
| |
|
|||||||| || | |||||| |||| ||||| ||||||||||| ||||| |||||||| |||| |||| |||||||||||||||| ||||||||||| | |
|
|
| T |
3896 |
cttggtgggatagcagctgacaaaaaaacacagcttacatgtggggaggagtttgatatgaagacaaaaaaatggcgtgaaatacctaacatgttccccg |
3797 |
T |
|
| Q |
552 |
tgccaactggagtattggaggcaccaccatcttatggaccacctcctttgattgcagttgtaaaaaatgtattgtataatgctgattacg--caacaaag |
649 |
Q |
| |
|
| | ||||||||| || ||| ||||||| |||| ||| |||||||||||||||||||||||||||||||||||||| ||| ||||| | ||||||| |
|
|
| T |
3796 |
tacgaactggagtgtttgagacaccaccttcttttgggtcacctcctttgattgcagttgtaaaaaatgtattgtatgctgcagattatggacaacaaa- |
3698 |
T |
|
| Q |
650 |
gaagtaaaaaagtataataaaaacaataactcttgggttaccattggaagatttcctgagcaagccacttcaatgaaaggttggggattagcctttcgtg |
749 |
Q |
| |
|
||||||| |||||| ||||| |||| ||||||||||| | ||||||||| ||||| |||||||| ||||| ||||| |||||||||||||||||||| | |
|
|
| T |
3697 |
-aagtaaagaagtatgataaagacaacaactcttgggtcatcattggaagctttcccgagcaagctacttcgatgaatggttggggattagcctttcgag |
3599 |
T |
|
| Q |
750 |
catgtggagatatgctaatttttctgggaggtcccattcttcattgtagaggcatgttggaaatcaatgcttgggtcccaaatgaaagagcgatacaatg |
849 |
Q |
| |
|
|||| |||||| ||| | ||||| |||||||| || ||||| || || ||| ||||||||||||||||| ||||||||||| ||| | |||||| |
|
|
| T |
3598 |
catgcggagatcatctattatttcttggaggtcctgttattcatggtggaataatgatggaaatcaatgcttggatcccaaatgaaggagagccacaatg |
3499 |
T |
|
| Q |
850 |
gaatcaacttgcgagaaagaaaatagggagctttgtgtatagttgcattgtgatgggatgttgatg |
915 |
Q |
| |
|
||||| ||||| |||| || |||| | |||||| ||| ||| | |||||||||||||||||| |
|
|
| T |
3498 |
gaatcggcttgcaggaaatcaatcagggggttttgtgcataattgtactgtgatgggatgttgatg |
3433 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0105; HSP #5
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 596 - 915
Target Start/End: Complemental strand, 15899 - 15580
Alignment:
| Q |
596 |
cctttgattgcagttgtaaaaaatgtattgtataatgctgattacg--caacaaaggaagtaaaaaagtataataaaaacaataactcttgggttaccat |
693 |
Q |
| |
|
||||||||||| |||||||||||||||||| || ||| ||||| | ||||||| ||||||| |||||| ||||| |||| ||||||||||| | ||| |
|
|
| T |
15899 |
cctttgattgcggttgtaaaaaatgtattggatgctgcagattatggacaacaaa--aagtaaagaagtatgataaagacaacaactcttgggtcatcat |
15802 |
T |
|
| Q |
694 |
tggaagatttcctgagcaagccacttcaatgaaaggttggggattagcctttcgtgcatgtggagatatgctaatttttctgggaggtcccattcttcat |
793 |
Q |
| |
|
|||||| ||||| |||||||| ||||| ||||| |||||||||||||||||||| ||||| |||||| ||| | ||||| |||||||| || ||||| |
|
|
| T |
15801 |
tggaagctttcccgagcaagctacttcgatgaatggttggggattagcctttcgagcatgcggagatcatctattatttcttggaggtcctgttattcat |
15702 |
T |
|
| Q |
794 |
tgtagaggcatgttggaaatcaatgcttgggtcccaaatgaaagagcgatacaatggaatcaacttgcgagaaagaaaatagggagctttgtgtatagtt |
893 |
Q |
| |
|
|| || ||| ||||||||||||||||| ||||||||||| ||| | ||||||||||| ||||| |||| || |||| | |||||| ||| || |
|
|
| T |
15701 |
ggtggaataatgatggaaatcaatgcttggatcccaaatgaaggagagccacaatggaatcggcttgcaggaaatcaatcagggggttttgtgcataatt |
15602 |
T |
|
| Q |
894 |
gcattgtgatgggatgttgatg |
915 |
Q |
| |
|
| | |||||||||||||||||| |
|
|
| T |
15601 |
gtactgtgatgggatgttgatg |
15580 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1330 (Bit Score: 293; Significance: 1e-164; HSPs: 1)
Name: scaffold1330
Description:
Target: scaffold1330; HSP #1
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 22 - 854
Target Start/End: Original strand, 1165 - 1997
Alignment:
| Q |
22 |
agaacatcgggtttacttctcttgtgatctacttaaatgggaggcatttgatccaaatcgtggtcgatttattcaattgcctaaaattccttgtgataaa |
121 |
Q |
| |
|
||||||| |||| |||||||||| ||| |||||||||||||| ||||||||||||||| ||||| || || ||||| ||||| |||||||| | |
|
|
| T |
1165 |
agaacattgggtgtacttctcttctgaagcccttaaatgggaggcttttgatccaaatcgtaatcgatggatacatttgccaaaaatgacttgtgatgca |
1264 |
T |
|
| Q |
122 |
gtttttatgttgtgtgataaggagtcgctggctgtcggtactgagcttctagtttttggaagggaattgatgggtcctaccattcataagtatgactatc |
221 |
Q |
| |
|
|||| | || |||| ||| ||| ||||||| ||||||||||||||||| ||||||| |||||| |||| ||||| ||||||||||||| | || |
|
|
| T |
1265 |
tgtttttcgctggcagatagggaatcgttggctgttggtactgagcttctagtctttggaaaggaattaatggatcctatcattcataagtatagccttc |
1364 |
T |
|
| Q |
222 |
tatcaaatacgtggtcaattggaaaaatgttgaatactccaagatgctcgttcggttcatccagccttggagaaattgcaatattagcaggtgggtgtga |
321 |
Q |
| |
|
| |||||| ||||||| ||||||| ||| |||||||||| ||||||| ||| ||||| | || |||||||||||||||||| |||| ||||| ||||| |
|
|
| T |
1365 |
tgacaaatatgtggtcagttggaaatatgatgaatactccgagatgcttgtttggttcggctagtcttggagaaattgcaatactagccggtggttgtga |
1464 |
T |
|
| Q |
322 |
tccatgtggcaacatcttgagctcagctgagctttacaactcagacactggaaaatgagaaacccttccagacatgaataaagcaagaaaaatgtgttcg |
421 |
Q |
| |
|
||||||||||||||| |||||||| |||||||| || ||| ||||||||||||| || | ||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
1465 |
tccatgtggcaacatattgagctctgctgagctctataacgcagacactggaaattggaagacccttccaaacatgaataaagcaagaaaaatgtgttca |
1564 |
T |
|
| Q |
422 |
ggtgtatttatggatggaaaattttatgtccttggtggaattggagctgataaaacaacaccacttacatgtggtgaggaatttgatataaagagaaaag |
521 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||| || | |||||| |||| ||||| ||||||||||| ||||| |||||||| |||| |||| |
|
|
| T |
1565 |
agtgtattcatggatggaaaattttatgtccttggtgggatagcagctgacaaaaaaacacagcttacatgtggggaggagtttgatatgaagacaaaaa |
1664 |
T |
|
| Q |
522 |
aatggcgtgaaatacccaacatgttcccagtgccaactggagtattggaggcaccaccatcttatggaccacctcctttgattgcagttgtaaaaaatgt |
621 |
Q |
| |
|
|||||||||||||||| ||||||||||| || | ||||||||| || ||| ||||||| |||| ||| ||||||||||||||||||||||||||||||| |
|
|
| T |
1665 |
aatggcgtgaaatacctaacatgttccccgtacgaactggagtgtttgagacaccaccttcttttgggtcacctcctttgattgcagttgtaaaaaatgt |
1764 |
T |
|
| Q |
622 |
attgtataatgctgattacg--caacaaaggaagtaaaaaagtataataaaaacaataactcttgggttaccattggaagatttcctgagcaagccactt |
719 |
Q |
| |
|
||||||| ||| ||||| | ||||||| ||||||| |||||| ||||| |||| ||||||||||| | ||||||||| ||||| |||||||| |||| |
|
|
| T |
1765 |
attgtatgctgcagattatggacaacaaa--aagtaaagaagtatgataaagacaacaactcttgggtcatcattggaagctttcccgagcaagctactt |
1862 |
T |
|
| Q |
720 |
caatgaaaggttggggattagcctttcgtgcatgtggagatatgctaatttttctgggaggtcccattcttcattgtagaggcatgttggaaatcaatgc |
819 |
Q |
| |
|
| ||||| |||||||||||||||||||| ||||| |||||| ||| | ||||| |||||||| || ||||| || | ||| ||||||||||||| |
|
|
| T |
1863 |
cgatgaatggttggggattagcctttcgagcatgcggagatcatctattatttcttggaggtcctgttattcatggtgcaataatgatggaaatcaatgc |
1962 |
T |
|
| Q |
820 |
ttgggtcccaaatgaaagagcgatacaatggaatc |
854 |
Q |
| |
|
|||| ||||||||||| ||| | ||||||||||| |
|
|
| T |
1963 |
ttggatcccaaatgaaggagagccacaatggaatc |
1997 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0496 (Bit Score: 293; Significance: 1e-164; HSPs: 1)
Name: scaffold0496
Description:
Target: scaffold0496; HSP #1
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 22 - 782
Target Start/End: Original strand, 2363 - 3123
Alignment:
| Q |
22 |
agaacatcgggtttacttctcttgtgatctacttaaatgggaggcatttgatccaaatcgtggtcgatttattcaattgcctaaaattccttgtgataaa |
121 |
Q |
| |
|
||||||| ||||||||||||||| ||| ||| | |||||||| ||||||||||||||| ||||| || || ||||||| ||| |||||||| || |
|
|
| T |
2363 |
agaacattgggtttacttctcttctgaagcccttgagtgggaggcttttgatccaaatcgtaatcgatggatgcatttgcctataatgacttgtgatcaa |
2462 |
T |
|
| Q |
122 |
gtttttatgttgtgtgataaggagtcgctggctgtcggtactgagcttctagtttttggaagggaattgatgggtcctaccattcataagtatgactatc |
221 |
Q |
| |
|
||||| ||||| |||| ||| || ||||||| ||||||||||||||||| ||||||| |||||| |||| ||||| ||||||||||||| ||| || |
|
|
| T |
2463 |
tgttttacgttgtcagatagggaatcattggctgttggtactgagcttctagtctttggaaaggaattaatggctcctatcattcataagtataactttc |
2562 |
T |
|
| Q |
222 |
tatcaaatacgtggtcaattggaaaaatgttgaatactccaagatgctcgttcggttcatccagccttggagaaattgcaatattagcaggtgggtgtga |
321 |
Q |
| |
|
| |||||| ||||||| ||||||||||| |||||||||||||||||| ||| ||||| | || |||||||||||||||||| |||| ||||| ||||| |
|
|
| T |
2563 |
tgacaaatatgtggtcagttggaaaaatgatgaatactccaagatgcttgtttggttcggctagtcttggagaaattgcaatactagctggtggttgtga |
2662 |
T |
|
| Q |
322 |
tccatgtggcaacatcttgagctcagctgagctttacaactcagacactggaaaatgagaaacccttccagacatgaataaagcaagaaaaatgtgttcg |
421 |
Q |
| |
|
|||| |||||| ||| |||||||| |||||||| || ||| |||| |||||||| || || ||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
2663 |
tccacgtggcagcatattgagctctgctgagctctataacgcagatactggaaattgggagacccttccaaacatgaataaagcaagaaaaatgtgttca |
2762 |
T |
|
| Q |
422 |
ggtgtatttatggatggaaaattttatgtccttggtggaattggagctgataaaacaacaccacttacatgtggtgaggaatttgatataaagagaaaag |
521 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||| || | |||||| |||| ||||| |||||||||||||||||| ||||||||||||| ||| |
|
|
| T |
2763 |
agtgtatttatggatggaaaattttacgtccttggtgggatagcagctgacaaaaaaacacaacttacatgtggtgaggagtttgatataaagaataaaa |
2862 |
T |
|
| Q |
522 |
aatggcgtgaaatacccaacatgttcccagtgccaactggagtattggaggcaccaccatcttatggaccacctcctttgattgcagttgtaaaaaatgt |
621 |
Q |
| |
|
||||||||||||||||||||||| ||||||| | ||||||||| | ||| ||||||| |||| ||| ||||||| ||||||||||||||||||||||| |
|
|
| T |
2863 |
aatggcgtgaaatacccaacatgctcccagtacgaactggagtgtctgagacaccaccttcttttgggtcacctcccttgattgcagttgtaaaaaatgt |
2962 |
T |
|
| Q |
622 |
attgtataatgctgattacgcaacaaaggaagtaaaaaagtataataaaaacaataactcttgggttaccattggaagatttcctgagcaagccacttca |
721 |
Q |
| |
|
||||||| ||| ||||| | || | | |||||||| |||||| ||||| |||| |||| |||||| | ||||||||| |||||||||||||| || || |
|
|
| T |
2963 |
attgtatgctgcagattatggaaaacaagaagtaaagaagtatgataaagacaacaactattgggtcatcattggaagctttcctgagcaagctacatcg |
3062 |
T |
|
| Q |
722 |
atgaaaggttggggattagcctttcgtgcatgtggagatatgctaatttttctgggaggtc |
782 |
Q |
| |
|
|||| ||||||||| |||| ||||| |||||||||||| ||| | ||||| ||||||| |
|
|
| T |
3063 |
gtgaatggttggggactagcatttcgatcatgtggagataaactattatttcttggaggtc |
3123 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 394 - 450
Target Start/End: Original strand, 17356619 - 17356675
Alignment:
| Q |
394 |
catgaataaagcaagaaaaatgtgttcgggtgtatttatggatggaaaattttatgt |
450 |
Q |
| |
|
|||||||||| | || || |||||||| |||||||| |||||||||||||||||||| |
|
|
| T |
17356619 |
catgaataaaccgaggaagatgtgttctggtgtattcatggatggaaaattttatgt |
17356675 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University