View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6510_high_42 (Length: 230)
Name: NF6510_high_42
Description: NF6510
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6510_high_42 |
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Alignment Details
Target: chr2 (Bit Score: 174; Significance: 9e-94; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 1 - 195
Target Start/End: Original strand, 5170157 - 5170351
Alignment:
| Q |
1 |
gaataatatgtcaactctctaggtccttggcnnnnnnnagcaaagttccttcctcaagcttttttgcagctatatattaatgtatatacatttgataatg |
100 |
Q |
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| T |
5170157 |
gaataatatgtcaactctctaggtccttggctttttttagcaaagttccttcctcaagcttttttgcagctatatattaatgtatatacatttgataatg |
5170256 |
T |
|
| Q |
101 |
aggaccgttctttttcaagatcaaagcatttaaacttgctcttcttttatgatagggggcatgcaatttggactctcgtgatagaaaagattaat |
195 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5170257 |
aggaccgttctttttcaagatcaaagcatttaaacttgctcttcttttatgatagggggcatgcaatttggactctcgtgatagaaaagattaat |
5170351 |
T |
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