View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6510_low_23 (Length: 310)
Name: NF6510_low_23
Description: NF6510
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6510_low_23 |
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Alignment Details
Target: chr7 (Bit Score: 257; Significance: 1e-143; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 31 - 291
Target Start/End: Original strand, 46108813 - 46109073
Alignment:
| Q |
31 |
atactataattagtgcataagttgagactctggtcaattatgctggtattgacgctcttgggttattttcatcaataatttggggtcatgcttagagatg |
130 |
Q |
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| T |
46108813 |
atactataattagtgcataagttgagactctggtcaattatgctggtattgacgctcttgggttattttcatcaataatttggggtcatgcttagagatg |
46108912 |
T |
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| Q |
131 |
aaataagagtcagagtatcttccttttgttctcaggtaactcaagatctgataggatcccgcaatttgtgaactacatagctgatctggagagcaggtac |
230 |
Q |
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|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46108913 |
aaataagagtcagagtattttccttttgttctcaggtaactcaagatctgataggatcccgcaatttgtgaactacatagctgatctggagagcaggtac |
46109012 |
T |
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| Q |
231 |
ttagtactttgatacatttctttctttataactattttatggtgattttaagtttaaccct |
291 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46109013 |
ttagtactttgatacatttctttctttataactattttatggtgattttaagtttaaccct |
46109073 |
T |
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