View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6510_low_27 (Length: 295)
Name: NF6510_low_27
Description: NF6510
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6510_low_27 |
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Alignment Details
Target: chr7 (Bit Score: 264; Significance: 1e-147; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 14 - 281
Target Start/End: Original strand, 44493545 - 44493812
Alignment:
| Q |
14 |
catcattgctggctctcatgccaattctctccacaattttagttctactattttcagttaccaatttctcaaaattagcaacagcagcaacactccaaac |
113 |
Q |
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| T |
44493545 |
catcattgctggctctcatgccaattctctccacaattttagttctactattttcagttaccaatttctcaaaattagcaacagcagcaacactccaaac |
44493644 |
T |
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| Q |
114 |
aaaccacattcaagtagcccaatcagcatgcgaaggaacactctatcaagacctttgtgtctcaaccttatccactctcccagatcttacctcaaaaaca |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44493645 |
aaaccacattcaagtagcccaatcagcatgcgaaggaacactctatcaagacctttgtgtctcaaccttatccactctcccagatcttacctcaaaaaca |
44493744 |
T |
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| Q |
214 |
gtccctcaaattatttgctctgtcctcaacaacaccataaaagaggttaagcaatcatcttccaattg |
281 |
Q |
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||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44493745 |
gtcccgcaaattatttgctctgtcctcaacaacaccataaaagaggttaagcaatcatcttccaattg |
44493812 |
T |
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