View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF6510_low_32 (Length: 272)
Name: NF6510_low_32
Description: NF6510
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6510_low_32 |
 | |
|
| [»] scaffold0172 (1 HSPs) |
| | |
|
| [»] scaffold0050 (1 HSPs) |
| | |
|
| [»] scaffold0343 (1 HSPs) |
| | |
|
Alignment Details
Target: chr1 (Bit Score: 201; Significance: 1e-110; HSPs: 13)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 18 - 242
Target Start/End: Complemental strand, 46814444 - 46814220
Alignment:
| Q |
18 |
gatcggaggtcgagaggttgcagaagctgcaagttcattcggttaggagcttttcgaatgtggctcagcgtgggtgttgaagtatgggggttttatttcg |
117 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |
|
|
| T |
46814444 |
gatcggatgtcgagaggttgcagaagctgcaagttcattcgattaggagcttttcgaatgtggctcggcgtgggtgttgaagtatgggagttttatttcg |
46814345 |
T |
|
| Q |
118 |
aggggtgttatttggaggtgagtagtgacgatagatggttgtggatactgtgtttacagggtttgtttctgttaaggtgtctgtcttaggtggtgatgtg |
217 |
Q |
| |
|
|||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
46814344 |
aggggtgttatttggaggtgagtagtgacgatggacggttgtggatactgtgtttacagggtttgtttctgttaaggtgtctgtcttaggtggtgatgtg |
46814245 |
T |
|
| Q |
218 |
ttttggtaggtttatcttcaggggc |
242 |
Q |
| |
|
||||||||||||||||||||||||| |
|
|
| T |
46814244 |
ttttggtaggtttatcttcaggggc |
46814220 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 18 - 223
Target Start/End: Complemental strand, 27031817 - 27031613
Alignment:
| Q |
18 |
gatcggaggtcgagaggttgcagaagctgcaagttcattcggttaggagcttttcgaatgtggctcagcgtgggtgttgaagtatgggggttttatttcg |
117 |
Q |
| |
|
|||||||||| ||||||||| ||||||||| ||||||||||||| |||||||||||||||||||||| ||| ||||||||| |||| ||||||||| | |
|
|
| T |
27031817 |
gatcggaggttgagaggttgtggaagctgcatgttcattcggttaagagcttttcgaatgtggctcagtttggatgttgaagtctgggagttttattttg |
27031718 |
T |
|
| Q |
118 |
aggggtgttatttggaggtgagtagtgacgatagatggttgtggatactgtgtttacagggtttgtttctgttaaggtgtctgtcttaggtggtgatgtg |
217 |
Q |
| |
|
||||||||| | ||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
27031717 |
aggggtgttctctgg-ggtgagtagtgacgataggccgttatggatactgtgtttacagggtttgtttctgttaaggtgtccgtcttaggtggtgatgtg |
27031619 |
T |
|
| Q |
218 |
ttttgg |
223 |
Q |
| |
|
|||||| |
|
|
| T |
27031618 |
ttttgg |
27031613 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 18 - 242
Target Start/End: Original strand, 24659033 - 24659256
Alignment:
| Q |
18 |
gatcggaggtcgagaggttgcagaagctgcaagttcattcggttaggagcttttcgaatgtggctcagcgtgggtgttgaagtatgggggttttatttcg |
117 |
Q |
| |
|
|||||||||||||||||||| ||||| || |||||||||||||| |||||||||||||||||||||| |||| ||| |||| |||| ||||||||| | |
|
|
| T |
24659033 |
gatcggaggtcgagaggttgtggaagcatcatgttcattcggttagaagcttttcgaatgtggctcagcctgggagtt-aagtctgggagttttattttg |
24659131 |
T |
|
| Q |
118 |
aggggtgttatttggaggtgagtagtgacgatagatggttgtggatactgtgtttacagggtttgtttctgttaaggtgtctgtcttaggtggtgatgtg |
217 |
Q |
| |
|
||||||||||||||| |||||||||||||||| | ||||| ||| ||||||||||||| |||||||||| |||||||||| ||||||||||| ||||| |
|
|
| T |
24659132 |
aggggtgttatttgggggtgagtagtgacgatgggtggttatggttactgtgtttacaatgtttgtttcttttaaggtgtccatcttaggtggttatgtg |
24659231 |
T |
|
| Q |
218 |
ttttggtaggtttatcttcaggggc |
242 |
Q |
| |
|
||||||| ||||||||||||||||| |
|
|
| T |
24659232 |
ttttggtgggtttatcttcaggggc |
24659256 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 18 - 238
Target Start/End: Original strand, 7857757 - 7857975
Alignment:
| Q |
18 |
gatcggaggtcgagaggttgcagaagctgcaagttcattcggttaggagcttttcgaatgtggctcagcgtgggtgttgaagtatgggggttttatttcg |
117 |
Q |
| |
|
|||||| ||||||||||||| |||||||| || ||||||||||||||||||| |||||||||||| ||||||||||||| |||| ||||||||| | |
|
|
| T |
7857757 |
gatcggtggtcgagaggttgtggaagctgcttgtccattcggttaggagcttttgaaatgtggctcagtttgggtgttgaagtctgggagttttattttg |
7857856 |
T |
|
| Q |
118 |
aggggtgttatttggaggtgagtagtgacgatagatggttgtggatactgtgtttacag-ggtttgtttctgttaaggtgtctgtcttaggtggtgatgt |
216 |
Q |
| |
|
||||||||| | ||| ||||||||||| |||| | ||||||||| || |||||||||| | |||||||||||||||||||| |||||||||| |||||| |
|
|
| T |
7857857 |
aggggtgttctatgggggtgagtagtggcgatgggtggttgtgg--accgtgtttacagtgttttgtttctgttaaggtgtccgtcttaggtgatgatgt |
7857954 |
T |
|
| Q |
217 |
gttttggtaggtttatcttcag |
238 |
Q |
| |
|
| || ||| || |||||||||| |
|
|
| T |
7857955 |
gattcggt-gggttatcttcag |
7857975 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 55 - 234
Target Start/End: Complemental strand, 24449870 - 24449693
Alignment:
| Q |
55 |
ttcggttaggagcttttcgaa-tgtggctcagcgtgggtgttgaagtatgggggttttatttcgaggggtgttatttggaggtgagtagtgacgatagat |
153 |
Q |
| |
|
|||||||||| ||| |||||| || |||||||| ||||||||| || | || ||||||||| ||||| ||||||||| |||||||||||||||| | |
|
|
| T |
24449870 |
ttcggttaggtgctcttcgaaatgcggctcagcttgggtgttggggtctaggagttttattttgaggg-tgttatttgtgggtgagtagtgacgatgggc |
24449772 |
T |
|
| Q |
154 |
ggttgtggatactgtgtttacagggtttgtttctgttaaggtgtctgtcttaggtggtgatgtgttttggtaggtttatct |
234 |
Q |
| |
|
||| |||||||| |||||||||| | |||||| | || || |||| |||||||||||||||||||||| |||||||| |
|
|
| T |
24449771 |
ggtggtggataccgtgtttacagtgcttgtttttttt--ggagtctactttaggtggtgatgtgttttggtgtgtttatct |
24449693 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 74 - 241
Target Start/End: Complemental strand, 46692739 - 46692576
Alignment:
| Q |
74 |
aatgtggctcagcgtgggtgttgaagtatgggggttttatttcgaggggtgttatttggaggtgagtagtgacgatagatggttgtggatactgtgttta |
173 |
Q |
| |
|
||||||||||||| ||||||||| || ||| ||||||||| ||||| |||| |||| |||||||||||||||| | ||| || |||| ||||||| |
|
|
| T |
46692739 |
aatgtggctcagcttgggtgttggggtctggaagttttatttggaggg-tgttctttgtgggtgagtagtgacgatgggcggtggttgatatcgtgttta |
46692641 |
T |
|
| Q |
174 |
cagggtttgtttctgttaaggtgtctgtcttaggtggtgatgtgttttggtaggtttatcttcagggg |
241 |
Q |
| |
|
||| | |||||| | | || || ||| ||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
46692640 |
cagtgcttgttttttt---ggagtttgttttaggtggtgatgtgttttggagggtttatcttcagggg |
46692576 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 158 - 241
Target Start/End: Complemental strand, 30685761 - 30685680
Alignment:
| Q |
158 |
gtggatactgtgtttacagggtttgtttctgttaaggtgtctgtcttaggtggtgatgtgttttggtaggtttatcttcagggg |
241 |
Q |
| |
|
|||||||| ||||||||| | |||||| |||| || |||||| |||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
30685761 |
gtggataccgtgtttacattgcttgtttttgtt--ggagtctgttttaggtggtgatgtgttttggtgggtttatcttcagggg |
30685680 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 136 - 241
Target Start/End: Complemental strand, 24684350 - 24684248
Alignment:
| Q |
136 |
tgagtagtgacgatagatggttgtggatactgtgtttacagggtttgtttctgttaaggtgtctgtcttaggtggtgatgtgttttggtaggtttatctt |
235 |
Q |
| |
|
|||||||||||||| | ||| ||||||| |||||||||| |||||||| | | || || ||| |||||||||||||||||||||| |||||||||| |
|
|
| T |
24684350 |
tgagtagtgacgatgggcggtggtggatatcgtgtttacagagtttgttttttt---ggagtttgttttaggtggtgatgtgttttggtgggtttatctt |
24684254 |
T |
|
| Q |
236 |
cagggg |
241 |
Q |
| |
|
|||||| |
|
|
| T |
24684253 |
cagggg |
24684248 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 55 - 234
Target Start/End: Complemental strand, 5389361 - 5389186
Alignment:
| Q |
55 |
ttcggttaggagcttttcga-atgtggctcagcgtgggtgttgaagtatgggggttttatttcgaggggtgttatttggaggtgagtagtgacgatagat |
153 |
Q |
| |
|
|||||||| | ||| ||||| |||||||||||| ||||||||| || |||| ||||||||| || ||||||| ||| | ||||||||||||||| | |
|
|
| T |
5389361 |
ttcggttaagtgctcttcgatatgtggctcagcttgggtgttggggtctgggagttttattttga-gggtgtt-cttgtaagtgagtagtgacgatgggc |
5389264 |
T |
|
| Q |
154 |
ggttgtggatactgtgtttacagggtttgtttctgttaaggtgtctgtcttaggtggtgatgtgttttggtaggtttatct |
234 |
Q |
| |
|
||| |||||||| |||||||| | | |||||| || || || ||| |||||||||||||||||||||| ||||||||| |
|
|
| T |
5389263 |
ggtggtggataccgtgtttacggtgcttgttt---tttgggagtttgttttaggtggtgatgtgttttggttggtttatct |
5389186 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 74 - 241
Target Start/End: Original strand, 5459322 - 5459485
Alignment:
| Q |
74 |
aatgtggctcagcgtgggtgttgaagtatgggggttttatttcgaggggtgttatttggaggtgagtagtgacgatagatggttgtggatactgtgttta |
173 |
Q |
| |
|
||||||||||||| ||||||||| || ||| ||||||||| || || |||| |||| |||||||||||||||| | ||| |||||||| ||||||| |
|
|
| T |
5459322 |
aatgtggctcagcttgggtgttggggtctggaagttttattttgatgg-tgttctttgtgggtgagtagtgacgatgggcggtggtggataccgtgttta |
5459420 |
T |
|
| Q |
174 |
cagggtttgtttctgttaaggtgtctgtcttaggtggtgatgtgttttggtaggtttatcttcagggg |
241 |
Q |
| |
|
||| | |||||| || || || ||| ||| || ||||||||||||||| ||||||||||||||| |
|
|
| T |
5459421 |
cagtgattgttt---ttttggagtttgttttaagtagtgatgtgttttggtgagtttatcttcagggg |
5459485 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 237
Target Start/End: Original strand, 41920619 - 41920778
Alignment:
| Q |
75 |
atgtggctcagcgtgggtgttgaagtatgggggttttatttcgaggggtgttatttggaggtgagtagtgacgatagatggttgtggatactgtgtttac |
174 |
Q |
| |
|
|||||||||||| ||||||||| || | || ||||||||| ||||| |||| |||| |||||||||||||||||| ||| ||| |||| |||||||| |
|
|
| T |
41920619 |
atgtggctcagcttgggtgttggggtcttggagttttattttgaggg-tgttttttgtgggtgagtagtgacgataggcggtggtgaataccgtgtttac |
41920717 |
T |
|
| Q |
175 |
agggtttgtttctgttaaggtgtctgtcttaggtggtgatgtgttttggtaggtttatcttca |
237 |
Q |
| |
|
| | |||||| | || | || ||| |||||||||| ||| ||||||| |||||||||||| |
|
|
| T |
41920718 |
attgcttgtttttttt--tgagtttgttttaggtggtggtgtattttggttggtttatcttca |
41920778 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 97
Target Start/End: Original strand, 32882512 - 32882554
Alignment:
| Q |
55 |
ttcggttaggagcttttcgaatgtggctcagcgtgggtgttga |
97 |
Q |
| |
|
|||||| ||||||||||||||||||||||||| | |||||||| |
|
|
| T |
32882512 |
ttcggtcaggagcttttcgaatgtggctcagctttggtgttga |
32882554 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 31290998 - 31290921
Alignment:
| Q |
18 |
gatcggaggtcgagaggttgcagaagctgcaagttcattcggttaggagcttttcgaatgtggctcagcgtgggtgtt |
95 |
Q |
| |
|
|||||||||||||||||| | |||| ||| | || ||||| ||||||||||||| |||||||||||| | |||||| |
|
|
| T |
31290998 |
gatcggaggtcgagaggtggtggaagttgcttgatctttcggataggagcttttcggatgtggctcagctttggtgtt |
31290921 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 131; Significance: 5e-68; HSPs: 13)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 18 - 237
Target Start/End: Original strand, 5254360 - 5254574
Alignment:
| Q |
18 |
gatcggaggtcgagaggttgcagaagctgcaagttcattcggttaggagcttttcgaatgtggctcagcgtgggtgttgaagtatgggggttttatttcg |
117 |
Q |
| |
|
|||||||||||||||||||| ||||||||| |||||||||||| ||||||||||||||||||||||| ||||||||||||| || | ||||| | | |
|
|
| T |
5254360 |
gatcggaggtcgagaggttgtggaagctgcatgttcattcggtttggagcttttcgaatgtggctcagtttgggtgttgaagtctgagagtttttt---g |
5254456 |
T |
|
| Q |
118 |
aggggtgttatttggaggtgagtagtgacgatagatggttgtggatactgtgtttacagggtttgtttctgttaaggtgtctgtcttaggtggtgatgtg |
217 |
Q |
| |
|
||||||||| ||||| ||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
5254457 |
aggggtgttctttgg--gtgagtagtgacgatgggtggttgtggatactgtgtttacagtgtttgtttctgttaaggtgtccgtcttaggtggtgatgtg |
5254554 |
T |
|
| Q |
218 |
ttttggtaggtttatcttca |
237 |
Q |
| |
|
||||||| |||||||||||| |
|
|
| T |
5254555 |
ttttggtgggtttatcttca |
5254574 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 18 - 242
Target Start/End: Complemental strand, 14106499 - 14106276
Alignment:
| Q |
18 |
gatcggaggtcgagaggttgcagaagctgcaagttcattcggttaggagcttttcgaatgtggctcagcgtgggtgttgaagtatgggggttttatttcg |
117 |
Q |
| |
|
|||| ||||||||||||||| |||| || | | ||||||||||| ||||||| ||||||||||||||| ||||||||||||| || | ||||||||| | |
|
|
| T |
14106499 |
gatcagaggtcgagaggttgtggaagttgtatgatcattcggttaagagctttacgaatgtggctcagcttgggtgttgaagtctgagagttttattttg |
14106400 |
T |
|
| Q |
118 |
aggggtgttatttggaggtgagtagtgacgatagatggttgtggatactgtgtttacagggtttgtttctgttaaggtgtctgtcttaggtggtgatgtg |
217 |
Q |
| |
|
||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| |||| |
|
|
| T |
14106399 |
aggggtgttctttgggggtgagtagtgacgatgagtggttgtggatactgtgtttacaatgtttgtttctgttaaggtgtccgtcttaggtggtgttgtg |
14106300 |
T |
|
| Q |
218 |
ttttggtaggtttatcttcaggggc |
242 |
Q |
| |
|
||||||| || |||||||||||||| |
|
|
| T |
14106299 |
ttttggt-gggttatcttcaggggc |
14106276 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 18 - 209
Target Start/End: Original strand, 7874395 - 7874585
Alignment:
| Q |
18 |
gatcggaggtcgagaggttgcagaagctgcaagttcattcggttaggagcttttcgaatgtggctcagcgtgggtgttgaagtatgggggttttatttcg |
117 |
Q |
| |
|
|||||||||||||||||||| ||| || | ||||||| ||||||||||||||||||||||||||||| ||||||||||||| | || ||||||||| | |
|
|
| T |
7874395 |
gatcggaggtcgagaggttgtggaaactacttgttcatttggttaggagcttttcgaatgtggctcagcttgggtgttgaagtcttggagttttattttg |
7874494 |
T |
|
| Q |
118 |
aggggtgttatttggaggtgagtagtgacgatagatggttgtggatactgtgtttacagggtttgtttctgttaaggtgtctgtcttaggtg |
209 |
Q |
| |
|
|||| |||| ||||| |||||||||||||||| | |||||||||||||||||||||||| |||||||||||| |||||||| |||||||||| |
|
|
| T |
7874495 |
agggatgttctttgg-ggtgagtagtgacgatgggtggttgtggatactgtgtttacagtgtttgtttctgtcaaggtgtccgtcttaggtg |
7874585 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 74 - 242
Target Start/End: Original strand, 7460836 - 7461003
Alignment:
| Q |
74 |
aatgtggctcagcgtgggtgttgaagtatgggggttttatttcgaggggtgttatttggaggtgagtagtgacgatagatggttgtggatactgtgttta |
173 |
Q |
| |
|
||||||||||||| ||||||||||||| |||| ||||||||| |||||||||| ||||| | |||||||||||||| |||||||||||| |||||||| |
|
|
| T |
7460836 |
aatgtggctcagcttgggtgttgaagtctgggagttttattttgaggggtgttctttggggttgagtagtgacgatgtgtggttgtggatattgtgttta |
7460935 |
T |
|
| Q |
174 |
cagggtttgtttctgttaaggtgtctgtcttaggtggtgatgtgttttggtaggtttatcttcaggggc |
242 |
Q |
| |
|
||| ||||||||||||||||||||| |||||||| |||| |||| |||||| || |||||||||||||| |
|
|
| T |
7460936 |
cagtgtttgtttctgttaaggtgtccgtcttaggcggtgttgtgatttggt-gggttatcttcaggggc |
7461003 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 26 - 242
Target Start/End: Original strand, 14405310 - 14405525
Alignment:
| Q |
26 |
gtcgagaggttgcagaagctgcaagttcattcggttaggagcttttcgaatgtggctcagcgtgggtgttgaagtatgggggttttatttcgaggggtgt |
125 |
Q |
| |
|
|||||| ||||| ||| ||||| ||||||| |||||||||||| ||| ||||||||| | ||||||||||||| |||| ||||||||| ||||| ||| |
|
|
| T |
14405310 |
gtcgagtggttgtggaaactgcacgttcatttggttaggagcttgtcgcatgtggctcgacttgggtgttgaagtctgggagttttattttgagggatgt |
14405409 |
T |
|
| Q |
126 |
t-atttggaggtgagtagtgacgatagatggttgtggatactgtg-tttacagggtttgtttctgttaaggtgtctgtcttaggtggtgatgtgttttgg |
223 |
Q |
| |
|
| ||||| ||||||||||||| || | || |||||| |||||| |||| || |||| ||| |||||||||||| |||||||||||||||||||||||| |
|
|
| T |
14405410 |
tcttttgggggtgagtagtgacaatgggtgattgtgg--actgtgttttatagtgtttatttttgttaaggtgtccgtcttaggtggtgatgtgttttgg |
14405507 |
T |
|
| Q |
224 |
taggtttatcttcaggggc |
242 |
Q |
| |
|
|||| ||||||| |||||| |
|
|
| T |
14405508 |
tagg-ttatctttaggggc |
14405525 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 237
Target Start/End: Original strand, 387278 - 387497
Alignment:
| Q |
18 |
gatcggaggtcgagaggttgcagaagctgcaagttcattcggttaggagcttttcga-atgtggctcagcgtgggtgttgaagtatgggggttttatttc |
116 |
Q |
| |
|
||||||||||| |||||| ||||||||| |||||||| || ||| ||| ||||| | |||||||||| ||||||||| || |||| ||||||||| |
|
|
| T |
387278 |
gatcggaggtcacgaggttttggaagctgcatgttcattcagtcaggtgctcttcgataggtggctcagcttgggtgttggggtctgggagttttatttt |
387377 |
T |
|
| Q |
117 |
gaggggtgttatttggaggtgagtagtgacgatagatggttgtggatactgtgtttacagggtttgtttctgttaaggtgtctgtcttaggtggtgatgt |
216 |
Q |
| |
|
||||| |||| ||||| ||||| |||||||||| | ||| ||| || |||||||||| | |||||| ||| |||| |||||| |||||||||||||| |
|
|
| T |
387378 |
gaggg-tgttctttgggggtgaatagtgacgatgggcggtggtgaattttgtgtttacaatgcttgtttttgtgaaggagtctgttttaggtggtgatgt |
387476 |
T |
|
| Q |
217 |
gttttggtaggtttatcttca |
237 |
Q |
| |
|
|||||||| |||||||||||| |
|
|
| T |
387477 |
gttttggtgggtttatcttca |
387497 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 42 - 241
Target Start/End: Original strand, 10524228 - 10524423
Alignment:
| Q |
42 |
agctgcaagttcattcggttaggagcttttcga-atgtggctcagcgtgggtgttgaagtatgggggttttatttcgaggggtgttatttggaggtgagt |
140 |
Q |
| |
|
||||||| | || |||||||||| ||| ||||| |||||||||||| ||||||||| || |||| ||||||||| || ||||||| |||| ||||||| |
|
|
| T |
10524228 |
agctgcatgatccttcggttaggtgctcttcgatatgtggctcagcttgggtgttggggtttgggagttttatttgga-gggtgttctttgtgggtgagt |
10524326 |
T |
|
| Q |
141 |
agtgacgatagatggttgtggatactgtgtttacagggtttgtttctgttaaggtgtctgtcttaggtggtgatgtgttttggtaggtttatcttcaggg |
240 |
Q |
| |
|
||||||||| | ||| |||||||| |||||||| | | ||||| || || || ||| |||| ||||| |||||||||| ||||||||||||||| |
|
|
| T |
10524327 |
agtgacgatgggcggtggtggataccgtgtttacggtgcttgtt----ttttggagtttgttttagacggtgacgtgttttggtgggtttatcttcaggg |
10524422 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 55 - 241
Target Start/End: Complemental strand, 39338805 - 39338617
Alignment:
| Q |
55 |
ttcggttaggagcttttcgaat-gtggctcagcgtgggtgttgaagtatgggggttttatttcgaggggtgttatttggaggtgagtagtgacgatagat |
153 |
Q |
| |
|
|||||||||| ||| ||||||| ||| |||||| |||||||||| || |||| ||||||||| ||||| |||| |||| |||||||||||||||| | |
|
|
| T |
39338805 |
ttcggttaggtgctcttcgaattgtgactcagcttgggtgttgaggtctgggagttttattttgaggg-tgttctttgtgggtgagtagtgacgatgggc |
39338707 |
T |
|
| Q |
154 |
ggttgtggatactgtgtttacagggtttg--tttctgttaaggtgtctgtcttaggt-ggtgatgtgttttggtaggtttatcttcagggg |
241 |
Q |
| |
|
| | ||||||||| ||||||||| | ||| ||| | || | |||||| |||||| |||||||||||||||| |||||||||||||||| |
|
|
| T |
39338706 |
gatggtggatact-tgtttacagtgcttgtttttttttttttgagtctgttttaggtgggtgatgtgttttggtgggtttatcttcagggg |
39338617 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 149
Target Start/End: Complemental strand, 16952361 - 16952230
Alignment:
| Q |
18 |
gatcggaggtcgagaggttgcagaagctgcaagttcattcggttaggagcttttcgaatgtggctcagcgtgggtgttgaagtatgggggttttatttcg |
117 |
Q |
| |
|
|||||||||| ||||||| | |||||| | | || ||||| ||||||||||||| |||||| ||| | | |||||||| | |||| |||| |||| | |
|
|
| T |
16952361 |
gatcggaggttgagaggtggtggaagctaaacgatctttcggataggagcttttcggatgtggatcaactttggtgttgaggactgggagtttcatttag |
16952262 |
T |
|
| Q |
118 |
aggggtgttatttggaggtgagtagtgacgat |
149 |
Q |
| |
|
||||||||| ||||| |||||||||||||||| |
|
|
| T |
16952261 |
aggggtgttctttgggggtgagtagtgacgat |
16952230 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 149
Target Start/End: Complemental strand, 17023026 - 17022895
Alignment:
| Q |
18 |
gatcggaggtcgagaggttgcagaagctgcaagttcattcggttaggagcttttcgaatgtggctcagcgtgggtgttgaagtatgggggttttatttcg |
117 |
Q |
| |
|
|||||||||| ||||||| | |||||| | | || ||||| ||||||||||||| |||||| ||| | | |||||||| | |||| |||| |||| | |
|
|
| T |
17023026 |
gatcggaggttgagaggtggtggaagctaaacgatctttcggataggagcttttcggatgtggatcaactttggtgttgaggactgggagtttcatttag |
17022927 |
T |
|
| Q |
118 |
aggggtgttatttggaggtgagtagtgacgat |
149 |
Q |
| |
|
||||||||| ||||| |||||||||||||||| |
|
|
| T |
17022926 |
aggggtgttctttgggggtgagtagtgacgat |
17022895 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 149
Target Start/End: Complemental strand, 17060332 - 17060201
Alignment:
| Q |
18 |
gatcggaggtcgagaggttgcagaagctgcaagttcattcggttaggagcttttcgaatgtggctcagcgtgggtgttgaagtatgggggttttatttcg |
117 |
Q |
| |
|
|||||||||| ||||||| | |||||| | | || ||||| ||||||||||||| |||||| ||| | | |||||||| | |||| |||| |||| | |
|
|
| T |
17060332 |
gatcggaggttgagaggtggtggaagctaaacgatctttcggataggagcttttcggatgtggatcaactttggtgttgaggactgggagtttcatttag |
17060233 |
T |
|
| Q |
118 |
aggggtgttatttggaggtgagtagtgacgat |
149 |
Q |
| |
|
||||||||| ||||| |||||||||||||||| |
|
|
| T |
17060232 |
aggggtgttctttgggggtgagtagtgacgat |
17060201 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 170 - 239
Target Start/End: Complemental strand, 14437092 - 14437024
Alignment:
| Q |
170 |
tttacagggtttgtttctgttaaggtgtctgtcttaggtggtgatgtgttttggtaggtttatcttcagg |
239 |
Q |
| |
|
||||||| |||||||||||||||||||| |||||||||| ||||||| |||||| || ||||||||||| |
|
|
| T |
14437092 |
tttacagtgtttgtttctgttaaggtgttcgtcttaggtgatgatgtgatttggt-gggttatcttcagg |
14437024 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 241
Target Start/End: Complemental strand, 22888693 - 22888648
Alignment:
| Q |
196 |
gtctgtcttaggtggtgatgtgttttggtaggtttatcttcagggg |
241 |
Q |
| |
|
|||||| ||||||||||||| |||||||| |||||||||||||||| |
|
|
| T |
22888693 |
gtctgttttaggtggtgatgcgttttggtgggtttatcttcagggg |
22888648 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 130; Significance: 2e-67; HSPs: 15)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 18 - 242
Target Start/End: Complemental strand, 40023549 - 40023324
Alignment:
| Q |
18 |
gatcggaggtcgagaggttgcagaagctgcaagttcattcggttaggagcttttcgaatgtggctcagcgtgggtgttgaagtatgggggttttatttcg |
117 |
Q |
| |
|
|||| |||| || ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| ||| |||| ||||||||| | |
|
|
| T |
40023549 |
gatcagaggacgggaggttgtggaagctgcatgttcattcggttaggagcttttcgaatgtggctcagctagggtgttgtagtctgggagttttattttg |
40023450 |
T |
|
| Q |
118 |
aggggtgttatttggaggtgagtagtgacgatagatggttgtggatactgtgtttacag-ggtttgtttctgttaaggtgtctgtcttaggtggtgatgt |
216 |
Q |
| |
|
||||| ||| ||| | | |||||||||||||| ||||||||||||||| |||||||||| | |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
40023449 |
aggggcgttcttttgggatgagtagtgacgatggatggttgtggataccgtgtttacagtgttttgtttctgttaaggtgtctgtcttaggtggtgatgt |
40023350 |
T |
|
| Q |
217 |
gttttggtaggtttatcttcaggggc |
242 |
Q |
| |
|
|||||| | ||||||||||||||||| |
|
|
| T |
40023349 |
gttttgatgggtttatcttcaggggc |
40023324 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 18 - 235
Target Start/End: Original strand, 45398900 - 45399118
Alignment:
| Q |
18 |
gatcggaggtcgagaggttgcagaagctgcaagttcattcggttaggagcttttcgaatgtggctcagcgtgggtgttgaagtatgggggttttatttcg |
117 |
Q |
| |
|
|||||||||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||| || | | ||||||||||| |||| ||| ||||| | |
|
|
| T |
45398900 |
gatcggaggtcgagaggttgtggaagctgcatgttcattcggttatgagcttttcgaatgtggcgcaacttaggtgttgaagtttgggagttctattttg |
45398999 |
T |
|
| Q |
118 |
aggggtgttatttggaggtgagtagtgacgatagatggttgtggatactgtgtttacag-ggtttgtttctgttaaggtgtctgtcttaggtggtgatgt |
216 |
Q |
| |
|
|||||||| |||| |||||||||||||||| |||| ||||||||| ||||||||||| | |||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
45399000 |
tggggtgttcgttgggggtgagtagtgacgatggatgattgtggatattgtgtttacagtgttttgtttctgttaaggtgtccgtcttaggtggtgatgt |
45399099 |
T |
|
| Q |
217 |
gttttggtaggtttatctt |
235 |
Q |
| |
|
|||||||| |||||||||| |
|
|
| T |
45399100 |
gttttggtgggtttatctt |
45399118 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 18 - 242
Target Start/End: Complemental strand, 23328327 - 23328103
Alignment:
| Q |
18 |
gatcggaggtcgagaggttgcagaagctgcaagttcattcggttaggagcttttcgaatgtggctcagcgtgggtgttgaagtatgggggttttatttcg |
117 |
Q |
| |
|
|||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| ||||||||| | |
|
|
| T |
23328327 |
gatcggaggtcgagaggttgtggaagctccttgttcattcggttaggagcttttcgaatgtggctcagcttgggtgttgaagtctgggagttttattttg |
23328228 |
T |
|
| Q |
118 |
aggggtgttatttggaggtgagtagtgacgatagatggttgtggatactgtgtttacagggtttgtttctgttaaggtgtctgtcttaggtggtgatgtg |
217 |
Q |
| |
|
|| |||||| ||||| |||||||||||||||| | |||||||||||| |||| |||||| |||||||||||||||| ||| ||||||||||||||| | |
|
|
| T |
23328227 |
agtggtgttctttgggggtgagtagtgacgatgggtggttgtggatattgtgcttacagtgtttgtttctgttaagaggtccgtcttaggtggtgatata |
23328128 |
T |
|
| Q |
218 |
ttttggtaggtttatcttcaggggc |
242 |
Q |
| |
|
|||| || |||||||| ||| |||| |
|
|
| T |
23328127 |
ttttcgtgggtttatcctcaagggc |
23328103 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 74 - 241
Target Start/End: Original strand, 19176665 - 19176831
Alignment:
| Q |
74 |
aatgtggctcagcgtgggtgttgaagtatgggggttttatttcgaggggtgttatttggaggtgagtagtgacgatagatggttgtggatactgtgttta |
173 |
Q |
| |
|
||||||||||||| ||||||| | || |||| ||||||||| ||||| |||| ||| | |||||||||||||||| |||||| |||||||||||||||| |
|
|
| T |
19176665 |
aatgtggctcagcttgggtgtcggggtctgggtgttttattttgaggg-tgttctttaggggtgagtagtgacgatggatggtggtggatactgtgttta |
19176763 |
T |
|
| Q |
174 |
cagggtttgtttctgttaaggtgtctgtcttaggtggtgatgtgttttggtaggtttatcttcagggg |
241 |
Q |
| |
|
| | | |||||| | || || |||||| ||||||||| |||||||||||| ||||| |||||||||| |
|
|
| T |
19176764 |
ctgtgcttgttttttttttggagtctgttttaggtggttatgtgttttggtgggtttgtcttcagggg |
19176831 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 21342639 - 21342784
Alignment:
| Q |
18 |
gatcggaggtcgagaggttgcagaagctgcaagttcattcggttaggagcttttcgaatgtggctcagcgtgggtgttgaagtatgggggttttatttcg |
117 |
Q |
| |
|
|||| ||||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||| | ||||||||||||| || | |||||||| | |
|
|
| T |
21342639 |
gatcagaggtcgagaggttgtggaagctgcttgttcattcggttagaagcttttcgaatgtggctcgacttgggtgttgaagtctgagagttttattcca |
21342738 |
T |
|
| Q |
118 |
aggggtgtt-atttggaggtgagtagtgacgatagatggttgtgga |
162 |
Q |
| |
|
||||||||| ||||| ||||||| |||| |||| |||||||||| |
|
|
| T |
21342739 |
aggggtgttcgtttgggggtgagttgtgatgataagtggttgtgga |
21342784 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 23 - 239
Target Start/End: Original strand, 43012484 - 43012700
Alignment:
| Q |
23 |
gaggtcgagaggttgcagaagctgcaagttcattcggttaggagcttttcgaa-tgtggctcagcgtgggtgttgaagtatgggggttttatttcgaggg |
121 |
Q |
| |
|
||||||| ||||||| |||| |||| | || |||||| ||| ||| |||||| ||||||||||| ||||||||| || | || |||||| || ||||| |
|
|
| T |
43012484 |
gaggtcgcgaggttgtggaagttgcatgatcgttcggtcaggtgctcttcgaaatgtggctcagcttgggtgttggggtctaggagttttaatttgaggg |
43012583 |
T |
|
| Q |
122 |
gtgttatttggaggtgagtagtgacgatagatggttgtggatactgtgtttacagggtttgtttctgttaaggtgtctgtcttaggtggtgatgtgtttt |
221 |
Q |
| |
|
|||| ||||||||||||||||| |||| || || |||||||| ||||||||| | |||||| ||| |||| |||||| |||| ||||||||| |||| |
|
|
| T |
43012584 |
-tgttctttggaggtgagtagtggcgatggacgggggtggataccgtgtttacaatgcttgtttttgtgaaggagtctgttttagatggtgatgtctttt |
43012682 |
T |
|
| Q |
222 |
ggtaggtttatcttcagg |
239 |
Q |
| |
|
||| ||||| |||||||| |
|
|
| T |
43012683 |
ggtgggtttttcttcagg |
43012700 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 42 - 241
Target Start/End: Original strand, 47235826 - 47236023
Alignment:
| Q |
42 |
agctgcaagttcattcggttaggagcttttcgaa-tgtggctcagcgtgggtgttgaagtatgggggttttatttcgaggggtgttatttggaggtgagt |
140 |
Q |
| |
|
||||||| | || |||||||||| ||| |||||| ||||| ||||| ||||||||| || || | ||||||||| ||||| |||| |||| ||||||| |
|
|
| T |
47235826 |
agctgcatgatccttcggttaggtgctcttcgaaatgtggttcagcttgggtgttggggtctgcgagttttattttgaggg-tgttctttgtgggtgagt |
47235924 |
T |
|
| Q |
141 |
agtgacgatagatggttgtggatactgtgtttacagggtttgtttctgttaaggtgtctgtcttaggtggtgatgtgttttggtaggtttatcttcaggg |
240 |
Q |
| |
|
||||||||| || ||| |||||||| |||||||||| | |||||| | || | |||||| |||||||||||||| ||||||| ||||||||| ||||| |
|
|
| T |
47235925 |
agtgacgatggacggtggtggataccgtgtttacagtgcttgttttttttta--agtctgttttaggtggtgatgtattttggtgggtttatctccaggg |
47236022 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 42 - 240
Target Start/End: Original strand, 45163983 - 45164178
Alignment:
| Q |
42 |
agctgcaagttcattcggttaggagcttttcgaa-tgtggctcagcgtgggtgttgaagtatgggggttttatttcgaggggtgttatttggaggtgagt |
140 |
Q |
| |
|
||||||| | || |||||||||| ||| |||||| ||||||| ||| ||||||||| || | || ||||||||| ||||| ||||||||| |||||| | |
|
|
| T |
45163983 |
agctgcatgatccttcggttaggtgctcttcgaaatgtggcttagcttgggtgttggggtctaggagttttattttgaggg-tgttatttgtaggtgatt |
45164081 |
T |
|
| Q |
141 |
agtgacgatagatggttgtggatactgtgtttacagggtttgtttctgttaaggtgtctgtcttaggtggtgatgtgttttggtaggtttatcttcaggg |
240 |
Q |
| |
|
||||||||| | ||| || |||| ||||||||| | |||||||| | || |||| | |||||||||||||||||||||| ||||||||| ||||| |
|
|
| T |
45164082 |
agtgacgatgggcggtgatgaataccgtgtttacaatgcttgtttcttt---ggagtctattttaggtggtgatgtgttttggtgggtttatctccaggg |
45164178 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 179 - 242
Target Start/End: Complemental strand, 50305392 - 50305329
Alignment:
| Q |
179 |
tttgtttctgttaaggtgtctgtcttaggtggtgatgtgttttggtaggtttatcttcaggggc |
242 |
Q |
| |
|
||||||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||| |
|
|
| T |
50305392 |
tttgtttctgttaaggtgttcgtcttaggtggtgtagtgttttggtgggtttatcttcaggggc |
50305329 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 42 - 241
Target Start/End: Complemental strand, 2392459 - 2392259
Alignment:
| Q |
42 |
agctgcaagttcattcggttaggagcttttcgaa-tgtggctcagcgtgggtgttgaagtatgggggttttatttcgaggggtgttatttggaggtgagt |
140 |
Q |
| |
|
||||||| | || ||||||||||| || ||| || ||||||||||| ||||||||| || | || ||||||||| | ||||||||||| ||||||| |
|
|
| T |
2392459 |
agctgcatgatccttcggttaggatctcttcaaaatgtggctcagcttgggtgttggggtctaggagttttattttg-taggtgttatttgtgggtgagt |
2392361 |
T |
|
| Q |
141 |
agtgacgatagatggttgtggatactgtgtttacag-ggtttgtttctgttaaggtgtctgtcttaggtggtgatgtgttttggtaggtttatcttcagg |
239 |
Q |
| |
|
||||||||| | ||| |||||||| |||||||||| | ||| ||| | || |||| | ||||| |||||||||||||||| ||||||| |||||| |
|
|
| T |
2392360 |
agtgacgatgggcggtggtggataccgtgtttacagtgcttttttttttttttttagtctattttaggcggtgatgtgttttggtgggtttattttcagg |
2392261 |
T |
|
| Q |
240 |
gg |
241 |
Q |
| |
|
|| |
|
|
| T |
2392260 |
gg |
2392259 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 241
Target Start/End: Complemental strand, 34475631 - 34475514
Alignment:
| Q |
120 |
gggtgttatttggaggtgagtagtgacgatagatggttgtggatactgtgtttacagggtttgtttctgttaaggtgtctgtcttaggtggtgatgtgtt |
219 |
Q |
| |
|
||||||| |||| |||||||||||||||| | ||| |||||||| ||||||||| | |||||| | || |||||| ||||||||||||||||| |
|
|
| T |
34475631 |
gggtgttctttgtgggtgagtagtgacgatgggcggtggtggataccgtgtttacattgcttgtttttt----ggagtctgttttaggtggtgatgtgtt |
34475536 |
T |
|
| Q |
220 |
ttggtaggtttatcttcagggg |
241 |
Q |
| |
|
||||| |||||||| |||||| |
|
|
| T |
34475535 |
ttggtgagtttatctccagggg |
34475514 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 240
Target Start/End: Original strand, 53248121 - 53248224
Alignment:
| Q |
134 |
ggtgagtagtgacgatagatggttgtggatactgtgtttacagggtttgtttctgttaaggtgtctgtcttaggtggtgatgtgttttggtaggtttatc |
233 |
Q |
| |
|
|||||||||||||||| | ||| |||| ||| |||||||||| | |||||| | | || |||||| ||||||||||||||||||| || || ||||| |
|
|
| T |
53248121 |
ggtgagtagtgacgatgggcggtggtggttaccgtgtttacagtgcttgttttttt---ggagtctgttttaggtggtgatgtgtttttgtggggttatc |
53248217 |
T |
|
| Q |
234 |
ttcaggg |
240 |
Q |
| |
|
||||||| |
|
|
| T |
53248218 |
ttcaggg |
53248224 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 42 - 176
Target Start/End: Complemental strand, 2394223 - 2394089
Alignment:
| Q |
42 |
agctgcaagttcattcggttaggagcttttcgaa-tgtggctcagcgtgggtgttgaagtatgggggttttatttcgaggggtgttatttggaggtgagt |
140 |
Q |
| |
|
||||||| | || ||||||||||| || ||| || ||||||||||| ||||||||| || | || ||||||||| | ||||||||||| ||||||| |
|
|
| T |
2394223 |
agctgcatgatccttcggttaggatctcttcaaaatgtggctcagcttgggtgttggggtctaggagttttattttg-taggtgttatttgtgggtgagt |
2394125 |
T |
|
| Q |
141 |
agtgacgatagatggttgtggatactgtgtttacag |
176 |
Q |
| |
|
||||||||| | ||| |||||||| |||||||||| |
|
|
| T |
2394124 |
agtgacgatgggcggtggtggataccgtgtttacag |
2394089 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 236
Target Start/End: Original strand, 7105029 - 7105163
Alignment:
| Q |
102 |
tgggggttttatttcgaggggtgttatttggaggtgagtagtgacgatagatggttgtggatactgtgtttacagggtttgtttctgttaaggtgtctgt |
201 |
Q |
| |
|
|||| ||||||||| ||||||||| || | |||||||||||||||| | |||| ||||||||||| |||| || | |||||| | ||| |||||| |
|
|
| T |
7105029 |
tgggagttttattttaaggggtgtttctttggggtgagtagtgacgatgggtggtggtggatactgtttttatagtgcttgttttcttgaagaagtctgt |
7105128 |
T |
|
| Q |
202 |
cttaggtggtgatgtgttttggtaggtttatcttc |
236 |
Q |
| |
|
||||||||||| |||||||| ||||| ||||| |
|
|
| T |
7105129 |
tttaggtggtgacatgttttggcgggtttgtcttc |
7105163 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 240
Target Start/End: Complemental strand, 39021093 - 39021050
Alignment:
| Q |
196 |
gtctgtcttaggtggtgatgtgttttggtaggtttatcttcaggg |
240 |
Q |
| |
|
|||||||||||||||||||||| |||||| || |||||||||||| |
|
|
| T |
39021093 |
gtctgtcttaggtggtgatgtgatttggt-gggttatcttcaggg |
39021050 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 119; Significance: 7e-61; HSPs: 8)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 18 - 240
Target Start/End: Original strand, 2825887 - 2826106
Alignment:
| Q |
18 |
gatcggaggtcgagaggttgcagaagctgcaagttcattcggttaggagcttttcgaatgtggctcagcgtgggtgttgaagtatgggggttttatttcg |
117 |
Q |
| |
|
||||||||||| |||||||| ||||||||| |||||||||||||||||||||||||| |||| |||| ||||||||||||| |||| ||||||||| | |
|
|
| T |
2825887 |
gatcggaggtctagaggttgtggaagctgcatgttcattcggttaggagcttttcgaaggtggttcagtttgggtgttgaagtttgggagttttattttg |
2825986 |
T |
|
| Q |
118 |
aggggtgttatttggaggtgagtagtgacgatagatggttgtggatactgtgtttacagggtttgtttctgttaaggtgtctgtcttaggtggtgatgtg |
217 |
Q |
| |
|
||||||||| | ||| |||||||||||||||| | ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||| |
|
|
| T |
2825987 |
aggggtgttctctgg-ggtgagtagtgacgatgggacgttgtggatactgcgtttacagggtttgtttctgttaaggtgtttgtcttaggtgatgatgtg |
2826085 |
T |
|
| Q |
218 |
ttttggtaggtttatcttcaggg |
240 |
Q |
| |
|
|||||| ||| |||||||||||| |
|
|
| T |
2826086 |
ttttgg-agg-ttatcttcaggg |
2826106 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 18 - 222
Target Start/End: Complemental strand, 31050638 - 31050434
Alignment:
| Q |
18 |
gatcggaggtcgagaggttgcagaagctgcaagttcattcggttaggagcttttcgaatgtggctcagcgtgggtgttgaagtatgggggttttatttcg |
117 |
Q |
| |
|
|||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| ||||||| ||| ||||||||||||| ||| ||||||||| | |
|
|
| T |
31050638 |
gatcggaggtcgagaggttgtggaagctgcatgttcattcggttaggagcttttcgattgtggctaagcttgggtgttgaagtctggctgttttattttg |
31050539 |
T |
|
| Q |
118 |
aggggtgttatttggaggtgagtagtgacgatagatggttgtggatactgtgtttacagggtttgtttctgttaaggtgtctgtcttaggtggtgatgtg |
217 |
Q |
| |
|
||||||||| |||| |||||||||||||||| |||| | |||||| ||||||||||| ||||| ||||||| |||||| |||||||||||||||||| |
|
|
| T |
31050538 |
aggggtgttccttgggggtgagtagtgacgatggatgatggtggatgttgtgtttacagtgtttgcttctgttgaggtgttcgtcttaggtggtgatgtg |
31050439 |
T |
|
| Q |
218 |
ttttg |
222 |
Q |
| |
|
||||| |
|
|
| T |
31050438 |
ttttg |
31050434 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 18 - 196
Target Start/End: Complemental strand, 35341315 - 35341139
Alignment:
| Q |
18 |
gatcggaggtcgagaggttgcagaagctgcaagttcattcggttaggagcttttcgaatgtggctcagcgtgggtgttgaagtatgggggttttatttcg |
117 |
Q |
| |
|
|||||||| ||||||||||| ||||||||| |||||||| |||| |||||||||||||||||||||| | ||||||||||| |||| ||||||||| | |
|
|
| T |
35341315 |
gatcggagttcgagaggttgtggaagctgcatgttcattcagttatgagcttttcgaatgtggctcag-tttggtgttgaagtttgggagttttattttg |
35341217 |
T |
|
| Q |
118 |
aggggtgttatttggaggtgagtagtgacgatagatggttgtggatactgtgtttacagggtttgtttctgttaaggtg |
196 |
Q |
| |
|
||||||||| | ||| |||||||||||||||| | |||||| ||||||||||||||||| |||||||| |||||||||| |
|
|
| T |
35341216 |
aggggtgttctctgg-ggtgagtagtgacgatgggtggttgcggatactgtgtttacagtgtttgtttttgttaaggtg |
35341139 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 120 - 241
Target Start/End: Original strand, 20464796 - 20464914
Alignment:
| Q |
120 |
gggtgttatttggaggtgagtagtgacgatagatggttgtggatactgtgtttacagggtttgtttctgttaaggtgtctgtcttaggtggtgatgtgtt |
219 |
Q |
| |
|
||||||||||||| |||||||||||||||| | ||| |||||||| ||||||||||||||||||| | | || || ||| |||||||||||||| | |
|
|
| T |
20464796 |
gggtgttatttgggggtgagtagtgacgatgggcggtggtggataccgtgtttacagggtttgtttttttgaa---gtttgttttaggtggtgatgtatg |
20464892 |
T |
|
| Q |
220 |
ttggtaggtttatcttcagggg |
241 |
Q |
| |
|
||||| |||||||||||||||| |
|
|
| T |
20464893 |
ttggtgggtttatcttcagggg |
20464914 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 74 - 239
Target Start/End: Original strand, 8255188 - 8255350
Alignment:
| Q |
74 |
aatgtggctcagcgtgggtgttgaagtatgggggttttatttcgaggggtgttatttggaggtgagtagtgacgatagatggttgtggatactgtgttta |
173 |
Q |
| |
|
||||||||||||| |||||||| || || | ||||||||| ||||| |||| |||| |||||||||||||||| | || |||||||||||||||| |
|
|
| T |
8255188 |
aatgtggctcagcttgggtgttagggtctgtgagttttattttgaggg-tgttctttgtgggtgagtagtgacgatgggatgtggtggatactgtgttta |
8255286 |
T |
|
| Q |
174 |
cagggtttgtttctgttaaggtgtctgtcttaggtggtgatgtgttttggtaggtttatcttcagg |
239 |
Q |
| |
|
||| | |||||| || || |||||| ||||||||||||||||||| || ||||||||||||| |
|
|
| T |
8255287 |
cagtgcttgttttattt--ggagtctgttttaggtggtgatgtgtttttgtgagtttatcttcagg |
8255350 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 74 - 239
Target Start/End: Original strand, 8268606 - 8268768
Alignment:
| Q |
74 |
aatgtggctcagcgtgggtgttgaagtatgggggttttatttcgaggggtgttatttggaggtgagtagtgacgatagatggttgtggatactgtgttta |
173 |
Q |
| |
|
||||||||||||| |||||||| || || | ||||||||| ||||| |||| |||| |||||||||||||||| | || |||||||||||||||| |
|
|
| T |
8268606 |
aatgtggctcagcttgggtgttagggtctgtgagttttattttgaggg-tgttctttgtgggtgagtagtgacgatgggatgtggtggatactgtgttta |
8268704 |
T |
|
| Q |
174 |
cagggtttgtttctgttaaggtgtctgtcttaggtggtgatgtgttttggtaggtttatcttcagg |
239 |
Q |
| |
|
||| | |||||| || || |||||| ||||||||||||||||||| || ||||||||||||| |
|
|
| T |
8268705 |
cagtgcttgttttattt--ggagtctgttttaggtggtgatgtgtttttgtgagtttatcttcagg |
8268768 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 241
Target Start/End: Complemental strand, 27555725 - 27555687
Alignment:
| Q |
203 |
ttaggtggtgatgtgttttggtaggtttatcttcagggg |
241 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
27555725 |
ttaggtggtgatgtgttttggtgggtttatcttcagggg |
27555687 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 30964717 - 30964760
Alignment:
| Q |
196 |
gtctgtcttaggtggtgatgtgttttggtaggtttatcttcagg |
239 |
Q |
| |
|
|||||| |||||||||||||||||||||| ||||||||| |||| |
|
|
| T |
30964717 |
gtctgttttaggtggtgatgtgttttggtgggtttatctccagg |
30964760 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 107; Significance: 1e-53; HSPs: 13)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 18 - 242
Target Start/End: Complemental strand, 35816220 - 35815999
Alignment:
| Q |
18 |
gatcggaggtcgagaggttgcagaagctgcaagttcattcggttaggagcttttcgaatgtggctcagcgtgggtgttgaagtatgggggttttatttcg |
117 |
Q |
| |
|
|||||||||| ||||| ||| ||||||||| ||||||||||||| ||| |||||||||||||||||| ||| ||||||||| | | ||||| | | |
|
|
| T |
35816220 |
gatcggaggttgagagattgtggaagctgcatgttcattcggttaagagtttttcgaatgtggctcagtttggatgttgaagtcagagagtttttt---g |
35816124 |
T |
|
| Q |
118 |
aggggtgttatttggaggtgagtagtgacgatagatggttgtggatactgtgtttacagggtttgtttctgttaaggtgtctgtcttaggtggtgatgtg |
217 |
Q |
| |
|
||||||||| ||||| |||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| | |
|
|
| T |
35816123 |
aggggtgttctttgggggtgagtagtgatgatgggtggttgtggatactgtgtttacaatgtttgtttctgttaaggtgtctgtcttaagtggtgatggg |
35816024 |
T |
|
| Q |
218 |
ttttggtaggtttatcttcaggggc |
242 |
Q |
| |
|
||||||| |||||||||||| |||| |
|
|
| T |
35816023 |
ttttggtgggtttatcttcatgggc |
35815999 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 18 - 237
Target Start/End: Complemental strand, 38577767 - 38577546
Alignment:
| Q |
18 |
gatcggaggtcgagaggttgcagaagctgcaagttcattcggttaggagcttttcgaatgtggctcagcgtgggtgttgaagtatgggg-gttttatttc |
116 |
Q |
| |
|
|||| ||||||||||| ||| ||||||||| |||||||||||| |||||||||||||| |||| || | ||||||||||||| ||||| ||||||||| |
|
|
| T |
38577767 |
gatcagaggtcgagagtttgtggaagctgcatgttcattcggtttggagcttttcgaatatggcgcaacttgggtgttgaagtctggggagttttatttt |
38577668 |
T |
|
| Q |
117 |
gaggggtgttatttggaggtgagtagtgacgatagatggttgtggatactgtgtttacag-ggtttgtttctgttaaggtgtctgtcttaggtggtgatg |
215 |
Q |
| |
|
| || ||||| ||||| | |||||||||||||| |||| ||||||||||||||||||||| | ||||||| | || ||||||| |||||||||||||||| |
|
|
| T |
38577667 |
gtggagtgttctttggggatgagtagtgacgatggatgattgtggatactgtgtttacagtgttttgtttatatttaggtgtccgtcttaggtggtgatg |
38577568 |
T |
|
| Q |
216 |
tgttttggtaggtttatcttca |
237 |
Q |
| |
|
||||||||| |||||||||||| |
|
|
| T |
38577567 |
tgttttggtgggtttatcttca |
38577546 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 50 - 241
Target Start/End: Complemental strand, 15821324 - 15821132
Alignment:
| Q |
50 |
gttcattcggttaggagcttttcgaatgtggctcagcgtgggtgttgaagtatgggggttttatttcgaggggtgttatttggaggtgagtagtgacgat |
149 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||| || ||||||||| |||| ||||||||| |||| ||||| ||| | |||||||||| |||| |
|
|
| T |
15821324 |
gttcatttggttaggagcttttcgaatgtggctcagctcggatgttgaagtctgggagttttattttgaggagtgttcttttggagtgagtagtggcgat |
15821225 |
T |
|
| Q |
150 |
agatggttgtggatactgtgtttacagggttt-gtttctgttaaggtgtctgtcttaggtggtgatgtgttttggtaggtttatcttcagggg |
241 |
Q |
| |
|
||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| |
|
|
| T |
15821224 |
gagtggttgtggattttgtgtttaccttgttttgtttctgttaaggtgtctgtcttaggtggtgatgtgttttggtggttttatcttcagggg |
15821132 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 55 - 239
Target Start/End: Complemental strand, 31207302 - 31207120
Alignment:
| Q |
55 |
ttcggttaggagcttttcgaa-tgtggctcagcgtgggtgttgaagtatgggggttttatttcgaggggtgttatttggaggtgagtagtgacgatagat |
153 |
Q |
| |
|
|||||||||| ||| |||||| ||||||||||| ||||||||| |||||||| ||||||||| || ||||||| |||| |||||||||||||||| | |
|
|
| T |
31207302 |
ttcggttaggtgctcttcgaaatgtggctcagcttgggtgttggagtatgggagttttattttga-gggtgttctttgtgggtgagtagtgacgatgggc |
31207204 |
T |
|
| Q |
154 |
ggttgtggatactgtgtttacagggtttgtttctgttaaggtgtctgtcttaggtggtgatgtgttttggtaggtttatcttcagg |
239 |
Q |
| |
|
| | ||||||||||||||||||| | || ||| | || | |||||| |||||||||||||||||||||| ||||||||||||| |
|
|
| T |
31207203 |
gatggtggatactgtgtttacagtgcttttttttttt--tgagtctgttttaggtggtgatgtgttttggtgagtttatcttcagg |
31207120 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 234
Target Start/End: Original strand, 20138529 - 20138744
Alignment:
| Q |
18 |
gatcggaggtcgagaggttgcaga-agctgcaagttcattcggttaggagcttttcgaa-tgtggctcagcgtgggtgttgaagtatgggggttttattt |
115 |
Q |
| |
|
|||||||||||| |||||| || ||||||| | || |||||||||| ||| |||||| |||| | | || ||||||||| || |||| ||||||||| |
|
|
| T |
20138529 |
gatcggaggtcgcgaggtttgtgatagctgcatgatccttcggttaggtgctcttcgaaatgtgacccggcttgggtgttggggtctgggagttttattt |
20138628 |
T |
|
| Q |
116 |
cgaggggtgttatttggaggtgagtagtgacgatagatggttgtggatactgtgtttacagggtttgtttctgttaaggtgtctgtcttaggtggtgatg |
215 |
Q |
| |
|
||||||| |||| ||||||||||||||||| || ||| |||||||| |||||||||| | ||| || || || |||||| ||||||||||||| |
|
|
| T |
20138629 |
ttgagggtgttctttgtaggtgagtagtgacgatggacggtggtggataccgtgtttacagtgcttgatt---ttttggagtctgttttaggtggtgatg |
20138725 |
T |
|
| Q |
216 |
tgttttggtaggtttatct |
234 |
Q |
| |
|
||||||||| ||||||||| |
|
|
| T |
20138726 |
tgttttggtgggtttatct |
20138744 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 128 - 241
Target Start/End: Original strand, 36631038 - 36631148
Alignment:
| Q |
128 |
tttggaggtgagtagtgacgatagatggttgtggatactgtgtttacagggtttgtttctgttaaggtgtctgtcttaggtggtgatgtgttttggtagg |
227 |
Q |
| |
|
||||| |||||||||| ||||| | ||| |||||||| |||||||||| |||||||| | | || |||||| |||||||||||||||||||||| || |
|
|
| T |
36631038 |
tttgggggtgagtagttacgatgggcggtggtggataccgtgtttacagtgtttgttttttt---ggagtctgttttaggtggtgatgtgttttggtggg |
36631134 |
T |
|
| Q |
228 |
tttatcttcagggg |
241 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
36631135 |
tttatcttcagggg |
36631148 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 55 - 241
Target Start/End: Complemental strand, 12898215 - 12898032
Alignment:
| Q |
55 |
ttcggttaggagcttttcgaa-tgtggctcagcgtgggtgttgaagtatgggggttttatttcgaggggtgttatttggaggtgagtagtgacgatagat |
153 |
Q |
| |
|
|||||||||| ||| |||||| ||||||||||| ||||||||| || | | ||||||||| ||||| |||| |||| |||||||||||||||| | |
|
|
| T |
12898215 |
ttcggttaggtgctcttcgaaatgtggctcagcttgggtgttggggtcttagagttttattttgaggg-tgttctttgtgggtgagtagtgacgatgaac |
12898117 |
T |
|
| Q |
154 |
ggttgtggatactgtgtttacagggtttgtttctgttaaggtgtctgtcttaggtggtgatgtgttttggtaggtttatcttcagggg |
241 |
Q |
| |
|
|||||||||| | ||||| || || |||||| | | || || ||| |||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
12898116 |
ggttgtggattccatgtttgcatggattgttttttt---ggagtttgttttaggtggtgatgtgttttggtgggtttatcttcagggg |
12898032 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 75 - 237
Target Start/End: Complemental strand, 34388925 - 34388767
Alignment:
| Q |
75 |
atgtggctcagcgtgggtgttgaagtatgggggttttatttcgaggggtgttatttggaggtgagtagtgacgatagatggttgtggatactgtgtttac |
174 |
Q |
| |
|
|||||||||||| ||||||||| ||||| | ||||||||| || ||||||| |||| |||||||||||||||||| ||| |||||||| |||||||| |
|
|
| T |
34388925 |
atgtggctcagcttgggtgttggggtatgagagttttattttga-gggtgttctttgtgggtgagtagtgacgataggcggtggtggatac-gtgtttac |
34388828 |
T |
|
| Q |
175 |
agggtttgtttctgttaaggtgtctgtcttaggtggtgatgtgttttggtaggtttatcttca |
237 |
Q |
| |
|
| | || || | || || || ||| |||||||||||||||||||| | |||||||||||| |
|
|
| T |
34388827 |
attgctttcttttttt--ggagtttgttttaggtggtgatgtgttttgctgggtttatcttca |
34388767 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 74 - 233
Target Start/End: Complemental strand, 41893322 - 41893168
Alignment:
| Q |
74 |
aatgtggctcagcgtgggtgttgaagtatgggggttttatttcgaggggtgttatttggaggtgagtagtgacgatagatggttgtggatactgtgttta |
173 |
Q |
| |
|
||||||||||||| |||||||||| || |||| ||| ||||| |||| |||| |||| |||||||||||||||| | ||| |||||||| ||||||| |
|
|
| T |
41893322 |
aatgtggctcagcttgggtgttgaggtctgggagttctattttcaggg-tgttctttgtgggtgagtagtgacgatggtcggtggtggataccgtgttta |
41893224 |
T |
|
| Q |
174 |
cagggtttgtttctgttaaggtgtctgtcttaggtggtgatgtgttttggtaggtttatc |
233 |
Q |
| |
|
||| |||||| | ||| |||||| |||||| ||||||||||||||| | |||||| |
|
|
| T |
41893223 |
cagttcttgtttttttta----gtctgttttaggtagtgatgtgttttggtggatttatc |
41893168 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 241
Target Start/End: Complemental strand, 32066078 - 32066040
Alignment:
| Q |
203 |
ttaggtggtgatgtgttttggtaggtttatcttcagggg |
241 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
32066078 |
ttaggtggtgatgtgttttggtgggtttatcttcagggg |
32066040 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 241
Target Start/End: Original strand, 27889126 - 27889171
Alignment:
| Q |
196 |
gtctgtcttaggtggtgatgtgttttggtaggtttatcttcagggg |
241 |
Q |
| |
|
|||||| |||||||||||||||||||||| ||||||||| |||||| |
|
|
| T |
27889126 |
gtctgttttaggtggtgatgtgttttggtgggtttatctccagggg |
27889171 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 241
Target Start/End: Original strand, 27947784 - 27947829
Alignment:
| Q |
196 |
gtctgtcttaggtggtgatgtgttttggtaggtttatcttcagggg |
241 |
Q |
| |
|
|||||| |||||||||||||||||||||| ||||||||| |||||| |
|
|
| T |
27947784 |
gtctgttttaggtggtgatgtgttttggtgggtttatctccagggg |
27947829 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 55 - 175
Target Start/End: Complemental strand, 37986798 - 37986678
Alignment:
| Q |
55 |
ttcggttaggagcttttcgaa-tgtggctcagcgtgggtgttgaagtatgggggttttatttcgaggggtgttatttggaggtgagtagtgacgatagat |
153 |
Q |
| |
|
|||||||||| ||| |||||| ||||||||||| |||||||| || |||| ||||||||| || ||||||| |||| |||||||| ||||||| | | |
|
|
| T |
37986798 |
ttcggttaggtgctcttcgaaatgtggctcagcttgggtgtttcggtctgggagttttatttgga-gggtgttctttgtgggtgagtaatgacgatgggt |
37986700 |
T |
|
| Q |
154 |
ggttgtggatactgtgtttaca |
175 |
Q |
| |
|
||| || ||||| ||||||||| |
|
|
| T |
37986699 |
ggtggtagataccgtgtttaca |
37986678 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 103; Significance: 3e-51; HSPs: 15)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 22 - 242
Target Start/End: Complemental strand, 35745799 - 35745576
Alignment:
| Q |
22 |
ggaggtcgagaggttgcagaagctgcaagttcattcggttaggagcttttcga---at-gtggctcagcgtgggtgttgaagtatgggggttttatttcg |
117 |
Q |
| |
|
|||||| ||||||||| ||||||||| ||||||||||||||||||||||||| || |||||||||| ||||||||||||| || ||||||||| | |
|
|
| T |
35745799 |
ggaggtggagaggttgtggaagctgcatgttcattcggttaggagcttttcgatatatagtggctcagcttgggtgttgaagtctgactgttttattttg |
35745700 |
T |
|
| Q |
118 |
aggggtgttatttggaggtgagtagtgacgatagatggttgtggatactgtgtttacagggtttgtttctgttaaggtgtctgtcttaggtggtgatgtg |
217 |
Q |
| |
|
|| |||||| ||||| |||||||||||||||| | ||| |||||| |||||||| | |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35745699 |
agaggtgttctttgggggtgagtagtgacgatgggtgggggtggatgttgtgtttagtgtgtttgtttctgttaaggtgtctgtcttaggtggtgatgtg |
35745600 |
T |
|
| Q |
218 |
ttttggtaggtttatcttcaggggc |
242 |
Q |
| |
|
||||||| || |||||||||||||| |
|
|
| T |
35745599 |
ttttggt-gggttatcttcaggggc |
35745576 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 75 - 241
Target Start/End: Original strand, 6585043 - 6585211
Alignment:
| Q |
75 |
atgtggctcagcgtgggtgttgaagtatgggggttttatttcgaggggtgttatttggaggtgagtagtgacgatagatggttgtggatactgtgtttac |
174 |
Q |
| |
|
|||||||||||| ||||||||||||| |||| ||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||| | |
|
|
| T |
6585043 |
atgtggctcagcttgggtgttgaagtctgggagttttattttgaggggtgctatttggaggtgagtagtgacgatgagtggttgtggatactgtgttttc |
6585142 |
T |
|
| Q |
175 |
ag-ggtttgtttctgttaaggtgtctgtctta-ggtggtgatgtgttttggtaggtttatcttcagggg |
241 |
Q |
| |
|
|| | |||||||||||||||||||| |||||| || |||||||||||| ||| | |||||||||||||| |
|
|
| T |
6585143 |
agtgttttgtttctgttaaggtgtccgtcttaggggggtgatgtgtttaggtggctttatcttcagggg |
6585211 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 18 - 166
Target Start/End: Original strand, 34390066 - 34390214
Alignment:
| Q |
18 |
gatcggaggtcgagaggttgcagaagctgcaagttcattcggttaggagcttttcgaatgtggctcagcgtgggtgttgaagtatgggggttttatttcg |
117 |
Q |
| |
|
|||||||||||||||||||| ||||||||| ||||||||| ||||||||||||| ||||||||||| | ||||||||| ||| |||| ||||||||| | |
|
|
| T |
34390066 |
gatcggaggtcgagaggttgtggaagctgcatgttcattcgattaggagcttttcaaatgtggctcaacttgggtgttgtagtctgggagttttattttg |
34390165 |
T |
|
| Q |
118 |
aggggtgttatttggaggtgagtagtgacgatagatggttgtggatact |
166 |
Q |
| |
|
||||||||| ||||| | |||||||||||||| | |||||| ||||||| |
|
|
| T |
34390166 |
aggggtgttctttggggatgagtagtgacgatgggtggttgcggatact |
34390214 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 75 - 241
Target Start/End: Original strand, 3867278 - 3867440
Alignment:
| Q |
75 |
atgtggctcagcgtgggtgttgaagtatgggggttttatttcgaggggtgttatttggaggtgagtagtgacgatagatggttgtggatactgtgtttac |
174 |
Q |
| |
|
|||||||||||| ||||||||| ||||||| ||||||||| ||||| |||| ||||| |||||||||||||||| || ||| ||||||| |||||||| |
|
|
| T |
3867278 |
atgtggctcagcttgggtgttggagtatggaagttttattttgaggg-tgttctttgggggtgagtagtgacgatggacggtggtggatatcgtgtttac |
3867376 |
T |
|
| Q |
175 |
agggtttgtttctgttaaggtgtctgtcttaggtggtgatgtgttttggtaggtttatcttcagggg |
241 |
Q |
| |
|
|| |||||| ||| |||| || ||| || ||||||||||||||||||| ||||||||||||||| |
|
|
| T |
3867377 |
ag---ttgtttttgtgaaggagtttgttttgggtggtgatgtgttttggtgagtttatcttcagggg |
3867440 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 37 - 241
Target Start/End: Complemental strand, 31972092 - 31971891
Alignment:
| Q |
37 |
gcagaagctgcaagttcattcggttaggagcttttcgaa-tgtggctcagcgtgggtgttgaagtatgggggttttatttcgaggggtgttatttggagg |
135 |
Q |
| |
|
||||||| |||| | || |||||||||| ||| |||||| ||||||||||| ||||||||| || |||| ||||||||| || ||||||| |||| || |
|
|
| T |
31972092 |
gcagaaggtgcatgatccttcggttaggtgctcttcgaaatgtggctcagcttgggtgttggggtctgggagttttatttgga-gggtgttctttgtggg |
31971994 |
T |
|
| Q |
136 |
tgagtagtgacgatagatggttgtggatactgtgtttacagggtttgtttctgttaaggtgtctgtcttaggtggtgatgtgttttggtaggtttatctt |
235 |
Q |
| |
|
|||||||||||||| | ||| || ||||| |||||||||| | |||||| || || || ||| ||||||||| |||||||||||| |||||||||| |
|
|
| T |
31971993 |
tgagtagtgacgatgggcggtggttgataccgtgtttacagtgcttgttt---ttttggagtttgttttaggtggttatgtgttttggtgggtttatctt |
31971897 |
T |
|
| Q |
236 |
cagggg |
241 |
Q |
| |
|
|||||| |
|
|
| T |
31971896 |
cagggg |
31971891 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 55 - 238
Target Start/End: Complemental strand, 47325825 - 47325643
Alignment:
| Q |
55 |
ttcggttaggagcttttcgaa-tgtggctcagcgtgggtgttgaagtatgggggttttatttcgaggggtgttatttggaggtgagtagtgacgatagat |
153 |
Q |
| |
|
|||||||||| ||| |||||| ||||||||||| ||||||||| || |||| ||||||||| || ||||||| |||| |||||||||||||||| | |
|
|
| T |
47325825 |
ttcggttaggtgctcttcgaaatgtggctcagcttgggtgttggggtctgggagttttattttga-gggtgttctttgtgggtgagtagtgacgatgggc |
47325727 |
T |
|
| Q |
154 |
ggttgtggatactgtgtttacagggtttgtttctgttaaggtgtctgtcttaggtggtgatgtgttttggtaggtttatcttcag |
238 |
Q |
| |
|
| | |||||||||||||||||| | |||||| | || | || ||| |||||||||||||||||||||| ||||||||||||| |
|
|
| T |
47325726 |
gatgatggatactgtgtttacagtgcttgttt-ttttttgaagtttgttttaggtggtgatgtgttttggtgggtttatcttcag |
47325643 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 162 - 242
Target Start/End: Original strand, 34391427 - 34391508
Alignment:
| Q |
162 |
atactgtgtttacagggttt-gtttctgttaaggtgtctgtcttaggtggtgatgtgttttggtaggtttatcttcaggggc |
242 |
Q |
| |
|
|||||||||||| || |||| |||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
34391427 |
atactgtgtttagagtgttttgtttctattaaggtgttcgtcttaggtggtgatgtgttttggtgggtttatcttcaggggc |
34391508 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 213
Target Start/End: Complemental strand, 48162002 - 48161810
Alignment:
| Q |
18 |
gatcggaggtcgagaggttgcagaagctgcaagttcattcggttaggagcttttcgaatgtggctcagcgtgggtgttgaagtatgggggttttatttcg |
117 |
Q |
| |
|
|||| ||||||||||||||| |||| ||| ||||||| |||||| ||||||||||||||||||| | ||| |||||||| || | |||||||| | |
|
|
| T |
48162002 |
gatcagaggtcgagaggttgtggaagttgcttgttcattgggttag-agcttttcgaatgtggctcgacttggc-gttgaagtctgagagttttattctg |
48161905 |
T |
|
| Q |
118 |
aggggtgtta-tttggaggtgagtagtgacgatagatggttgtggatactgtgtttacagggtttgtttctgttaaggtgtctgtcttaggtggtga |
213 |
Q |
| |
|
|| |||||| ||||| ||||| | |||||||||| |||||||||| |||| ||| || |||||||||| |||||||||||||||||| |||||| |
|
|
| T |
48161904 |
agaggtgttcgtttgggggtgaattgtgacgataggtggttgtgga--ctgtatttctagtgtttgtttctattaaggtgtctgtcttagatggtga |
48161810 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 234
Target Start/End: Complemental strand, 44353542 - 44353327
Alignment:
| Q |
18 |
gatcggaggtcgagaggttgcaga-agctgcaagttcattcggttaggagcttttcgaa-tgtggctcagcgtgggtgttgaagtatgggggttttattt |
115 |
Q |
| |
|
|||||||||||| |||||| || ||||||| | || |||||||||| ||| |||||| |||| | | || ||||||||| || |||| ||||||||| |
|
|
| T |
44353542 |
gatcggaggtcgcgaggtttgtgatagctgcatgatccttcggttaggtgctcttcgaaatgtgacccggcttgggtgttggggtctgggagttttattt |
44353443 |
T |
|
| Q |
116 |
cgaggggtgttatttggaggtgagtagtgacgatagatggttgtggatactgtgtttacagggtttgtttctgttaaggtgtctgtcttaggtggtgatg |
215 |
Q |
| |
|
||||||| |||| ||||||||||||||||| || ||| |||||||| |||||||||| | ||| || || || |||||| ||||||||||||| |
|
|
| T |
44353442 |
ttgagggtgttctttgtaggtgagtagtgacgatggacggtggtggataccgtgtttacagtgcttgatt---ttttggagtctgttttaggtggtgatg |
44353346 |
T |
|
| Q |
216 |
tgttttggtaggtttatct |
234 |
Q |
| |
|
||||||||| ||||||||| |
|
|
| T |
44353345 |
tgttttggtgggtttatct |
44353327 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 148
Target Start/End: Original strand, 8745255 - 8745388
Alignment:
| Q |
18 |
gatcggaggtcgagaggttgcagaagctgcaagttcattcggttaggagcttttcgaatgtggctcagcgtgggtgttgaagtatgggggttttatttcg |
117 |
Q |
| |
|
|||||||||||||||||||| ||||||||| | || ||| | ||||||||||||| |||||||||||| | |||||| ||| |||| |||| |||| | |
|
|
| T |
8745255 |
gatcggaggtcgagaggttgtggaagctgcatgatctttcagataggagcttttcggatgtggctcagctttggtgttcaagactgggagtttaattttg |
8745354 |
T |
|
| Q |
118 |
aggggtg---ttatttggaggtgagtagtgacga |
148 |
Q |
| |
|
||||||| || ||||| ||||||||||||||| |
|
|
| T |
8745355 |
aggggtgtttttctttgggggtgagtagtgacga |
8745388 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 42 - 241
Target Start/End: Original strand, 38306389 - 38306585
Alignment:
| Q |
42 |
agctgcaagttcattcggttaggagcttttcga-atgtggctcagcgtgggtgttgaagtatgggggttttatttcgaggggtgttatttggaggtgagt |
140 |
Q |
| |
|
||||||| | || |||||||| | ||| ||||| |||||||||||| ||||||||| || || | ||||||||| ||||| |||| |||| |||||||| |
|
|
| T |
38306389 |
agctgcatgatccttcggttaagtgctcttcgatatgtggctcagcttgggtgttggggtctgtgagttttattttgaggg-tgttctttgtaggtgagt |
38306487 |
T |
|
| Q |
141 |
agtgacgatagatggttgtggatactgtgtttacagggtttgtttctgttaaggtgtctgtcttaggtggtgatgtgttttggtaggtttatcttcaggg |
240 |
Q |
| |
|
||||||||| | |||| ||||||| |||| | ||| |||||| || || || ||| |||||||||||||||||||||| |||||||||| |||| |
|
|
| T |
38306488 |
agtgacgatgggtggtggtggatatcgtgtctgcagttcttgttt---tttgggagtttgttttaggtggtgatgtgttttggttggtttatctttaggg |
38306584 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 240
Target Start/End: Original strand, 25161089 - 25161133
Alignment:
| Q |
196 |
gtctgtcttaggtggtgatgtgttttggtaggtttatcttcaggg |
240 |
Q |
| |
|
|||||| |||||||||||||||||||||| ||||||||| ||||| |
|
|
| T |
25161089 |
gtctgttttaggtggtgatgtgttttggtgggtttatctccaggg |
25161133 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 241
Target Start/End: Complemental strand, 40726366 - 40726261
Alignment:
| Q |
134 |
ggtgagtagtgacgatagatggttgtggatactgtgtttacagggtttgtttctgttaaggtgtctgtcttaggtggtgatgtgttttggtaggtttatc |
233 |
Q |
| |
|
|||||||||||| ||||| ||| |||||||| |||||||| | | ||| || | || || |||||| ||||||||| |||||||||||| |||||||| |
|
|
| T |
40726366 |
ggtgagtagtgatgataggcggtggtggataccgtgtttaccgtgcttgattttttt--ggagtctgttttaggtggtaatgtgttttggtgggtttatc |
40726269 |
T |
|
| Q |
234 |
ttcagggg |
241 |
Q |
| |
|
| |||||| |
|
|
| T |
40726268 |
tccagggg |
40726261 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 196 - 241
Target Start/End: Complemental strand, 5860084 - 5860039
Alignment:
| Q |
196 |
gtctgtcttaggtggtgatgtgttttggtaggtttatcttcagggg |
241 |
Q |
| |
|
|||||| |||||||||||||||||||||| || ||||||| ||||| |
|
|
| T |
5860084 |
gtctgttttaggtggtgatgtgttttggtgggattatctttagggg |
5860039 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 24324776 - 24324699
Alignment:
| Q |
18 |
gatcggaggtcgagaggttgcagaagctgcaagttcattcggttaggagcttttcgaatgtggctcagcgtgggtgtt |
95 |
Q |
| |
|
|||||||||||||| ||| | ||||||| | | || ||||||||||||||||||| ||||||||||| | |||||| |
|
|
| T |
24324776 |
gatcggaggtcgaggggtggtggaagctgaatgatctttcggttaggagcttttcggctgtggctcagctttggtgtt |
24324699 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 55; Significance: 1e-22; HSPs: 5)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 75 - 241
Target Start/End: Complemental strand, 7161935 - 7161770
Alignment:
| Q |
75 |
atgtggctcagcgtgggtgttgaagtatgggggttttatttcgaggggtgttatttggaggtgagtagtgacgatagatggttgtggatactgtgtttac |
174 |
Q |
| |
|
|||||||||||| || |||||| || |||| ||||||||| || || |||| ||||| |||||||||||||| | | |||| ||||| | |||||||| |
|
|
| T |
7161935 |
atgtggctcagcttgtgtgttggggtctgggagttttattttgatgg-tgttctttgggggtgagtagtgacgttgggtggtggtggaaatcgtgtttac |
7161837 |
T |
|
| Q |
175 |
agggtttgtttctgttaaggtgtctgtcttaggtggtgatgtgttttggtaggtttatcttcagggg |
241 |
Q |
| |
|
|| | |||||| ||| |||| |||||| |||||| ||||||||||||||| ||||||| |||||||| |
|
|
| T |
7161836 |
agtgcttgtttttgtgaaggagtctgttttaggtagtgatgtgttttggtgggtttatattcagggg |
7161770 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 74 - 241
Target Start/End: Original strand, 18593404 - 18593567
Alignment:
| Q |
74 |
aatgtggctcagcgtgggtgttgaagtatgggggttttatttcgaggggtgttatttggaggtgagtagtgacgatagatggttgtggatactgtgttta |
173 |
Q |
| |
|
||||||||||| | ||||||||| || |||| ||||||||| |||| |||| |||| |||||||||||||||| | ||| |||||||| ||||||| |
|
|
| T |
18593404 |
aatgtggctcaacttgggtgttggggtctgggagttttatttggagga-tgttctttgtgggtgagtagtgacgatgggcggtggtggataccgtgttta |
18593502 |
T |
|
| Q |
174 |
cagggtttgtttctgttaaggtgtctgtcttaggtggtgatgtgttttggtaggtttatcttcagggg |
241 |
Q |
| |
|
||| | |||||| || || || ||| ||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
18593503 |
cagtgcttgttt---ttttggagtttgtgttaggtggtgatgtgttttggcgggtttatcttcagggg |
18593567 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 74 - 241
Target Start/End: Original strand, 34378259 - 34378424
Alignment:
| Q |
74 |
aatgtggctcagcgtgggtgttgaagtatgggggttttatttcgaggggtgttatttggaggtgagtagtgacgatagatggttgtggatactgtgttta |
173 |
Q |
| |
|
||||||||||||| ||||||||| || || | ||||||||| ||||| |||| |||| |||||||||||||||| || ||| |||||||| ||||||| |
|
|
| T |
34378259 |
aatgtggctcagcttgggtgttggggtttgagagttttattttgaggg-tgttctttgtgggtgagtagtgacgatggacggtggtggataccgtgttta |
34378357 |
T |
|
| Q |
174 |
cagggtttgtttctgttaaggtgtctgtcttaggtggtgatgtgttttggtaggtttatcttcagggg |
241 |
Q |
| |
|
|| | |||||| | || || ||| ||||||||||||||||||| || |||||||||||||||| |
|
|
| T |
34378358 |
ca-tgcttgttttttttttttagtttgttttaggtggtgatgtgtttttgtgggtttatcttcagggg |
34378424 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 134 - 240
Target Start/End: Original strand, 29087699 - 29087802
Alignment:
| Q |
134 |
ggtgagtagtgacgatagatggttgtggatactgtgtttacagggtttgtttctgttaaggtgtctgtcttaggtggtgatgtgttttggtaggtttatc |
233 |
Q |
| |
|
|||||||||||||||| | ||| ||| |||| |||||||||| | |||||| | | || |||||| ||||||| |||||||||||||| |||||||| |
|
|
| T |
29087699 |
ggtgagtagtgacgatgggcggtggtgaataccgtgtttacagtgcttgttttttt---ggagtctgttttaggtgctgatgtgttttggtgggtttatc |
29087795 |
T |
|
| Q |
234 |
ttcaggg |
240 |
Q |
| |
|
||||||| |
|
|
| T |
29087796 |
ttcaggg |
29087802 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 234
Target Start/End: Complemental strand, 18313445 - 18313407
Alignment:
| Q |
196 |
gtctgtcttaggtggtgatgtgttttggtaggtttatct |
234 |
Q |
| |
|
|||||| |||||||||||||||||||||| ||||||||| |
|
|
| T |
18313445 |
gtctgttttaggtggtgatgtgttttggtgggtttatct |
18313407 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 38; Significance: 0.000000000002; HSPs: 5)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 74 - 241
Target Start/End: Original strand, 14663238 - 14663405
Alignment:
| Q |
74 |
aatgtggctcagcgtgggtgttgaagtatgggggttttatttcgaggggtgttatttggaggtgagtagtgacgatagatggttgtggatactgtgttta |
173 |
Q |
| |
|
|||||||||| || ||| ||||| || |||| ||||||||| |||| |||| |||| |||||||||||||||| | ||| ||||||| |||||||| |
|
|
| T |
14663238 |
aatgtggctcggcttggatgttggggtttgggagttttattttgagga-tgttctttgcgggtgagtagtgacgatgggcggtggtggatattgtgttta |
14663336 |
T |
|
| Q |
174 |
caggg---tttgtttctgttaaggtgtctgtcttaggtggtgatgtgttttggtaggtttatcttcagggg |
241 |
Q |
| |
|
||| | ||||||| | || || |||||| ||||||||||||||||||| || ||||||||| |||||| |
|
|
| T |
14663337 |
cagtgctttttgtttttttt--ggagtctgttttaggtggtgatgtgttttcgtgggtttatctccagggg |
14663405 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 241
Target Start/End: Original strand, 15944274 - 15944324
Alignment:
| Q |
191 |
aaggtgtctgtcttaggtggtgatgtgttttggtaggtttatcttcagggg |
241 |
Q |
| |
|
|||| |||||| |||||||||||||||||||||| ||||||| |||||||| |
|
|
| T |
15944274 |
aaggagtctgttttaggtggtgatgtgttttggtgggtttatattcagggg |
15944324 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 20701782 - 20701716
Alignment:
| Q |
18 |
gatcggaggtcgagaggttgcagaagctgcaagttcattcggttaggagcttttcgaatgtggctca |
84 |
Q |
| |
|
|||||||||||||||||| | ||||||| | | || ||||| |||||||||||||||||||||||| |
|
|
| T |
20701782 |
gatcggaggtcgagaggtagtggaagctgaatgatctttcggataggagcttttcgaatgtggctca |
20701716 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 196 - 241
Target Start/End: Original strand, 3254237 - 3254282
Alignment:
| Q |
196 |
gtctgtcttaggtggtgatgtgttttggtaggtttatcttcagggg |
241 |
Q |
| |
|
|||||| |||||||||||||| ||||||| ||||||| |||||||| |
|
|
| T |
3254237 |
gtctgttttaggtggtgatgtattttggtgggtttattttcagggg |
3254282 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 235
Target Start/End: Original strand, 3117781 - 3117813
Alignment:
| Q |
203 |
ttaggtggtgatgtgttttggtaggtttatctt |
235 |
Q |
| |
|
||||||||||||||| ||||||||||||||||| |
|
|
| T |
3117781 |
ttaggtggtgatgtggtttggtaggtttatctt |
3117813 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0172 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0172
Description:
Target: scaffold0172; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 238
Target Start/End: Original strand, 19198 - 19240
Alignment:
| Q |
196 |
gtctgtcttaggtggtgatgtgttttggtaggtttatcttcag |
238 |
Q |
| |
|
|||||| |||||||||||||| ||||||| ||||||||||||| |
|
|
| T |
19198 |
gtctgttttaggtggtgatgtattttggtgggtttatcttcag |
19240 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0050 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0050
Description:
Target: scaffold0050; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 36811 - 36888
Alignment:
| Q |
18 |
gatcggaggtcgagaggttgcagaagctgcaagttcattcggttaggagcttttcgaatgtggctcagcgtgggtgtt |
95 |
Q |
| |
|
||||||||||||||| || | |||| || | | || |||||||||||||||||||| ||||||||||| | |||||| |
|
|
| T |
36811 |
gatcggaggtcgagatgtggtggaagttgaatggtctttcggttaggagcttttcgattgtggctcagctttggtgtt |
36888 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0343 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0343
Description:
Target: scaffold0343; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 55 - 174
Target Start/End: Original strand, 5847 - 5966
Alignment:
| Q |
55 |
ttcggttaggagcttttcg-aatgtggctcagcgtgggtgttgaagtatgggggttttatttcgaggggtgttatttggaggtgagtagtgacgatagat |
153 |
Q |
| |
|
|||||||||| ||| |||| ||||||||||||| ||||||||| | |||| ||||||||| || ||||||| |||| |||||||||||| ||| | |
|
|
| T |
5847 |
ttcggttaggtgctcttcgtaatgtggctcagcttgggtgttgggatctgggagttttattttga-gggtgttttttgtgggtgagtagtgatgatggga |
5945 |
T |
|
| Q |
154 |
ggttgtggatactgtgtttac |
174 |
Q |
| |
|
||| |||||||| ||||||| |
|
|
| T |
5946 |
ggtggtggataccatgtttac |
5966 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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