View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6510_low_37 (Length: 251)
Name: NF6510_low_37
Description: NF6510
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6510_low_37 |
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Alignment Details
Target: chr8 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 6 - 236
Target Start/End: Original strand, 35983513 - 35983743
Alignment:
| Q |
6 |
aggagcacagagatgtgactacaacatatagataaatcactcttgtattgctattccattatatctatatatttttgaataaaaaactacaactagtcct |
105 |
Q |
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| T |
35983513 |
aggaccaccgagatgtgactacaacatatagataaatcactcttgtattgctattccattatatctatatatttttgaataaaaaactacaactagtcct |
35983612 |
T |
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| Q |
106 |
ataaatataaattatttaagggatatagacgcagtagatgatccaaatccacatgaatttagacatggttggttgacnnnnnnnatccttaaaaattgat |
205 |
Q |
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| T |
35983613 |
ataaatataaattatttaagggatacagacgcagtagatgatccaaatccacatgaatttagacatggttggttgactttttttatccttaaaaattgat |
35983712 |
T |
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| Q |
206 |
tggataacttcagacaataccacttgaaaat |
236 |
Q |
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| T |
35983713 |
tggataacttcagacaacaccacttgaaaat |
35983743 |
T |
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