View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6510_low_6 (Length: 498)

Name: NF6510_low_6
Description: NF6510
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6510_low_6
NF6510_low_6
[»] chr5 (50 HSPs)
chr5 (169-471)||(9427389-9427692)
chr5 (224-466)||(13596960-13597202)
chr5 (387-466)||(9427303-9427382)
chr5 (18-129)||(5214258-5214370)
chr5 (342-466)||(9427209-9427334)
chr5 (339-468)||(13597264-13597393)
chr5 (18-119)||(11062350-11062452)
chr5 (18-119)||(39412154-39412256)
chr5 (18-119)||(8343044-8343144)
chr5 (18-118)||(26408946-26409047)
chr5 (18-119)||(4620979-4621081)
chr5 (18-124)||(31912959-31913065)
chr5 (18-119)||(38789951-38790053)
chr5 (122-171)||(9427728-9427777)
chr5 (18-119)||(22619745-22619844)
chr5 (18-119)||(34929540-34929640)
chr5 (387-466)||(13597218-13597298)
chr5 (387-466)||(13597416-13597496)
chr5 (20-126)||(2268565-2268672)
chr5 (18-119)||(18036221-18036323)
chr5 (18-119)||(18674157-18674259)
chr5 (18-119)||(23910609-23910711)
chr5 (18-119)||(38245050-38245152)
chr5 (66-119)||(8145030-8145083)
chr5 (387-463)||(13597509-13597585)
chr5 (18-125)||(20166058-20166166)
chr5 (18-116)||(17964958-17965057)
chr5 (64-118)||(3578002-3578056)
chr5 (387-460)||(9427123-9427196)
chr5 (18-119)||(25945636-25945738)
chr5 (64-119)||(2033740-2033795)
chr5 (64-119)||(16968716-16968771)
chr5 (64-119)||(30491895-30491950)
chr5 (64-118)||(974182-974236)
chr5 (18-119)||(23910297-23910399)
chr5 (20-118)||(4717124-4717223)
chr5 (64-119)||(15440522-15440577)
chr5 (18-126)||(20166375-20166484)
chr5 (18-126)||(23592475-23592584)
chr5 (67-119)||(2268229-2268281)
chr5 (67-119)||(5214596-5214648)
chr5 (64-118)||(9177215-9177269)
chr5 (18-119)||(18705803-18705905)
chr5 (18-119)||(26408639-26408741)
chr5 (67-96)||(23592811-23592840)
chr5 (66-118)||(3023921-3023973)
chr5 (67-103)||(13198243-13198279)
chr5 (67-119)||(27858390-27858442)
chr5 (79-119)||(31912705-31912745)
chr5 (67-119)||(39412478-39412530)
[»] chr2 (50 HSPs)
chr2 (18-131)||(2098282-2098396)
chr2 (18-119)||(430575-430675)
chr2 (18-128)||(32503972-32504084)
chr2 (18-121)||(9777281-9777385)
chr2 (18-119)||(32928023-32928125)
chr2 (20-124)||(40691393-40691498)
chr2 (18-124)||(42813872-42813980)
chr2 (64-119)||(8031073-8031128)
chr2 (18-119)||(3952223-3952325)
chr2 (18-119)||(18707832-18707934)
chr2 (18-119)||(25263656-25263760)
chr2 (18-118)||(18906927-18907028)
chr2 (18-124)||(33850763-33850870)
chr2 (18-119)||(970747-970849)
chr2 (18-119)||(14102574-14102676)
chr2 (18-118)||(11108716-11108817)
chr2 (18-118)||(18478379-18478480)
chr2 (18-118)||(39060409-39060510)
chr2 (18-113)||(32653822-32653918)
chr2 (64-119)||(4831115-4831170)
chr2 (20-119)||(4950023-4950122)
chr2 (18-124)||(41186246-41186353)
chr2 (18-119)||(16265680-16265781)
chr2 (18-124)||(32654126-32654232)
chr2 (19-119)||(5674303-5674404)
chr2 (18-118)||(7900263-7900363)
chr2 (64-118)||(3963380-3963435)
chr2 (20-119)||(4902625-4902724)
chr2 (64-119)||(14827500-14827555)
chr2 (64-127)||(34825676-34825739)
chr2 (18-124)||(40691593-40691700)
chr2 (64-118)||(42435005-42435059)
chr2 (66-119)||(11277997-11278050)
chr2 (67-124)||(14827855-14827912)
chr2 (18-118)||(19591664-19591765)
chr2 (64-124)||(5673992-5674052)
chr2 (67-119)||(8031378-8031430)
chr2 (67-119)||(16265587-16265639)
chr2 (67-119)||(32927712-32927764)
chr2 (67-119)||(41186605-41186657)
chr2 (64-119)||(45003098-45003153)
chr2 (22-119)||(4902911-4903009)
chr2 (67-129)||(28625455-28625517)
chr2 (67-121)||(28625826-28625880)
chr2 (67-124)||(430878-430935)
chr2 (67-119)||(2098624-2098676)
chr2 (67-119)||(9776973-9777025)
chr2 (67-119)||(11108409-11108461)
chr2 (67-119)||(18707495-18707547)
chr2 (67-119)||(32504340-32504392)
[»] scaffold0651 (2 HSPs)
scaffold0651 (18-119)||(6337-6438)
scaffold0651 (18-96)||(6055-6133)
[»] chr4 (51 HSPs)
chr4 (18-119)||(31317260-31317361)
chr4 (18-128)||(18436783-18436893)
chr4 (18-125)||(42598906-42599013)
chr4 (18-131)||(15169282-15169396)
chr4 (18-124)||(23205973-23206079)
chr4 (18-119)||(40005722-40005823)
chr4 (18-118)||(42495933-42496034)
chr4 (64-123)||(321646-321705)
chr4 (18-124)||(1613938-1614045)
chr4 (64-119)||(8444659-8444714)
chr4 (18-124)||(32328343-32328450)
chr4 (20-119)||(41965143-41965242)
chr4 (18-119)||(16335367-16335469)
chr4 (18-119)||(43979276-43979378)
chr4 (18-119)||(45311544-45311646)
chr4 (18-119)||(46008549-46008651)
chr4 (18-118)||(5814084-5814185)
chr4 (18-119)||(40147576-40147677)
chr4 (18-118)||(45226316-45226416)
chr4 (18-132)||(1922483-1922598)
chr4 (64-119)||(28693249-28693304)
chr4 (18-119)||(47690600-47690702)
chr4 (18-119)||(51892941-51893043)
chr4 (18-119)||(53940411-53940513)
chr4 (18-118)||(32384213-32384314)
chr4 (64-119)||(49264229-49264284)
chr4 (18-124)||(40147348-40147454)
chr4 (65-119)||(51716123-51716177)
chr4 (18-119)||(13199313-13199415)
chr4 (18-119)||(35377663-35377765)
chr4 (18-119)||(43562002-43562104)
chr4 (18-118)||(52096569-52096670)
chr4 (18-121)||(44589305-44589408)
chr4 (18-119)||(23205701-23205802)
chr4 (71-124)||(29526246-29526299)
chr4 (18-118)||(42208108-42208209)
chr4 (19-119)||(321957-322057)
chr4 (67-119)||(32384097-32384149)
chr4 (64-120)||(43980131-43980187)
chr4 (18-119)||(46008933-46009033)
chr4 (18-118)||(30560607-30560711)
chr4 (64-122)||(919532-919590)
chr4 (18-96)||(40005441-40005519)
chr4 (71-121)||(45226015-45226065)
chr4 (18-119)||(51892665-51892767)
chr4 (70-119)||(919180-919229)
chr4 (67-124)||(13198970-13199027)
chr4 (18-55)||(35377968-35378005)
chr4 (67-119)||(15168915-15168967)
chr4 (67-119)||(16335058-16335110)
chr4 (67-119)||(42496288-42496340)
[»] chr3 (41 HSPs)
chr3 (18-119)||(40790811-40790912)
chr3 (21-119)||(55328443-55328541)
chr3 (18-119)||(27957771-27957872)
chr3 (18-119)||(11692157-11692259)
chr3 (18-120)||(16731920-16732022)
chr3 (18-119)||(44638415-44638517)
chr3 (18-119)||(47358465-47358567)
chr3 (18-119)||(52836864-52836965)
chr3 (18-118)||(16222478-16222578)
chr3 (18-119)||(21561108-21561211)
chr3 (18-119)||(33092036-33092139)
chr3 (18-119)||(49665604-49665707)
chr3 (64-119)||(29015720-29015775)
chr3 (18-119)||(21440970-21441072)
chr3 (18-119)||(23460943-23461045)
chr3 (18-119)||(29352631-29352733)
chr3 (18-119)||(44397927-44398029)
chr3 (18-119)||(47982637-47982739)
chr3 (18-119)||(47991924-47992026)
chr3 (18-119)||(48001211-48001313)
chr3 (18-119)||(48010498-48010600)
chr3 (18-118)||(31705206-31705307)
chr3 (20-124)||(35565382-35565487)
chr3 (18-119)||(38443594-38443695)
chr3 (18-118)||(40036649-40036750)
chr3 (18-119)||(3017253-3017356)
chr3 (20-118)||(19987838-19987937)
chr3 (18-119)||(40393691-40393793)
chr3 (18-115)||(51753901-51753999)
chr3 (67-119)||(54090168-54090220)
chr3 (64-130)||(34682637-34682703)
chr3 (18-124)||(54803031-54803138)
chr3 (70-132)||(26050486-26050548)
chr3 (18-119)||(35565044-35565145)
chr3 (70-119)||(55328800-55328849)
chr3 (67-119)||(16222836-16222888)
chr3 (67-119)||(23461190-23461242)
chr3 (64-119)||(44638620-44638675)
chr3 (18-124)||(51754206-51754313)
chr3 (18-119)||(47358152-47358254)
chr3 (71-119)||(31705462-31705510)
[»] chr1 (55 HSPs)
chr1 (18-119)||(2937087-2937188)
chr1 (18-119)||(1342742-1342844)
chr1 (18-123)||(38019274-38019380)
chr1 (18-119)||(5132428-5132530)
chr1 (18-119)||(28486622-28486724)
chr1 (18-124)||(38872507-38872614)
chr1 (18-119)||(23253635-23253737)
chr1 (18-119)||(50755969-50756071)
chr1 (18-124)||(1366299-1366407)
chr1 (18-126)||(28838096-28838205)
chr1 (64-125)||(36466292-36466353)
chr1 (18-119)||(17077637-17077740)
chr1 (64-124)||(44396398-44396458)
chr1 (18-124)||(47648166-47648273)
chr1 (18-119)||(6782568-6782670)
chr1 (18-119)||(37350942-37351044)
chr1 (18-119)||(47672253-47672355)
chr1 (18-119)||(44519649-44519750)
chr1 (18-119)||(2731016-2731119)
chr1 (64-119)||(5905089-5905144)
chr1 (20-119)||(32005470-32005568)
chr1 (64-119)||(39950234-39950289)
chr1 (18-119)||(32487171-32487273)
chr1 (66-119)||(29548583-29548636)
chr1 (18-124)||(49628400-49628508)
chr1 (66-118)||(4487039-4487091)
chr1 (67-119)||(25378690-25378742)
chr1 (18-119)||(38717328-38717431)
chr1 (64-119)||(40125139-40125194)
chr1 (18-119)||(14291253-14291355)
chr1 (18-119)||(45951214-45951316)
chr1 (18-118)||(14556322-14556423)
chr1 (18-119)||(30057238-30057339)
chr1 (18-118)||(36302737-36302838)
chr1 (18-121)||(14556016-14556119)
chr1 (18-119)||(5132640-5132742)
chr1 (64-118)||(7838964-7839018)
chr1 (64-118)||(29721442-29721496)
chr1 (18-119)||(49628129-49628230)
chr1 (18-55)||(52346494-52346531)
chr1 (67-119)||(6782920-6782972)
chr1 (67-119)||(32486861-32486913)
chr1 (67-119)||(38872868-38872920)
chr1 (64-119)||(29715742-29715797)
chr1 (18-119)||(17077328-17077430)
chr1 (18-119)||(23253327-23253429)
chr1 (18-119)||(36465938-36466040)
chr1 (18-119)||(40124783-40124885)
chr1 (18-55)||(5904881-5904918)
chr1 (18-96)||(30056952-30057032)
chr1 (67-119)||(1342434-1342486)
chr1 (67-119)||(1366632-1366684)
chr1 (67-119)||(39524271-39524323)
chr1 (67-119)||(45950905-45950957)
chr1 (67-119)||(52346231-52346283)
[»] chr8 (31 HSPs)
chr8 (18-119)||(2705165-2705266)
chr8 (19-118)||(32924003-32924102)
chr8 (18-119)||(37405875-37405976)
chr8 (18-119)||(10495999-10496101)
chr8 (18-119)||(27696976-27697078)
chr8 (18-119)||(34181156-34181258)
chr8 (20-119)||(2232934-2233033)
chr8 (64-119)||(4528643-4528698)
chr8 (18-124)||(7050466-7050573)
chr8 (18-119)||(30795087-30795189)
chr8 (18-119)||(10837477-10837580)
chr8 (64-119)||(17696957-17697012)
chr8 (21-119)||(43857767-43857866)
chr8 (64-118)||(9855663-9855717)
chr8 (18-119)||(32539084-32539186)
chr8 (18-118)||(26695411-26695512)
chr8 (18-124)||(10837163-10837269)
chr8 (64-118)||(42686026-42686080)
chr8 (64-119)||(2057080-2057135)
chr8 (18-119)||(10495724-10495826)
chr8 (70-124)||(41441636-41441690)
chr8 (67-124)||(2232729-2232786)
chr8 (67-119)||(4528975-4529027)
chr8 (67-119)||(17696612-17696664)
chr8 (67-134)||(30794794-30794861)
chr8 (64-119)||(42216257-42216312)
chr8 (64-118)||(7229971-7230025)
chr8 (67-125)||(41441410-41441468)
chr8 (67-119)||(7050884-7050936)
chr8 (67-119)||(27696698-27696750)
chr8 (67-119)||(34181491-34181543)
[»] chr6 (32 HSPs)
chr6 (18-130)||(21002759-21002872)
chr6 (20-119)||(9566355-9566455)
chr6 (18-119)||(10143522-10143624)
chr6 (18-119)||(33360759-33360861)
chr6 (18-119)||(33705803-33705905)
chr6 (18-118)||(6390222-6390323)
chr6 (18-119)||(14630815-14630918)
chr6 (20-119)||(33877791-33877891)
chr6 (64-119)||(3199548-3199603)
chr6 (64-119)||(6535409-6535464)
chr6 (64-127)||(12396020-12396083)
chr6 (18-123)||(583658-583766)
chr6 (18-119)||(605749-605853)
chr6 (18-118)||(33243480-33243581)
chr6 (18-119)||(32218844-32218947)
chr6 (64-119)||(5146820-5146875)
chr6 (18-118)||(5997501-5997603)
chr6 (18-119)||(21904867-21904969)
chr6 (21-119)||(22695898-22695997)
chr6 (18-119)||(16408740-16408842)
chr6 (18-119)||(22695557-22695659)
chr6 (18-118)||(17204171-17204272)
chr6 (18-121)||(32219155-32219259)
chr6 (18-96)||(2793341-2793420)
chr6 (64-119)||(3199309-3199364)
chr6 (18-96)||(16409050-16409129)
chr6 (18-124)||(33360444-33360551)
chr6 (18-119)||(6389914-6390016)
chr6 (18-119)||(9565998-9566100)
chr6 (18-119)||(21905368-21905470)
chr6 (67-119)||(605479-605531)
chr6 (67-119)||(6535739-6535791)
[»] chr7 (37 HSPs)
chr7 (18-124)||(21766505-21766612)
chr7 (18-119)||(6626168-6626270)
chr7 (18-126)||(39997639-39997748)
chr7 (18-124)||(18732635-18732742)
chr7 (18-119)||(35193628-35193730)
chr7 (18-119)||(38816538-38816640)
chr7 (18-118)||(44141412-44141513)
chr7 (18-133)||(47404159-47404275)
chr7 (64-119)||(6607877-6607932)
chr7 (20-119)||(19276955-19277056)
chr7 (18-119)||(23999923-24000025)
chr7 (18-117)||(24164017-24164118)
chr7 (18-115)||(26174621-26174719)
chr7 (18-121)||(39103010-39103115)
chr7 (18-119)||(41320648-41320750)
chr7 (20-119)||(21438245-21438343)
chr7 (69-119)||(2765300-2765350)
chr7 (18-119)||(8952720-8952822)
chr7 (18-119)||(10336122-10336223)
chr7 (18-118)||(21276573-21276674)
chr7 (18-118)||(48863287-48863388)
chr7 (18-118)||(31849440-31849535)
chr7 (21-124)||(11638294-11638397)
chr7 (18-124)||(36508341-36508448)
chr7 (18-119)||(17356605-17356706)
chr7 (64-124)||(47913116-47913176)
chr7 (64-118)||(17356961-17357015)
chr7 (18-119)||(24164293-24164395)
chr7 (18-127)||(18732935-18733044)
chr7 (18-118)||(31657421-31657522)
chr7 (67-119)||(5850833-5850885)
chr7 (18-119)||(38567500-38567603)
chr7 (67-119)||(48863504-48863556)
chr7 (18-119)||(19276641-19276743)
chr7 (18-55)||(39385021-39385058)
chr7 (67-124)||(47913480-47913537)
chr7 (67-119)||(31849756-31849808)
[»] scaffold0275 (1 HSPs)
scaffold0275 (18-119)||(1268-1370)
[»] scaffold0170 (2 HSPs)
scaffold0170 (18-119)||(5511-5613)
scaffold0170 (67-119)||(5814-5866)
[»] scaffold0079 (2 HSPs)
scaffold0079 (18-119)||(57391-57493)
scaffold0079 (67-119)||(57750-57802)
[»] scaffold0015 (1 HSPs)
scaffold0015 (18-131)||(50025-50139)
[»] scaffold0009 (2 HSPs)
scaffold0009 (18-119)||(58449-58551)
scaffold0009 (18-119)||(58728-58830)
[»] scaffold0036 (1 HSPs)
scaffold0036 (64-129)||(16828-16893)
[»] scaffold1095 (1 HSPs)
scaffold1095 (64-119)||(23-78)
[»] scaffold0045 (1 HSPs)
scaffold0045 (21-132)||(35323-35436)
[»] scaffold0385 (1 HSPs)
scaffold0385 (18-118)||(12971-13071)
[»] scaffold0302 (2 HSPs)
scaffold0302 (18-124)||(14434-14541)
scaffold0302 (18-119)||(14127-14229)
[»] scaffold0825 (1 HSPs)
scaffold0825 (18-119)||(1176-1278)
[»] scaffold0044 (1 HSPs)
scaffold0044 (18-119)||(9845-9947)
[»] scaffold0229 (1 HSPs)
scaffold0229 (18-124)||(24345-24453)
[»] scaffold0185 (1 HSPs)
scaffold0185 (69-119)||(8065-8115)


Alignment Details
Target: chr5 (Bit Score: 239; Significance: 1e-132; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 169 - 471
Target Start/End: Complemental strand, 9427692 - 9427389
Alignment:
Q  169 aaatacactttcttgtttttcctagaccactattaatttgtcttctcatgttgcatttgtatagaaacttttgtaaattatcaaattatatagtcatttg 268  Q
    |||||||||||  ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9427692 aaatacacttttgtgtttttgctagaccactattaatttgtcttctcatgttgcatttgtatagaaacttttgtaaattatcaaattatatagtcatttg 9427593  T
Q  269 ataaatggaagatcatatatcgagttttatataatattgactttgataaacaacctattggtgtgccttgtgtttttattaggttatcttgattatttgc 368  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9427592 atatatggaagatcatatatcgagttttatataatattgactttgataaacaacctattggtgtgccttgtgtttttattaggttatcttgattatttgc 9427493  T
Q  369 ttatcattgagnnnnnnnattatattcttccttgtatttagaattttatgttaaccgaaattcatgttttactaagttatcttgatta-tttgcttgtca 467  Q
    |||||||||||       ||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||| ||||||||||||| ||||||||||     
T  9427492 ttatcattgagtttttttattatattcttccttgtattttgaattctatgttaatcgaaattcatgttttactaggttatcttgattattttgcttgtcg 9427393  T
Q  468 caag 471  Q
    ||||    
T  9427392 caag 9427389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 224 - 466
Target Start/End: Original strand, 13596960 - 13597202
Alignment:
Q  224 tttgtatagaaacttttgtaaattatcaaattatatagtcatttgataaatggaagatcatatatcgagttttatataatattgactttgataaacaacc 323  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13596960 tttgtatagaaacttttgtaaattatcaaattatatagtcatttgataattggaagatcatatatcgagttttatataatattgactttgataaacaacc 13597059  T
Q  324 tattggtgtgccttgtgtttttattaggttatcttgattatttgcttatcattgagnnnnnnnattatattcttccttgtatttagaattttatgttaac 423  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||| ||||| |||||||||    
T  13597060 tattggtgtgccttgtgtttttattaggttatcttgattatttgcttatcattgagtttttttattatattcttccttgtattttgaattctatgttaac 13597159  T
Q  424 cgaaattcatgttttactaagttatcttgattatttgcttgtc 466  Q
    ||||||||||||||||||| |||||||  ||||||| ||||||    
T  13597160 cgaaattcatgttttactaggttatctctattatttccttgtc 13597202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 387 - 466
Target Start/End: Complemental strand, 9427382 - 9427303
Alignment:
Q  387 attatattcttccttgtatttagaattttatgttaaccgaaattcatgttttactaagttatcttgattatttgcttgtc 466  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  9427382 attatattcttccttgtattttgaattctatgttaaccgaaattcatgttttattaggttatcttgattatttgcttgtc 9427303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 5214370 - 5214258
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| |||||||||||||||         |||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  5214370 accaatatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatattt 5214271  T
Q  117 aaatctaatttaa 129  Q
    ||| |||||||||    
T  5214270 aaacctaatttaa 5214258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 342 - 466
Target Start/End: Complemental strand, 9427334 - 9427209
Alignment:
Q  342 ttttattaggttatcttgattatttgcttatcattgagnnnnnnnattatattcttccttgtatttagaattttatgttaaccgaaattcatgtttt-ac 440  Q
    ||||||||||||||||||||||||||||| ||  | ||       ||||||||| ||||||||||| ||||| ||||||| |||||||||||||||| ||    
T  9427334 ttttattaggttatcttgattatttgcttgtcgctaagtttttttattatattcctccttgtattttgaattctatgttagccgaaattcatgttttgac 9427235  T
Q  441 taagttatcttgattatttgcttgtc 466  Q
    ||||||||||||||||||||| ||||    
T  9427234 taagttatcttgattatttgcctgtc 9427209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 339 - 468
Target Start/End: Original strand, 13597264 - 13597393
Alignment:
Q  339 tgtttttattaggttatcttgattatttgcttatcattgagnnnnnnnattatattcttccttgtatttagaattttatgttaaccgaaattcatgtttt 438  Q
    |||||| |||| |||||||||||||||||||| ||  | ||       ||||||||| ||||||||||| ||||| ||||||||||||||||||||||||    
T  13597264 tgttttgattaagttatcttgattatttgcttgtcgctaagtttttttattatattcctccttgtattttgaattctatgttaaccgaaattcatgtttt 13597363  T
Q  439 actaagttatcttgattatttgcttgtcac 468  Q
    |||| |||||||||| |||||| |||||||    
T  13597364 actaggttatcttgagtatttgtttgtcac 13597393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 11062452 - 11062350
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| |||||||||||||||         |||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  11062452 accaatatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatattt 11062353  T
Q  117 aaa 119  Q
    |||    
T  11062352 aaa 11062350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 39412256 - 39412154
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| |||||||||||||||         ||||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  39412256 accaatatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgtcaaaatctgatgaaagtgcaaggactaaatacatattt 39412157  T
Q  117 aaa 119  Q
    |||    
T  39412156 aaa 39412154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 8343144 - 8343044
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnntgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattta 117  Q
    |||||||| ||||||||||||| ||||||||||||||         |||||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  8343144 accaatatttttacaaagtgcagggaccaattccaaa-aaaaaaaatgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatattta 8343046  T
Q  118 aa 119  Q
    ||    
T  8343045 aa 8343044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 18 - 118
Target Start/End: Original strand, 26408946 - 26409047
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| |||||||||||||||         |||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  26408946 accaatatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatattt 26409045  T
Q  117 aa 118  Q
    ||    
T  26409046 aa 26409047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 18 - 119
Target Start/End: Original strand, 4620979 - 4621081
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| |||||||||||||||||||||||||||||         |||||||||||||| |||||||||||||||||| ||||||||||  |||||||    
T  4620979 accaatatttttacaaagtgcatggaccaattccaaacaaaaaaaaatgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaaagcatattt 4621078  T
Q  117 aaa 119  Q
    |||    
T  4621079 aaa 4621081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 18 - 124
Target Start/End: Original strand, 31912959 - 31913065
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnntgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattta 117  Q
    |||||||| |||||||||||||||||||||||||||||        ||||| ||||||||  |||||||||| |||||| ||||||||||| ||||||||    
T  31912959 accaatatttttacaaagtgcatggaccaattccaaacaaaaaaaatgtagagaccaatgctaaaatctgataaaagtgcaaggactaaaggcatattta 31913058  T
Q  118 aatctaa 124  Q
    || ||||    
T  31913059 aagctaa 31913065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 38790053 - 38789951
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| |||||||||||||||         ||||||||||||||||||||||||||||||||| |||||||||||  ||||||    
T  38790053 accaatatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgtcaaaatctgatgaaagtgcaaggactaaaggaatattt 38789954  T
Q  117 aaa 119  Q
    |||    
T  38789953 aaa 38789951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 122 - 171
Target Start/End: Complemental strand, 9427777 - 9427728
Alignment:
Q  122 taatttaaatattcttctcttagacttttgtggcatatgactttacaaaa 171  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9427777 taatttaaatattcttctcttagacttttgtggcatatgactttacaaaa 9427728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 18 - 119
Target Start/End: Original strand, 22619745 - 22619844
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnntgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattta 117  Q
    |||||||| ||||||||||||| |||||||||| |||         |||||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  22619745 accaatatttttacaaagtgcagggaccaattcaaaa--aaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatattta 22619842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 34929640 - 34929540
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnntgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattta 117  Q
    |||||||| ||| ||||||||| ||||||||||||||         |||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  34929640 accaatatttttgcaaagtgcagggaccaattccaaa-aaaaaaaatgtagggatcaatgtcaaaatctgatgaaagtgcaaggactaaagacatattta 34929542  T
Q  118 aa 119  Q
    ||    
T  34929541 aa 34929540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 387 - 466
Target Start/End: Original strand, 13597218 - 13597298
Alignment:
Q  387 attatattcttccttgtatttagaattttatgttaaccgaaattcatgtttt-actaagttatcttgattatttgcttgtc 466  Q
    ||||| ||| ||||||||||| ||||| ||||||| |||||||||||||||| | ||||||||||||||||||||||||||    
T  13597218 attattttcctccttgtattttgaattctatgttagccgaaattcatgttttgattaagttatcttgattatttgcttgtc 13597298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 387 - 466
Target Start/End: Original strand, 13597416 - 13597496
Alignment:
Q  387 attatattcttccttgtatttagaattttatgttaaccgaaattcatgtttt-actaagttatcttgattatttgcttgtc 466  Q
    ||||||||| ||||||||||| ||||| ||||||| |||||||||||||||| |||| ||||||||||||||||| |||||    
T  13597416 attatattcctccttgtattttgaattctatgttagccgaaattcatgttttgactaggttatcttgattatttgtttgtc 13597496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 20 - 126
Target Start/End: Original strand, 2268565 - 2268672
Alignment:
Q  20 caatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaa 118  Q
    |||||| ||||||||||||| ||| |||||||||||         |||||||||||||  |||||||||||||||||| |||||||||||||||||||||    
T  2268565 caatatttttacaaagtgcaaggatcaattccaaacaaaaaaaagtgtagggaccaataccaaaatctgatgaaagtgcaaggactaaagacatatttaa 2268664  T
Q  119 atctaatt 126  Q
    | ||||||    
T  2268665 acctaatt 2268672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 18036323 - 18036221
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| ||||||||| |||||         |||||||||||||| |||||||||||||||||| ||||||||||||||| |||    
T  18036323 accaatatttttacaaagtgcagggaccaatttcaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacattttt 18036224  T
Q  117 aaa 119  Q
    |||    
T  18036223 aaa 18036221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 18 - 119
Target Start/End: Original strand, 18674157 - 18674259
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnnt-gtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| |||||||||||||||          ||||||||||||| |||||||||||||||||| ||||||||||| |||||||    
T  18674157 accaatatttttacaaagtgcagggaccaattccaaacaaaaaaaaaagtagggaccaatgccaaaatctgatgaaagtgcaaggactaaaggcatattt 18674256  T
Q  117 aaa 119  Q
    |||    
T  18674257 aaa 18674259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 18 - 119
Target Start/End: Original strand, 23910609 - 23910711
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| |||| |||||||| |||||||||||||||         |||||||||||||| |||||||||||||||||| ||||||||||| |||||||    
T  23910609 accaatatttttataaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaaggcatattt 23910708  T
Q  117 aaa 119  Q
    |||    
T  23910709 aaa 23910711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 18 - 119
Target Start/End: Original strand, 38245050 - 38245152
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| |||||||||||||||         |||| ||||||||| |||||||||||||||||| ||||||||||| |||||||    
T  38245050 accaatatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtatggaccaatgccaaaatctgatgaaagtgcaaggactaaaggcatattt 38245149  T
Q  117 aaa 119  Q
    |||    
T  38245150 aaa 38245152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 66 - 119
Target Start/End: Original strand, 8145030 - 8145083
Alignment:
Q  66 tagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaa 119  Q
    |||||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  8145030 tagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaa 8145083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 387 - 463
Target Start/End: Original strand, 13597509 - 13597585
Alignment:
Q  387 attatattcttccttgtatttagaattttatgttaaccgaaattcatgtttt-actaagttatcttgattatttgctt 463  Q
    ||||||||| ||||||||||| ||||| |||||| ||||||||||||||||| ||||| |||||||||||||||||||    
T  13597509 attatattcctccttgtattttgaattctatgtt-accgaaattcatgttttgactaaattatcttgattatttgctt 13597585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 18 - 125
Target Start/End: Complemental strand, 20166166 - 20166058
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| |||||||||||||||||| ||||||||||         |||||||| ||||| |||||||||||||||||| ||| ||||||| |||||||    
T  20166166 accaatatttttacaaagtgcatggactaattccaaacaaaaaaaagtgtagggatcaatgccaaaatctgatgaaagtgcaagaactaaaggcatattt 20166067  T
Q  117 aaatctaat 125  Q
    ||| |||||    
T  20166066 aaacctaat 20166058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 18 - 116
Target Start/End: Original strand, 17964958 - 17965057
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| |||||||||||||||         |||||||||||||| ||||||||||| |||||| ||||||||||| |||||||    
T  17964958 accaatatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgataaaagtgcaaggactaaaggcatattt 17965057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 64 - 118
Target Start/End: Complemental strand, 3578056 - 3578002
Alignment:
Q  64 tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaa 118  Q
    |||||||||||||| |||||||||||||||||| | |||||||||||||||||||    
T  3578056 tgtagggaccaatgccaaaatctgatgaaagtgcagggactaaagacatatttaa 3578002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 387 - 460
Target Start/End: Complemental strand, 9427196 - 9427123
Alignment:
Q  387 attatattcttccttgtatttagaattttatgttaaccgaaattcatgtttt-actaagttatcttgattatttg 460  Q
    ||||||||| ||||||||||| ||||| |||||| ||||||||||||||||| ||||| ||||||||||||||||    
T  9427196 attatattcctccttgtattttgaattctatgtt-accgaaattcatgttttgactaaattatcttgattatttg 9427123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 119
Target Start/End: Original strand, 25945636 - 25945738
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| |||||||||||||||         | |||||||||||| |||||||||||||||||| ||||||||||| | |||||    
T  25945636 accaatatttttacaaagtgcaaggaccaattccaaacaaaaaaaagtatagggaccaatgccaaaatctgatgaaagtgcaaggactaaaggcgtattt 25945735  T
Q  117 aaa 119  Q
    |||    
T  25945736 aaa 25945738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 64 - 119
Target Start/End: Complemental strand, 2033795 - 2033740
Alignment:
Q  64 tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaa 119  Q
    |||||| ||||||| |||||||||||||||||| ||||||||||| ||||||||||    
T  2033795 tgtaggaaccaatgccaaaatctgatgaaagtgcaaggactaaaggcatatttaaa 2033740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 64 - 119
Target Start/End: Complemental strand, 16968771 - 16968716
Alignment:
Q  64 tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaa 119  Q
    |||||||||||||||||||||||||| ||||||||| |||||||  ||||||||||    
T  16968771 tgtagggaccaatgtcaaaatctgataaaagtgtaaagactaaaagcatatttaaa 16968716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 64 - 119
Target Start/End: Complemental strand, 30491950 - 30491895
Alignment:
Q  64 tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaa 119  Q
    ||||||||||||||  |||||||||| |||||| ||||||||||||||||||||||    
T  30491950 tgtagggaccaatgcaaaaatctgataaaagtgcaaggactaaagacatatttaaa 30491895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 64 - 118
Target Start/End: Original strand, 974182 - 974236
Alignment:
Q  64 tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaa 118  Q
    |||||||||||||  |||||||||||||||||| | |||||||||||||||||||    
T  974182 tgtagggaccaataccaaaatctgatgaaagtgcagggactaaagacatatttaa 974236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 23910399 - 23910297
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| |||||||| ||||||         ||||||||||||||||||||||||||||||||| | |||| || |||| ||||    
T  23910399 accaatatttttacaaagtgcagggaccaatgccaaacaaaaaaaagtgtagggaccaatgtcaaaatctgatgaaagtgcagggaccaatgacacattt 23910300  T
Q  117 aaa 119  Q
    |||    
T  23910299 aaa 23910297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 20 - 118
Target Start/End: Original strand, 4717124 - 4717223
Alignment:
Q  20 caatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaa 118  Q
    |||||| || |||||||||| |||||||||||||||         |||||||| ||||| |||||||||||||||||| | ||||||||| |||||||||    
T  4717124 caatattttcacaaagtgcagggaccaattccaaacaaaaaaaagtgtagggatcaatgccaaaatctgatgaaagtgcagggactaaaggcatatttaa 4717223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 64 - 119
Target Start/End: Complemental strand, 15440577 - 15440522
Alignment:
Q  64 tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaa 119  Q
    |||||||||||||  ||||||||||| |||||| |||||||||| |||||||||||    
T  15440577 tgtagggaccaataccaaaatctgataaaagtgcaaggactaaatacatatttaaa 15440522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 126
Target Start/End: Original strand, 20166375 - 20166484
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| |||||||| ||||||         || ||||||||||| |||||||||||||||||| | |||| || |||| ||||    
T  20166375 accaatatttttacaaagtgcagggaccaatgccaaacaaaaaaaagtgcagggaccaatgccaaaatctgatgaaagtgcagggaccaatgacacattt 20166474  T
Q  117 aaatctaatt 126  Q
    ||| ||||||    
T  20166475 aaacctaatt 20166484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 126
Target Start/End: Complemental strand, 23592584 - 23592475
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| |||||||| ||||||         || |||||||||| ||||||||||||||||||| | |||| || |||| ||||    
T  23592584 accaatatttttacaaagtgcagggaccaatgccaaacaaaaaaaagtgcagggaccaatatcaaaatctgatgaaagtgcagggaccaatgacacattt 23592485  T
Q  117 aaatctaatt 126  Q
    ||| ||||||    
T  23592484 aaacctaatt 23592475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 67 - 119
Target Start/End: Complemental strand, 2268281 - 2268229
Alignment:
Q  67 agggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaa 119  Q
    ||||||||||| |||||||||||||||||| | ||||||| |||| |||||||    
T  2268281 agggaccaatgccaaaatctgatgaaagtgcagggactaatgacacatttaaa 2268229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 67 - 119
Target Start/End: Original strand, 5214596 - 5214648
Alignment:
Q  67 agggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaa 119  Q
    |||||||||||||||||||||||||||||| | |||| || |||| |||||||    
T  5214596 agggaccaatgtcaaaatctgatgaaagtgcatggaccaatgacacatttaaa 5214648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 64 - 118
Target Start/End: Original strand, 9177215 - 9177269
Alignment:
Q  64 tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaa 118  Q
    |||||||||||||| |||||| ||||||||||| | | |||||||| ||||||||    
T  9177215 tgtagggaccaatgccaaaatatgatgaaagtgcaggaactaaagatatatttaa 9177269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 119
Target Start/End: Original strand, 18705803 - 18705905
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaac-nnnnnnnntgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| |||||||||||||||         | ||  |||||||  |||||| ||||||||||| || ||||||||||||||||    
T  18705803 accaatatttttacaaagtgcagggaccaattccaaacaaaaaaaagtataacgaccaataccaaaatttgatgaaagtgcaaagactaaagacatattt 18705902  T
Q  117 aaa 119  Q
    |||    
T  18705903 aaa 18705905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 26408741 - 26408639
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| |||||||| ||||||         || ||||||||||| |||||||||||||||||| | |||| || |||| ||||    
T  26408741 accaatatttttacaaagtgcagggaccaatgccaaacaaaaaaaagtgcagggaccaatgccaaaatctgatgaaagtgcagggaccaatgacacattt 26408642  T
Q  117 aaa 119  Q
    |||    
T  26408641 aaa 26408639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 96
Target Start/End: Original strand, 23592811 - 23592840
Alignment:
Q  67 agggaccaatgtcaaaatctgatgaaagtg 96  Q
    ||||||||||||||||||||||||||||||    
T  23592811 agggaccaatgtcaaaatctgatgaaagtg 23592840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 66 - 118
Target Start/End: Original strand, 3023921 - 3023973
Alignment:
Q  66 tagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaa 118  Q
    ||||||||||| ||||||||| || |||||| | ||||||||| |||||||||    
T  3023921 tagggaccaatatcaaaatctaataaaagtgcagggactaaaggcatatttaa 3023973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 67 - 103
Target Start/End: Original strand, 13198243 - 13198279
Alignment:
Q  67 agggaccaatgtcaaaatctgatgaaagtgtaaggac 103  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  13198243 agggaccaatgccaaaatctgatgaaagtgcaaggac 13198279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 67 - 119
Target Start/End: Complemental strand, 27858442 - 27858390
Alignment:
Q  67 agggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaa 119  Q
    ||||||||||| |||||||||||||||||| | |||| || |||| |||||||    
T  27858442 agggaccaatgccaaaatctgatgaaagtgcagggaccaatgacacatttaaa 27858390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 119
Target Start/End: Complemental strand, 31912745 - 31912705
Alignment:
Q  79 caaaatctgatgaaagtgtaaggactaaagacatatttaaa 119  Q
    |||||||||||||||||| |||||  |||||||||||||||    
T  31912745 caaaatctgatgaaagtgcaaggatcaaagacatatttaaa 31912705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 67 - 119
Target Start/End: Original strand, 39412478 - 39412530
Alignment:
Q  67 agggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaa 119  Q
    ||||||||||| |||||||||||||||||| | |||| || |||| |||||||    
T  39412478 agggaccaatgccaaaatctgatgaaagtgcagggaccaatgacacatttaaa 39412530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 63; Significance: 4e-27; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 18 - 131
Target Start/End: Complemental strand, 2098396 - 2098282
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| |||||||||||||||||||||| ||||||         |||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  2098396 accaatatttttacaaagtgcatggaccaataccaaacaaaagaaagtgtagggaccaatgtcaaaatctgatgaaaatgtaaggactaatgacatattt 2098297  T
Q  117 aaatctaatttaaat 131  Q
    ||| |||||||||||    
T  2098296 aaacctaatttaaat 2098282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 430675 - 430575
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnntgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattta 117  Q
    |||||||| ||||||||||||| |||||||||||||||        |||||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  430675 accaatat-tttacaaagtgcagggaccaattccaaacaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatattta 430577  T
Q  118 aa 119  Q
    ||    
T  430576 aa 430575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 32504084 - 32503972
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn--tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatt 115  Q
    |||||||| ||||||||||||| |||||||||||||||          |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  32504084 accaatatttttacaaagtgcagggaccaattccaaacaaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgtaaggactaaagacatatt 32503985  T
Q  116 taaatctaattta 128  Q
    |||| ||| ||||    
T  32503984 taaacctatttta 32503972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 18 - 121
Target Start/End: Original strand, 9777281 - 9777385
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| |||||||||||||||         |||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  9777281 accaatatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatattt 9777380  T
Q  117 aaatc 121  Q
    |||||    
T  9777381 aaatc 9777385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 119
Target Start/End: Original strand, 32928023 - 32928125
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| |||||||||||||||         |||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  32928023 accaatatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatattt 32928122  T
Q  117 aaa 119  Q
    |||    
T  32928123 aaa 32928125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 20 - 124
Target Start/End: Complemental strand, 40691498 - 40691393
Alignment:
Q  20 caatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaa 118  Q
    |||||| ||||||||||||| |||||||||||||||         |||||||||||||| |||||||||||||||||| |||||||||||||||||||||    
T  40691498 caatatttttacaaagtgcagggaccaattccaaacaaaaaaaaatgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaa 40691399  T
Q  119 atctaa 124  Q
    | ||||    
T  40691398 acctaa 40691393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 42813980 - 42813872
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn--tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatt 115  Q
    |||||||| ||||||||||||  |||||||||||||||          ||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  42813980 accaatatttttacaaagtgctgggaccaattccaaacaaaaaaaaagtgtagggaccaatgtcaaaatctgatgaaagtgcaaggactaaaaacatatt 42813881  T
Q  116 taaatctaa 124  Q
    |||| ||||    
T  42813880 taaacctaa 42813872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 64 - 119
Target Start/End: Complemental strand, 8031128 - 8031073
Alignment:
Q  64 tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaa 119  Q
    |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  8031128 tgtatggaccaatgtcaaaatctgatgaaagtgcaaggactaaagacatatttaaa 8031073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 18 - 119
Target Start/End: Original strand, 3952223 - 3952325
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| ||||||||| |||||         |||| ||||||||| |||||||||||||||||| |||||||||||||||||||    
T  3952223 accaatatttttacaaagtgcagggaccaatttcaaacaaaaaaaagtgtatggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatattt 3952322  T
Q  117 aaa 119  Q
    |||    
T  3952323 aaa 3952325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 18 - 119
Target Start/End: Original strand, 18707832 - 18707934
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| ||| |||||||||||         ||||| |||||||| |||||||||||||||||| |||||||||||||||||||    
T  18707832 accaatatttttacaaagtgcaaggatcaattccaaacaaaaaaaagtgtagagaccaatgccaaaatctgatgaaagtgcaaggactaaagacatattt 18707931  T
Q  117 aaa 119  Q
    |||    
T  18707932 aaa 18707934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 18 - 119
Target Start/End: Original strand, 25263656 - 25263760
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn---tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatat 114  Q
    |||||||| |||||||||||||||||||||||||||||           |||||||||||||| |||||||||||||||||| ||||||||||  |||||    
T  25263656 accaatatttttacaaagtgcatggaccaattccaaacaaaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaaagcatat 25263755  T
Q  115 ttaaa 119  Q
    |||||    
T  25263756 ttaaa 25263760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 18 - 118
Target Start/End: Complemental strand, 18907028 - 18906927
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||| | |||||||||||||||         |||||||||||||| |||||||||||||||||| | |||||||||||||||||    
T  18907028 accaatatttttacaaagtgtagggaccaattccaaacaaaataaagtgtagggaccaatgccaaaatctgatgaaagtgcagggactaaagacatattt 18906929  T
Q  117 aa 118  Q
    ||    
T  18906928 aa 18906927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 18 - 124
Target Start/End: Original strand, 33850763 - 33850870
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| |||||||||||||||         ||||||| |||||| |||||||||||||||||| ||||||||||  |||||||    
T  33850763 accaatatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtaggggccaatgccaaaatctgatgaaagtgcaaggactaaatgcatattt 33850862  T
Q  117 aaatctaa 124  Q
    ||| ||||    
T  33850863 aaacctaa 33850870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 119
Target Start/End: Original strand, 970747 - 970849
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| ||||||||| |||||         |||||||||||||| |||||||||||||||||| ||||||||||  |||||||    
T  970747 accaatatttttacaaagtgcagggaccaatttcaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaatgcatattt 970846  T
Q  117 aaa 119  Q
    |||    
T  970847 aaa 970849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 14102676 - 14102574
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| |||||||||||||||         |||||||||||||| ||||||||||| |||||   ||||||||||||||||||    
T  14102676 accaatatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgataaaagttcgaggactaaagacatattt 14102577  T
Q  117 aaa 119  Q
    |||    
T  14102576 aaa 14102574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 18 - 118
Target Start/End: Original strand, 11108716 - 11108817
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| |||||||||| ||||         |||||||||||||| |||||||||||||||||| | |||||||||| ||||||    
T  11108716 accaatatttttacaaagtgcagggaccaattctaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcagggactaaagatatattt 11108815  T
Q  117 aa 118  Q
    ||    
T  11108816 aa 11108817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 18 - 118
Target Start/End: Complemental strand, 18478480 - 18478379
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| |||||||||||||||         ||||||||| |||||||||||||||||||| || | ||||||||| |||||||    
T  18478480 accaatatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtagggactaatgtcaaaatctgatgaaaatgcagggactaaaggcatattt 18478381  T
Q  117 aa 118  Q
    ||    
T  18478380 aa 18478379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 18 - 118
Target Start/End: Complemental strand, 39060510 - 39060409
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||||||||||||||||||          || ||||||||||  |||||||||||||||||| | |||||||||||||||||    
T  39060510 accaatatgtttacaaagtgcatggaccaattccaaaaaaaaaaaagtgcagggaccaataccaaaatctgatgaaagtgcagggactaaagacatattt 39060411  T
Q  117 aa 118  Q
    ||    
T  39060410 aa 39060409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 18 - 113
Target Start/End: Complemental strand, 32653918 - 32653822
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacata 113  Q
    |||||||| ||||||||||||| |||||||||||||||         |||||||||||||| |||||||||||||||||| |||||| |||| ||||    
T  32653918 accaatatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggacgaaaggcata 32653822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 64 - 119
Target Start/End: Complemental strand, 4831170 - 4831115
Alignment:
Q  64 tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaa 119  Q
    ||||||||||||| |||||| |||||||||||| ||||||||||||||| ||||||    
T  4831170 tgtagggaccaatatcaaaacctgatgaaagtgcaaggactaaagacatgtttaaa 4831115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 119
Target Start/End: Complemental strand, 4950122 - 4950023
Alignment:
Q  20 caatatatttacaaagtgcatggaccaattccaaacnnnnnnnntgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaa 119  Q
    |||||| ||||||||||||| |||||||| ||||||        || |||||||||||||||||||||||||||||| | |||| || |||| |||||||    
T  4950122 caatatttttacaaagtgcagggaccaatgccaaacaaaaaaagtgcagggaccaatgtcaaaatctgatgaaagtgcagggaccaatgacacatttaaa 4950023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 41186353 - 41186246
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| ||||||||| |||||         ||||| |||||||| |||||||||||||||||| | |||| ||||||||||||    
T  41186353 accaatatttttacaaagtgcagggaccaatttcaaacaaaaaaaagtgtagagaccaatgccaaaatctgatgaaagtgcatggaccaaagacatattt 41186254  T
Q  117 aaatctaa 124  Q
    ||| ||||    
T  41186253 aaacctaa 41186246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 18 - 119
Target Start/End: Original strand, 16265680 - 16265781
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| |||||||||||||||         |||| ||| |||| ||||||||||||||||||  |||||||||||||||||||    
T  16265680 accaatatttttacaaagtgca-ggaccaattccaaacaaaaagaaatgtaaggatcaatatcaaaatctgatgaaagtacaaggactaaagacatattt 16265778  T
Q  117 aaa 119  Q
    |||    
T  16265779 aaa 16265781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 18 - 124
Target Start/End: Original strand, 32654126 - 32654232
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnntgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattta 117  Q
    |||||||| ||||||||||||| |||||||| ||||||        || |||||||||| ||||||||||||||||||| | |||| || |||| |||||    
T  32654126 accaatatttttacaaagtgcagggaccaatgccaaacaaaaaaagtgcagggaccaatatcaaaatctgatgaaagtgcagggaccaatgacacattta 32654225  T
Q  118 aatctaa 124  Q
    || ||||    
T  32654226 aacctaa 32654232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 119
Target Start/End: Original strand, 5674303 - 5674404
Alignment:
Q  19 ccaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattta 117  Q
    ||||||| ||||||||||||| || ||||||||||||         ||||||||||||||  |||||||||| |||||| ||| ||||||||||||||||    
T  5674303 ccaatatttttacaaagtgcaggggccaattccaaacaaaaaaaagtgtagggaccaatgctaaaatctgataaaagtgcaagaactaaagacatattta 5674402  T
Q  118 aa 119  Q
    ||    
T  5674403 aa 5674404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 18 - 118
Target Start/End: Complemental strand, 7900363 - 7900263
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| |||||||||||||||         ||||||||||||||  ||||||||||||||||| | |||||||||| ||||||    
T  7900363 accaatatttttacaaagtgca-ggaccaattccaaacaaaaaaaagtgtagggaccaatgctaaaatctgatgaaagtgcagggactaaagatatattt 7900265  T
Q  117 aa 118  Q
    ||    
T  7900264 aa 7900263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 64 - 118
Target Start/End: Original strand, 3963380 - 3963435
Alignment:
Q  64 tgtagggaccaa-tgtcaaaatctgatgaaagtgtaaggactaaagacatatttaa 118  Q
    |||||||||||| || |||||||||||||||||| | |||||||||||||||||||    
T  3963380 tgtagggaccaaatgccaaaatctgatgaaagtgcagggactaaagacatatttaa 3963435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 20 - 119
Target Start/End: Complemental strand, 4902724 - 4902625
Alignment:
Q  20 caatatatttacaaagtgcatggaccaattccaaacnnnnnnnntgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaa 119  Q
    |||||| ||||||||||||| |||||||| ||||||        || ||||||||||| |||||||||||||||||| | |||| || |||| |||||||    
T  4902724 caatatttttacaaagtgcagggaccaatgccaaacaaaaaaagtgcagggaccaatgacaaaatctgatgaaagtgcagggaccaatgacacatttaaa 4902625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 64 - 119
Target Start/End: Complemental strand, 14827555 - 14827500
Alignment:
Q  64 tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaa 119  Q
    ||||||||| |||  |||||||||||||||||| ||||||||||| ||||||||||    
T  14827555 tgtagggacaaataccaaaatctgatgaaagtgcaaggactaaaggcatatttaaa 14827500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 64 - 127
Target Start/End: Complemental strand, 34825739 - 34825676
Alignment:
Q  64 tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaatctaattt 127  Q
    |||||||||||||| |||||| ||||||||||| |  ||||||||||||||||||  |||||||    
T  34825739 tgtagggaccaatgccaaaatatgatgaaagtgcagagactaaagacatatttaagcctaattt 34825676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 18 - 124
Target Start/End: Original strand, 40691593 - 40691700
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaac-nnnnnnnntgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| |||||||||||||||||||||| ||||||         || ||||||||||| |||||||||||||||||| | |||| || |||| ||||    
T  40691593 accaatatttttacaaagtgcatggaccaatgccaaacaaaaaaaagtgcagggaccaatgccaaaatctgatgaaagtgcagggaccaatgacacattt 40691692  T
Q  117 aaatctaa 124  Q
    ||| ||||    
T  40691693 aaacctaa 40691700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 64 - 118
Target Start/End: Original strand, 42435005 - 42435059
Alignment:
Q  64 tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaa 118  Q
    |||||||||||||| |||||||||||||||||| |  |||||| |||||||||||    
T  42435005 tgtagggaccaatgccaaaatctgatgaaagtgcagagactaatgacatatttaa 42435059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 66 - 119
Target Start/End: Complemental strand, 11278050 - 11277997
Alignment:
Q  66 tagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaa 119  Q
    ||||||| ||||  ||||||||||||||||| |||||||||| |||||||||||    
T  11278050 tagggactaatgctaaaatctgatgaaagtgcaaggactaaaaacatatttaaa 11277997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 67 - 124
Target Start/End: Original strand, 14827855 - 14827912
Alignment:
Q  67 agggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaatctaa 124  Q
    ||||||||||| |||||||||||||||||| |||||| || |||| ||||||| ||||    
T  14827855 agggaccaatgccaaaatctgatgaaagtgcaaggaccaatgacacatttaaacctaa 14827912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 118
Target Start/End: Original strand, 19591664 - 19591765
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||| ||| ||||||||||||| |||||||||||||||         |||||||||||||| |||||||||||||||||  | || |||||||||| |||    
T  19591664 accagtatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgacaaaatctgatgaaagtacaggggctaaagacatgttt 19591763  T
Q  117 aa 118  Q
    ||    
T  19591764 aa 19591765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 124
Target Start/End: Complemental strand, 5674052 - 5673992
Alignment:
Q  64 tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaatctaa 124  Q
    |||||||||||||||||||||||||| |||||| | |||| || |||| ||||||| ||||    
T  5674052 tgtagggaccaatgtcaaaatctgataaaagtgcagggaccaatgacacatttaaacctaa 5673992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 67 - 119
Target Start/End: Original strand, 8031378 - 8031430
Alignment:
Q  67 agggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaa 119  Q
    ||||||||||||||||||||||||||| || |||||| || |||| |||||||    
T  8031378 agggaccaatgtcaaaatctgatgaaaatgcaaggaccaatgacacatttaaa 8031430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 67 - 119
Target Start/End: Complemental strand, 16265639 - 16265587
Alignment:
Q  67 agggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaa 119  Q
    |||||||||||||||||||||||||||||| | |||| || |||| |||||||    
T  16265639 agggaccaatgtcaaaatctgatgaaagtgcagggaccaatgacacatttaaa 16265587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 67 - 119
Target Start/End: Complemental strand, 32927764 - 32927712
Alignment:
Q  67 agggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaa 119  Q
    ||||||||||| |||||||||||||||||| | |||| || ||||||||||||    
T  32927764 agggaccaatgccaaaatctgatgaaagtgcagggaccaatgacatatttaaa 32927712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 67 - 119
Target Start/End: Original strand, 41186605 - 41186657
Alignment:
Q  67 agggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaa 119  Q
    |||||||||||||||||||||||||||||| | |||| || |||| |||||||    
T  41186605 agggaccaatgtcaaaatctgatgaaagtgcagggaccaacgacacatttaaa 41186657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 64 - 119
Target Start/End: Original strand, 45003098 - 45003153
Alignment:
Q  64 tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaa 119  Q
    |||| ||||||||| |||||| ||||||||||| ||||||||||  ||||||||||    
T  45003098 tgtatggaccaatgccaaaatttgatgaaagtgcaaggactaaacgcatatttaaa 45003153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 22 - 119
Target Start/End: Original strand, 4902911 - 4903009
Alignment:
Q  22 atatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaa 119  Q
    |||| ||||||||||||| |||||||||||||||         || ||||||||||| |||||||||||||||||| | |||| || |||| |||||||    
T  4902911 atatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgcagggaccaatgccaaaatctgatgaaagtgcagggaccaatgacacatttaaa 4903009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 67 - 129
Target Start/End: Complemental strand, 28625517 - 28625455
Alignment:
Q  67 agggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaatctaatttaa 129  Q
    |||||| |||| ||||||| |||||||||| | ||| |||||||||||||||| |||| ||||    
T  28625517 agggactaatgccaaaatccgatgaaagtgcagggagtaaagacatatttaaacctaaattaa 28625455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 67 - 121
Target Start/End: Original strand, 28625826 - 28625880
Alignment:
Q  67 agggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaatc 121  Q
    |||||||||||||||||||||||||||||| |  ||| || |||| |||||||||    
T  28625826 agggaccaatgtcaaaatctgatgaaagtgcagcgaccaatgacacatttaaatc 28625880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 124
Target Start/End: Original strand, 430878 - 430935
Alignment:
Q  67 agggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaatctaa 124  Q
    ||||||||||| |||||||||||||||||| | |||| || |||| ||||||| ||||    
T  430878 agggaccaatgccaaaatctgatgaaagtgcagggaccaatgacacatttaaacctaa 430935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 67 - 119
Target Start/End: Original strand, 2098624 - 2098676
Alignment:
Q  67 agggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaa 119  Q
    ||||||||||| |||||||||||||||||| | |||| || |||| |||||||    
T  2098624 agggaccaatgccaaaatctgatgaaagtgcagggaccaatgacacatttaaa 2098676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 67 - 119
Target Start/End: Complemental strand, 9777025 - 9776973
Alignment:
Q  67 agggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaa 119  Q
    ||||||||||| |||||||||||||||||| | |||| || |||| |||||||    
T  9777025 agggaccaatgccaaaatctgatgaaagtgcagggaccaatgacacatttaaa 9776973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 67 - 119
Target Start/End: Complemental strand, 11108461 - 11108409
Alignment:
Q  67 agggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaa 119  Q
    ||||| ||||| |||||||||||||||||||| |||| || |||| |||||||    
T  11108461 agggatcaatgccaaaatctgatgaaagtgtagggaccaatgacacatttaaa 11108409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 67 - 119
Target Start/End: Complemental strand, 18707547 - 18707495
Alignment:
Q  67 agggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaa 119  Q
    ||||||||||| |||||||||||||||||| | |||| || |||| |||||||    
T  18707547 agggaccaatgccaaaatctgatgaaagtgcagggaccaatgacacatttaaa 18707495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 67 - 119
Target Start/End: Original strand, 32504340 - 32504392
Alignment:
Q  67 agggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaa 119  Q
    ||||||||||| |||||||||||||||||| | |||| || |||| |||||||    
T  32504340 agggaccaatgccaaaatctgatgaaagtgcagggaccaatgacacatttaaa 32504392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0651 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: scaffold0651
Description:

Target: scaffold0651; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 18 - 119
Target Start/End: Original strand, 6337 - 6438
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnntgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattta 117  Q
    |||||||| ||||||||||||| |||||||||||||||        |||||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  6337 accaatatttttacaaagtgcagggaccaattccaaacaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatattta 6436  T
Q  118 aa 119  Q
    ||    
T  6437 aa 6438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0651; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 6133 - 6055
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnntgtagggaccaatgtcaaaatctgatgaaagtg 96  Q
    |||||||| ||||||||||||| |||||||||||||||        |||||||||||||| ||||||||||||||||||    
T  6133 accaatatttttacaaagtgcagggaccaattccaaacaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtg 6055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 62; Significance: 1e-26; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 31317361 - 31317260
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnntgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattta 117  Q
    |||||||| ||||||||||||| |||||||||||||||        |||||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  31317361 accaatatttttacaaagtgcagggaccaattccaaacaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatattta 31317262  T
Q  118 aa 119  Q
    ||    
T  31317261 aa 31317260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 18436893 - 18436783
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnntgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattta 117  Q
    |||||||| ||||||||||||| |||||||||||||||        |||||||||||||| |||||||||||||||||| ||||||||||| ||||||||    
T  18436893 accaatatttttacaaagtgcagggaccaattccaaacaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaaggcatattta 18436794  T
Q  118 aatctaattta 128  Q
    || | ||||||    
T  18436793 aaccaaattta 18436783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 18 - 125
Target Start/End: Complemental strand, 42599013 - 42598906
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnntgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattta 117  Q
    |||||||| ||||||||||||| ||| |||||||||||        |||||||||||||| |||||||||||||||||| ||||||||||| ||||||||    
T  42599013 accaatatttttacaaagtgcagggatcaattccaaacaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaaggcatattta 42598914  T
Q  118 aatctaat 125  Q
    || |||||    
T  42598913 aacctaat 42598906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 131
Target Start/End: Original strand, 15169282 - 15169396
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| |||||||||||||||         |||||||||||| | ||||||||||||||||||  ||||||||||||||||||    
T  15169282 accaatatttttacaaagtgcagggaccaattccaaacaaaaaaaaatgtagggaccaacgccaaaatctgatgaaagtgccaggactaaagacatattt 15169381  T
Q  117 aaatctaatttaaat 131  Q
    ||| |||||||||||    
T  15169382 aaacctaatttaaat 15169396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 124
Target Start/End: Original strand, 23205973 - 23206079
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnntgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattta 117  Q
    |||||||| ||||||||||||| ||||||||||||||         ||||||||| |||| |||||||||||||||||| ||||||||||||||||||||    
T  23205973 accaatatttttacaaagtgcagggaccaattccaaataaaaaaagtgtagggactaatgccaaaatctgatgaaagtgaaaggactaaagacatattta 23206072  T
Q  118 aatctaa 124  Q
    || ||||    
T  23206073 aacctaa 23206079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 18 - 119
Target Start/End: Original strand, 40005722 - 40005823
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnntgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattta 117  Q
    |||||||| ||||||||||||| |||||||||||||||        |||||||||||||| |||||||||||||||||| |||||||||||  |||||||    
T  40005722 accaatatttttacaaagtgcagggaccaattccaaacaaaaaaaatgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaaggtatattta 40005821  T
Q  118 aa 119  Q
    ||    
T  40005822 aa 40005823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 18 - 118
Target Start/End: Complemental strand, 42496034 - 42495933
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| |||||||||||||||         ||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  42496034 accaatatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgtcaaaatctgatgaaagtgcagggactaaagacatattt 42495935  T
Q  117 aa 118  Q
    ||    
T  42495934 aa 42495933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 64 - 123
Target Start/End: Complemental strand, 321705 - 321646
Alignment:
Q  64 tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaatcta 123  Q
    |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  321705 tgtagggaccaatgccaaaatctgatgaaagtgtaaggactaaaaacatatttaaatcta 321646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 1614045 - 1613938
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| |||||||||||||||         |||||||||||||| |||||||||||||||||| ||||||||||| |||||||    
T  1614045 accaatatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaaggcatattt 1613946  T
Q  117 aaatctaa 124  Q
    ||| ||||    
T  1613945 aaacctaa 1613938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 64 - 119
Target Start/End: Complemental strand, 8444714 - 8444659
Alignment:
Q  64 tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaa 119  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  8444714 tgtagggaccaatgccaaaatctgatgaaagtgtaaggactaaagacatatttaaa 8444659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 18 - 124
Target Start/End: Original strand, 32328343 - 32328450
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| ||||||||| |||||         |||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  32328343 accaatatttttacaaagtgcagggaccaatttcaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatattt 32328442  T
Q  117 aaatctaa 124  Q
    ||| ||||    
T  32328443 aaacctaa 32328450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 20 - 119
Target Start/End: Complemental strand, 41965242 - 41965143
Alignment:
Q  20 caatatatttacaaagtgcatggaccaattccaaacnnnnnnnntgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaa 119  Q
    |||||| ||||||||||||| ||||||||||||||         |||||||||||||| |||||||||||||||||| ||||| ||||||||||||||||    
T  41965242 caatatttttacaaagtgcagggaccaattccaaaaaaaaaaaatgtagggaccaatgccaaaatctgatgaaagtgcaaggattaaagacatatttaaa 41965143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 18 - 119
Target Start/End: Original strand, 16335367 - 16335469
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| |||||||||||||||         |||||||||||||| |||||| |||||||||||||||||||||| ||||||||    
T  16335367 accaatatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatatgatgaaagtgtaaggactaaatacatattt 16335466  T
Q  117 aaa 119  Q
    |||    
T  16335467 aaa 16335469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 43979378 - 43979276
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| |||||||||||||||         |||||||||||||| |||||||||||||||||| ||||| |||||||||||||    
T  43979378 accaatatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggattaaagacatattt 43979279  T
Q  117 aaa 119  Q
    |||    
T  43979278 aaa 43979276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 18 - 119
Target Start/End: Original strand, 45311544 - 45311646
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| |||||||||||||||         |||| ||||||||| |||||||||||||||||| |||||||||||||||||||    
T  45311544 accaatatttttacaaagtgcagggaccaattccaaacaaaaaaaaatgtaaggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatattt 45311643  T
Q  117 aaa 119  Q
    |||    
T  45311644 aaa 45311646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 46008651 - 46008549
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| |||||||||||||||         |||||||||||||| |||||||||||||||||| ||||||||||| |||||||    
T  46008651 accaatatttttacaaagtgcaaggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaaggcatattt 46008552  T
Q  117 aaa 119  Q
    |||    
T  46008551 aaa 46008549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 18 - 118
Target Start/End: Original strand, 5814084 - 5814185
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| |||||||||||||||         |||||||||||||| |||||||||||||||||| | |||||||||||||||||    
T  5814084 accaatatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcagggactaaagacatattt 5814183  T
Q  117 aa 118  Q
    ||    
T  5814184 aa 5814185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 18 - 119
Target Start/End: Original strand, 40147576 - 40147677
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnntgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattta 117  Q
    |||||||| |||||||||||||  ||||||||||||||        || ||||||||||| |||||||||||||||||| |||| |||||||||||||||    
T  40147576 accaatatttttacaaagtgcagagaccaattccaaacaaaaaaagtgcagggaccaatgccaaaatctgatgaaagtgcaaggtctaaagacatattta 40147675  T
Q  118 aa 119  Q
    ||    
T  40147676 aa 40147677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 18 - 118
Target Start/End: Original strand, 45226316 - 45226416
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnntgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattta 117  Q
    |||||||| ||||||||||||| |||||||||||||||        |||||||||||||| |||||| ||||||||||| | ||||||||| ||||||||    
T  45226316 accaatatttttacaaagtgcagggaccaattccaaacaaaaaaagtgtagggaccaatgccaaaatttgatgaaagtgcagggactaaaggcatattta 45226415  T
Q  118 a 118  Q
    |    
T  45226416 a 45226416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 18 - 132
Target Start/End: Complemental strand, 1922598 - 1922483
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| |||| |||||||||| |||||||||||||         |||||| ||||||| |||||||||||||||||| ||||||||||| |||||||    
T  1922598 accaatatttttataaagtgcatgaaccaattccaaacaaaaagaagtgtaggaaccaatgccaaaatctgatgaaagtgcaaggactaaaggcatattt 1922499  T
Q  117 aaatctaatttaaata 132  Q
    ||| |||||| |||||    
T  1922498 aaacctaattaaaata 1922483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 64 - 119
Target Start/End: Original strand, 28693249 - 28693304
Alignment:
Q  64 tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaa 119  Q
    |||||||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  28693249 tgtagggaccaatgacaaaatctgatgaaagtgcaaggactaaagacatatttaaa 28693304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 18 - 119
Target Start/End: Original strand, 47690600 - 47690702
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||| | |||||||||||||||         |||||||||||||| |||||||||||||||||| | |||||||||||||||||    
T  47690600 accaatatttttacaaagtgtagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcagggactaaagacatattt 47690699  T
Q  117 aaa 119  Q
    |||    
T  47690700 aaa 47690702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 18 - 119
Target Start/End: Original strand, 51892941 - 51893043
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||| | |||||||||||||||         |||||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  51892941 accaatatttttacaaagtgtagggaccaattccaaacaaaaaaaagtgtagggatcaatgccaaaatctgatgaaagtgcaaggactaaagacatattt 51893040  T
Q  117 aaa 119  Q
    |||    
T  51893041 aaa 51893043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 53940513 - 53940411
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| |||||||||||||||||||||||||||||         | || ||| ||||||||||||||||| |||||| |||||||||||||||||||    
T  53940513 accaatatttttacaaagtgcatggaccaattccaaacaaaaaaaagtatatggatcaatgtcaaaatctgataaaagtgcaaggactaaagacatattt 53940414  T
Q  117 aaa 119  Q
    |||    
T  53940413 aaa 53940411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 18 - 118
Target Start/End: Original strand, 32384213 - 32384314
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| |||||||||||||||         |||| ||||||||| |||||||||||||||||| | |||||||||||||||||    
T  32384213 accaatatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtatggaccaatgccaaaatctgatgaaagtgcagggactaaagacatattt 32384312  T
Q  117 aa 118  Q
    ||    
T  32384313 aa 32384314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 64 - 119
Target Start/End: Original strand, 49264229 - 49264284
Alignment:
Q  64 tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaa 119  Q
    |||||||||||||| |||||||||||||||||| |||||| |||||||||||||||    
T  49264229 tgtagggaccaatgccaaaatctgatgaaagtgcaaggacgaaagacatatttaaa 49264284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 40147454 - 40147348
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnntgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattta 117  Q
    |||||||| ||||||||||||| |||||||||||||||        || ||||||||||| |||||||||||||||||| | |||| || |||| |||||    
T  40147454 accaatatttttacaaagtgcagggaccaattccaaacaaaaaaagtgcagggaccaatgccaaaatctgatgaaagtgcagggaccaatgacacattta 40147355  T
Q  118 aatctaa 124  Q
    || ||||    
T  40147354 aacctaa 40147348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 65 - 119
Target Start/End: Complemental strand, 51716177 - 51716123
Alignment:
Q  65 gtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaa 119  Q
    ||||||||||||| |||||| ||||||||||| ||||||||||||||||||||||    
T  51716177 gtagggaccaatgccaaaatttgatgaaagtgcaaggactaaagacatatttaaa 51716123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 18 - 119
Target Start/End: Original strand, 13199313 - 13199415
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| ||| |||||||||||         |||||||||||||| |||||||||||||||||| ||||| |||||  ||||||    
T  13199313 accaatatttttacaaagtgcagggatcaattccaaacaaaaataagtgtagggaccaatgccaaaatctgatgaaagtgcaaggattaaaggtatattt 13199412  T
Q  117 aaa 119  Q
    |||    
T  13199413 aaa 13199415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 35377765 - 35377663
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| |||||||||||||||         |||||||||||||  ||||||||||| |||||| ||||||||||  |||||||    
T  35377765 accaatatttttacaaagtgcaaggaccaattccaaacaaaaaaaagtgtagggaccaataccaaaatctgataaaagtgcaaggactaaacgcatattt 35377666  T
Q  117 aaa 119  Q
    |||    
T  35377665 aaa 35377663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 18 - 119
Target Start/End: Original strand, 43562002 - 43562104
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||| | |||||||||||||||         |||||||||||||| ||||||||||||||| || | ||||||||| |||||||    
T  43562002 accaatatttttacaaagtgaagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaaatgcagggactaaaggcatattt 43562101  T
Q  117 aaa 119  Q
    |||    
T  43562102 aaa 43562104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 18 - 118
Target Start/End: Complemental strand, 52096670 - 52096569
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||| | |||||||||||||||         |||| ||||||||| ||||||||||||||| || | |||||||||||||||||    
T  52096670 accaatatttttacaaagtgtagggaccaattccaaacaaaataaagtgtatggaccaatgccaaaatctgatgaaaatgcagggactaaagacatattt 52096571  T
Q  117 aa 118  Q
    ||    
T  52096570 aa 52096569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 121
Target Start/End: Original strand, 44589305 - 44589408
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| |||||||||||||||         |||||||| |||||  ||||||||||| ||||  |||||||||||||||||||    
T  44589305 accaatatttttacaaagtgca-ggaccaattccaaacaaaaaaaagtgtagggatcaatgctaaaatctgatggaagtacaaggactaaagacatattt 44589403  T
Q  117 aaatc 121  Q
    |||||    
T  44589404 aaatc 44589408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 23205802 - 23205701
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnntgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattta 117  Q
    |||||||| ||||||||||||| ||||||||  |||||        || ||||||||||| |||||||||||||||||| | |||| || |||| |||||    
T  23205802 accaatatttttacaaagtgcagggaccaatgtcaaacaaaaaaagtgcagggaccaatgccaaaatctgatgaaagtgcagggaccaatgacacattta 23205703  T
Q  118 aa 119  Q
    ||    
T  23205702 aa 23205701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 71 - 124
Target Start/End: Complemental strand, 29526299 - 29526246
Alignment:
Q  71 accaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaatctaa 124  Q
    ||||||| |||||||||||||||||| |||||| ||||||| ||||||| ||||    
T  29526299 accaatgccaaaatctgatgaaagtgcaaggaccaaagacacatttaaacctaa 29526246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 118
Target Start/End: Original strand, 42208108 - 42208209
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| ||| |||||||||||         ||||| |||||||| |||||||||||||||||| | ||| ||||| |||||||    
T  42208108 accaatatttttacaaagtgcagggatcaattccaaacaaaaaaaagtgtagagaccaatgccaaaatctgatgaaagtgcagggattaaaggcatattt 42208207  T
Q  117 aa 118  Q
    ||    
T  42208208 aa 42208209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 119
Target Start/End: Original strand, 321957 - 322057
Alignment:
Q  19 ccaatatatttacaaagtgcatggaccaattccaaacnnnnnnnntgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaa 118  Q
    ||||||| ||||||||||||| |||||||| | ||||        || ||||||||||| |||||||||||||||||| | |||| || |||| ||||||    
T  321957 ccaatatttttacaaagtgcagggaccaatgcgaaacaaaaaaagtgcagggaccaatgccaaaatctgatgaaagtgcagggaccaatgacacatttaa 322056  T
Q  119 a 119  Q
    |    
T  322057 a 322057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 67 - 119
Target Start/End: Complemental strand, 32384149 - 32384097
Alignment:
Q  67 agggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaa 119  Q
    ||||||||||| |||||||||||||||||| | |||| || ||||||||||||    
T  32384149 agggaccaatgccaaaatctgatgaaagtgcagggaccaatgacatatttaaa 32384097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 120
Target Start/End: Original strand, 43980131 - 43980187
Alignment:
Q  64 tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaat 120  Q
    |||||||||||||| |||||||||||||||||| | |||| || |||| ||||||||    
T  43980131 tgtagggaccaatgccaaaatctgatgaaagtgcagggaccaatgacacatttaaat 43980187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 119
Target Start/End: Original strand, 46008933 - 46009033
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnntgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattta 117  Q
    |||||||| ||||||||||||| |||||||| ||||||        || ||||||||||| |||||||||||||||||| | |||| || |||| |||||    
T  46008933 accaatatttttacaaagtgcagggaccaataccaaacaaaaaag-tgcagggaccaatgccaaaatctgatgaaagtgcagggaccaatgacacattta 46009031  T
Q  118 aa 119  Q
    ||    
T  46009032 aa 46009033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 118
Target Start/End: Original strand, 30560607 - 30560711
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn----tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacata 113  Q
    |||||||| ||||||||||||| |||||||||||||||            ||| |||||||||| |||||| ||||||||||| | | ||||||||||||    
T  30560607 accaatatttttacaaagtgcagggaccaattccaaacaaaaaaaaaaagtgttgggaccaatgccaaaatatgatgaaagtgcaggaactaaagacata 30560706  T
Q  114 tttaa 118  Q
    |||||    
T  30560707 tttaa 30560711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 64 - 122
Target Start/End: Original strand, 919532 - 919590
Alignment:
Q  64 tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaatct 122  Q
    |||||||| ||||| ||||||||||| ||| |||| | | |||||||||||||||||||    
T  919532 tgtagggatcaatgccaaaatctgataaaaatgtaggaattaaagacatatttaaatct 919590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 40005519 - 40005441
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnntgtagggaccaatgtcaaaatctgatgaaagtg 96  Q
    |||||||| ||||||||||||| |||||||| ||||          || ||||||||||||||||||||||||||||||    
T  40005519 accaatatttttacaaagtgcagggaccaatgccaataaaaaaaattgcagggaccaatgtcaaaatctgatgaaagtg 40005441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 71 - 121
Target Start/End: Complemental strand, 45226065 - 45226015
Alignment:
Q  71 accaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaatc 121  Q
    ||||||| |||||||||||||||||| |  |||||||| ||||||||||||    
T  45226065 accaatgccaaaatctgatgaaagtggagtgactaaaggcatatttaaatc 45226015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 51892767 - 51892665
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| |||||||| ||||||         || ||||||||||| |||||||||||||||||| | |||| || |||| ||||    
T  51892767 accaatatttttacaaagtgcagggaccaatgccaaacaaaaaaaagtgcagggaccaatgccaaaatctgatgaaagtgcagggaccaatgacacattt 51892668  T
Q  117 aaa 119  Q
    |||    
T  51892667 aaa 51892665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 70 - 119
Target Start/End: Complemental strand, 919229 - 919180
Alignment:
Q  70 gaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaa 119  Q
    |||||||| |||||||||||||||||| | ||||||| |||| |||||||    
T  919229 gaccaatgccaaaatctgatgaaagtgcagggactaatgacacatttaaa 919180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 124
Target Start/End: Complemental strand, 13199027 - 13198970
Alignment:
Q  67 agggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaatctaa 124  Q
    ||||||||||| |||||||||||||||||| | |||| || |||| ||||||| ||||    
T  13199027 agggaccaatgccaaaatctgatgaaagtgcagggaccaatgacacatttaaacctaa 13198970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 35377968 - 35378005
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaac 55  Q
    |||||||| |||||||||||||||||||||| ||||||    
T  35377968 accaatatttttacaaagtgcatggaccaataccaaac 35378005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 67 - 119
Target Start/End: Complemental strand, 15168967 - 15168915
Alignment:
Q  67 agggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaa 119  Q
    ||||||||||| |||||||||||||||||| | |||| || |||| |||||||    
T  15168967 agggaccaatgccaaaatctgatgaaagtgcagggaccaatgacacatttaaa 15168915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 67 - 119
Target Start/End: Complemental strand, 16335110 - 16335058
Alignment:
Q  67 agggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaa 119  Q
    ||||||||||| |||||||||||||||||| | |||| || |||| |||||||    
T  16335110 agggaccaatgccaaaatctgatgaaagtgcagggaccaatgacagatttaaa 16335058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 67 - 119
Target Start/End: Original strand, 42496288 - 42496340
Alignment:
Q  67 agggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaa 119  Q
    ||||||||||| |||||||||||||||||| | |||| || |||| |||||||    
T  42496288 agggaccaatgccaaaatctgatgaaagtgcagggaccaatgacacatttaaa 42496340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 62; Significance: 1e-26; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 40790912 - 40790811
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnntgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattta 117  Q
    |||||||| ||||||||||||| |||||||||||||||        |||||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  40790912 accaatatttttacaaagtgcagggaccaattccaaacaaaaaaaatgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatattta 40790813  T
Q  118 aa 119  Q
    ||    
T  40790812 aa 40790811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 21 - 119
Target Start/End: Complemental strand, 55328541 - 55328443
Alignment:
Q  21 aatatatttacaaagtgcatggaccaattccaaacnnnnnnnntgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaa 119  Q
    ||||| |||||||| |||| |||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  55328541 aatatttttacaaaatgcagggaccaattccaaacaaaaaaaatgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaaggcatatttaaa 55328443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 18 - 119
Target Start/End: Original strand, 27957771 - 27957872
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnntgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattta 117  Q
    |||||||| |||||||||||||||||||||||| |||         |||||||||||||| |||||||||||||||||| ||||||||||| ||||||||    
T  27957771 accaatatttttacaaagtgcatggaccaattctaaaaaaaaaaaatgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaaggcatattta 27957870  T
Q  118 aa 119  Q
    ||    
T  27957871 aa 27957872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 11692259 - 11692157
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| |||||||||||||||         ||||| ||||||||||||||||||||||||||| ||||||||||| |||||||    
T  11692259 accaatatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtagagaccaatgtcaaaatctgatgaaagtgcaaggactaaaggcatattt 11692160  T
Q  117 aaa 119  Q
    |||    
T  11692159 aaa 11692157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 18 - 120
Target Start/End: Complemental strand, 16732022 - 16731920
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnntgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattta 117  Q
    |||||||| |||||||||||||  ||||||||| ||||        |||||||||||||| |||||||||||||||||| ||||||||||| ||||||||    
T  16732022 accaatatttttacaaagtgcagagaccaattcaaaacaaaaaaaatgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaaggcatattta 16731923  T
Q  118 aat 120  Q
    |||    
T  16731922 aat 16731920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 44638517 - 44638415
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| |||||||||||||||||||||||||||||         |||||||||||||| ||||||||||| |||||| ||||||||||| |||||||    
T  44638517 accaatatttttacaaagtgcatggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgataaaagtgcaaggactaaaggcatattt 44638418  T
Q  117 aaa 119  Q
    |||    
T  44638417 aaa 44638415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 18 - 119
Target Start/End: Original strand, 47358465 - 47358567
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| |||||||||||||||         |||||||||||||| |||||||||||||||||| ||||||||||| |||||||    
T  47358465 accaatatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaaggcatattt 47358564  T
Q  117 aaa 119  Q
    |||    
T  47358565 aaa 47358567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 18 - 119
Target Start/End: Original strand, 52836864 - 52836965
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnntgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattta 117  Q
    |||||||| |||||||||||||  |||||||| |||||        |||||| ||||||||||||||||||| |||||||||||||||||| ||||||||    
T  52836864 accaatatttttacaaagtgcagagaccaatttcaaacaaaaaaaatgtaggaaccaatgtcaaaatctgataaaagtgtaaggactaaaggcatattta 52836963  T
Q  118 aa 119  Q
    ||    
T  52836964 aa 52836965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 18 - 118
Target Start/End: Complemental strand, 16222578 - 16222478
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnntgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattta 117  Q
    |||||||| ||||||||||||| |||||||||||||||        |||||||||||||| |||||| ||||||||||| | ||||||||| ||||||||    
T  16222578 accaatatttttacaaagtgcagggaccaattccaaacaaaaaaagtgtagggaccaatgccaaaatttgatgaaagtgcagggactaaaggcatattta 16222479  T
Q  118 a 118  Q
    |    
T  16222478 a 16222478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 18 - 119
Target Start/End: Original strand, 21561108 - 21561211
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn--tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatt 115  Q
    |||||||| ||||||||||||| |||||||||||||||          |||||||||||||| |||||||||||||||||| ||||||||||| ||||||    
T  21561108 accaatatttttacaaagtgcagggaccaattccaaacaaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaaggcatatt 21561207  T
Q  116 taaa 119  Q
    ||||    
T  21561208 taaa 21561211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 33092139 - 33092036
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn--tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatt 115  Q
    |||||||| ||||||||||||| |||||||||||||||          |||||||||||||| ||||| |||||||||||| ||||||||||||||||||    
T  33092139 accaatatttttacaaagtgcaaggaccaattccaaacaaaaaaaaagtgtagggaccaatgccaaaaactgatgaaagtgcaaggactaaagacatatt 33092040  T
Q  116 taaa 119  Q
    ||||    
T  33092039 taaa 33092036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 18 - 119
Target Start/End: Original strand, 49665604 - 49665707
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn--tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatt 115  Q
    |||||||| ||||||||||||| |||||||||||||||          ||||||| |||||| |||||||||||||||||| ||||||||||||||||||    
T  49665604 accaatatttttacaaagtgcagggaccaattccaaacaaaaaaaaagtgtaggggccaatgccaaaatctgatgaaagtgcaaggactaaagacatatt 49665703  T
Q  116 taaa 119  Q
    ||||    
T  49665704 taaa 49665707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 64 - 119
Target Start/End: Complemental strand, 29015775 - 29015720
Alignment:
Q  64 tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaa 119  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  29015775 tgtagggaccaatgtcaaaatctaatgaaagtgcaaggactaaagacatatttaaa 29015720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 21441072 - 21440970
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| |||||||||||||||         |||||||| ||||| |||||||||||||||||| ||||| |||||||||||||    
T  21441072 accaatatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtagggatcaatgccaaaatctgatgaaagtgcaaggattaaagacatattt 21440973  T
Q  117 aaa 119  Q
    |||    
T  21440972 aaa 21440970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 23461045 - 23460943
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| |||||||||||||||         |||||||||||||| ||||||||||| |||||| ||||||||||| |||||||    
T  23461045 accaatatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgataaaagtgcaaggactaaaggcatattt 23460946  T
Q  117 aaa 119  Q
    |||    
T  23460945 aaa 23460943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 18 - 119
Target Start/End: Original strand, 29352631 - 29352733
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| |||||||||||||  ||||||||||||||         |||||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  29352631 accaatatttttacaaagtgcagagaccaattccaaacaaaaaaaagtgtagggatcaatgccaaaatctgatgaaagtgcaaggactaaagacatattt 29352730  T
Q  117 aaa 119  Q
    |||    
T  29352731 aaa 29352733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 44398029 - 44397927
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| |||||||||||||||         |||||||||||||| |||||||||||||||||| ||||||||||  |||||||    
T  44398029 accaatatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaatgcatattt 44397930  T
Q  117 aaa 119  Q
    |||    
T  44397929 aaa 44397927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 18 - 119
Target Start/End: Original strand, 47982637 - 47982739
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||||||||||||| |||||         |||||||||||||| |||||| ||||||||||| ||||||||||| |||||||    
T  47982637 accaatatttttacaaagtgcatggaccaatttcaaacaaaaaaaagtgtagggaccaatgccaaaatatgatgaaagtgcaaggactaaaggcatattt 47982736  T
Q  117 aaa 119  Q
    |||    
T  47982737 aaa 47982739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 18 - 119
Target Start/End: Original strand, 47991924 - 47992026
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||||||||||||| |||||         |||||||||||||| |||||| ||||||||||| ||||||||||| |||||||    
T  47991924 accaatatttttacaaagtgcatggaccaatttcaaacaaaaaaaagtgtagggaccaatgccaaaatatgatgaaagtgcaaggactaaaggcatattt 47992023  T
Q  117 aaa 119  Q
    |||    
T  47992024 aaa 47992026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 18 - 119
Target Start/End: Original strand, 48001211 - 48001313
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||||||||||||| |||||         |||||||||||||| |||||| ||||||||||| ||||||||||| |||||||    
T  48001211 accaatatttttacaaagtgcatggaccaatttcaaacaaaaaaaagtgtagggaccaatgccaaaatatgatgaaagtgcaaggactaaaggcatattt 48001310  T
Q  117 aaa 119  Q
    |||    
T  48001311 aaa 48001313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 18 - 119
Target Start/End: Original strand, 48010498 - 48010600
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||||||||||||| |||||         |||||||||||||| |||||| ||||||||||| ||||||||||| |||||||    
T  48010498 accaatatttttacaaagtgcatggaccaatttcaaacaaaaaaaagtgtagggaccaatgccaaaatatgatgaaagtgcaaggactaaaggcatattt 48010597  T
Q  117 aaa 119  Q
    |||    
T  48010598 aaa 48010600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 18 - 118
Target Start/End: Complemental strand, 31705307 - 31705206
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| |||||||||||||||         |||| ||| |||||||||||||||||||||||| ||||||||||| |||||||    
T  31705307 accaatatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtatggatcaatgtcaaaatctgatgaaagtgcaaggactaaaggcatattt 31705208  T
Q  117 aa 118  Q
    ||    
T  31705207 aa 31705206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 20 - 124
Target Start/End: Original strand, 35565382 - 35565487
Alignment:
Q  20 caatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaa 118  Q
    |||||| ||||||||||||| ||||||||| |||||         |||| ||||||||| |||||||||||||||||| |||||||||||||||||||||    
T  35565382 caatatttttacaaagtgcagggaccaatttcaaacaaaaaaaagtgtatggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaa 35565481  T
Q  119 atctaa 124  Q
    | ||||    
T  35565482 acctaa 35565487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 18 - 119
Target Start/End: Original strand, 38443594 - 38443695
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnntgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattta 117  Q
    |||||||| ||||||||||||| |||||||||||||||        |||||||||||||  |||||||||||||||||| || |||||||  ||||||||    
T  38443594 accaatatttttacaaagtgcagggaccaattccaaacaaaaaaagtgtagggaccaataccaaaatctgatgaaagtgcaatgactaaatgcatattta 38443693  T
Q  118 aa 119  Q
    ||    
T  38443694 aa 38443695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 18 - 118
Target Start/End: Complemental strand, 40036750 - 40036649
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| |||| |||||||| |||||||||||||||         ||||||||||||| ||||||||| ||||||||| |||||||||||||||||||    
T  40036750 accaatatttttataaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatatcaaaatctaatgaaagtgcaaggactaaagacatattt 40036651  T
Q  117 aa 118  Q
    ||    
T  40036650 aa 40036649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 3017356 - 3017253
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgat-gaaagtgtaaggactaaagacatatt 115  Q
    |||||||| ||||||||||||| ||||||||| |||||         |||||||||||||| ||||||||||| ||||||| ||||||||||||||||||    
T  3017356 accaatatttttacaaagtgcagggaccaatttcaaacaaaaaaaagtgtagggaccaatgccaaaatctgatcgaaagtgcaaggactaaagacatatt 3017257  T
Q  116 taaa 119  Q
    ||||    
T  3017256 taaa 3017253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 20 - 118
Target Start/End: Complemental strand, 19987937 - 19987838
Alignment:
Q  20 caatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaa 118  Q
    |||||| ||||||||||||| ||||||||| |||||         |||||||||||||| |||||||||||||||||| | |||||||||||||||||||    
T  19987937 caatatttttacaaagtgcagggaccaatttcaaacaaaaaaacatgtagggaccaatgccaaaatctgatgaaagtgcagggactaaagacatatttaa 19987838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 119
Target Start/End: Original strand, 40393691 - 40393793
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||||||||||||| |||||         ||| |||||||||| ||||||||||| ||||||  ||||||||||||||||||    
T  40393691 accaatatttttacaaagtgcatggaccaatttcaaacaaaaaaaagtgttgggaccaatgccaaaatctgataaaagtgcgaggactaaagacatattt 40393790  T
Q  117 aaa 119  Q
    |||    
T  40393791 aaa 40393793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 115
Target Start/End: Complemental strand, 51753999 - 51753901
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatt 115  Q
    |||||||| ||||||||||||| || ||||||||||||         |||||||||||||  |||||||||||||||||| ||||||||||||||||||    
T  51753999 accaatatttttacaaagtgcaggggccaattccaaacaaaaaaaagtgtagggaccaataccaaaatctgatgaaagtgcaaggactaaagacatatt 51753901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 67 - 119
Target Start/End: Original strand, 54090168 - 54090220
Alignment:
Q  67 agggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaa 119  Q
    ||||||||||| |||||||| ||||||||| ||||||||||||||||||||||    
T  54090168 agggaccaatgccaaaatctaatgaaagtgcaaggactaaagacatatttaaa 54090220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 64 - 130
Target Start/End: Original strand, 34682637 - 34682703
Alignment:
Q  64 tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaatctaatttaaa 130  Q
    |||||||| ||||| ||||||||||| ||| || |||||||||||||||||||||| | ||||||||    
T  34682637 tgtagggatcaatgccaaaatctgataaaaatgcaaggactaaagacatatttaaaccaaatttaaa 34682703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 54803138 - 54803031
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaac-nnnnnnnntgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| |||||||||||||||||||||||||||||         || |||||||||||  |||||||||| ||| || |||||| |||| |||||||    
T  54803138 accaatatttttacaaagtgcatggaccaattccaaacaaaaaaaagtggagggaccaatgcaaaaatctgataaaaatgcaaggaccaaaggcatattt 54803039  T
Q  117 aaatctaa 124  Q
    ||| ||||    
T  54803038 aaacctaa 54803031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 70 - 132
Target Start/End: Complemental strand, 26050548 - 26050486
Alignment:
Q  70 gaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaatctaatttaaata 132  Q
    |||||||| ||||||||||||||||| || |||| || |||| ||||||||||| ||||||||    
T  26050548 gaccaatgccaaaatctgatgaaagtttagggaccaatgacacatttaaatctattttaaata 26050486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 35565145 - 35565044
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnntgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattta 117  Q
    |||||||| ||||||||||||| |||||||| ||||          || ||||||||||| |||||||||||||||||||| |||| || |||| |||||    
T  35565145 accaatatttttacaaagtgcagggaccaatgccaacaaaaaaaaatgcagggaccaatgccaaaatctgatgaaagtgtagggaccaatgacacattta 35565046  T
Q  118 aa 119  Q
    ||    
T  35565045 aa 35565044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 70 - 119
Target Start/End: Original strand, 55328800 - 55328849
Alignment:
Q  70 gaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaa 119  Q
    ||||||||||||||||||||||||||| | ||||||| |||| |||||||    
T  55328800 gaccaatgtcaaaatctgatgaaagtgcagggactaatgacacatttaaa 55328849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 67 - 119
Target Start/End: Original strand, 16222836 - 16222888
Alignment:
Q  67 agggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaa 119  Q
    ||||||||||| |||||||||||||||||||| |||| || |||| |||||||    
T  16222836 agggaccaatgccaaaatctgatgaaagtgtagggaccaatgacacatttaaa 16222888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 67 - 119
Target Start/End: Original strand, 23461190 - 23461242
Alignment:
Q  67 agggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaa 119  Q
    ||||||||||| |||||||||||||||||||| |||| || |||| |||||||    
T  23461190 agggaccaatgccaaaatctgatgaaagtgtagggaccaatgacacatttaaa 23461242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 64 - 119
Target Start/End: Original strand, 44638620 - 44638675
Alignment:
Q  64 tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaa 119  Q
    |||||||||||||| |||||||||||||||||| | |||| || |||| |||||||    
T  44638620 tgtagggaccaatgccaaaatctgatgaaagtgcagggaccaatgacacatttaaa 44638675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 124
Target Start/End: Original strand, 51754206 - 51754313
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| |||||||| ||||||         || ||||||||||| |||||||||||||||||| | |||| || |||| ||||    
T  51754206 accaatatttttacaaagtgcagggaccaatgccaaacaaaaaaaagtgcagggaccaatgccaaaatctgatgaaagtgcagggaccaatgacacattt 51754305  T
Q  117 aaatctaa 124  Q
    ||| ||||    
T  51754306 aaacctaa 51754313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 47358254 - 47358152
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnnt-gtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| |||||||| ||||||        | | ||||||||||| |||||||||||||||||| | |||| || |||| ||||    
T  47358254 accaatatttttacaaagtgcagggaccaatgccaaacaaaaaaaattgcagggaccaatgccaaaatctgatgaaagtgcagggaccaatgacacattt 47358155  T
Q  117 aaa 119  Q
    |||    
T  47358154 aaa 47358152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 71 - 119
Target Start/End: Original strand, 31705462 - 31705510
Alignment:
Q  71 accaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaa 119  Q
    |||||||||||||||||||||||||| | |||| || |||| |||||||    
T  31705462 accaatgtcaaaatctgatgaaagtgcagggaccaatgacacatttaaa 31705510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 62; Significance: 1e-26; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 18 - 119
Target Start/End: Original strand, 2937087 - 2937188
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnntgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattta 117  Q
    |||||||| ||||||||||||| |||||||||||||||        |||||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  2937087 accaatatttttacaaagtgcagggaccaattccaaacaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatattta 2937186  T
Q  118 aa 119  Q
    ||    
T  2937187 aa 2937188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 18 - 119
Target Start/End: Original strand, 1342742 - 1342844
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| |||||||||||||||         |||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  1342742 accaatatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgtaaggactaaagacatattt 1342841  T
Q  117 aaa 119  Q
    |||    
T  1342842 aaa 1342844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 18 - 123
Target Start/End: Original strand, 38019274 - 38019380
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| ||||||||| |||||         ||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  38019274 accaatatttttacaaagtgcagggaccaatttcaaacaaaaaaatgtgtagggaccaatgtcaaaatctgatgaaagtgcaaggactaaagacatattt 38019373  T
Q  117 aaatcta 123  Q
    |||||||    
T  38019374 aaatcta 38019380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 5132530 - 5132428
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| |||||||||||||||         |||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  5132530 accaatatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatattt 5132431  T
Q  117 aaa 119  Q
    |||    
T  5132430 aaa 5132428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 28486724 - 28486622
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| |||||||||||||||         |||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  28486724 accaatatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatattt 28486625  T
Q  117 aaa 119  Q
    |||    
T  28486624 aaa 28486622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 38872614 - 38872507
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| |||||||||||||||         |||||||||||||| |||||||||||||||||| ||||||||||| |||||||    
T  38872614 accaatatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagtcatattt 38872515  T
Q  117 aaatctaa 124  Q
    ||| ||||    
T  38872514 aaacctaa 38872507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 18 - 119
Target Start/End: Original strand, 23253635 - 23253737
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnnt-gtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| |||||||||||||||        | ||||||||||||| |||||||||||||||||| ||||||||||| |||||||    
T  23253635 accaatatttttacaaagtgcagggaccaattccaaacaaaaaaaattgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaaggcatattt 23253734  T
Q  117 aaa 119  Q
    |||    
T  23253735 aaa 23253737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 18 - 119
Target Start/End: Original strand, 50755969 - 50756071
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnnt-gtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| |||||||||||||||        | ||||||||||||| |||||||||||||||||| ||||||||||| |||||||    
T  50755969 accaatatttttacaaagtgcagggaccaattccaaacaaaaaaaattgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaaggcatattt 50756068  T
Q  117 aaa 119  Q
    |||    
T  50756069 aaa 50756071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 1366407 - 1366299
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn--tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatt 115  Q
    |||||||| ||||||||||||| |||||||||||||||          |||||||||||||| |||||||||||||||||| ||||||||||| ||||||    
T  1366407 accaatatttttacaaagtgcagggaccaattccaaacaaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaaggcatatt 1366308  T
Q  116 taaatctaa 124  Q
    |||| ||||    
T  1366307 taaacctaa 1366299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 18 - 126
Target Start/End: Complemental strand, 28838205 - 28838096
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| | |||||||||||||         |||||||||||||| |||||||||||||||||| |||||||||||| ||||||    
T  28838205 accaatatttttacaaagtgcaggaaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagagatattt 28838106  T
Q  117 aaatctaatt 126  Q
    ||| ||||||    
T  28838105 aaacctaatt 28838096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 64 - 125
Target Start/End: Original strand, 36466292 - 36466353
Alignment:
Q  64 tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaatctaat 125  Q
    |||||||||||||| |||||||||||||||||| ||||||||||| ||||||||||||||||    
T  36466292 tgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaaggcatatttaaatctaat 36466353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 18 - 119
Target Start/End: Original strand, 17077637 - 17077740
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn--tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatt 115  Q
    |||||||| |||||||||||||  ||||||||||||||          ||||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  17077637 accaatatttttacaaagtgcagagaccaattccaaacaaaaaaaaagtgtagggaccaatgtcaaaatctgatgaaagtgcaaggactaaaggcatatt 17077736  T
Q  116 taaa 119  Q
    ||||    
T  17077737 taaa 17077740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 64 - 124
Target Start/End: Original strand, 44396398 - 44396458
Alignment:
Q  64 tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaatctaa 124  Q
    |||||||||||||| |||||||||||||||||| |||||||||||||||||||||| ||||    
T  44396398 tgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaacctaa 44396458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 18 - 124
Target Start/End: Original strand, 47648166 - 47648273
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| |||||||||| || |||||||||||||||         |||||||||||||| |||||||||||||||||| ||||||||||| |||||||    
T  47648166 accaatatttttacaaagtacagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaaggcatattt 47648265  T
Q  117 aaatctaa 124  Q
    ||| ||||    
T  47648266 aaacctaa 47648273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 6782670 - 6782568
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| ||| |||||||||||         |||||||||||||| |||||||||||||||||| ||||||||||| |||||||    
T  6782670 accaatatttttacaaagtgcagggatcaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaaggcatattt 6782571  T
Q  117 aaa 119  Q
    |||    
T  6782570 aaa 6782568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 37351044 - 37350942
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| |||||||||||||||         |||||||||||||| |||||||||||||||||| ||||| ||||| |||||||    
T  37351044 accaatatttttacaaagtgcagggaccaattccaaacaaaaaaaaatgtagggaccaatgccaaaatctgatgaaagtgcaaggattaaaggcatattt 37350945  T
Q  117 aaa 119  Q
    |||    
T  37350944 aaa 37350942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 18 - 119
Target Start/End: Original strand, 47672253 - 47672355
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| |||||||||||||||         |||||||||||||  |||||||||||||||||| ||||||||||| |||||||    
T  47672253 accaatatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaataccaaaatctgatgaaagtgcaaggactaaaggcatattt 47672352  T
Q  117 aaa 119  Q
    |||    
T  47672353 aaa 47672355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 18 - 119
Target Start/End: Original strand, 44519649 - 44519750
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnntgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattta 117  Q
    |||||||| ||||||||||||| ||||||||| ||||         |||||||||||||  |||||||||||||||||| ||||| ||||||||||||||    
T  44519649 accaatatttttacaaagtgcagggaccaattacaaaaaaaaaaagtgtagggaccaataccaaaatctgatgaaagtgcaaggattaaagacatattta 44519748  T
Q  118 aa 119  Q
    ||    
T  44519749 aa 44519750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 18 - 119
Target Start/End: Original strand, 2731016 - 2731119
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn--tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatt 115  Q
    |||||||| |||||||| |||| |||||||||||||||          |||||||||||||  |||||||||||||||||| ||||||||||||||||||    
T  2731016 accaatatttttacaaaatgcagggaccaattccaaacaaaaaaaaagtgtagggaccaataccaaaatctgatgaaagtgcaaggactaaagacatatt 2731115  T
Q  116 taaa 119  Q
    ||||    
T  2731116 taaa 2731119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 64 - 119
Target Start/End: Original strand, 5905089 - 5905144
Alignment:
Q  64 tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaa 119  Q
    |||||||||||||| |||||||||||||||||| |||||||||| |||||||||||    
T  5905089 tgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaaaacatatttaaa 5905144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 20 - 119
Target Start/End: Complemental strand, 32005568 - 32005470
Alignment:
Q  20 caatatatttacaaagtgcatggaccaattccaaacnnnnnnnntgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaa 119  Q
    |||||| ||||||||||||| ||||||||| |||||        |||| |||||||||  ||||||||||||||||| ||||||||||||||||||||||    
T  32005568 caatatttttacaaagtgcagggaccaatttcaaacaaaaaaagtgtaaggaccaatgctaaaatctgatgaaagtg-aaggactaaagacatatttaaa 32005470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 64 - 119
Target Start/End: Complemental strand, 39950289 - 39950234
Alignment:
Q  64 tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaa 119  Q
    |||||||||||||  ||||||||||||||||||||| |||||||||||||||||||    
T  39950289 tgtagggaccaataccaaaatctgatgaaagtgtaaagactaaagacatatttaaa 39950234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 119
Target Start/End: Original strand, 32487171 - 32487273
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| |||||||| |||| |||||||||||||||         |||||||||||||| |||||||||||||||||| | ||||||||| |||||||    
T  32487171 accaatatttttacaaattgcagggaccaattccaaacaaaaataagtgtagggaccaatgccaaaatctgatgaaagtgcagggactaaaggcatattt 32487270  T
Q  117 aaa 119  Q
    |||    
T  32487271 aaa 32487273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 66 - 119
Target Start/End: Complemental strand, 29548636 - 29548583
Alignment:
Q  66 tagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaa 119  Q
    |||||||||||| |||||||||||||||||| ||||||||||| ||||||||||    
T  29548636 tagggaccaatgccaaaatctgatgaaagtgcaaggactaaaggcatatttaaa 29548583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 18 - 124
Target Start/End: Original strand, 49628400 - 49628508
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn--tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatt 115  Q
    |||||||| ||||||||||||| |||| ||||||||||          |||||||||||||| |||||||| ||||||||| |||||||||||| |||||    
T  49628400 accaatatttttacaaagtgcagggactaattccaaacaaaaaaaaagtgtagggaccaatgccaaaatctaatgaaagtgcaaggactaaagagatatt 49628499  T
Q  116 taaatctaa 124  Q
    |||| ||||    
T  49628500 taaacctaa 49628508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 66 - 118
Target Start/End: Original strand, 4487039 - 4487091
Alignment:
Q  66 tagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaa 118  Q
    ||||||||||||| ||||||||||||||||| ||||| |||||||||||||||    
T  4487039 tagggaccaatgtaaaaatctgatgaaagtgcaaggagtaaagacatatttaa 4487091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 67 - 119
Target Start/End: Complemental strand, 25378742 - 25378690
Alignment:
Q  67 agggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaa 119  Q
    ||||||||||| |||||||||||||||||| || |||||||||||||||||||    
T  25378742 agggaccaatgccaaaatctgatgaaagtgcaaagactaaagacatatttaaa 25378690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 38717431 - 38717328
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn--tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatt 115  Q
    |||||||| ||||||||||||| |||||||||||||||          ||||||||||||||  ||||||||||||||||  ||||||||||| ||||||    
T  38717431 accaatatttttacaaagtgcagggaccaattccaaacaaaaaaaaagtgtagggaccaatgctaaaatctgatgaaagtacaaggactaaaggcatatt 38717332  T
Q  116 taaa 119  Q
    ||||    
T  38717331 taaa 38717328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 64 - 119
Target Start/End: Original strand, 40125139 - 40125194
Alignment:
Q  64 tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaa 119  Q
    |||||||||||||| |||||||||||||||||| | ||||||||| ||||||||||    
T  40125139 tgtagggaccaatgccaaaatctgatgaaagtgcagggactaaaggcatatttaaa 40125194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 14291355 - 14291253
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| ||| |||||||||||         ||||||||||||| ||||||||| ||||||||| ||||||||||  |||||||    
T  14291355 accaatatttttacaaagtgcagggatcaattccaaacaaaaaaaagtgtagggaccaatatcaaaatctaatgaaagtgcaaggactaaatgcatattt 14291256  T
Q  117 aaa 119  Q
    |||    
T  14291255 aaa 14291253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 18 - 119
Target Start/End: Original strand, 45951214 - 45951316
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| |||||||||||||||         |||||| ||||||| |||||||||||||||||| || |||||||| | |||||    
T  45951214 accaatatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtaggaaccaatgccaaaatctgatgaaagtgcaaagactaaaggcgtattt 45951313  T
Q  117 aaa 119  Q
    |||    
T  45951314 aaa 45951316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 18 - 118
Target Start/End: Original strand, 14556322 - 14556423
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| ||| |||||||||||         ||||||||| |||| |||||||||||||||||| | |||||||||| ||||||    
T  14556322 accaatatttttacaaagtgcagggatcaattccaaacaaaaaaaagtgtagggacaaatgccaaaatctgatgaaagtgcagggactaaagatatattt 14556421  T
Q  117 aa 118  Q
    ||    
T  14556422 aa 14556423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 18 - 119
Target Start/End: Original strand, 30057238 - 30057339
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnntgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattta 117  Q
    |||||||| |||||||||||||  || |||||||||||        |  ||||||||||| |||||||||||||||||| || |||||||| ||||||||    
T  30057238 accaatatttttacaaagtgcagagatcaattccaaacaaaaaaaattgagggaccaatgccaaaatctgatgaaagtgcaatgactaaaggcatattta 30057337  T
Q  118 aa 119  Q
    ||    
T  30057338 aa 30057339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 18 - 118
Target Start/End: Original strand, 36302737 - 36302838
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| |||||||||| || |||||||||||||||         |||||| ||||||| |||||||||||||||||| | ||||||||| |||||||    
T  36302737 accaatatttttacaaagtacaaggaccaattccaaacaaaaaaaaatgtaggaaccaatgccaaaatctgatgaaagtgcagggactaaaggcatattt 36302836  T
Q  117 aa 118  Q
    ||    
T  36302837 aa 36302838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 18 - 121
Target Start/End: Complemental strand, 14556119 - 14556016
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnntgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattta 117  Q
    |||||||| |||||||||| || |||||||| ||||||        || ||||| |||||||||||||||||||||||| | |||| || |||| |||||    
T  14556119 accaatatttttacaaagtacaaggaccaatgccaaacaaaaaaagtgcagggatcaatgtcaaaatctgatgaaagtgcagggaccaatgacacattta 14556020  T
Q  118 aatc 121  Q
    ||||    
T  14556019 aatc 14556016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 119
Target Start/End: Original strand, 5132640 - 5132742
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| |||||||| ||||||         || |||||||||||||||||||||||||||||| | |||| || |||| ||||    
T  5132640 accaatatttttacaaagtgcagggaccaatgccaaacaaaaaaaagtgcagggaccaatgtcaaaatctgatgaaagtgcagggaccaatgacacattt 5132739  T
Q  117 aaa 119  Q
    |||    
T  5132740 aaa 5132742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 64 - 118
Target Start/End: Original strand, 7838964 - 7839018
Alignment:
Q  64 tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaa 118  Q
    ||||| |||||||| ||||||||||||||||| ||  ||||||||||||||||||    
T  7838964 tgtagagaccaatgccaaaatctgatgaaagtttatagactaaagacatatttaa 7839018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 64 - 118
Target Start/End: Original strand, 29721442 - 29721496
Alignment:
Q  64 tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaa 118  Q
    |||||| ||||||| |||||||||||||||||| | |||||| ||||||||||||    
T  29721442 tgtaggaaccaatgccaaaatctgatgaaagtgcagggactagagacatatttaa 29721496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 49628230 - 49628129
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnntgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattta 117  Q
    |||||||| ||||||||||||| ||||||||  |||||        || |||||| |||| |||||||||||||||||| | |||| || ||||||||||    
T  49628230 accaatatttttacaaagtgcagggaccaatgtcaaacaaaaaaagtgcagggactaatgccaaaatctgatgaaagtgcagggaccaatgacatattta 49628131  T
Q  118 aa 119  Q
    ||    
T  49628130 aa 49628129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 52346494 - 52346531
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaac 55  Q
    |||||||| |||||||||||||||||||||||||||||    
T  52346494 accaatatttttacaaagtgcatggaccaattccaaac 52346531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 67 - 119
Target Start/End: Original strand, 6782920 - 6782972
Alignment:
Q  67 agggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaa 119  Q
    ||||||||||| |||||||||||||||||| |||||| || |||| |||||||    
T  6782920 agggaccaatgccaaaatctgatgaaagtgcaaggaccaatgacacatttaaa 6782972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 67 - 119
Target Start/End: Complemental strand, 32486913 - 32486861
Alignment:
Q  67 agggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaa 119  Q
    ||||||||||| |||||||||||||||||| | ||||||| |||| |||||||    
T  32486913 agggaccaatgccaaaatctgatgaaagtgcagggactaatgacacatttaaa 32486861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 67 - 119
Target Start/End: Original strand, 38872868 - 38872920
Alignment:
Q  67 agggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaa 119  Q
    |||||||||||||||||||||||||||||| | |||| || |||| |||||||    
T  38872868 agggaccaatgtcaaaatctgatgaaagtgcagggaccaatgacacatttaaa 38872920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 64 - 119
Target Start/End: Original strand, 29715742 - 29715797
Alignment:
Q  64 tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaa 119  Q
    ||||| ||| ||||||||||||||||||||||| | ||||||||| |||| |||||    
T  29715742 tgtagagactaatgtcaaaatctgatgaaagtgcagggactaaaggcatagttaaa 29715797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 17077430 - 17077328
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| |||||||| ||||||         || ||||||||||| |||||| ||||||||||| |||||| || |||| ||||    
T  17077430 accaatatttttacaaagtgcagggaccaatgccaaacaaaaaaaagtgcagggaccaatgccaaaatatgatgaaagtgcaaggaccaatgacacattt 17077331  T
Q  117 aaa 119  Q
    |||    
T  17077330 aaa 17077328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 23253429 - 23253327
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| |||||||||||||||||| ||| ||||||         || ||||||||||| |||||||||||||||||  |||||| || |||| ||||    
T  23253429 accaatatttttacaaagtgcatggactaatgccaaacaaaaaaaagtgcagggaccaatgccaaaatctgatgaaagttgaaggaccaatgacacattt 23253330  T
Q  117 aaa 119  Q
    |||    
T  23253329 aaa 23253327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 36466040 - 36465938
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| |||||||| ||||||         || |||||||||| ||||||||||||||||||| | |||| || |||| ||||    
T  36466040 accaatatttttacaaagtgcagggaccaatgccaaacaaaaaaaagtgcagggaccaatttcaaaatctgatgaaagtgcagggaccaatgacacattt 36465941  T
Q  117 aaa 119  Q
    |||    
T  36465940 aaa 36465938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 40124885 - 40124783
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| |||||||| ||||||         || ||||| |||||||||||| ||||||||||||| |||| || |||| ||||    
T  40124885 accaatatttttacaaagtgcagggaccaatgccaaacaaaaaaaagtgcagggatcaatgtcaaaatttgatgaaagtgtagggaccaatgacacattt 40124786  T
Q  117 aaa 119  Q
    |||    
T  40124785 aaa 40124783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 5904918 - 5904881
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaac 55  Q
    |||||||| |||||||||||||||||||||| ||||||    
T  5904918 accaatatttttacaaagtgcatggaccaatgccaaac 5904881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 30057032 - 30056952
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn--tgtagggaccaatgtcaaaatctgatgaaagtg 96  Q
    |||||||| ||||||||||||| |||||||| ||||||          |||||||||||||| ||||||||||||||||||    
T  30057032 accaatatttttacaaagtgcaaggaccaatgccaaacaaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtg 30056952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 67 - 119
Target Start/End: Complemental strand, 1342486 - 1342434
Alignment:
Q  67 agggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaa 119  Q
    ||||||||||| |||||||||||||||||| | |||| || |||| |||||||    
T  1342486 agggaccaatgccaaaatctgatgaaagtgcagggaccaatgacacatttaaa 1342434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 67 - 119
Target Start/End: Original strand, 1366632 - 1366684
Alignment:
Q  67 agggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaa 119  Q
    ||||||||||| |||||||||||||||||| | |||| || |||| |||||||    
T  1366632 agggaccaatgccaaaatctgatgaaagtgcagggaccaatgacacatttaaa 1366684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 67 - 119
Target Start/End: Complemental strand, 39524323 - 39524271
Alignment:
Q  67 agggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaa 119  Q
    ||||||||||| |||||||||||||||||| | |||| || |||| |||||||    
T  39524323 agggaccaatgccaaaatctgatgaaagtgcagggaccaatgacacatttaaa 39524271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 67 - 119
Target Start/End: Complemental strand, 45950957 - 45950905
Alignment:
Q  67 agggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaa 119  Q
    ||||||||||| |||||||||||||||||| | |||| || |||| |||||||    
T  45950957 agggaccaatgccaaaatctgatgaaagtgcagggaccaatgacacatttaaa 45950905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 67 - 119
Target Start/End: Complemental strand, 52346283 - 52346231
Alignment:
Q  67 agggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaa 119  Q
    ||||||||||| |||||||||||||||||| | |||| ||  |||||||||||    
T  52346283 agggaccaatgccaaaatctgatgaaagtgcatggaccaataacatatttaaa 52346231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 58; Significance: 3e-24; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 2705266 - 2705165
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnntgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattta 117  Q
    |||||||| |||||||||||||||||||||||||||||        | |||||||||||  |||||||||||||||||| ||||||||||||||||||||    
T  2705266 accaatatttttacaaagtgcatggaccaattccaaacaaaaaaagtatagggaccaataccaaaatctgatgaaagtgcaaggactaaagacatattta 2705167  T
Q  118 aa 119  Q
    ||    
T  2705166 aa 2705165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 32924003 - 32924102
Alignment:
Q  19 ccaatatatttacaaagtgcatggaccaattccaaacnnnnnnnntgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaa 118  Q
    ||||||| ||||||||||||||||| |||||||||||        ||||||||||||||||||||||||||||||||| | ||||||||| |||||||||    
T  32924003 ccaatatttttacaaagtgcatggatcaattccaaacaaaagaagtgtagggaccaatgtcaaaatctgatgaaagtgcagggactaaaggcatatttaa 32924102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 37405976 - 37405875
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnntgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattta 117  Q
    |||||||| ||||||||||||| ||||||||||||||         |||||||||||||| |||||||||||||||||||||| ||||||| ||||||||    
T  37405976 accaatatttttacaaagtgcaaggaccaattccaaaaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgtaagaactaaaggcatattta 37405877  T
Q  118 aa 119  Q
    ||    
T  37405876 aa 37405875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 18 - 119
Target Start/End: Original strand, 10495999 - 10496101
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| ||| |||||||||||         |||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  10495999 accaatatttttacaaagtgcagggaacaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatattt 10496098  T
Q  117 aaa 119  Q
    |||    
T  10496099 aaa 10496101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 18 - 119
Target Start/End: Original strand, 27696976 - 27697078
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| |||||||||||||||         |||||||||||||| ||||||||||||||| || |||||||||||||||||||    
T  27696976 accaatatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaaatgcaaggactaaagacatattt 27697075  T
Q  117 aaa 119  Q
    |||    
T  27697076 aaa 27697078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 34181258 - 34181156
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| |||||||||||||||         |||||||||||||||||||||||||||||||||  ||||||||||| ||||||    
T  34181258 accaatatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgtcaaaatctgatgaaagtgcgaggactaaagaaatattt 34181159  T
Q  117 aaa 119  Q
    |||    
T  34181158 aaa 34181156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 20 - 119
Target Start/End: Original strand, 2232934 - 2233033
Alignment:
Q  20 caatatatttacaaagtgcatggaccaattccaaacnnnnnnnntgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaa 119  Q
    |||||| |||||||||||||  ||||||||||||||        |||||||||||||| ||||| || ||||||||| ||||||||||||||||||||||    
T  2232934 caatatttttacaaagtgcagagaccaattccaaacaaaaaatgtgtagggaccaatgccaaaagctaatgaaagtgcaaggactaaagacatatttaaa 2233033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 64 - 119
Target Start/End: Complemental strand, 4528698 - 4528643
Alignment:
Q  64 tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaa 119  Q
    |||||||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  4528698 tgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaa 4528643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 7050573 - 7050466
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| ||||||||| |||||         |||||||||||||| |||||||||||||||||| ||||||||||| |||||||    
T  7050573 accaatatttttacaaagtgcagggaccaatttcaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaaggcatattt 7050474  T
Q  117 aaatctaa 124  Q
    ||| ||||    
T  7050473 aaacctaa 7050466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 18 - 119
Target Start/End: Original strand, 30795087 - 30795189
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| |||||||||||||||         |||||||  ||||| |||||||||||||||||| |||||||||||||||||||    
T  30795087 accaatatttttacaaagtgcaaggaccaattccaaacaaaaaaaagtgtaggggtcaatgccaaaatctgatgaaagtgcaaggactaaagacatattt 30795186  T
Q  117 aaa 119  Q
    |||    
T  30795187 aaa 30795189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 18 - 119
Target Start/End: Original strand, 10837477 - 10837580
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn--tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatt 115  Q
    |||||||| ||||||||||||| ||||||||| |||||          |||||||||||||| ||||||||||| |||||| ||||||||||||||||||    
T  10837477 accaatatttttacaaagtgcagggaccaatttcaaacaaaaaaaaagtgtagggaccaatgccaaaatctgataaaagtgcaaggactaaagacatatt 10837576  T
Q  116 taaa 119  Q
    ||||    
T  10837577 taaa 10837580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 64 - 119
Target Start/End: Original strand, 17696957 - 17697012
Alignment:
Q  64 tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaa 119  Q
    |||| ||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  17696957 tgtatggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaa 17697012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 21 - 119
Target Start/End: Original strand, 43857767 - 43857866
Alignment:
Q  21 aatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaa 119  Q
    ||||| ||||||||||||| |||||||||||||||         |||||||||||||| |||||||||||||||||| ||||||||||  ||||||||||    
T  43857767 aatatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaatgcatatttaaa 43857866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 64 - 118
Target Start/End: Original strand, 9855663 - 9855717
Alignment:
Q  64 tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaa 118  Q
    |||||||||||||| |||||||||||||||||| | |||||||||||||||||||    
T  9855663 tgtagggaccaatgccaaaatctgatgaaagtgcagggactaaagacatatttaa 9855717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 119
Target Start/End: Original strand, 32539084 - 32539186
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||||||| |||||||||||         ||| || ||||||  |||||||||||||||||| |||||||||||||||||||    
T  32539084 accaatatttttacaaagtgcatggatcaattccaaacaaaaaaaagtgttggaaccaataccaaaatctgatgaaagtgcaaggactaaagacatattt 32539183  T
Q  117 aaa 119  Q
    |||    
T  32539184 aaa 32539186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 18 - 118
Target Start/End: Complemental strand, 26695512 - 26695411
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||| | |||||||||||||||         |||||||||||||| |||||| ||||||||||| | |||||||||||||||||    
T  26695512 accaatatttttacaaagtgtagggaccaattccaaacaaaataaagtgtagggaccaatgccaaaatatgatgaaagtggatggactaaagacatattt 26695413  T
Q  117 aa 118  Q
    ||    
T  26695412 aa 26695411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 10837269 - 10837163
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnntgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattta 117  Q
    |||||||| ||||||||||||| |||||||| ||||||        || ||||||||||| |||||||||||||||||| | |||| || |||| |||||    
T  10837269 accaatatttttacaaagtgcagggaccaatgccaaacaaaaaaagtgcagggaccaatgccaaaatctgatgaaagtgcagggaccaatgacacattta 10837170  T
Q  118 aatctaa 124  Q
    || ||||    
T  10837169 aacctaa 10837163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 64 - 118
Target Start/End: Complemental strand, 42686080 - 42686026
Alignment:
Q  64 tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaa 118  Q
    ||||||||||||||||||||||||||||||||| |  |||||| |||||||||||    
T  42686080 tgtagggaccaatgtcaaaatctgatgaaagtgcagagactaatgacatatttaa 42686026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 64 - 119
Target Start/End: Original strand, 2057080 - 2057135
Alignment:
Q  64 tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaa 119  Q
    |||||||||||||| ||||||||||||||| || |||||||||||  |||||||||    
T  2057080 tgtagggaccaatgccaaaatctgatgaaaatgcaaggactaaaggtatatttaaa 2057135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 10495826 - 10495724
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| |||||||| ||||||         || |||||||||||||||||||||||||||||| | |||  || |||||||||    
T  10495826 accaatatttttacaaagtgcagggaccaatgccaaacaaaaaaaagtgcagggaccaatgtcaaaatctgatgaaagtgcagggatcaatgacatattt 10495727  T
Q  117 aaa 119  Q
    |||    
T  10495726 aaa 10495724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 70 - 124
Target Start/End: Original strand, 41441636 - 41441690
Alignment:
Q  70 gaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaatctaa 124  Q
    |||||||  |||||||| ||||||||| |||||||||||||||||||||| ||||    
T  41441636 gaccaataccaaaatctcatgaaagtgcaaggactaaagacatatttaaacctaa 41441690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 67 - 124
Target Start/End: Complemental strand, 2232786 - 2232729
Alignment:
Q  67 agggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaatctaa 124  Q
    |||||||||||||||||||||||||||||| | |||| || |||| ||||||| ||||    
T  2232786 agggaccaatgtcaaaatctgatgaaagtgcagggaccaatgacacatttaaacctaa 2232729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 67 - 119
Target Start/End: Original strand, 4528975 - 4529027
Alignment:
Q  67 agggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaa 119  Q
    |||||||||||||||||||||||||||||| | |||| || |||| |||||||    
T  4528975 agggaccaatgtcaaaatctgatgaaagtgcagggaccaatgacacatttaaa 4529027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 67 - 119
Target Start/End: Complemental strand, 17696664 - 17696612
Alignment:
Q  67 agggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaa 119  Q
    |||||||||||||||||||||||||||||| | |||| || |||| |||||||    
T  17696664 agggaccaatgtcaaaatctgatgaaagtgcagggaccaatgacacatttaaa 17696612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 67 - 134
Target Start/End: Complemental strand, 30794861 - 30794794
Alignment:
Q  67 agggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaatctaatttaaatatt 134  Q
    ||||||||||| |||||||||||||||||| | |||| || |||| ||||||| ||||| | ||||||    
T  30794861 agggaccaatgccaaaatctgatgaaagtgcagggaccaatgacacatttaaacctaatatgaatatt 30794794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 64 - 119
Target Start/End: Complemental strand, 42216312 - 42216257
Alignment:
Q  64 tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaa 119  Q
    |||||| ||||||| |||||| |||| |||||| ||||| ||||||||||||||||    
T  42216312 tgtaggaaccaatgccaaaatatgataaaagtgcaaggattaaagacatatttaaa 42216257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 64 - 118
Target Start/End: Complemental strand, 7230025 - 7229971
Alignment:
Q  64 tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaa 118  Q
    |||||||| ||||  ||||||||||| |||||| | |||||||||||||||||||    
T  7230025 tgtagggatcaataccaaaatctgataaaagtgcagggactaaagacatatttaa 7229971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 67 - 125
Target Start/End: Complemental strand, 41441468 - 41441410
Alignment:
Q  67 agggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaatctaat 125  Q
    ||||||||||| |||||||||||||||||| | |||| || |||| ||||||| |||||    
T  41441468 agggaccaatgccaaaatctgatgaaagtgcagggaccaatgacacatttaaacctaat 41441410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 67 - 119
Target Start/End: Original strand, 7050884 - 7050936
Alignment:
Q  67 agggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaa 119  Q
    ||||||||||| |||||||||||||||||| | |||| || |||| |||||||    
T  7050884 agggaccaatgccaaaatctgatgaaagtgcagggaccaatgacacatttaaa 7050936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 67 - 119
Target Start/End: Complemental strand, 27696750 - 27696698
Alignment:
Q  67 agggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaa 119  Q
    ||||||||||| |||||||||||||||||| | |||| || |||| |||||||    
T  27696750 agggaccaatgccaaaatctgatgaaagtgcagggaccaatgacacatttaaa 27696698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 67 - 119
Target Start/End: Original strand, 34181491 - 34181543
Alignment:
Q  67 agggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaa 119  Q
    ||||||||||| |||||||||||||||||| | |||| || |||| |||||||    
T  34181491 agggaccaatgccaaaatctgatgaaagtgcagggaccaatgacacatttaaa 34181543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 3e-24; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 18 - 130
Target Start/End: Complemental strand, 21002872 - 21002759
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||||||| |||||||||||         |||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  21002872 accaatatttttacaaagtgcatggatcaattccaaacaaaaaaatgtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatattt 21002773  T
Q  117 aaatctaatttaaa 130  Q
    ||| | ||||||||    
T  21002772 aaaccaaatttaaa 21002759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 20 - 119
Target Start/End: Original strand, 9566355 - 9566455
Alignment:
Q  20 caatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaa 118  Q
    |||||| |||||||||||||||||| ||||||||||         ||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  9566355 caatatttttacaaagtgcatggacaaattccaaacaaaaaaaagtgtagggaccaatgtcaaaatctgatgaaagtgcaaggactaaagacatatttaa 9566454  T
Q  119 a 119  Q
    |    
T  9566455 a 9566455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 18 - 119
Target Start/End: Original strand, 10143522 - 10143624
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| |||||||||||||||         |||||||||||||| |||||||||||||||||||||||||||||  |||||||    
T  10143522 accaatatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgacaaaatctgatgaaagtgtaaggactaaaagcatattt 10143621  T
Q  117 aaa 119  Q
    |||    
T  10143622 aaa 10143624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 18 - 119
Target Start/End: Original strand, 33360759 - 33360861
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||| | |||||||||||||||         ||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  33360759 accaatatttttacaaagtgtagggaccaattccaaacaaaaaaaagtgtagggaccaatgtcaaaatctgatgaaagtgcaacgactaaagacatattt 33360858  T
Q  117 aaa 119  Q
    |||    
T  33360859 aaa 33360861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 33705905 - 33705803
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| ||| |||||||||||         |||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  33705905 accaatatttttacaaagtgcagggaacaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatattt 33705806  T
Q  117 aaa 119  Q
    |||    
T  33705805 aaa 33705803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 18 - 118
Target Start/End: Original strand, 6390222 - 6390323
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| |||||||||||||||         |||||||||||||| |||||||||||||||||| | |||||||||||||||||    
T  6390222 accaatatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcagggactaaagacatattt 6390321  T
Q  117 aa 118  Q
    ||    
T  6390322 aa 6390323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 14630918 - 14630815
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn--tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatt 115  Q
    |||||||| ||||||||||||| |||||||||||||||          |||||||||||||| |||||||||||||||||| ||||||||||| ||||||    
T  14630918 accaatatttttacaaagtgcagggaccaattccaaacaaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaaggcatatt 14630819  T
Q  116 taaa 119  Q
    ||||    
T  14630818 taaa 14630815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 20 - 119
Target Start/End: Complemental strand, 33877891 - 33877791
Alignment:
Q  20 caatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaa 118  Q
    |||||| |||||||||||||  ||||||||||||||         |||||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  33877891 caatatttttacaaagtgcactgaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgtaaggactaaaggcatatttaa 33877792  T
Q  119 a 119  Q
    |    
T  33877791 a 33877791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 64 - 119
Target Start/End: Original strand, 3199548 - 3199603
Alignment:
Q  64 tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaa 119  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  3199548 tgtagggaccaatgccaaaatctgataaaagtgtaaggactaaagacatatttaaa 3199603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 64 - 119
Target Start/End: Complemental strand, 6535464 - 6535409
Alignment:
Q  64 tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaa 119  Q
    |||||||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  6535464 tgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaa 6535409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 64 - 127
Target Start/End: Original strand, 12396020 - 12396083
Alignment:
Q  64 tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaatctaattt 127  Q
    |||||||||||||| ||||||||||| |||||| |||||||||||||||||||||| |||||||    
T  12396020 tgtagggaccaatgccaaaatctgattaaagtgcaaggactaaagacatatttaaacctaattt 12396083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 18 - 123
Target Start/End: Complemental strand, 583766 - 583658
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn---tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatat 114  Q
    |||||||| ||||||||||||| |||||||||||||||           || ||||||||||| |||||||||||||||||| ||||||||||| |||||    
T  583766 accaatatttttacaaagtgcagggaccaattccaaacaaaaaaaaaagtgcagggaccaatgccaaaatctgatgaaagtgcaaggactaaaggcatat 583667  T
Q  115 ttaaatcta 123  Q
    |||||||||    
T  583666 ttaaatcta 583658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 18 - 119
Target Start/End: Original strand, 605749 - 605853
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn---tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatat 114  Q
    |||||||| ||||||||||||| |||||||||||||||           |||||||| ||||| |||||||||||||||||| |||||||||||||||||    
T  605749 accaatatttttacaaagtgcagggaccaattccaaacaaaaaaaaaagtgtagggatcaatgccaaaatctgatgaaagtgcaaggactaaagacatat 605848  T
Q  115 ttaaa 119  Q
    |||||    
T  605849 ttaaa 605853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 18 - 118
Target Start/End: Original strand, 33243480 - 33243581
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| ||||||||||||||          |||||||||||||| |||||||||||||||||| ||||||||||| |||||||    
T  33243480 accaatatttttacaaagtgcagggaccaattccaaaaaaaaaaaaatgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaaggcatattt 33243579  T
Q  117 aa 118  Q
    ||    
T  33243580 aa 33243581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 32218947 - 32218844
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn--tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatt 115  Q
    |||||||| ||||||||||||| |||||||||||||||          |||||||||||||| |||||||||||||||||| ||||||||||  ||||||    
T  32218947 accaatatttttacaaagtgcagggaccaattccaaacaaaagaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaatgcatatt 32218848  T
Q  116 taaa 119  Q
    ||||    
T  32218847 taaa 32218844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 64 - 119
Target Start/End: Complemental strand, 5146875 - 5146820
Alignment:
Q  64 tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaa 119  Q
    |||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||    
T  5146875 tgtagggaccaatgccaaaatctaatgaaagtgcaaggactaaagacatatttaaa 5146820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 18 - 118
Target Start/End: Original strand, 5997501 - 5997603
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn--tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatt 115  Q
    |||||||| ||||||||||||| |||||||||||||||          |||||||||||||| |||||||||||||||||| | ||||||||| ||||||    
T  5997501 accaatatttttacaaagtgcagggaccaattccaaacaaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcagggactaaaggcatatt 5997600  T
Q  116 taa 118  Q
    |||    
T  5997601 taa 5997603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 21904969 - 21904867
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnnt-gtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| |||||||||||||  ||||||||||||||        | |||||||| |||  |||||||||||||||||| |||||||||||||||||||    
T  21904969 accaatatttttacaaagtgcagagaccaattccaaacaaaaaaaattgtagggactaataccaaaatctgatgaaagtgcaaggactaaagacatattt 21904870  T
Q  117 aaa 119  Q
    |||    
T  21904869 aaa 21904867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 21 - 119
Target Start/End: Original strand, 22695898 - 22695997
Alignment:
Q  21 aatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaa 119  Q
    ||||| ||||||||||||| |||||||||||||||         ||||| |||||||| |||||||| ||||||||| ||||||||||| ||||||||||    
T  22695898 aatatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtagagaccaatgccaaaatctaatgaaagtgcaaggactaaaggcatatttaaa 22695997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 16408842 - 16408740
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| |||||||||||||||         |||||||||||||| |||||| ||||||||||| || |||||||  |||||||    
T  16408842 accaatatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatatgatgaaagtgcaaagactaaatgcatattt 16408743  T
Q  117 aaa 119  Q
    |||    
T  16408742 aaa 16408740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 22695659 - 22695557
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| |||||||| ||||||         || |||||||||||||||||||||||||||||| | |||| || |||| ||||    
T  22695659 accaatatttttacaaagtgcaaggaccaatgccaaacaaaaaaaagtgcagggaccaatgtcaaaatctgatgaaagtgcagggaccaatgacacattt 22695560  T
Q  117 aaa 119  Q
    |||    
T  22695559 aaa 22695557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 118
Target Start/End: Original strand, 17204171 - 17204272
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||| | |||||||||||||||         ||||||||| ||||  ||||||||||||||||| | |||||||||| ||||||    
T  17204171 accaatatttttacaaagtgtagggaccaattccaaacaaaataaagtgtagggacgaatgctaaaatctgatgaaagtgcagggactaaagatatattt 17204270  T
Q  117 aa 118  Q
    ||    
T  17204271 aa 17204272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 121
Target Start/End: Original strand, 32219155 - 32219259
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| |||||||| ||||||         || ||||||||||| |||||||||||||||||| |||||| || |||| ||||    
T  32219155 accaatatttttacaaagtgcagggaccaataccaaacaaaaaaaagtgcagggaccaatgccaaaatctgatgaaagtgcaaggaccaatgacacattt 32219254  T
Q  117 aaatc 121  Q
     ||||    
T  32219255 caatc 32219259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 2793341 - 2793420
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtg 96  Q
    |||||||| ||||||||||| | |||||||||||||||         ||||||||||||||| |||||||||||||||||    
T  2793341 accaatatttttacaaagtgtagggaccaattccaaacaaaaaaaagtgtagggaccaatgttaaaatctgatgaaagtg 2793420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 64 - 119
Target Start/End: Complemental strand, 3199364 - 3199309
Alignment:
Q  64 tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaa 119  Q
    |||||||||||||| |||||||||||||||||| | |||| || |||| |||||||    
T  3199364 tgtagggaccaatgccaaaatctgatgaaagtgcagggaccaatgacacatttaaa 3199309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 16409050 - 16409129
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtg 96  Q
    |||||||| ||||||||||||| |||||||| ||||||         || ||||||||||||||||||||||||||||||    
T  16409050 accaatatttttacaaagtgcagggaccaatgccaaacaaaaaaaagtgcagggaccaatgtcaaaatctgatgaaagtg 16409129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 33360551 - 33360444
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| |||||||| ||||||         || ||||||||||| |||||||||||||||||| | |||| || |||| ||||    
T  33360551 accaatatttttacaaagtgcagggaccaataccaaacaaaaaaaagtgcagggaccaatgccaaaatctgatgaaagtgcagggaccaatgacacattt 33360452  T
Q  117 aaatctaa 124  Q
    ||| ||||    
T  33360451 aaacctaa 33360444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 6390016 - 6389914
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| |||||||| ||||||         || |||||||||| ||||||||||||||||||| | |||| || |||| ||||    
T  6390016 accaatatttttacaaagtgcagggaccaatgccaaacaaaaaaaagtgcagggaccaatatcaaaatctgatgaaagtgcagggaccaatgacacattt 6389917  T
Q  117 aaa 119  Q
    |||    
T  6389916 aaa 6389914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 9566100 - 9565998
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| |||||||| ||||||         || ||||||||||| |||||||||||||||||| | |||| || |||| ||||    
T  9566100 accaatatttttacaaagtgcagggaccaatgccaaacaaaaaaaagtgcagggaccaatgccaaaatctgatgaaagtgcagggaccaatgacacattt 9566001  T
Q  117 aaa 119  Q
    |||    
T  9566000 aaa 9565998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 119
Target Start/End: Original strand, 21905368 - 21905470
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| |||||||| ||||||         || ||||||||||| |||||||||||||||||| | |||| || |||| ||||    
T  21905368 accaatatttttacaaagtgcagggaccaatgccaaacaaaaaaaagtgcagggaccaatggcaaaatctgatgaaagtgcagggaccaatgacacattt 21905467  T
Q  117 aaa 119  Q
    |||    
T  21905468 aaa 21905470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 67 - 119
Target Start/End: Complemental strand, 605531 - 605479
Alignment:
Q  67 agggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaa 119  Q
    ||||||||||| |||||||||||| ||||| |||||| || |||| |||||||    
T  605531 agggaccaatgccaaaatctgatggaagtgcaaggaccaatgacacatttaaa 605479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 67 - 119
Target Start/End: Original strand, 6535739 - 6535791
Alignment:
Q  67 agggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaa 119  Q
    ||||||||||| |||||||||||||||||| | |||| || |||| |||||||    
T  6535739 agggaccaatgccaaaatctgatgaaagtgcagggaccaatgacacatttaaa 6535791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 5e-23; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 21766612 - 21766505
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| |||||||||||||||         |||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  21766612 accaatatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatattt 21766513  T
Q  117 aaatctaa 124  Q
    ||| ||||    
T  21766512 aaacctaa 21766505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 6626270 - 6626168
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| |||||||||||||||         |||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  6626270 accaatatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatattt 6626171  T
Q  117 aaa 119  Q
    |||    
T  6626170 aaa 6626168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 18 - 126
Target Start/End: Complemental strand, 39997748 - 39997639
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| |||||||||||||||         ||||||| ||||||||||||||||||||||||| || ||||||||||||||||    
T  39997748 accaatatttttacaaagtgcaaggaccaattccaaacaaaaaaaagtgtaggggccaatgtcaaaatctgatgaaagtgcaaagactaaagacatattt 39997649  T
Q  117 aaatctaatt 126  Q
    ||| ||||||    
T  39997648 aaacctaatt 39997639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 18732742 - 18732635
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| ||||||||| |||||         |||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  18732742 accaatatttttacaaagtgcagggaccaatttcaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatattt 18732643  T
Q  117 aaatctaa 124  Q
    ||| ||||    
T  18732642 aaacctaa 18732635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 18 - 119
Target Start/End: Original strand, 35193628 - 35193730
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| |||||||||| || |||||||||||||||         ||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  35193628 accaatatttttacaaagtacaaggaccaattccaaacaaaaaaaagtgtagggaccaatgtcaaaatctgatgaaagtgcaaggactaaaggcatattt 35193727  T
Q  117 aaa 119  Q
    |||    
T  35193728 aaa 35193730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 18 - 119
Target Start/End: Original strand, 38816538 - 38816640
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| |||||||||||||||         |||||||||||||| |||||||||||||||||| ||||||||||| |||||||    
T  38816538 accaatatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagtcatattt 38816637  T
Q  117 aaa 119  Q
    |||    
T  38816638 aaa 38816640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 18 - 118
Target Start/End: Complemental strand, 44141513 - 44141412
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| |||||||||||||||         |||||||||||||| |||||||||||||||||| | |||||||||||||||||    
T  44141513 accaatatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcagggactaaagacatattt 44141414  T
Q  117 aa 118  Q
    ||    
T  44141413 aa 44141412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 18 - 133
Target Start/End: Original strand, 47404159 - 47404275
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| ||||||||||||||          |||||||||||||| |||||||||||||||||| |||||||||| ||||||||    
T  47404159 accaatatttttacaaagtgcagggaccaattccaaaaaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaaaacatattt 47404258  T
Q  117 aaatctaatttaaatat 133  Q
    ||| | ||||| |||||    
T  47404259 aaaccaaattttaatat 47404275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 64 - 119
Target Start/End: Original strand, 6607877 - 6607932
Alignment:
Q  64 tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaa 119  Q
    |||||||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  6607877 tgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaa 6607932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 20 - 119
Target Start/End: Original strand, 19276955 - 19277056
Alignment:
Q  20 caatatatttacaaagtgcatggaccaattccaaacnnnnnnnn--tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattta 117  Q
    |||||| ||||||||||||| |||||||||||||||          |||||||||||||| |||||||||||||||||| |||||||||||| |||||||    
T  19276955 caatatttttacaaagtgcagggaccaattccaaacaaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagatatattta 19277054  T
Q  118 aa 119  Q
    ||    
T  19277055 aa 19277056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 24000025 - 23999923
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||  |||||||||||||||         | |||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  24000025 accaatatttttacaaagtgccgggaccaattccaaacaaaaaaaaatttaggaaccaatgtcaaaatctgatgaaagtgcaaggactaaagacatattt 23999926  T
Q  117 aaa 119  Q
    |||    
T  23999925 aaa 23999923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 18 - 117
Target Start/End: Complemental strand, 24164118 - 24164017
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn--tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatt 115  Q
    |||||||| ||||||||||||| |||||||||||| ||          |||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  24164118 accaatatttttacaaagtgcagggaccaattccagacaaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatt 24164019  T
Q  116 ta 117  Q
    ||    
T  24164018 ta 24164017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 18 - 115
Target Start/End: Complemental strand, 26174719 - 26174621
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatt 115  Q
    |||||||| ||||||||||||| |||||||||||||||         |||||||||||||| |||||||||||||||||| ||||||||||| ||||||    
T  26174719 accaatatttttacaaagtgcagggaccaattccaaacaaaaaaaaatgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaaggcatatt 26174621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 18 - 121
Target Start/End: Original strand, 39103010 - 39103115
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn--tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatt 115  Q
    |||||||| ||||||||||||| |||||||||||||||          |||||||||||||| ||||||||||||||||||  |||||||||| ||||||    
T  39103010 accaatatttttacaaagtgcagggaccaattccaaacaaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgctaggactaaaggcatatt 39103109  T
Q  116 taaatc 121  Q
    ||||||    
T  39103110 taaatc 39103115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 18 - 119
Target Start/End: Original strand, 41320648 - 41320750
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| |||||||||||||||         |||||||||||||| |||||||||||||||||| ||||||||||  |||||||    
T  41320648 accaatatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaatgcatattt 41320747  T
Q  117 aaa 119  Q
    |||    
T  41320748 aaa 41320750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 20 - 119
Target Start/End: Complemental strand, 21438343 - 21438245
Alignment:
Q  20 caatatatttacaaagtgcatggaccaattccaaacnnnnnnnntgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaa 119  Q
    |||||| ||||||||||||| ||||||||||||||         |||||||||||||| |||||||||||||||||| | ||| ||||||||||||||||    
T  21438343 caatatttttacaaagtgcagggaccaattccaaaaaaaaaaaatgtagggaccaatgccaaaatctgatgaaagtgcaggga-taaagacatatttaaa 21438245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 69 - 119
Target Start/End: Original strand, 2765300 - 2765350
Alignment:
Q  69 ggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaa 119  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  2765300 ggaccaatgtcaaaatttgatgaaagtgcaaggactaaagacatatttaaa 2765350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 119
Target Start/End: Original strand, 8952720 - 8952822
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||| | |||||||||||||||         |||||||||||||| |||||||||||||||||| ||| ||||||| |||||||    
T  8952720 accaatatttttacaaagtgtagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaagcactaaaggcatattt 8952819  T
Q  117 aaa 119  Q
    |||    
T  8952820 aaa 8952822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 10336223 - 10336122
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| |||||||||| || |||||||||||||||         ||||||||||||||||||||||||||||||||| ||||| |||| ||||||||    
T  10336223 accaatatttttacaaagtacagggaccaattccaaacaaaaaaaactgtagggaccaatgtcaaaatctgatgaaagtgcaagga-taaacacatattt 10336125  T
Q  117 aaa 119  Q
    |||    
T  10336124 aaa 10336122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 18 - 118
Target Start/End: Original strand, 21276573 - 21276674
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| ||||||||| |||||         |||||||||||||| |||||||| ||||||||| | |||||||||||||||||    
T  21276573 accaatatttttacaaagtgcagggaccaatttcaaacaaaaaaaagtgtagggaccaatgccaaaatcttatgaaagtgcagggactaaagacatattt 21276672  T
Q  117 aa 118  Q
    ||    
T  21276673 aa 21276674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 18 - 118
Target Start/End: Complemental strand, 48863388 - 48863287
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||||||| |||||||||||         |||||||||||||| |||||||||| ||||||| | ||||||||| |||||||    
T  48863388 accaatatttttacaaagtgcatggatcaattccaaacaaaaaaaaatgtagggaccaatgccaaaatctgaggaaagtgcagggactaaaggcatattt 48863289  T
Q  117 aa 118  Q
    ||    
T  48863288 aa 48863287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 18 - 118
Target Start/End: Complemental strand, 31849535 - 31849440
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnntgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattta 117  Q
    |||||||| ||||||||||||| ||||||||||||||         |||||||||||||| |||||||||||||||||| | ||||||||  ||||||||    
T  31849535 accaatatttttacaaagtgcagggaccaattccaaa-----aaaatgtagggaccaatgccaaaatctgatgaaagtgcagggactaaatgcatattta 31849441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 21 - 124
Target Start/End: Original strand, 11638294 - 11638397
Alignment:
Q  21 aatatatttacaaagtgcatggaccaattccaaacnnnnnnnntgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaat 120  Q
    ||||| |||||||||||||| ||||||| ||||||        | |||||| |||||||||||||||||||||||| | |||| || |||| ||||||||    
T  11638294 aatatttttacaaagtgcatagaccaatgccaaacaaaaaaagtatagggatcaatgtcaaaatctgatgaaagtgcagggaccaatgacacatttaaat 11638393  T
Q  121 ctaa 124  Q
    ||||    
T  11638394 ctaa 11638397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 124
Target Start/End: Original strand, 36508341 - 36508448
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| |||||||||||||||         |||||||| ||||  |||||||||||||||||  ||||||||||| |||||||    
T  36508341 accaatatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtagggatcaataccaaaatctgatgaaagtacaaggactaaaggcatattt 36508440  T
Q  117 aaatctaa 124  Q
    ||| ||||    
T  36508441 aaacctaa 36508448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 17356706 - 17356605
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnntgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattta 117  Q
    |||||||| ||||||||||||| ||||||||  |||||        || |||||||||||||||||| ||||||||||||| |||| || |||| |||||    
T  17356706 accaatatttttacaaagtgcagggaccaatgtcaaacaaaaaaaatgcagggaccaatgtcaaaatttgatgaaagtgtagggaccaatgacacattta 17356607  T
Q  118 aa 119  Q
    ||    
T  17356606 aa 17356605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 64 - 124
Target Start/End: Complemental strand, 47913176 - 47913116
Alignment:
Q  64 tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaatctaa 124  Q
    |||||||||||||| |||||||||||||||||| |||||| ||  ||| ||||||||||||    
T  47913176 tgtagggaccaatgccaaaatctgatgaaagtgcaaggaccaataacacatttaaatctaa 47913116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 64 - 118
Target Start/End: Original strand, 17356961 - 17357015
Alignment:
Q  64 tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaa 118  Q
    |||||||| ||||| |||||||||||||||||| | | |||||||||||||||||    
T  17356961 tgtagggatcaatgccaaaatctgatgaaagtgcaggaactaaagacatatttaa 17357015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 119
Target Start/End: Original strand, 24164293 - 24164395
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| |||||||| ||||||         || ||||||||||| |||||||||||||||||||| |||| || |||| ||||    
T  24164293 accaatatttttacaaagtgcagggaccaatgccaaacaaaaaaaagtgcagggaccaatgccaaaatctgatgaaagtgtagggaccaatgacacattt 24164392  T
Q  117 aaa 119  Q
    |||    
T  24164393 aaa 24164395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 127
Target Start/End: Original strand, 18732935 - 18733044
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnntgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattta 117  Q
    |||||||| ||||||||||||| ||||||||  |||||        || || |||||||||||||||||||||||| || | |||| || |||| |||||    
T  18732935 accaatatttttacaaagtgcagggaccaatgacaaacaaaaaaagtgcagagaccaatgtcaaaatctgatgaaaatgcagggaccaatgacacattta 18733034  T
Q  118 aatctaattt 127  Q
    || |||||||    
T  18733035 aacctaattt 18733044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 118
Target Start/End: Complemental strand, 31657522 - 31657421
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| ||| |||||||||||         |||||| ||||||| |||||||||||||||||| | | ||||||| |||||||    
T  31657522 accaatatttttacaaagtgcagggatcaattccaaacaaaaaaaagtgtaggaaccaatgacaaaatctgatgaaagtgcaggaactaaaggcatattt 31657423  T
Q  117 aa 118  Q
    ||    
T  31657422 aa 31657421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 67 - 119
Target Start/End: Original strand, 5850833 - 5850885
Alignment:
Q  67 agggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaa 119  Q
    ||||||||||| |||||||||||||||||||| |||| || |||| |||||||    
T  5850833 agggaccaatgccaaaatctgatgaaagtgtatggaccaacgacacatttaaa 5850885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 38567603 - 38567500
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn--tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatt 115  Q
    |||||||| |||||||||| |||||| |||||||||||          |||||||||||||| |||||| |||||||| ||  |||||||||| ||||||    
T  38567603 accaatatttttacaaagtacatggatcaattccaaacaaaaaaaaagtgtagggaccaatgccaaaatatgatgaaaatgcgaggactaaaggcatatt 38567504  T
Q  116 taaa 119  Q
    ||||    
T  38567503 taaa 38567500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 67 - 119
Target Start/End: Original strand, 48863504 - 48863556
Alignment:
Q  67 agggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaa 119  Q
    ||||||||||| |||||||||||||||||| |||||| || |||| |||||||    
T  48863504 agggaccaatgccaaaatctgatgaaagtgcaaggaccaatgacacatttaaa 48863556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 19276743 - 19276641
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| |||||||| ||||||         || |||||||||| ||||||||||||||||||| | |||| || |||| ||||    
T  19276743 accaatatttttacaaagtgcagggaccaatgccaaacaaaataaagtgcagggaccaatttcaaaatctgatgaaagtgcagggaccaatgacacattt 19276644  T
Q  117 aaa 119  Q
    |||    
T  19276643 aaa 19276641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 39385021 - 39385058
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaac 55  Q
    |||||||| ||||||||||||| |||||||||||||||    
T  39385021 accaatatttttacaaagtgcagggaccaattccaaac 39385058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 124
Target Start/End: Original strand, 47913480 - 47913537
Alignment:
Q  67 agggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaatctaa 124  Q
    ||||||||||| |||||||||||||||||| | |||| ||  ||| ||||||||||||    
T  47913480 agggaccaatgccaaaatctgatgaaagtgcagggaccaataacacatttaaatctaa 47913537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 67 - 119
Target Start/End: Original strand, 31849756 - 31849808
Alignment:
Q  67 agggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaa 119  Q
    ||||||||||| |||||||||||||||||| | |||| || |||| |||||||    
T  31849756 agggaccaatgccaaaatctgatgaaagtgcagggaccaatgacacatttaaa 31849808  T

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Target: scaffold0275 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 1370 - 1268
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| |||||||||||||||         |||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  1370 accaatatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatattt 1271  T
Q  117 aaa 119  Q
    |||    
T  1270 aaa 1268  T

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Target: scaffold0170 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 5613 - 5511
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| |||||||||||||||         |||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  5613 accaatatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatattt 5514  T
Q  117 aaa 119  Q
    |||    
T  5513 aaa 5511  T

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Target: scaffold0170; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 67 - 119
Target Start/End: Original strand, 5814 - 5866
Alignment:
Q  67 agggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaa 119  Q
    ||||||||||| |||||||||||||||||| | |||| || |||| |||||||    
T  5814 agggaccaatgccaaaatctgatgaaagtgcagggaccaatgacacatttaaa 5866  T

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Target: scaffold0079 (Bit Score: 51; Significance: 5e-20; HSPs: 2)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 57493 - 57391
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| |||||||||||||||         |||||||||||||| |||||| |||||||||||||||||||||| ||||||||    
T  57493 accaatatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtagggaccaatgccaaaatatgatgaaagtgtaaggactaaatacatattt 57394  T
Q  117 aaa 119  Q
    |||    
T  57393 aaa 57391  T

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Target: scaffold0079; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 67 - 119
Target Start/End: Original strand, 57750 - 57802
Alignment:
Q  67 agggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaa 119  Q
    ||||||||||| |||||||||||||||||| | |||| || |||| |||||||    
T  57750 agggaccaatgccaaaatctgatgaaagtgcagggaccaatgacagatttaaa 57802  T

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Target: scaffold0015 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 18 - 131
Target Start/End: Original strand, 50025 - 50139
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||| |||||||||||||||||         |||||||||||||| |||||||||||||||||| | |||||||||||||||||    
T  50025 accaatatttttacaaagtgtatggaccaattccaaacaaaataaagtgtagggaccaatgccaaaatctgatgaaagtgcagggactaaagacatattt 50124  T
Q  117 aaatctaatttaaat 131  Q
    ||  || ||||||||    
T  50125 aagccttatttaaat 50139  T

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Target: scaffold0009 (Bit Score: 51; Significance: 5e-20; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 58551 - 58449
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| |||||||||||||||         |||| |||||||||||||||| ||||||||||| |||||||||||||||||||    
T  58551 accaatatttttacaaagtgcagggaccaattccaaacaaaaaaaagtgtaaggaccaatgtcaaaatttgatgaaagtgcaaggactaaagacatattt 58452  T
Q  117 aaa 119  Q
    |||    
T  58451 aaa 58449  T

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Target: scaffold0009; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 119
Target Start/End: Original strand, 58728 - 58830
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| |||||||| ||||||         || ||||||||||| |||||||||||||||||| | |||| || |||| ||||    
T  58728 accaatatttttacaaagtgcagggaccaatgccaaacaaaaaaaagtgcagggaccaatgccaaaatctgatgaaagtgcatggaccaatgacacattt 58827  T
Q  117 aaa 119  Q
    |||    
T  58828 aaa 58830  T

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Target: scaffold0036 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 16893 - 16828
Alignment:
Q  64 tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaatctaatttaa 129  Q
    ||||| |||||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||    
T  16893 tgtagagaccaatgtcaaaatctgataaaagtgtaaggactaaagacatatttaaacttaatttaa 16828  T

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Target: scaffold1095 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold1095
Description:

Target: scaffold1095; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 64 - 119
Target Start/End: Original strand, 23 - 78
Alignment:
Q  64 tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaa 119  Q
    |||||||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  23 tgtagggaccaatgccaaaatctgatgaaagtgcaaggactaaagacatatttaaa 78  T

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Target: scaffold0045 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 21 - 132
Target Start/End: Complemental strand, 35436 - 35323
Alignment:
Q  21 aatatatttacaaagtgcatggaccaattccaaacnnnnnnnn--tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaa 118  Q
    ||||| ||||||||||||| |||||||||||||||          ||||| |||||||| |||||||||||||||||| ||||| |||||||||||||||    
T  35436 aatatttttacaaagtgcagggaccaattccaaacaaaaaaaaagtgtagtgaccaatgccaaaatctgatgaaagtgcaaggattaaagacatatttaa 35337  T
Q  119 atctaatttaaata 132  Q
    | |||||| |||||    
T  35336 acctaattaaaata 35323  T

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Target: scaffold0385 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 18 - 118
Target Start/End: Complemental strand, 13071 - 12971
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnntgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattta 117  Q
    |||||||| |||||||| |||| |||||||||||||||        |||||||||||||| |||||| ||||||||||| | ||||||||| ||||||||    
T  13071 accaatatttttacaaactgcagggaccaattccaaacaaaaaaagtgtagggaccaatgccaaaatttgatgaaagtgcagggactaaaggcatattta 12972  T
Q  118 a 118  Q
    |    
T  12971 a 12971  T

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Target: scaffold0302 (Bit Score: 44; Significance: 8e-16; HSPs: 2)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 18 - 124
Target Start/End: Original strand, 14434 - 14541
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| ||||||||| |||||         |||||||||||||  |||||||||||||||||| ||||||||||| |||||||    
T  14434 accaatatttttacaaagtgcagggaccaatttcaaacaaaaaaaagtgtagggaccaataccaaaatctgatgaaagtgcaaggactaaaggcatattt 14533  T
Q  117 aaatctaa 124  Q
    ||| ||||    
T  14534 aaacctaa 14541  T

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Target: scaffold0302; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 14229 - 14127
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| |||||||| ||||||         || ||||||||||| |||||||||||||||||| | |||| || |||| ||||    
T  14229 accaatatttttacaaagtgcagggaccaatgccaaacaaaaaaaagtgcagggaccaatgccaaaatctgatgaaagtgcagggaccaatgacacattt 14130  T
Q  117 aaa 119  Q
    |||    
T  14129 aaa 14127  T

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Target: scaffold0825 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0825
Description:

Target: scaffold0825; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 1278 - 1176
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| ||||||||| |||||         |||||||| ||||| |||||||||||||||||| ||||||||||| |||||||    
T  1278 accaatatttttacaaagtgcagggaccaatttcaaacaaaaaaaagtgtagggatcaatgccaaaatctgatgaaagtgcaaggactaaaggcatattt 1179  T
Q  117 aaa 119  Q
    |||    
T  1178 aaa 1176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 119
Target Start/End: Original strand, 9845 - 9947
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn-tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatattt 116  Q
    |||||||| ||||||||||||| |||||||||||||||         |||||||||||||| ||||||||||| |||||| ||||| ||||| |||||||    
T  9845 accaatatttttacaaagtgcagggaccaattccaaacaaaaaatggtgtagggaccaatgccaaaatctgataaaagtgcaaggattaaaggcatattt 9944  T
Q  117 aaa 119  Q
    |||    
T  9945 aaa 9947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0229 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 124
Target Start/End: Original strand, 24345 - 24453
Alignment:
Q  18 accaatatatttacaaagtgcatggaccaattccaaacnnnnnnnn--tgtagggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatt 115  Q
    |||||||| ||||||||||||| ||||||||||| |||          |||||||||||||| | |||| |||||||||||  |||||||||| ||||||    
T  24345 accaatatttttacaaagtgcagggaccaattcccaaccaaaaaaaagtgtagggaccaatgcccaaatttgatgaaagtgccaggactaaaggcatatt 24444  T
Q  116 taaatctaa 124  Q
    |||| ||||    
T  24445 taaacctaa 24453  T

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Target: scaffold0185 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 69 - 119
Target Start/End: Complemental strand, 8115 - 8065
Alignment:
Q  69 ggaccaatgtcaaaatctgatgaaagtgtaaggactaaagacatatttaaa 119  Q
    |||||||||||||||||||||||||||| | |||| |  ||||||||||||    
T  8115 ggaccaatgtcaaaatctgatgaaagtgcagggaccagtgacatatttaaa 8065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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