View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6512_high_10 (Length: 224)

Name: NF6512_high_10
Description: NF6512
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6512_high_10
NF6512_high_10
[»] chr3 (57 HSPs)
chr3 (6-216)||(54897220-54897435)
chr3 (13-107)||(5173968-5174063)
chr3 (44-110)||(4227734-4227800)
chr3 (7-110)||(24303404-24303508)
chr3 (34-110)||(49983688-49983764)
chr3 (34-110)||(52992039-52992115)
chr3 (32-108)||(55383866-55383942)
chr3 (44-107)||(3614070-3614133)
chr3 (8-98)||(28951742-28951833)
chr3 (2-110)||(30779513-30779623)
chr3 (12-110)||(49750363-49750462)
chr3 (3-110)||(52309060-52309166)
chr3 (13-102)||(27837288-27837377)
chr3 (9-110)||(29098706-29098808)
chr3 (13-110)||(38949688-38949786)
chr3 (9-110)||(47098530-47098632)
chr3 (33-98)||(26880203-26880268)
chr3 (28-72)||(8497071-8497115)
chr3 (34-110)||(19222566-19222642)
chr3 (34-110)||(32401505-32401580)
chr3 (9-84)||(36331710-36331784)
chr3 (28-90)||(25883962-25884024)
chr3 (13-98)||(49443381-49443467)
chr3 (28-73)||(8488478-8488523)
chr3 (7-110)||(44764736-44764838)
chr3 (19-98)||(43280094-43280174)
chr3 (34-110)||(45647317-45647393)
chr3 (13-110)||(50675699-50675798)
chr3 (6-77)||(31902185-31902256)
chr3 (9-71)||(53986493-53986556)
chr3 (28-110)||(2106038-2106120)
chr3 (9-84)||(17729031-17729108)
chr3 (9-84)||(19030260-19030337)
chr3 (28-110)||(22472288-22472370)
chr3 (44-110)||(32776225-32776291)
chr3 (13-110)||(48515343-48515441)
chr3 (17-110)||(49375643-49375737)
chr3 (12-110)||(29559630-29559730)
chr3 (13-111)||(34102568-34102668)
chr3 (33-110)||(42785908-42785985)
chr3 (33-98)||(46844950-46845015)
chr3 (13-110)||(11436518-11436617)
chr3 (63-107)||(12736993-12737037)
chr3 (63-107)||(12737619-12737663)
chr3 (28-108)||(14795127-14795207)
chr3 (42-110)||(15491867-15491935)
chr3 (9-78)||(16231845-16231916)
chr3 (7-98)||(18764820-18764911)
chr3 (28-72)||(27329906-27329950)
chr3 (1-110)||(31528903-31529014)
chr3 (13-110)||(39719949-39720048)
chr3 (13-110)||(41936364-41936463)
chr3 (28-72)||(44625199-44625243)
chr3 (9-110)||(48739697-48739800)
chr3 (28-72)||(51879147-51879191)
chr3 (62-110)||(52089327-52089375)
chr3 (13-110)||(53432694-53432793)
[»] chr8 (42 HSPs)
chr8 (28-110)||(13059151-13059233)
chr8 (9-110)||(17499043-17499146)
chr8 (9-110)||(24480774-24480877)
chr8 (31-110)||(42023425-42023503)
chr8 (9-110)||(12770382-12770484)
chr8 (28-110)||(13105105-13105187)
chr8 (28-110)||(23339870-23339952)
chr8 (44-106)||(25824892-25824954)
chr8 (34-108)||(25890384-25890458)
chr8 (9-108)||(36358983-36359083)
chr8 (33-103)||(41272115-41272185)
chr8 (33-106)||(6851005-6851078)
chr8 (34-110)||(481025-481101)
chr8 (34-110)||(38283138-38283214)
chr8 (9-84)||(39674012-39674088)
chr8 (34-106)||(44156730-44156801)
chr8 (13-110)||(18412570-18412668)
chr8 (9-52)||(29499649-29499692)
chr8 (1-110)||(8698526-8698636)
chr8 (4-110)||(5332930-5333038)
chr8 (6-84)||(34873126-34873206)
chr8 (13-97)||(43846962-43847047)
chr8 (33-108)||(550317-550392)
chr8 (13-110)||(8034369-8034468)
chr8 (9-57)||(34761034-34761082)
chr8 (9-84)||(5570934-5571011)
chr8 (76-110)||(9814735-9814769)
chr8 (9-110)||(10083177-10083279)
chr8 (60-110)||(20894704-20894754)
chr8 (28-110)||(24517309-24517391)
chr8 (6-110)||(20540057-20540162)
chr8 (81-110)||(30676331-30676360)
chr8 (14-110)||(39362279-39362378)
chr8 (34-110)||(2114898-2114973)
chr8 (13-108)||(2908049-2908145)
chr8 (13-110)||(5328524-5328623)
chr8 (34-110)||(26796972-26797047)
chr8 (31-111)||(27977014-27977094)
chr8 (31-111)||(28034283-28034363)
chr8 (28-72)||(31024346-31024390)
chr8 (13-110)||(34894383-34894482)
chr8 (28-84)||(36035153-36035209)
[»] chr5 (35 HSPs)
chr5 (28-98)||(7443365-7443435)
chr5 (6-110)||(39799980-39800086)
chr5 (28-110)||(8241064-8241146)
chr5 (9-110)||(41083492-41083593)
chr5 (3-110)||(6167224-6167335)
chr5 (34-111)||(32550189-32550266)
chr5 (34-110)||(436541-436617)
chr5 (9-110)||(5966843-5966944)
chr5 (26-110)||(39777772-39777856)
chr5 (9-110)||(3198341-3198443)
chr5 (32-106)||(18890345-18890418)
chr5 (34-108)||(20145544-20145618)
chr5 (9-110)||(28822710-28822812)
chr5 (9-110)||(12473996-12474097)
chr5 (9-97)||(25460733-25460823)
chr5 (9-105)||(33018480-33018576)
chr5 (9-111)||(35241409-35241512)
chr5 (28-84)||(3740994-3741050)
chr5 (52-108)||(7462845-7462901)
chr5 (34-113)||(28758397-28758477)
chr5 (9-72)||(38696742-38696806)
chr5 (47-110)||(40361572-40361635)
chr5 (28-110)||(1469739-1469821)
chr5 (3-84)||(38128989-38129071)
chr5 (28-57)||(5272177-5272206)
chr5 (34-111)||(11313491-11313568)
chr5 (31-84)||(16720583-16720636)
chr5 (30-110)||(37303944-37304024)
chr5 (34-110)||(4067996-4068072)
chr5 (11-90)||(8571827-8571907)
chr5 (9-110)||(11897262-11897365)
chr5 (74-110)||(20501409-20501445)
chr5 (34-110)||(36270755-36270831)
chr5 (34-98)||(37684526-37684590)
chr5 (1-110)||(42525414-42525525)
[»] chr4 (49 HSPs)
chr4 (28-110)||(624494-624576)
chr4 (13-110)||(41137877-41137976)
chr4 (34-106)||(29406375-29406447)
chr4 (13-110)||(42134414-42134513)
chr4 (34-110)||(45139861-45139937)
chr4 (34-106)||(46791188-46791260)
chr4 (7-110)||(51890811-51890915)
chr4 (13-110)||(31852363-31852461)
chr4 (28-110)||(33933713-33933795)
chr4 (13-110)||(27091431-27091528)
chr4 (9-110)||(13264227-13264330)
chr4 (9-88)||(38848074-38848154)
chr4 (13-95)||(40486470-40486553)
chr4 (9-111)||(43627215-43627318)
chr4 (13-98)||(11294796-11294882)
chr4 (13-98)||(32293134-32293220)
chr4 (9-98)||(42664007-42664097)
chr4 (31-108)||(55260290-55260367)
chr4 (34-98)||(2629605-2629669)
chr4 (34-110)||(12625843-12625919)
chr4 (13-110)||(39023189-39023288)
chr4 (13-110)||(40051636-40051735)
chr4 (34-110)||(42044026-42044102)
chr4 (62-110)||(50376657-50376705)
chr4 (28-111)||(43539825-43539908)
chr4 (28-110)||(13578439-13578521)
chr4 (13-72)||(17447146-17447207)
chr4 (35-105)||(25224491-25224561)
chr4 (3-84)||(33359854-33359936)
chr4 (28-110)||(47890709-47890791)
chr4 (13-110)||(49264540-49264638)
chr4 (9-72)||(54215813-54215878)
chr4 (62-99)||(11128742-11128779)
chr4 (62-107)||(22530160-22530205)
chr4 (29-110)||(32339338-32339419)
chr4 (2-102)||(44568166-44568267)
chr4 (28-56)||(5803544-5803572)
chr4 (13-110)||(10402455-10402554)
chr4 (13-86)||(13161785-13161859)
chr4 (34-98)||(19654872-19654936)
chr4 (9-110)||(21935491-21935594)
chr4 (13-110)||(26919425-26919524)
chr4 (12-72)||(31777858-31777918)
chr4 (9-84)||(32760682-32760758)
chr4 (28-72)||(36099157-36099201)
chr4 (13-110)||(45849061-45849160)
chr4 (62-110)||(50279048-50279096)
chr4 (28-108)||(55521437-55521517)
chr4 (9-110)||(56087907-56088010)
[»] chr6 (27 HSPs)
chr6 (34-111)||(32788834-32788911)
chr6 (3-110)||(3294778-3294887)
chr6 (34-110)||(23610299-23610375)
chr6 (9-106)||(32283556-32283654)
chr6 (13-110)||(2488845-2488942)
chr6 (14-110)||(978094-978190)
chr6 (13-104)||(17534867-17534959)
chr6 (26-84)||(3709899-3709957)
chr6 (9-84)||(18904305-18904382)
chr6 (34-111)||(24319026-24319103)
chr6 (13-110)||(15963900-15963999)
chr6 (34-98)||(31952295-31952359)
chr6 (28-95)||(32670028-32670095)
chr6 (32-110)||(2251852-2251930)
chr6 (13-42)||(6338653-6338682)
chr6 (28-105)||(20846065-20846142)
chr6 (12-57)||(30064330-30064375)
chr6 (34-107)||(34268299-34268372)
chr6 (1-70)||(361217-361288)
chr6 (13-110)||(7177309-7177408)
chr6 (13-110)||(9372158-9372257)
chr6 (9-110)||(12284135-12284238)
chr6 (31-111)||(13436557-13436637)
chr6 (1-110)||(20728965-20729076)
chr6 (9-110)||(22997350-22997453)
chr6 (9-110)||(23790948-23791051)
chr6 (34-98)||(32620051-32620115)
[»] chr1 (46 HSPs)
chr1 (28-111)||(8741486-8741569)
chr1 (28-110)||(619375-619458)
chr1 (13-110)||(23991222-23991320)
chr1 (33-106)||(51137802-51137875)
chr1 (31-110)||(2997634-2997713)
chr1 (28-110)||(44579896-44579979)
chr1 (9-110)||(11333678-11333780)
chr1 (9-110)||(11491699-11491801)
chr1 (7-98)||(31124590-31124682)
chr1 (34-110)||(36666556-36666632)
chr1 (7-88)||(34557275-34557357)
chr1 (6-108)||(43021573-43021676)
chr1 (39-106)||(44546039-44546106)
chr1 (9-70)||(52426867-52426929)
chr1 (33-98)||(26909849-26909914)
chr1 (33-100)||(10632718-10632786)
chr1 (34-110)||(11860056-11860132)
chr1 (34-110)||(24874985-24875061)
chr1 (34-110)||(33843175-33843251)
chr1 (34-110)||(33950728-33950804)
chr1 (9-110)||(43884808-43884911)
chr1 (9-110)||(44732647-44732750)
chr1 (34-110)||(47469053-47469129)
chr1 (31-98)||(14320916-14320983)
chr1 (9-113)||(33033137-33033243)
chr1 (32-111)||(44245367-44245445)
chr1 (14-84)||(44440616-44440687)
chr1 (34-113)||(45416158-45416237)
chr1 (6-110)||(50533082-50533187)
chr1 (28-106)||(12374488-12374565)
chr1 (9-72)||(18512528-18512593)
chr1 (34-108)||(18607789-18607863)
chr1 (44-110)||(23933058-23933124)
chr1 (28-110)||(35605597-35605679)
chr1 (28-90)||(41998382-41998444)
chr1 (28-110)||(42490384-42490466)
chr1 (28-90)||(45180496-45180557)
chr1 (28-77)||(1604198-1604247)
chr1 (28-77)||(5431013-5431062)
chr1 (34-87)||(39670809-39670862)
chr1 (34-110)||(4865802-4865878)
chr1 (9-54)||(6213491-6213538)
chr1 (13-110)||(21265670-21265769)
chr1 (9-84)||(23973464-23973540)
chr1 (34-98)||(33507894-33507958)
chr1 (9-49)||(47402631-47402671)
[»] chr2 (30 HSPs)
chr2 (34-108)||(3596266-3596340)
chr2 (13-110)||(20919624-20919722)
chr2 (27-110)||(23405210-23405293)
chr2 (13-111)||(2145692-2145792)
chr2 (28-72)||(18254641-18254685)
chr2 (34-110)||(44558017-44558092)
chr2 (28-95)||(17777137-17777204)
chr2 (9-110)||(34107285-34107387)
chr2 (3-106)||(39635318-39635423)
chr2 (9-110)||(28195089-28195190)
chr2 (9-98)||(41246412-41246500)
chr2 (1-110)||(3438962-3439073)
chr2 (34-110)||(13242711-13242787)
chr2 (6-110)||(22653594-22653700)
chr2 (38-108)||(4858686-4858755)
chr2 (28-106)||(15939307-15939385)
chr2 (28-110)||(36748901-36748982)
chr2 (8-57)||(27463657-27463706)
chr2 (62-111)||(32190010-32190059)
chr2 (33-110)||(32609166-32609243)
chr2 (28-69)||(44898456-44898497)
chr2 (62-110)||(1027641-1027689)
chr2 (9-84)||(1244606-1244682)
chr2 (9-72)||(4659460-4659524)
chr2 (28-84)||(5947906-5947962)
chr2 (28-84)||(7717579-7717635)
chr2 (34-110)||(23919457-23919533)
chr2 (28-84)||(32854572-32854628)
chr2 (13-110)||(33228890-33228989)
chr2 (9-110)||(34125760-34125862)
[»] chr7 (46 HSPs)
chr7 (10-106)||(27425106-27425203)
chr7 (7-110)||(7836888-7836992)
chr7 (34-110)||(41331059-41331135)
chr7 (7-110)||(45284771-45284875)
chr7 (32-110)||(28799999-28800077)
chr7 (9-110)||(38151358-38151460)
chr7 (14-110)||(7778955-7779052)
chr7 (10-98)||(28059772-28059861)
chr7 (34-106)||(37411717-37411789)
chr7 (34-110)||(40518869-40518945)
chr7 (28-111)||(48693542-48693625)
chr7 (32-90)||(28800120-28800178)
chr7 (9-72)||(34891258-34891325)
chr7 (9-101)||(10363373-10363466)
chr7 (28-113)||(15639402-15639487)
chr7 (33-110)||(15716664-15716741)
chr7 (33-98)||(22774066-22774131)
chr7 (9-110)||(47440763-47440867)
chr7 (13-110)||(9877224-9877323)
chr7 (13-110)||(23102515-23102614)
chr7 (34-110)||(41465848-41465924)
chr7 (34-110)||(44831602-44831677)
chr7 (28-84)||(46758282-46758338)
chr7 (1-71)||(1649202-1649273)
chr7 (6-98)||(4232553-4232647)
chr7 (28-98)||(10901670-10901741)
chr7 (28-103)||(41535707-41535781)
chr7 (9-106)||(4232297-4232394)
chr7 (38-108)||(4886856-4886924)
chr7 (28-110)||(9712172-9712254)
chr7 (13-110)||(12935754-12935852)
chr7 (33-95)||(27788298-27788360)
chr7 (33-95)||(27791454-27791516)
chr7 (9-110)||(35499551-35499653)
chr7 (35-113)||(39956382-39956460)
chr7 (34-108)||(47437950-47438024)
chr7 (34-111)||(25155554-25155631)
chr7 (13-83)||(43119389-43119461)
chr7 (40-84)||(2366394-2366438)
chr7 (34-110)||(7876013-7876088)
chr7 (38-106)||(10646183-10646251)
chr7 (13-110)||(19752925-19753024)
chr7 (34-110)||(22548225-22548301)
chr7 (13-110)||(35645613-35645712)
chr7 (34-110)||(36931987-36932063)
chr7 (15-110)||(41854011-41854107)
[»] scaffold0031 (1 HSPs)
scaffold0031 (3-77)||(93929-94005)
[»] scaffold0250 (1 HSPs)
scaffold0250 (11-110)||(15019-15119)
[»] scaffold0246 (1 HSPs)
scaffold0246 (13-95)||(24409-24492)
[»] scaffold0257 (1 HSPs)
scaffold0257 (13-110)||(21808-21906)
[»] scaffold0154 (1 HSPs)
scaffold0154 (34-110)||(28801-28877)
[»] scaffold0088 (1 HSPs)
scaffold0088 (13-110)||(10783-10882)
[»] scaffold0068 (1 HSPs)
scaffold0068 (9-110)||(45924-46027)


Alignment Details
Target: chr3 (Bit Score: 132; Significance: 1e-68; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 6 - 216
Target Start/End: Complemental strand, 54897435 - 54897220
Alignment:
Q  6 aaatagtctagtggctagaactcacattttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctacca 105  Q
    |||||||||| |||||||||||||||||||||||||| | ||||| ||||||||||||||||| |||||||  | ||| |||||| |||||||  |||||    
T  54897435 aaatagtctaatggctagaactcacattttaaatgtggaaaagtgaggtgtcaagagttcgaatccctacctctacattaattatgcaatgtccttacca 54897336  T
Q  106 actgaatt-----cacggaaactgaagtaacaacttttagctgttgattttatgttcaacgttacttaatgaattcatttccacgtcaaaagaataaaaa 200  Q
    ||||| ||     ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  54897335 actgagttaagttcacggaaactgaaataacaacttttacctgttgattttatgttcaacgttacttaatgaattcatttccacgtcaaatgaataaaaa 54897236  T
Q  201 ttatacggtgtctctg 216  Q
    ||||||||||||||||    
T  54897235 ttatacggtgtctctg 54897220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 107
Target Start/End: Original strand, 5173968 - 5174063
Alignment:
Q  13 ctagtggctagaactcacatt-ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaac 107  Q
    |||||||||||| ||||||   ||||||||| |||||||||||||   | |||||||||||| ||| |||||||||||| ||||||||||||||||    
T  5173968 ctagtggctagagctcacacaattaaatgtggagaagtggggtgttcggggttcgaacccctgcccctgcataaattatgcaatgtctctaccaac 5174063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 44 - 110
Target Start/End: Original strand, 4227734 - 4227800
Alignment:
Q  44 agaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    ||||||||||||||  ||||||||||||| |||| |||||||||||| ||||||| |||||||||||    
T  4227734 agaagtggggtgtccggagttcgaaccccgacccctgcataaattatgcaatgtccctaccaactga 4227800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 110
Target Start/End: Complemental strand, 24303508 - 24303404
Alignment:
Q  7 aatagtctagtggctagaactcacatt-ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctacca 105  Q
    ||||| |||||||||||| ||||||   ||||||||| ||||||||||||||  | |||||||||||  ||| |||||||||||| ||||||| || |||    
T  24303508 aatagcctagtggctagagctcacacaattaaatgtggagaagtggggtgtccggggttcgaaccccggcccctgcataaattatgcaatgtccctgcca 24303409  T
Q  106 actga 110  Q
    |||||    
T  24303408 actga 24303404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 34 - 110
Target Start/End: Original strand, 49983688 - 49983764
Alignment:
Q  34 ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    |||| |||| |||||| |||||||  | ||||||||||| |||| |||||||||||||||||||| |||||||||||    
T  49983688 ttaattgtggagaagtagggtgtccggggttcgaaccccaacccctgcataaattatacaatgtccctaccaactga 49983764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 34 - 110
Target Start/End: Original strand, 52992039 - 52992115
Alignment:
Q  34 ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    |||||| || |||||||||||||| || ||||||| ||| ||||||||||||||||| |||| || |||||||||||    
T  52992039 ttaaatatggagaagtggggtgtcgagggttcgaatcccgacccttgcataaattatgcaatatccctaccaactga 52992115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 108
Target Start/End: Original strand, 55383866 - 55383942
Alignment:
Q  32 ttttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaact 108  Q
    ||||||||||| ||||||||||||||| | |||||||||||| ||  |||||||||||| ||||||  |||||||||    
T  55383866 ttttaaatgtggagaagtggggtgtcaggggttcgaacccctgcctctgcataaattatgcaatgttcctaccaact 55383942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 44 - 107
Target Start/End: Original strand, 3614070 - 3614133
Alignment:
Q  44 agaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaac 107  Q
    ||||||||||||||| | |||||||||||| ||| |||||||||||| ||||||| ||||||||    
T  3614070 agaagtggggtgtcaggggttcgaacccctgcccctgcataaattatgcaatgtccctaccaac 3614133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 8 - 98
Target Start/End: Complemental strand, 28951833 - 28951742
Alignment:
Q  8 atagtctagtggctagaactcacat-tttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtc 98  Q
    |||| |||||||||||| ||||||  |||||||||||||| ||||||||||  | |||||||||||  ||| |||||||||||| |||||||    
T  28951833 atagcctagtggctagagctcacacatttaaatgtgaagatgtggggtgtctggggttcgaaccccagcccctgcataaattatgcaatgtc 28951742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 2 - 110
Target Start/End: Original strand, 30779513 - 30779623
Alignment:
Q  2 ggttaaatagtctagtggctagaactcacat--tttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtct 99  Q
    |||||| ||| |||||||||||||||||||   || || |||| |||||||||||||| || ||||||||||| |||| |||||| | ||| |||| ||     
T  30779513 ggttaagtagcctagtggctagaactcacacaattaaattgtggagaagtggggtgtccagggttcgaaccccgacccctgcatataatatgcaatatcc 30779612  T
Q  100 ctaccaactga 110  Q
    |||||||||||    
T  30779613 ctaccaactga 30779623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 12 - 110
Target Start/End: Original strand, 49750363 - 49750462
Alignment:
Q  12 tctagtggctagaact-cacattttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    ||||||||||||| || ||||||||||||||||||||||||||||||  || ||||||||||  ||| |||||| | ||| |||| || ||| |||||||    
T  49750363 tctagtggctagagcttcacattttaaatgtgaagaagtggggtgtctggaattcgaaccccagcccctgcatataatatgcaatatccctatcaactga 49750462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 3 - 110
Target Start/End: Original strand, 52309060 - 52309166
Alignment:
Q  3 gttaaatagtctagtggctagaactcacattttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctcta 102  Q
    ||||| ||| ||||||||||||||||||| || ||||||| ||||||||||||||  | ||||||||||| || | |||||| | ||| |||| || |||    
T  52309060 gttaagtagcctagtggctagaactcacaatt-aaatgtggagaagtggggtgtctggggttcgaaccccgactcctgcatatagtatgcaatatcccta 52309158  T
Q  103 ccaactga 110  Q
    ||||||||    
T  52309159 ccaactga 52309166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 102
Target Start/End: Complemental strand, 27837377 - 27837288
Alignment:
Q  13 ctagtggctagaactcacat-tttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctcta 102  Q
    ||||||| |||| ||||||  ||||||||| ||||| |||| ||||  ||||||||||||| |||| ||||||||||||||||||||||||    
T  27837377 ctagtggttagagctcacacatttaaatgt-aagaaatgggatgtccggagttcgaaccccaacccctgcataaattatacaatgtctcta 27837288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 110
Target Start/End: Complemental strand, 29098808 - 29098706
Alignment:
Q  9 tagtctagtggctagaactcacatt-ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaac 107  Q
    ||||||||||||||||||| |||   |||||| || |||| |||||||||  | ||||||||||| |||| |||||| | |||||||| |||||||||||    
T  29098808 tagtctagtggctagaacttacacaattaaatatggagaaatggggtgtccggggttcgaaccccgacccctgcatataatatacaatatctctaccaac 29098709  T
Q  108 tga 110  Q
    |||    
T  29098708 tga 29098706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 110
Target Start/End: Complemental strand, 38949786 - 38949688
Alignment:
Q  13 ctagtggctagaactcacatt-ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    ||||||||| || |||||| | ||||||||| |||||||||||||   | |||||||||||  ||| |||||||||||| ||||||| |||||||||||    
T  38949786 ctagtggctggagctcacactattaaatgtggagaagtggggtgttcggggttcgaaccccggcccctgcataaattatgcaatgtccctaccaactga 38949688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 110
Target Start/End: Complemental strand, 47098632 - 47098530
Alignment:
Q  9 tagtctagtggctagaactcacatt-ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaac 107  Q
    ||||||||||||| || |||||||  ||||||||| ||||||| ||||||  | ||||||||| |  ||| |||||||||||||||||||| ||| ||||    
T  47098632 tagtctagtggctggagctcacataattaaatgtggagaagtgaggtgtctggggttcgaacctcggcccctgcataaattatacaatgtccctatcaac 47098533  T
Q  108 tga 110  Q
    |||    
T  47098532 tga 47098530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 98
Target Start/End: Complemental strand, 26880268 - 26880203
Alignment:
Q  33 tttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtc 98  Q
    |||||||||| ||||||||||||||   |||||||||||| |||| |||||||||||| |||||||    
T  26880268 tttaaatgtggagaagtggggtgtctgaagttcgaaccccgacccctgcataaattatgcaatgtc 26880203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 8497115 - 8497071
Alignment:
Q  28 cacattttaaatgtgaagaagtggggtgtcaagagttcgaacccc 72  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||    
T  8497115 cacattttaaatgtggagaagtggggtgtcaagggttcgaacccc 8497071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 34 - 110
Target Start/End: Original strand, 19222566 - 19222642
Alignment:
Q  34 ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    ||||||||| ||||||||||||||  | |||||||||||  ||| |||||||||||| ||||||| || ||||||||    
T  19222566 ttaaatgtggagaagtggggtgtccggggttcgaaccccggcccctgcataaattatgcaatgtccctgccaactga 19222642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 34 - 110
Target Start/End: Complemental strand, 32401580 - 32401505
Alignment:
Q  34 ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    ||||||||| ||| ||||||||||  | ||||||||||  |||| |||||||||||||||||||| |||||||||||    
T  32401580 ttaaatgtggagatgtggggtgtccggggttcgaacccg-acccctgcataaattatacaatgtccctaccaactga 32401505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 84
Target Start/End: Original strand, 36331710 - 36331784
Alignment:
Q  9 tagtctagtggctagaactcacattttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcata 84  Q
    ||||||||||||||||| |||| ||||||| ||||| ||||||||||||  | ||||||||||| |||| ||||||    
T  36331710 tagtctagtggctagaattcactttttaaa-gtgaataagtggggtgtccggggttcgaaccccgacccctgcata 36331784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 28 - 90
Target Start/End: Original strand, 25883962 - 25884024
Alignment:
Q  28 cacattttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattat 90  Q
    ||||||||||||||| ||||||||||||||  | ||||||||||| |||| |||||| |||||    
T  25883962 cacattttaaatgtggagaagtggggtgtccggggttcgaaccccgacccctgcatatattat 25884024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 49443381 - 49443467
Alignment:
Q  13 ctagtggctagaactcacat-tttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtc 98  Q
    |||||||||||| ||||||  |||||||||| ||||||||||||||  | |||||||| ||  ||| |||||||||||| |||||||    
T  49443381 ctagtggctagagctcacacatttaaatgtggagaagtggggtgtccggggttcgaactccggcccctgcataaattatgcaatgtc 49443467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 73
Target Start/End: Complemental strand, 8488523 - 8488478
Alignment:
Q  28 cacattttaaatgtgaagaagtggggtgtcaagagttcgaacccct 73  Q
    ||||||||||||||| ||||||| ||||||||| ||||||||||||    
T  8488523 cacattttaaatgtggagaagtgaggtgtcaagggttcgaacccct 8488478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 110
Target Start/End: Complemental strand, 44764838 - 44764736
Alignment:
Q  7 aatagtctagtggctagaactcacatt-ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctacca 105  Q
    ||||| |||||||||||| ||||||   ||||||||| |||||||| |||||  | ||||||||||   ||| |||||||||||| ||||||| ||||||    
T  44764838 aatagcctagtggctagagctcacacaattaaatgtggagaagtggagtgtccggggttcgaacccg--cccctgcataaattatgcaatgtccctacca 44764741  T
Q  106 actga 110  Q
    |||||    
T  44764740 actga 44764736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 98
Target Start/End: Complemental strand, 43280174 - 43280094
Alignment:
Q  19 gctagaactcacat-tttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtc 98  Q
    |||||||||||||  |||||||||| ||||||||||||||  |  ||||||||||  ||| |||||||||||| |||||||    
T  43280174 gctagaactcacacatttaaatgtggagaagtggggtgtccgggattcgaaccccggcccctgcataaattatgcaatgtc 43280094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 110
Target Start/End: Complemental strand, 45647393 - 45647317
Alignment:
Q  34 ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    |||||| |||||||||| ||||||  | |||||||||||  ||| ||||||  |||||||||||| |||||||||||    
T  45647393 ttaaatatgaagaagtgaggtgtccggggttcgaaccccgccccctgcatattttatacaatgtccctaccaactga 45647317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 110
Target Start/End: Original strand, 50675699 - 50675798
Alignment:
Q  13 ctagtggctagaactcacat--tttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    |||||||||||| ||||||   ||||| |||| |||||||||||||| |||||||||||| | |||| || ||| | ||| |||| || |||||||||||    
T  50675699 ctagtggctagagctcacacaatttaattgtggagaagtggggtgtccagagttcgaaccacaacccctgtatataatatgcaatatccctaccaactga 50675798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 77
Target Start/End: Original strand, 31902185 - 31902256
Alignment:
Q  6 aaatagtctagtggctagaactcacattttaaatgtgaagaagtggggtgtcaagagttcgaacccctaccc 77  Q
    ||||||||||||||||| || | || |||| || ||||| ||||||||||||  ||||||||||||| ||||    
T  31902185 aaatagtctagtggctaaaatttacctttttaaggtgaataagtggggtgtccggagttcgaaccccgaccc 31902256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 53986493 - 53986556
Alignment:
Q  9 tagtctagtggctagaactcaca-ttttaaatgtgaagaagtggggtgtcaagagttcgaaccc 71  Q
    ||||||||||||| ||||||||| |||| |||||| ||||||||||||||  | ||||||||||    
T  53986493 tagtctagtggctggaactcacattttttaatgtggagaagtggggtgtccggggttcgaaccc 53986556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 110
Target Start/End: Complemental strand, 2106120 - 2106038
Alignment:
Q  28 cacattttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    |||||||||||||||||||| | || ||||  |  |||||||||| |||| |||||| | ||| ||||||||||| |||||||    
T  2106120 cacattttaaatgtgaagaaataggatgtccggtattcgaaccccgacccctgcatataatatgcaatgtctctatcaactga 2106038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 84
Target Start/End: Complemental strand, 17729108 - 17729031
Alignment:
Q  9 tagtctagtggctagaactcacat--tttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcata 84  Q
    |||||||||||||||| ||||||   ||||| |||| |||||||| ||||| || ||||||||||| |||| ||||||    
T  17729108 tagtctagtggctagagctcacacaatttaattgtggagaagtggagtgtccagggttcgaaccccgacccctgcata 17729031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 84
Target Start/End: Complemental strand, 19030337 - 19030260
Alignment:
Q  9 tagtctagtggctagaactcacat--tttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcata 84  Q
    |||||||||||||||| ||||||   ||||| |||| |||||||| ||||| || ||||||||||| |||| ||||||    
T  19030337 tagtctagtggctagagctcacacaatttaattgtggagaagtggagtgtccagggttcgaaccccgacccctgcata 19030260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 110
Target Start/End: Original strand, 22472288 - 22472370
Alignment:
Q  28 cacattttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    |||| ||||| |||| ||||||||||||||  | |||||||||||  | |||||||| | ||| |||| ||||||||||||||    
T  22472288 cacaatttaattgtggagaagtggggtgtccggggttcgaaccccggctcttgcatataatatgcaatatctctaccaactga 22472370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 110
Target Start/End: Complemental strand, 32776291 - 32776225
Alignment:
Q  44 agaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    ||||||| ||||||  | |||||||||||  ||| |||||||||||| ||||||| |||||||||||    
T  32776291 agaagtgaggtgtccggggttcgaaccccggcccctgcataaattatgcaatgtccctaccaactga 32776225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 110
Target Start/End: Original strand, 48515343 - 48515441
Alignment:
Q  13 ctagtggctagaactcacat-tttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    ||||||||||||  |||||  |||||||||| ||||||| ||||||  | ||||||||| | |||| ||||||||||||  ||| || |||||||||||    
T  48515343 ctagtggctagagttcacacatttaaatgtggagaagtgtggtgtccggggttcgaacctcgacccctgcataaattatggaatatccctaccaactga 48515441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 110
Target Start/End: Original strand, 49375643 - 49375737
Alignment:
Q  17 tggctagaactcacatt-ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    ||||||||||||||||  |||||||||  ||||||| |||||  | |||||||| ||  ||| ||||||||||||  |||||| |||||||||||    
T  49375643 tggctagaactcacataattaaatgtggtgaagtggagtgtccggggttcgaacgccagcccctgcataaattatgtaatgtccctaccaactga 49375737  T

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Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 110
Target Start/End: Original strand, 29559630 - 29559730
Alignment:
Q  12 tctagtggctagaactcaca--ttttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactg 109  Q
    |||||||| |||||||||||  ||||||||||| ||||||||||||||   ||||| |||||| |||  | |||| | ||| |||| || ||||||||||    
T  29559630 tctagtggatagaactcacacattttaaatgtggagaagtggggtgtccgaagttcaaaccccgacctctacatataatatgcaatatccctaccaactg 29559729  T
Q  110 a 110  Q
    |    
T  29559730 a 29559730  T

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Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 111
Target Start/End: Original strand, 34102568 - 34102668
Alignment:
Q  13 ctagtggctagaactcacat--tttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    |||||||||||| ||||||   ||||| |||| ||||||||||||||  | |||||||||||  ||| |||||| | ||| |||| || |||||||||||    
T  34102568 ctagtggctagagctcacacagtttaattgtggagaagtggggtgtccggggttcgaaccccggcccctgcatataatatgcaatatccctaccaactga 34102667  T
Q  111 a 111  Q
    |    
T  34102668 a 34102668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 110
Target Start/End: Complemental strand, 42785985 - 42785908
Alignment:
Q  33 tttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    |||||| ||| |||||| ||||||| || ||||||||||| |||| |||||||| |||| ||| ||  ||||||||||    
T  42785985 tttaaacgtggagaagtagggtgtccagggttcgaaccccgacccctgcataaaatatataatatccttaccaactga 42785908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 46844950 - 46845015
Alignment:
Q  33 tttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtc 98  Q
    |||||||||| |||||| |||||||  | |||||||| || |||| |||||||||||| |||||||    
T  46844950 tttaaatgtggagaagtagggtgtccggggttcgaactccgacccctgcataaattatgcaatgtc 46845015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 110
Target Start/End: Complemental strand, 11436617 - 11436518
Alignment:
Q  13 ctagtggctagaactcacat--tttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    ||||||| |||||||||||   ||||| |||| |||||||||||||| || ||||||||| |  ||| |||||| | ||| |||| || |||||||||||    
T  11436617 ctagtggttagaactcacacaatttaattgtggagaagtggggtgtccagggttcgaaccacggcccctgcatataatatgcaatatccctaccaactga 11436518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 107
Target Start/End: Complemental strand, 12737037 - 12736993
Alignment:
Q  63 ttcgaacccctacccttgcataaattatacaatgtctctaccaac 107  Q
    |||||||| | ||||||||||| | ||||||||||||||||||||    
T  12737037 ttcgaaccacgacccttgcatataatatacaatgtctctaccaac 12736993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 107
Target Start/End: Complemental strand, 12737663 - 12737619
Alignment:
Q  63 ttcgaacccctacccttgcataaattatacaatgtctctaccaac 107  Q
    |||||||| | ||||||||||| | ||||||||||||||||||||    
T  12737663 ttcgaaccacgacccttgcatataatatacaatgtctctaccaac 12737619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 108
Target Start/End: Complemental strand, 14795207 - 14795127
Alignment:
Q  28 cacattttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaact 108  Q
    ||||||||||||||| ||||||||||||||  | ||| ||||||   | | |||||| ||||| ||||||| |||||||||    
T  14795207 cacattttaaatgtggagaagtggggtgtccggggtttgaaccctggcacctgcatatattatgcaatgtcactaccaact 14795127  T

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Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 110
Target Start/End: Complemental strand, 15491935 - 15491867
Alignment:
Q  42 gaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    ||||||||||||||||  | ||||||||||| |||| |||||| | ||| |||| | ||||||||||||    
T  15491935 gaagaagtggggtgtctggggttcgaaccccaacccctgcatataatatgcaatatttctaccaactga 15491867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 78
Target Start/End: Original strand, 16231845 - 16231916
Alignment:
Q  9 tagtctagtggctagaactc--acattttaaatgtgaagaagtggggtgtcaagagttcgaacccctaccct 78  Q
    ||||||||||||| || |||  ||||||||||| || ||||||||||| || || ||||||||||| |||||    
T  16231845 tagtctagtggctggagctcgcacattttaaatatggagaagtggggtatctagggttcgaaccccgaccct 16231916  T

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Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 18764820 - 18764911
Alignment:
Q  7 aatagtctagtggctagaactcacat-tttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtc 98  Q
    ||||| |||||||||||| ||||||  |||||||||  ||||||||| |||| || ||||||||||  |||  |||||||||||| |||||||    
T  18764820 aatagcctagtggctagagctcacacatttaaatgtagagaagtggg-tgtccagtgttcgaaccctgaccactgcataaattatgcaatgtc 18764911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 27329906 - 27329950
Alignment:
Q  28 cacattttaaatgtgaagaagtggggtgtcaagagttcgaacccc 72  Q
    ||||||||||||||| ||||||||||||||  | |||||||||||    
T  27329906 cacattttaaatgtggagaagtggggtgtccggggttcgaacccc 27329950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 31528903 - 31529014
Alignment:
Q  1 tggttaaatagtctagtggctagaactca--cattttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtc 98  Q
    |||| |||||| |||||||||||| ||||  || ||||| |||| |||||||| |||||  | ||||||||||| || | |||||| | ||| |||| ||    
T  31528903 tggtcaaatagcctagtggctagagctcatacaatttaattgtggagaagtggagtgtccggggttcgaaccccgactcctgcatataatattcaatatc 31529002  T
Q  99 tctaccaactga 110  Q
     |||||||||||    
T  31529003 cctaccaactga 31529014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 110
Target Start/End: Complemental strand, 39720048 - 39719949
Alignment:
Q  13 ctagtggctagaactcacat--tttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    |||||||||||| ||||||   ||||| |||| ||||||||||||||  | |||||||||||  ||| |||||| | ||| |||| || |||||||||||    
T  39720048 ctagtggctagagctcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccggcccctgcatataatatgcaatatccctaccaactga 39719949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 110
Target Start/End: Original strand, 41936364 - 41936463
Alignment:
Q  13 ctagtggctagaactcacat--tttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    |||||||||||| ||||||   ||||| |||| ||||||||||||||  | |||||||||||  ||| |||||| | ||| |||| || |||||||||||    
T  41936364 ctagtggctagagctcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccggcccctgcatataatatgcaatatccctaccaactga 41936463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 44625199 - 44625243
Alignment:
Q  28 cacattttaaatgtgaagaagtggggtgtcaagagttcgaacccc 72  Q
    ||||||||||||||| ||||||||||||||  | |||||||||||    
T  44625199 cacattttaaatgtggagaagtggggtgtccggggttcgaacccc 44625243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 110
Target Start/End: Original strand, 48739697 - 48739800
Alignment:
Q  9 tagtctagtggctagaactcacat--tttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaa 106  Q
    |||||||||||||||| ||||||   ||||| |||| ||||||||||||||  | |||||||||||  ||| |||||| |  || |||| || |||||||    
T  48739697 tagtctagtggctagagctcacacagtttaattgtggagaagtggggtgtctggggttcgaaccccagcccctgcatataaaatgcaatatccctaccaa 48739796  T
Q  107 ctga 110  Q
    ||||    
T  48739797 ctga 48739800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 51879191 - 51879147
Alignment:
Q  28 cacattttaaatgtgaagaagtggggtgtcaagagttcgaacccc 72  Q
    ||||||||||||||| ||||||||||||||  | |||||||||||    
T  51879191 cacattttaaatgtggagaagtggggtgtccggggttcgaacccc 51879147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 110
Target Start/End: Complemental strand, 52089375 - 52089327
Alignment:
Q  62 gttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    ||||||||||| | ||||||||| |||||| | ||||||||||||||||    
T  52089375 gttcgaaccccaaaccttgcatatattatatattgtctctaccaactga 52089327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 110
Target Start/End: Original strand, 53432694 - 53432793
Alignment:
Q  13 ctagtggctagaactcacat--tttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    |||||||||||| ||||||   ||||| |||| ||||||||||||||  | |||||||||||  ||| |||||| | ||| |||| || |||||||||||    
T  53432694 ctagtggctagagctcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccggcccctgcatataatatgcaatatccctaccaactga 53432793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 2e-20; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 28 - 110
Target Start/End: Original strand, 13059151 - 13059233
Alignment:
Q  28 cacattttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    ||||||||||||||| ||||||||||||||| | |||||||||||| ||| |||||||||||| || |||| |||||||||||    
T  13059151 cacattttaaatgtggagaagtggggtgtcaggggttcgaacccctgcccctgcataaattatgcattgtccctaccaactga 13059233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 9 - 110
Target Start/End: Original strand, 17499043 - 17499146
Alignment:
Q  9 tagtctagtggctagaact--cacattttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaa 106  Q
    |||||||||||||||| ||  |||||||||||||||  |||||||||||||||  ||| |||||||| | | |||||||||||| ||||||| |||||||    
T  17499043 tagtctagtggctagagctgacacattttaaatgtggggaagtggggtgtcaatggtttgaacccctgctcctgcataaattatgcaatgtccctaccaa 17499142  T
Q  107 ctga 110  Q
    ||||    
T  17499143 ctga 17499146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 9 - 110
Target Start/End: Original strand, 24480774 - 24480877
Alignment:
Q  9 tagtctagtggctagaactcacat--tttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaa 106  Q
    |||||||||||||||| |||||||  ||||| |||| |||||||||||||| |  |||||||||||  ||| |||||| | |||||||| ||||||||||    
T  24480774 tagtctagtggctagagctcacataatttaattgtggagaagtggggtgtccaaggttcgaaccccagcccctgcatataatatacaatatctctaccaa 24480873  T
Q  107 ctga 110  Q
    ||||    
T  24480874 ctga 24480877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 31 - 110
Target Start/End: Complemental strand, 42023503 - 42023425
Alignment:
Q  31 attttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    |||||||||||| ||||||||| ||||| | |||| |||| |||||| |||||||||||| ||||||| |||||||||||    
T  42023503 attttaaatgtggagaagtgggatgtcaggggttcaaacctctacccctgcataaattatgcaatgtc-ctaccaactga 42023425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 110
Target Start/End: Complemental strand, 12770484 - 12770382
Alignment:
Q  9 tagtctagtggctagaactcacatt-ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaac 107  Q
    |||||| ||||||||| ||||||   ||||||||| ||||||||||||||  | |||||||||||  ||| |||||||||||| ||||||| ||| ||||    
T  12770484 tagtctggtggctagagctcacacaattaaatgtggagaagtggggtgtccggggttcgaaccccggcccctgcataaattatgcaatgtccctatcaac 12770385  T
Q  108 tga 110  Q
    |||    
T  12770384 tga 12770382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 28 - 110
Target Start/End: Complemental strand, 13105187 - 13105105
Alignment:
Q  28 cacattttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    ||||||||||||||| ||||||||||||||    |||||||||||  |||||||||| ||||| || |||| |||||||||||    
T  13105187 cacattttaaatgtggagaagtggggtgtctgaggttcgaaccccggcccttgcatatattatgcattgtccctaccaactga 13105105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 28 - 110
Target Start/End: Original strand, 23339870 - 23339952
Alignment:
Q  28 cacattttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    |||| ||||| ||||||||||||||||||| || |||||||||||  ||| | |||| | |||||||| ||||||||||||||    
T  23339870 cacaatttaattgtgaagaagtggggtgtccagggttcgaaccccggcccctacatataatatacaatatctctaccaactga 23339952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 44 - 106
Target Start/End: Original strand, 25824892 - 25824954
Alignment:
Q  44 agaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaa 106  Q
    ||||||||||||||  | ||||||||||| ||||||||||||||||| ||||||| |||||||    
T  25824892 agaagtggggtgtctggggttcgaaccccgacccttgcataaattatgcaatgtccctaccaa 25824954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 34 - 108
Target Start/End: Original strand, 25890384 - 25890458
Alignment:
Q  34 ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaact 108  Q
    |||| |||| ||||||||||||||  | |||||||||||  |||||||||||||||| ||||||| |||||||||    
T  25890384 ttaattgtggagaagtggggtgtccggggttcgaaccccggcccttgcataaattatgcaatgtccctaccaact 25890458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 108
Target Start/End: Complemental strand, 36359083 - 36358983
Alignment:
Q  9 tagtctagtggctagaactcaca--ttttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaa 106  Q
    |||||||||||||||| ||||||  ||||||| ||||||||||| ||||||| | ||||||| |||| |||  ||||||||||| |||| || |||||||    
T  36359083 tagtctagtggctagagctcacacattttaaaggtgaagaagtgcggtgtcaggggttcgaatccctgccc-cgcataaattatgcaatatccctaccaa 36358985  T
Q  107 ct 108  Q
    ||    
T  36358984 ct 36358983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 33 - 103
Target Start/End: Complemental strand, 41272185 - 41272115
Alignment:
Q  33 tttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctac 103  Q
    |||||||||| |||||||| ||||| ||||||||||||||  ||| |||||||||||| ||||||| ||||    
T  41272185 tttaaatgtggagaagtggtgtgtccagagttcgaaccccagcccctgcataaattatgcaatgtccctac 41272115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 106
Target Start/End: Original strand, 6851005 - 6851078
Alignment:
Q  33 tttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaa 106  Q
    |||||||||| ||||||  ||||||  | ||||||| |||||||| |||||||||||| |||||||||||||||    
T  6851005 tttaaatgtggagaagtaaggtgtccggggttcgaatccctacccctgcataaattatgcaatgtctctaccaa 6851078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 34 - 110
Target Start/End: Complemental strand, 481101 - 481025
Alignment:
Q  34 ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    ||||||||| ||||||||||||||  | ||||||||| |  ||| |||||||||||| ||||||| |||||||||||    
T  481101 ttaaatgtggagaagtggggtgtccggggttcgaaccgcggcccctgcataaattatgcaatgtccctaccaactga 481025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 34 - 110
Target Start/End: Complemental strand, 38283214 - 38283138
Alignment:
Q  34 ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    ||||||||| ||||||||||||||  | |||||||||||  ||| ||||||||||||| |||||| || ||||||||    
T  38283214 ttaaatgtggagaagtggggtgtctggggttcgaaccccggcccctgcataaattatataatgtccctgccaactga 38283138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 84
Target Start/End: Original strand, 39674012 - 39674088
Alignment:
Q  9 tagtctagtggctagaactcacatt-ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcata 84  Q
    |||||||||||||||| |||| |   |||||||||||||||||||||||| || ||||||||||| |||| ||||||    
T  39674012 tagtctagtggctagagctcatacaattaaatgtgaagaagtggggtgtccagggttcgaaccccaacccctgcata 39674088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 34 - 106
Target Start/End: Complemental strand, 44156801 - 44156730
Alignment:
Q  34 ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaa 106  Q
    ||||||||||||||| |||||||| || |||||||| ||  ||| |||||||||||| |||||||||||||||    
T  44156801 ttaaatgtgaagaag-ggggtgtccagggttcgaactccgtcccctgcataaattatgcaatgtctctaccaa 44156730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 110
Target Start/End: Complemental strand, 18412668 - 18412570
Alignment:
Q  13 ctagtggctagaactcacatt-ttaaatgtgaagaagtggggtgtcaaga-gttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    ||||||| ||||||||||||  |||||||||||||| ||| |||| | || |||||||| || |||| |||||||||||| ||||||| |||||||||||    
T  18412668 ctagtggttagaactcacataattaaatgtgaagaaatggagtgt-acgatgttcgaactccgacccctgcataaattatgcaatgtccctaccaactga 18412570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 29499692 - 29499649
Alignment:
Q  9 tagtctagtggctagaactcacattttaaatgtgaagaagtggg 52  Q
    |||||||||||||||| ||||||||||||||||| |||||||||    
T  29499692 tagtctagtggctagagctcacattttaaatgtggagaagtggg 29499649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 8698526 - 8698636
Alignment:
Q  1 tggttaaatagtctagtggctagaactcacat-tttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtct 99  Q
    |||| ||||||| || ||| |||| ||||||| |||||||||||||||||||||||||  |  |||||||||| |||| | |||| | ||| |||| ||     
T  8698526 tggtcaaatagtttaatggttagagctcacatatttaaatgtgaagaagtggggtgtccgggattcgaaccccaacccctacatataatatgcaatatcc 8698625  T
Q  100 ctaccaactga 110  Q
    |||||||||||    
T  8698626 ctaccaactga 8698636  T

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Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 110
Target Start/End: Complemental strand, 5333038 - 5332930
Alignment:
Q  4 ttaaatagtctagtggctagaactcacat--tttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctct 101  Q
    |||| |||||||||||||||| ||||||   ||||| |||| |||||||| |||||  | ||||||||||| || | |||||| | |||| ||| |||||    
T  5333038 ttaagtagtctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccgactcctgcatataatatataatatctct 5332939  T
Q  102 accaactga 110  Q
    |||||||||    
T  5332938 accaactga 5332930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 84
Target Start/End: Complemental strand, 34873206 - 34873126
Alignment:
Q  6 aaatagtctagtggctagaactcaca--ttttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcata 84  Q
    |||||||||||||||| || ||||||  ||||||||||| ||||||||||||||    ||||||||||| |||| ||||||    
T  34873206 aaatagtctagtggctggagctcacacattttaaatgtggagaagtggggtgtccgaggttcgaaccccgacccctgcata 34873126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 43847047 - 43846962
Alignment:
Q  13 ctagtggctagaactcacatt-ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgt 97  Q
    |||||||||||| ||||||   ||||||||| |||||||||||||| || ||||||||  | |||| |||||||||||| ||||||    
T  43847047 ctagtggctagagctcacacaattaaatgtggagaagtggggtgtccagggttcgaacatcgacccctgcataaattatgcaatgt 43846962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 108
Target Start/End: Complemental strand, 550392 - 550317
Alignment:
Q  33 tttaaatgtgaagaagtggggtgt-caagagttcgaacccctacccttgcataaattatacaatgtctctaccaact 108  Q
    ||||||||||||||||||| |||| | ||| |||||||||| |||| |||||||||||| ||||||| || ||||||    
T  550392 tttaaatgtgaagaagtggagtgttcgaga-ttcgaaccccgacccctgcataaattatgcaatgtccctgccaact 550317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 110
Target Start/End: Original strand, 8034369 - 8034468
Alignment:
Q  13 ctagtggctagaactcacat--tttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    |||||||||||||||||||   ||||| |||| ||||||||||||||  | |||||||||||  ||| |||||| | ||| |||| || |||||||||||    
T  8034369 ctagtggctagaactcacacaatttaattgtggagaagtggggtgtctggtgttcgaaccccggcccctgcatataatatgcaatatccctaccaactga 8034468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 57
Target Start/End: Complemental strand, 34761082 - 34761034
Alignment:
Q  9 tagtctagtggctagaactcacattttaaatgtgaagaagtggggtgtc 57  Q
    |||||||||| |||||||||||||||||||| ||  |||||||||||||    
T  34761082 tagtctagtgactagaactcacattttaaatatggtgaagtggggtgtc 34761034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 84
Target Start/End: Complemental strand, 5571011 - 5570934
Alignment:
Q  9 tagtctagtggctagaactcacat--tttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcata 84  Q
    |||||||||||||||| |||||||  ||||| |||| ||||||||||||||  | |||||||| || |||| ||||||    
T  5571011 tagtctagtggctagagctcacataatttaattgtggagaagtggggtgtccggggttcgaactccgacccctgcata 5570934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 110
Target Start/End: Original strand, 9814735 - 9814769
Alignment:
Q  76 ccttgcataaattatacaatgtctctaccaactga 110  Q
    |||| ||||||||||||||||||||||||||||||    
T  9814735 ccttacataaattatacaatgtctctaccaactga 9814769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 110
Target Start/End: Complemental strand, 10083279 - 10083177
Alignment:
Q  9 tagtctagtggctagaactcacattt-taaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaac 107  Q
    |||||||||||||||| ||||||  | ||||| || ||||||||||||||  | ||||||||| | |||| |||||| | ||| |||| || ||||||||    
T  10083279 tagtctagtggctagagctcacacatataaatatggagaagtggggtgtccggggttcgaacctcgacccctgcatataatatgcaatatccctaccaac 10083180  T
Q  108 tga 110  Q
    |||    
T  10083179 tga 10083177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 110
Target Start/End: Original strand, 20894704 - 20894754
Alignment:
Q  60 gagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    |||||||||||||  |||||||||||||||| ||||||| || ||||||||    
T  20894704 gagttcgaaccccggcccttgcataaattatgcaatgtccctgccaactga 20894754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 110
Target Start/End: Complemental strand, 24517391 - 24517309
Alignment:
Q  28 cacattttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    |||||||||||| || ||||||||| ||  | | |||||||||||| | | ||||||||| || ||||||| |||||||||||    
T  24517391 cacattttaaatatgcagaagtgggatggtaggggttcgaacccctgctcctgcataaatcatgcaatgtccctaccaactga 24517309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 110
Target Start/End: Original strand, 20540057 - 20540162
Alignment:
Q  6 aaatagtctagtggctagaactcaca-ttttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctacc 104  Q
    ||||||||||||||||||||||||||  | ||||| ||||||| || ||||||  || ||||||||||  ||| |||||| | ||| |||| || ||| |    
T  20540057 aaatagtctagtggctagaactcacacatataaatatgaagaaatgtggtgtccggaattcgaaccccagcccctgcatataatatgcaatatccctaac 20540156  T
Q  105 aactga 110  Q
    ||||||    
T  20540157 aactga 20540162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 81 - 110
Target Start/End: Original strand, 30676331 - 30676360
Alignment:
Q  81 cataaattatacaatgtctctaccaactga 110  Q
    ||||||||||||||||||||||||||||||    
T  30676331 cataaattatacaatgtctctaccaactga 30676360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 110
Target Start/End: Complemental strand, 39362378 - 39362279
Alignment:
Q  14 tagtggctagaactcaca---ttttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    ||||||||||||||||||   |||| |||||| ||||||||||||||  | |||||||| || |||  |||||| | ||| |||| || |||||||||||    
T  39362378 tagtggctagaactcacacattttttaatgtggagaagtggggtgtctggggttcgaactccaacctctgcatataatatgcaatatccctaccaactga 39362279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 110
Target Start/End: Complemental strand, 2114973 - 2114898
Alignment:
Q  34 ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    ||||||||| ||||||||||||||  |||||||||||    |||||||||||| |||  | ||||||||||||||||    
T  2114973 ttaaatgtggagaagtggggtgtccggagttcgaacctgg-cccttgcataaaatatgtattgtctctaccaactga 2114898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 108
Target Start/End: Original strand, 2908049 - 2908145
Alignment:
Q  13 ctagtggctagaactcacat-tttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaact 108  Q
    |||||||||||| ||||||  ||| |||| | |||||||||||||| || |||||||||||  ||| |||||| ||||| || |||| |||| ||||    
T  2908049 ctagtggctagagctcacacattttaatgcggagaagtggggtgtccagggttcgaaccccggcccctgcatatattatgcattgtccctactaact 2908145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 110
Target Start/End: Original strand, 5328524 - 5328623
Alignment:
Q  13 ctagtggctagaactcaca--ttttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    |||||||||||| ||||||  |||||| |||| ||||||| ||||||  | |||||||||||  ||| |||||| | ||| |||| || |||||||||||    
T  5328524 ctagtggctagagctcacacattttaattgtggagaagtgaggtgtccggggttcgaaccccggcccctgcatataatatgcaatatccctaccaactga 5328623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 110
Target Start/End: Complemental strand, 26797047 - 26796972
Alignment:
Q  34 ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    ||||||||||||||||||||||||  || |||||||| |   || |||||||| ||| ||||||| |||||||||||    
T  26797047 ttaaatgtgaagaagtggggtgtc-cgaattcgaacctcagtccctgcataaaatatgcaatgtccctaccaactga 26796972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 111
Target Start/End: Complemental strand, 27977094 - 27977014
Alignment:
Q  31 attttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactgaa 111  Q
    |||| ||||||||||||||| | ||||    ||||||||||| | || |||||| |||||| |||||||||||||| ||||    
T  27977094 atttaaaatgtgaagaagtgtgttgtctgaggttcgaaccccaatccctgcatatattatataatgtctctaccaattgaa 27977014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 111
Target Start/End: Complemental strand, 28034363 - 28034283
Alignment:
Q  31 attttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactgaa 111  Q
    |||| ||||||||||||||| | ||||    ||||||||||| | || |||||| |||||| |||||||||||||| ||||    
T  28034363 atttaaaatgtgaagaagtgtgttgtctgaggttcgaaccccaatccctgcatatattatataatgtctctaccaattgaa 28034283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 31024390 - 31024346
Alignment:
Q  28 cacattttaaatgtgaagaagtggggtgtcaagagttcgaacccc 72  Q
    ||||||||||||||| ||||||||||||||  | |||||||||||    
T  31024390 cacattttaaatgtggagaagtggggtgtccggggttcgaacccc 31024346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 110
Target Start/End: Complemental strand, 34894482 - 34894383
Alignment:
Q  13 ctagtggctagaactcacat--tttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    |||||||||||| ||||||   ||||| |||| ||||||||||||||  | |||||||||||  ||| |||||| | ||| |||| || |||||||||||    
T  34894482 ctagtggctagagctcacacaatttaactgtggagaagtggggtgtccggggttcgaaccccggcccctgcatataatatgcaatatccctaccaactga 34894383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 84
Target Start/End: Original strand, 36035153 - 36035209
Alignment:
Q  28 cacattttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcata 84  Q
    ||||||||||||||| ||||||||||||||    ||||||||||| |||| ||||||    
T  36035153 cacattttaaatgtggagaagtggggtgtccgaggttcgaaccccgacccctgcata 36035209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 2e-20; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 28 - 98
Target Start/End: Complemental strand, 7443435 - 7443365
Alignment:
Q  28 cacattttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtc 98  Q
    |||||| |||||||| ||||||||||||||||| |||||||||||| ||| ||||||||||||||||||||    
T  7443435 cacattataaatgtggagaagtggggtgtcaagggttcgaacccctgcccctgcataaattatacaatgtc 7443365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 6 - 110
Target Start/End: Original strand, 39799980 - 39800086
Alignment:
Q  6 aaatagtctagtggctagaactcaca--ttttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctac 103  Q
    ||||||||||||||||  | ||||||  ||||||||||| ||||||||||||||| | |||||| ||||| ||| |||||||||||| || |||| ||||    
T  39799980 aaatagtctagtggctgaagctcacacattttaaatgtggagaagtggggtgtcaggggttcgagcccctgcccctgcataaattatgcattgtccctac 39800079  T
Q  104 caactga 110  Q
    |||||||    
T  39800080 caactga 39800086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 110
Target Start/End: Complemental strand, 8241146 - 8241064
Alignment:
Q  28 cacattttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    ||||||||||||||| ||||||||||||||  | ||||||||||| ||||||||||| | ||| |||| || |||||||||||    
T  8241146 cacattttaaatgtggagaagtggggtgtccggggttcgaaccccgacccttgcatataatatgcaatatccctaccaactga 8241064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 110
Target Start/End: Original strand, 41083492 - 41083593
Alignment:
Q  9 tagtctagtggctagaactcacatt-ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaac 107  Q
    |||||||||||||||| ||| ||   ||||| ||| ||||||||||||||  || |||||||||| |||| |||||||||||| ||||||||||||||||    
T  41083492 tagtctagtggctagagctcccaaaattaaacgtggagaagtggggtgtccgga-ttcgaaccccgacccctgcataaattatgcaatgtctctaccaac 41083590  T
Q  108 tga 110  Q
    |||    
T  41083591 tga 41083593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 6167335 - 6167224
Alignment:
Q  3 gttaaatagtctagtggctagaactcaca--ttttaaatgtgaagaagtggggtgtcaa--gagttcgaacccctacccttgcataaattatacaatgtc 98  Q
    ||||| ||| |||||||||||| ||||||  ||||||||||| ||||||| |||||||   | |||||||||||| ||| |||||||||||| |||||||    
T  6167335 gttaagtagcctagtggctagagctcacacattttaaatgtggagaagtgaggtgtcatatgtgttcgaacccctgcccctgcataaattatgcaatgtc 6167236  T
Q  99 tctaccaactga 110  Q
     || ||||||||    
T  6167235 cctgccaactga 6167224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 34 - 111
Target Start/End: Complemental strand, 32550266 - 32550189
Alignment:
Q  34 ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactgaa 111  Q
    ||||||||| || ||||||||||   | |||||||||||| ||| |||||||||||| ||||||||||||||||||||    
T  32550266 ttaaatgtggagtagtggggtgtacggggttcgaacccctgcccatgcataaattatgcaatgtctctaccaactgaa 32550189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 34 - 110
Target Start/End: Original strand, 436541 - 436617
Alignment:
Q  34 ttaaatgtgaagaagtggggtgt-caagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    |||||||||| |||||| ||||| | ||| |||||||| | ||||||||||||||||||||||||| |||||||||||    
T  436541 ttaaatgtgatgaagtgaggtgttcgaga-ttcgaaccgcgacccttgcataaattatacaatgtccctaccaactga 436617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 110
Target Start/End: Complemental strand, 5966944 - 5966843
Alignment:
Q  9 tagtctagtggctagaactcacattttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaact 108  Q
    ||||||||||||||||||||||| ||||| |||| |||||||| |||||  | |||||||||||  | | |||||| | ||| |||| || |||||||||    
T  5966944 tagtctagtggctagaactcacaatttaattgtggagaagtggagtgtccggggttcgaaccccggctcctgcatataatatgcaatatccctaccaact 5966845  T
Q  109 ga 110  Q
    ||    
T  5966844 ga 5966843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 26 - 110
Target Start/End: Complemental strand, 39777856 - 39777772
Alignment:
Q  26 ctcacattttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    ||||||||||||||||| ||||||| ||| |||   |||| |||||||  |  |||||||||||||||||||| |||||||||||    
T  39777856 ctcacattttaaatgtggagaagtgaggtatcagaggttcaaacccctgtcactgcataaattatacaatgtccctaccaactga 39777772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 9 - 110
Target Start/End: Complemental strand, 3198443 - 3198341
Alignment:
Q  9 tagtctagtggctagaactcacatt-ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaac 107  Q
    ||||||||||||  || |||||||  ||||||||| |||||| |||||||  | ||||||||| | |||| |||||| ||||| ||||||| ||||||||    
T  3198443 tagtctagtggcgggacctcacataattaaatgtggagaagtagggtgtccggggttcgaacctcaacccctgcatatattatgcaatgtccctaccaac 3198344  T
Q  108 tga 110  Q
    |||    
T  3198343 tga 3198341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 32 - 106
Target Start/End: Complemental strand, 18890418 - 18890345
Alignment:
Q  32 ttttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaa 106  Q
    ||||||||||| ||||||||||||||  | ||||||||||| |||| |||||| ||||| |||||||| ||||||    
T  18890418 ttttaaatgtggagaagtggggtgtcctgtgttcgaacccc-acccatgcatatattatgcaatgtctataccaa 18890345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 34 - 108
Target Start/End: Original strand, 20145544 - 20145618
Alignment:
Q  34 ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaact 108  Q
    ||||||||| ||||||||||||||    |||||||||||  |||||||||||||||| |||| || |||||||||    
T  20145544 ttaaatgtggagaagtggggtgtccgaggttcgaaccccggcccttgcataaattatgcaatatccctaccaact 20145618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 9 - 110
Target Start/End: Original strand, 28822710 - 28822812
Alignment:
Q  9 tagtctagtggctagaactcacatt-ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaac 107  Q
    ||||||||||| | || |||||||| |||||| || |||||||||||||   | ||||||| ||| | |  |||||||||||||||||||| ||||||||    
T  28822710 tagtctagtggttggagctcacattattaaatatggagaagtggggtgttcggggttcgaatcccgatctctgcataaattatacaatgtccctaccaac 28822809  T
Q  108 tga 110  Q
    |||    
T  28822810 tga 28822812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 110
Target Start/End: Complemental strand, 12474097 - 12473996
Alignment:
Q  9 tagtctagtggctagaactcacattttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaact 108  Q
    ||||||||||| |||| ||||||   | |||||| |||||||||||||   ||||||||||  |  ||| |||||||||||||||||||  |||||||||    
T  12474097 tagtctagtggttagagctcacacaattaatgtggagaagtggggtgttcggagttcgaacttcagcccctgcataaattatacaatgttcctaccaact 12473998  T
Q  109 ga 110  Q
    ||    
T  12473997 ga 12473996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 97
Target Start/End: Original strand, 25460733 - 25460823
Alignment:
Q  9 tagtctagtggctagaactcaca---ttttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgt 97  Q
    ||||||||||| |||| ||||||   ||||||||||| |||||||||||||   | ||||||| |||| ||| |||||||||||||||||||    
T  25460733 tagtctagtggttagagctcacacatttttaaatgtggagaagtggggtgttcggggttcgaa-ccctgcccctgcataaattatacaatgt 25460823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 105
Target Start/End: Original strand, 33018480 - 33018576
Alignment:
Q  9 tagtctagtggctagaactcacattt-taaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctacca 105  Q
    ||||||||||||| || ||||||  | |||||||| ||||||||||||||   |||||||||||| |||| |||||||||||| |||| || ||||||    
T  33018480 tagtctagtggctggagctcacacatataaatgtggagaagtggggtgtccgaagttcgaaccccgaccc-tgcataaattatgcaatatccctacca 33018576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 111
Target Start/End: Complemental strand, 35241512 - 35241409
Alignment:
Q  9 tagtctagtggctagaactcacat--tttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaa 106  Q
    |||||||||||||| ||||||||   || || |||| |||||||| |||||| | ||||||||||| |||| |||||| | ||| |||| ||||||||||    
T  35241512 tagtctagtggctaaaactcacacaattaaattgtggagaagtggagtgtcagg-gttcgaaccccgacccctgcatataatatgcaatatctctaccaa 35241414  T
Q  107 ctgaa 111  Q
    |||||    
T  35241413 ctgaa 35241409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 84
Target Start/End: Complemental strand, 3741050 - 3740994
Alignment:
Q  28 cacattttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcata 84  Q
    ||||||||||||||| ||||||||||||||  | ||||||||||| |||| ||||||    
T  3741050 cacattttaaatgtggagaagtggggtgtccggggttcgaaccccgacccctgcata 3740994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 108
Target Start/End: Complemental strand, 7462901 - 7462845
Alignment:
Q  52 ggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaact 108  Q
    |||||| || ||||||||||| |||| |||||||||||||||||||| ||| |||||    
T  7462901 ggtgtccagggttcgaaccccgacccctgcataaattatacaatgtccctatcaact 7462845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 113
Target Start/End: Original strand, 28758397 - 28758477
Alignment:
Q  34 ttaaatgtgaagaagtggggtgtcaagag-ttcgaacccctacccttgcataaattatacaatgtctctaccaactgaatt 113  Q
    ||||||||| ||||||| ||||||  ||| || ||||||| || | |||||||||||| ||||||| ||||||||||||||    
T  28758397 ttaaatgtggagaagtgaggtgtccggaggtttgaaccccgactcctgcataaattatgcaatgtccctaccaactgaatt 28758477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 72
Target Start/End: Complemental strand, 38696806 - 38696742
Alignment:
Q  9 tagtctagtggctagaactcacat-tttaaatgtgaagaagtggggtgtcaagagttcgaacccc 72  Q
    ||||||||||| |||| ||||||  ||||||||||||||||||| ||||| || |||||||||||    
T  38696806 tagtctagtggatagagctcacacatttaaatgtgaagaagtggagtgtccagggttcgaacccc 38696742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 110
Target Start/End: Original strand, 40361572 - 40361635
Alignment:
Q  47 agtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    |||||||||||  ||||||||||||| ||||||||||| | ||| |||| || |||||||||||    
T  40361572 agtggggtgtccggagttcgaaccccaacccttgcatataatatgcaatatccctaccaactga 40361635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 110
Target Start/End: Complemental strand, 1469821 - 1469739
Alignment:
Q  28 cacattttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    |||| ||||| |||| |||||||||||||| ||||||| |||||| |||  | |||| | ||| |||| ||||||||||||||    
T  1469821 cacaatttaattgtggagaagtggggtgtctagagttcaaaccccaacctctacatataatatgcaatatctctaccaactga 1469739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 84
Target Start/End: Original strand, 38128989 - 38129071
Alignment:
Q  3 gttaaatagtctagtggctagaactca-cattttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcata 84  Q
    ||||||||| ||||||| ||||| ||| |||||| || ||||| |||||| ||||| || ||||||||||| |||| ||||||    
T  38128989 gttaaatagcctagtggttagaattcatcattttcaaggtgaataagtggagtgtccagggttcgaaccccgacccctgcata 38129071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 57
Target Start/End: Complemental strand, 5272206 - 5272177
Alignment:
Q  28 cacattttaaatgtgaagaagtggggtgtc 57  Q
    ||||||||||||||||||||||||||||||    
T  5272206 cacattttaaatgtgaagaagtggggtgtc 5272177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 34 - 111
Target Start/End: Complemental strand, 11313568 - 11313491
Alignment:
Q  34 ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactgaa 111  Q
    |||||| || |||||||||||||||||  |||||||| |  ||| | ||||| |||| ||||||| ||||||||||||    
T  11313568 ttaaatatgcagaagtggggtgtcaaggattcgaacctcagcccctacataatttatgcaatgtccctaccaactgaa 11313491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 84
Target Start/End: Original strand, 16720583 - 16720636
Alignment:
Q  31 attttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcata 84  Q
    |||||||||||||||||||||||||||  | ||| ||||||| |||| ||||||    
T  16720583 attttaaatgtgaagaagtggggtgtccggtgtttgaaccccgacccctgcata 16720636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 110
Target Start/End: Complemental strand, 37304024 - 37303944
Alignment:
Q  30 cattttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcata-aattatacaatgtctctaccaactga 110  Q
    ||||||||| ||||| |||||||||||| || ||||||||||| |||| |||||| ||| ||||| |||| || ||||||||    
T  37304024 cattttaaa-gtgaataagtggggtgtccagggttcgaaccccgacccctgcatataataatacattgtccctgccaactga 37303944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 110
Target Start/End: Complemental strand, 4068072 - 4067996
Alignment:
Q  34 ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    ||||||||| ||||||||||||||  | ||||||||| |  ||| |||||||| ||| || |||| |||||||||||    
T  4068072 ttaaatgtggagaagtggggtgtccggggttcgaacctcgccccctgcataaaatatgcattgtccctaccaactga 4067996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 8571907 - 8571827
Alignment:
Q  11 gtctagtggctagaactcacatt-ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattat 90  Q
    |||||||||||||| ||||||   ||||||||| |||||| ||||||   | ||||||||||| |||| ||||||||||||    
T  8571907 gtctagtggctagagctcacacaattaaatgtggagaagtagggtgttcggggttcgaaccccgacccctgcataaattat 8571827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 110
Target Start/End: Complemental strand, 11897365 - 11897262
Alignment:
Q  9 tagtctagtggctagaactcacat--tttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaa 106  Q
    |||||||||||||||| ||||||   ||||| |||| |||||||| |||||  | ||||||||||| || | |||||| | ||| |||| || |||||||    
T  11897365 tagtctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccgactcctgcatataatatgcaatatccctaccaa 11897266  T
Q  107 ctga 110  Q
    ||||    
T  11897265 ctga 11897262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 110
Target Start/End: Complemental strand, 20501445 - 20501409
Alignment:
Q  74 acccttgcataaattatacaatgtctctaccaactga 110  Q
    |||| |||||||||||| |||||||||||||||||||    
T  20501445 acccctgcataaattatgcaatgtctctaccaactga 20501409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 110
Target Start/End: Complemental strand, 36270831 - 36270755
Alignment:
Q  34 ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    ||||||||| ||||||||| |||   | ||||||||| | ||||||||||||| ||| |||||| |||| |||||||    
T  36270831 ttaaatgtggagaagtgggatgttcggggttcgaacctcgacccttgcataaaatatgcaatgtttctatcaactga 36270755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 98
Target Start/End: Original strand, 37684526 - 37684590
Alignment:
Q  34 ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtc 98  Q
    ||||||||| | ||||||||||||  ||||||||||| | |||  |||||||||||| |||||||    
T  37684526 ttaaatgtggataagtggggtgtctggagttcgaacctcgacctctgcataaattatgcaatgtc 37684590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 42525525 - 42525414
Alignment:
Q  1 tggttaaatagtctagtggctagaact--cacattttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtc 98  Q
    |||| ||||||||||||||||||| ||  |||| ||||| |||| |||||||| |||||  | |||||||||||  | | |||||| | ||| |||| ||    
T  42525525 tggtaaaatagtctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccggctcctgcatataatatgcaatatc 42525426  T
Q  99 tctaccaactga 110  Q
     |||||||||||    
T  42525425 cctaccaactga 42525414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 2e-20; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 28 - 110
Target Start/End: Complemental strand, 624576 - 624494
Alignment:
Q  28 cacattttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    ||||||||||||||| ||||||||||||||| | |||||||||||| ||| |||||||||||| |||||||  ||||||||||    
T  624576 cacattttaaatgtggagaagtggggtgtcaggggttcgaacccctgcccctgcataaattatgcaatgtccttaccaactga 624494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 13 - 110
Target Start/End: Original strand, 41137877 - 41137976
Alignment:
Q  13 ctagtggctagaactca--cattttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    |||||||||||| ||||  |||||||||| |||||||||||||||||    ||||||||||| |||| |||||| ||||| ||||||| |||||||||||    
T  41137877 ctagtggctagagctcaaacattttaaatatgaagaagtggggtgtctgtggttcgaaccccaacccctgcatatattatgcaatgtccctaccaactga 41137976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 34 - 106
Target Start/End: Complemental strand, 29406447 - 29406375
Alignment:
Q  34 ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaa 106  Q
    ||||||||| ||||||||| ||||  ||||||||||||| |||| |||||||||||| ||||||| |||||||    
T  29406447 ttaaatgtggagaagtgggttgtccggagttcgaaccccgacccctgcataaattatgcaatgtccctaccaa 29406375  T

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Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 110
Target Start/End: Original strand, 42134414 - 42134513
Alignment:
Q  13 ctagtggctagaactcacat--tttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    |||||||||||| |||||||  ||||| |||| ||||||||||||||  ||||||||||||| ||||||||||| | ||| |||| || |||| ||||||    
T  42134414 ctagtggctagagctcacataatttaattgtggagaagtggggtgtccggagttcgaaccccgacccttgcatataatatgcaatatccctactaactga 42134513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 34 - 110
Target Start/End: Original strand, 45139861 - 45139937
Alignment:
Q  34 ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    ||||||||| ||||||| ||||||  | |||||||||||  ||| |||||||||||||||||||| |||||||||||    
T  45139861 ttaaatgtggagaagtgaggtgtccggggttcgaaccccggcccctgcataaattatacaatgtccctaccaactga 45139937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 34 - 106
Target Start/End: Original strand, 46791188 - 46791260
Alignment:
Q  34 ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaa 106  Q
    ||||||||||||||||||||||||  |||||||||||||  | | ||||||||||||||||||| | ||||||    
T  46791188 ttaaatgtgaagaagtggggtgtccggagttcgaaccccatctcctgcataaattatacaatgtttttaccaa 46791260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 110
Target Start/End: Complemental strand, 51890915 - 51890811
Alignment:
Q  7 aatagtctagtggctagaactcacatt-ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctacca 105  Q
    ||||| |||||||||||| ||||||   ||||||||| ||||||||||||||  | |||||||||||  ||| |||||||||||| ||||||| || |||    
T  51890915 aatagcctagtggctagagctcacacaattaaatgtggagaagtggggtgtccggggttcgaaccccggcccctgcataaattatgcaatgtccctgcca 51890816  T
Q  106 actga 110  Q
    |||||    
T  51890815 actga 51890811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 110
Target Start/End: Complemental strand, 31852461 - 31852363
Alignment:
Q  13 ctagtggctagaactcacatt-ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    |||||||||||| ||||||   |||||| || ||||||||||||||  | ||||||||| |  |||||||||||||||||||||||| || ||||||||    
T  31852461 ctagtggctagagctcacacaattaaatatggagaagtggggtgtccggggttcgaacctcggcccttgcataaattatacaatgtccctgccaactga 31852363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 28 - 110
Target Start/End: Original strand, 33933713 - 33933795
Alignment:
Q  28 cacattttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    ||||| ||||||||| |||||||||||||| || | |||||||||  ||| |||||| ||||| ||||||| |||||||||||    
T  33933713 cacatattaaatgtggagaagtggggtgtccaggggtcgaaccccggcccctgcatatattatgcaatgtccctaccaactga 33933795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 110
Target Start/End: Original strand, 27091431 - 27091528
Alignment:
Q  13 ctagtggctagaactcacattttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    |||||||||||| ||||||   | ||| |||||||||||| ||||  | |||||||| || |||| |||| ||||||||||||||| |||||||||||    
T  27091431 ctagtggctagagctcacacaattaatatgaagaagtgggatgtccggggttcgaactccgacccctgcagaaattatacaatgtccctaccaactga 27091528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 110
Target Start/End: Original strand, 13264227 - 13264330
Alignment:
Q  9 tagtctagtggctagaactcacat--tttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaa 106  Q
    |||||||||||||||| ||||||   ||||| |||||||||||||||||||  | |||||||||||   ||||||||| | ||| |||| || |||||||    
T  13264227 tagtctagtggctagagctcacacaatttaattgtgaagaagtggggtgtccggggttcgaaccccggtccttgcatataatatgcaatatccctaccaa 13264326  T
Q  107 ctga 110  Q
    ||||    
T  13264327 ctga 13264330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 88
Target Start/End: Original strand, 38848074 - 38848154
Alignment:
Q  9 tagtctagtggctagaactcacat-tttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaatt 88  Q
    ||||||||||| |||| ||||||  |||||||||| ||||||||||||||  | ||||||||||| |||| ||||||||||    
T  38848074 tagtctagtggttagagctcacacatttaaatgtggagaagtggggtgtccggggttcgaaccccgacccctgcataaatt 38848154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 95
Target Start/End: Complemental strand, 40486553 - 40486470
Alignment:
Q  13 ctagtggctagaactcacat-tttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaat 95  Q
    |||||||||||| ||||||  ||||||||||||||||||| |||||  | |||||||||||  ||| |||||||||||| ||||    
T  40486553 ctagtggctagagctcacacatttaaatgtgaagaagtggagtgtccggggttcgaaccccggcccctgcataaattatgcaat 40486470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 111
Target Start/End: Original strand, 43627215 - 43627318
Alignment:
Q  9 tagtctagtggctagaactcacatt-ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaac 107  Q
    ||||||||| |||||| ||||||   |||||| || |||||||| ||||| || ||| ||||||| |||| |||||||||||| |||||||| || ||||    
T  43627215 tagtctagtagctagagctcacacaattaaatatggagaagtggagtgtccagggtttgaaccccgacccctgcataaattatgcaatgtctatatcaac 43627314  T
Q  108 tgaa 111  Q
    ||||    
T  43627315 tgaa 43627318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 11294796 - 11294882
Alignment:
Q  13 ctagtggctagaactcacat-tttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtc 98  Q
    |||||||||||| |||| |  |||||||||| ||||||||||||||  | |||||||||||  ||| |||||||||||| |||||||    
T  11294796 ctagtggctagagctcaaacatttaaatgtggagaagtggggtgtccggggttcgaaccccggcccctgcataaattatgcaatgtc 11294882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 32293220 - 32293134
Alignment:
Q  13 ctagtggctagaactcacatt-ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtc 98  Q
    |||||||||||| |||||||  ||||||||| ||||||||  |||| || |||| |||||| |||| |||||||||||| |||||||    
T  32293220 ctagtggctagagctcacataattaaatgtggagaagtggaatgtccagggttctaaccccgacccctgcataaattatgcaatgtc 32293134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 9 - 98
Target Start/End: Complemental strand, 42664097 - 42664007
Alignment:
Q  9 tagtctagtggctagaactcacatt-ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtc 98  Q
    |||||||||||||||| ||||||   ||||||||| |||||||||||||| ||  |||||||||| |||  ||| |||||||| |||||||    
T  42664097 tagtctagtggctagagctcacacaattaaatgtggagaagtggggtgtccaggattcgaaccccaacctctgcgtaaattatgcaatgtc 42664007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 31 - 108
Target Start/End: Original strand, 55260290 - 55260367
Alignment:
Q  31 attttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaact 108  Q
    |||||||||||| |||||||| ||||||   ||||||||| || ||| | |||||||||| ||||||| |||||||||    
T  55260290 attttaaatgtggagaagtggagtgtcagaggttcgaacctctgcccctacataaattatgcaatgtccctaccaact 55260367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 98
Target Start/End: Complemental strand, 2629669 - 2629605
Alignment:
Q  34 ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtc 98  Q
    ||||||||| |||||||||||||   | ||||||||||| |||| |||||||||||| |||||||    
T  2629669 ttaaatgtggagaagtggggtgttcggggttcgaaccccgacccctgcataaattatgcaatgtc 2629605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 110
Target Start/End: Complemental strand, 12625919 - 12625843
Alignment:
Q  34 ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    ||||||||| ||||||||||||||  | |||||||| || |||| |||||||||||| ||| |||  ||||||||||    
T  12625919 ttaaatgtggagaagtggggtgtccggtgttcgaactccgacccctgcataaattatgcaacgtccttaccaactga 12625843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 110
Target Start/End: Complemental strand, 39023288 - 39023189
Alignment:
Q  13 ctagtggctagaact--cacattttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    |||||||||||||||  |||| || || |||| |||||||| ||||| || ||||||||||| |||| |||||| | ||| |||| || |||||||||||    
T  39023288 ctagtggctagaacttacacaattaaattgtggagaagtggagtgtccagggttcgaaccccgacccctgcatataatatgcaatatccctaccaactga 39023189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 110
Target Start/End: Complemental strand, 40051735 - 40051636
Alignment:
Q  13 ctagtggctagaactcacat--tttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    |||||||||||| ||||||   ||||| |||| ||||||||||||||  | |||||||||||||||| | |||| | ||| |||| || |||||||||||    
T  40051735 ctagtggctagagctcacacaatttaattgtggagaagtggggtgtctggggttcgaacccctacccctacatataatatgcaatatccctaccaactga 40051636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 110
Target Start/End: Original strand, 42044026 - 42044102
Alignment:
Q  34 ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    ||||||||| ||||||||||||||  | |||| |||| |  ||| |||||||||||| |||||||||| ||||||||    
T  42044026 ttaaatgtggagaagtggggtgtccggggttcaaacctcggcccctgcataaattatgcaatgtctctgccaactga 42044102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 110
Target Start/End: Original strand, 50376657 - 50376705
Alignment:
Q  62 gttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    |||||||||||| ||| |||||| ||||| |||||||||||||||||||    
T  50376657 gttcgaaccccttcccctgcatatattatgcaatgtctctaccaactga 50376705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 111
Target Start/End: Complemental strand, 43539908 - 43539825
Alignment:
Q  28 cacattttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactgaa 111  Q
    ||||||||||||||| |||||||||||||| ||| |||||||| |  ||| | |||| |||||  | |||| ||||||||||||    
T  43539908 cacattttaaatgtggagaagtggggtgtctagaattcgaacctcagcccctacatatattatgtattgtccctaccaactgaa 43539825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 110
Target Start/End: Original strand, 13578439 - 13578521
Alignment:
Q  28 cacattttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    |||| ||||| |||| ||||||||||||||  | ||||||||||| |||| |||||| | ||| |||| || |||||||||||    
T  13578439 cacaatttaattgtggagaagtggggtgtccggggttcgaaccccgacccctgcatataatatgcaatatccctaccaactga 13578521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 72
Target Start/End: Original strand, 17447146 - 17447207
Alignment:
Q  13 ctagtggctagaactcacat--tttaaatgtgaagaagtggggtgtcaagagttcgaacccc 72  Q
    |||||||||||||||||||   ||||| ||||||||| ||| ||||| ||||||||||||||    
T  17447146 ctagtggctagaactcacacaatttaattgtgaagaaatggagtgtccagagttcgaacccc 17447207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 105
Target Start/End: Complemental strand, 25224561 - 25224491
Alignment:
Q  35 taaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctacca 105  Q
    ||||| |||||||||||||||||    |||||||| || |||| |||||||||||| ||||||| ||||||    
T  25224561 taaatatgaagaagtggggtgtccgaggttcgaactccgacccctgcataaattatgcaatgtccctacca 25224491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 84
Target Start/End: Complemental strand, 33359936 - 33359854
Alignment:
Q  3 gttaaatagtctagtggctagaactcacatttta-aatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcata 84  Q
    ||||| ||| ||||||||||||| |||| ||||  || ||||| |||||||||||| || ||||||||| | |||||||||||    
T  33359936 gttaagtagcctagtggctagaattcacctttttcaaggtgaataagtggggtgtccagggttcgaacctcgacccttgcata 33359854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 110
Target Start/End: Complemental strand, 47890791 - 47890709
Alignment:
Q  28 cacattttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    |||| ||||| |||| |||||||| |||||  | ||||||||||| |||| |||||| | ||| |||| ||||||||||||||    
T  47890791 cacaatttaattgtggagaagtggagtgtctggggttcgaaccccgacccctgcatataatatgcaatatctctaccaactga 47890709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 110
Target Start/End: Complemental strand, 49264638 - 49264540
Alignment:
Q  13 ctagtggctagaactcacatt-ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    |||||||||||| ||||||   ||||||||| ||||||||||||||  | ||||||||| |  ||| ||||||| |||| |||||||||| | ||||||    
T  49264638 ctagtggctagagctcacacaattaaatgtggagaagtggggtgtccggggttcgaacctcggcccctgcataagttatgcaatgtctctgctaactga 49264540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 72
Target Start/End: Complemental strand, 54215878 - 54215813
Alignment:
Q  9 tagtctagtggctagaactcacat--tttaaatgtgaagaagtggggtgtcaagagttcgaacccc 72  Q
    ||||||| |||||||| |||||||  |||||||||| ||||||||||||||  | |||||||||||    
T  54215878 tagtctaatggctagagctcacatattttaaatgtggagaagtggggtgtctggggttcgaacccc 54215813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 99
Target Start/End: Complemental strand, 11128779 - 11128742
Alignment:
Q  62 gttcgaacccctacccttgcataaattatacaatgtct 99  Q
    |||||||||||||||| ||||||||||||||| |||||    
T  11128779 gttcgaacccctacccctgcataaattatacattgtct 11128742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 107
Target Start/End: Original strand, 22530160 - 22530205
Alignment:
Q  62 gttcgaacccctacccttgcataaattatacaatgtctctaccaac 107  Q
    ||||||||||| | |  |||||||||||||||||||||||||||||    
T  22530160 gttcgaaccccgatctctgcataaattatacaatgtctctaccaac 22530205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 110
Target Start/End: Complemental strand, 32339419 - 32339338
Alignment:
Q  29 acattttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    ||||||||||||  |||||||||||||||  | ||| ||||||| ||||||||||| | ||| |||| || ||| |||||||    
T  32339419 acattttaaatgcaaagaagtggggtgtctggggtttgaaccccgacccttgcatataatatgcaatatccctaacaactga 32339338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 102
Target Start/End: Original strand, 44568166 - 44568267
Alignment:
Q  2 ggttaaatagtctagtggctagaactcacatt-ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctc 100  Q
    |||||| ||||||||||||| || ||||||   |||||| || ||||||| ||||||  ||||||||||||| |||| |||||| | ||| |||| ||||    
T  44568166 ggttaagtagtctagtggcttgagctcacacaattaaatatggagaagtgaggtgtctcgagttcgaaccccgacccctgcatataatatgcaatatctc 44568265  T
Q  101 ta 102  Q
    ||    
T  44568266 ta 44568267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 56
Target Start/End: Complemental strand, 5803572 - 5803544
Alignment:
Q  28 cacattttaaatgtgaagaagtggggtgt 56  Q
    |||||||||||||||||||||||||||||    
T  5803572 cacattttaaatgtgaagaagtggggtgt 5803544  T

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Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 110
Target Start/End: Complemental strand, 10402554 - 10402455
Alignment:
Q  13 ctagtggctagaactcacat--tttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    |||||||||||| ||||||   ||||| |||| ||||||| ||||||  | |||||||| || |||| |||||| | ||| |||| ||||||||||||||    
T  10402554 ctagtggctagagctcacacaatttaattgtggagaagtgaggtgtccggggttcgaactccgacccctgcatataatatgcaatatctctaccaactga 10402455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 86
Target Start/End: Complemental strand, 13161859 - 13161785
Alignment:
Q  13 ctagtggctagaactcaca--ttttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaa 86  Q
    |||||||||||| ||||||  |||||||||||| ||||||| |||||  | ||||||||||| |||| ||||||||    
T  13161859 ctagtggctagagctcacaaattttaaatgtga-gaagtggtgtgtctggggttcgaaccccgacccctgcataaa 13161785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 98
Target Start/End: Complemental strand, 19654936 - 19654872
Alignment:
Q  34 ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtc 98  Q
    ||||||||||||||||| |||||||| | ||| |||| |  ||| |||||||||||| |||||||    
T  19654936 ttaaatgtgaagaagtgaggtgtcaaaaattctaacctcagcccctgcataaattatgcaatgtc 19654872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 110
Target Start/End: Complemental strand, 21935594 - 21935491
Alignment:
Q  9 tagtctagtggctagaactcacat--tttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaa 106  Q
    |||||||||||||| | ||||||   ||||| |||| ||||||||||||||  | |||||||||||  ||| |||||| | ||| |||| || |||||||    
T  21935594 tagtctagtggctaaagctcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccggcccctgcatataatatgcaatatccctaccaa 21935495  T
Q  107 ctga 110  Q
    ||||    
T  21935494 ctga 21935491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 110
Target Start/End: Original strand, 26919425 - 26919524
Alignment:
Q  13 ctagtggctagaactcacat--tttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    |||||||||||| ||||||   ||||| ||||||||||||| |||||  |||||||||||||  | | |||||| | ||| |||| || |||||||||||    
T  26919425 ctagtggctagagctcacacaatttaattgtgaagaagtggagtgtccggagttcgaaccccagctcctgcatataatatgcaatatccctaccaactga 26919524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 31777918 - 31777858
Alignment:
Q  12 tctagtggctagaactcacattttaaatgtgaagaagtggggtgtcaagagttcgaacccc 72  Q
    ||||||||||||| ||||||  || |||||| ||||| ||||||||  |||||||||||||    
T  31777918 tctagtggctagagctcacacatttaatgtgtagaagcggggtgtctcgagttcgaacccc 31777858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 84
Target Start/End: Complemental strand, 32760758 - 32760682
Alignment:
Q  9 tagtctagtggctagaactcacatt-ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcata 84  Q
    ||||||||||||||||| |||||   |||| |||| |||| |||||||||  ||||||||||||| |||| ||||||    
T  32760758 tagtctagtggctagaattcacacaattaattgtggagaaatggggtgtccggagttcgaaccccaacccctgcata 32760682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 36099157 - 36099201
Alignment:
Q  28 cacattttaaatgtgaagaagtggggtgtcaagagttcgaacccc 72  Q
    ||||||||||||||| ||||||||||||||  | |||||||||||    
T  36099157 cacattttaaatgtggagaagtggggtgtccggggttcgaacccc 36099201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 110
Target Start/End: Complemental strand, 45849160 - 45849061
Alignment:
Q  13 ctagtggctagaactcacat--tttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    |||||||||||||||||||   || || |||| |||||||| ||||| || |||||||| ||  ||| |||||||| ||| |||| || |||||||||||    
T  45849160 ctagtggctagaactcacacaattaaattgtggagaagtggagtgtccagggttcgaactccagcccctgcataaaatatgcaatatccctaccaactga 45849061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 110
Target Start/End: Original strand, 50279048 - 50279096
Alignment:
Q  62 gttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    ||||| |||||  |||||||||||||||| ||||||| |||||||||||    
T  50279048 gttcggaccccagcccttgcataaattatgcaatgtccctaccaactga 50279096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 108
Target Start/End: Original strand, 55521437 - 55521517
Alignment:
Q  28 cacattttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaact 108  Q
    |||||||||||||||||||||||| ||||   | ||||||| ||| |||  |||||| | ||||||||||| |||| ||||    
T  55521437 cacattttaaatgtgaagaagtggagtgtttggggttcgaatcccgacctctgcatataatatacaatgtccctacaaact 55521517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 110
Target Start/End: Original strand, 56087907 - 56088010
Alignment:
Q  9 tagtctagtggctagaact--cacattttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaa 106  Q
    |||||||||||||||||||  |||| ||||| |||| ||||||||||||||  |  ||||||||||  ||| |||||| |  || |||| || |||||||    
T  56087907 tagtctagtggctagaactcacacaatttaattgtggagaagtggggtgtccgggattcgaaccccggcccctgcatataaaatgcaatatccctaccaa 56088006  T
Q  107 ctga 110  Q
    ||||    
T  56088007 ctga 56088010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 9e-20; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 34 - 111
Target Start/End: Original strand, 32788834 - 32788911
Alignment:
Q  34 ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactgaa 111  Q
    ||||||||| ||||||||||||||  ||||||||||||| |||| |||||||||||||||||| | ||||||||||||    
T  32788834 ttaaatgtgtagaagtggggtgtccggagttcgaaccccaacccctgcataaattatacaatgaccctaccaactgaa 32788911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 3294887 - 3294778
Alignment:
Q  3 gttaaatagtctagtggctagaactcacat--tttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctc 100  Q
    ||||||||| |||||||||||||||||||   ||||| |||||||||||||||||||  | ||||||||||| |||| |||||| | ||| |||| || |    
T  3294887 gttaaatagcctagtggctagaactcacacaatttaattgtgaagaagtggggtgtccggggttcgaaccccgacccctgcatataatatgcaatatccc 3294788  T
Q  101 taccaactga 110  Q
    ||||||||||    
T  3294787 taccaactga 3294778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 34 - 110
Target Start/End: Original strand, 23610299 - 23610375
Alignment:
Q  34 ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    |||| ||||||||||||||||||| || ||| ||||||| |||| |||||||||||| ||||||| |||||||||||    
T  23610299 ttaattgtgaagaagtggggtgtccagcgtttgaaccccgacccctgcataaattatgcaatgtccctaccaactga 23610375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 106
Target Start/End: Complemental strand, 32283654 - 32283556
Alignment:
Q  9 tagtctagtggctagaactcacatt-ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaa 106  Q
    ||||||||||| || |||||||||  ||||||||| | |||||  |||||  | ||||||||||| ||||||||||||||||| ||||||| |||||||    
T  32283654 tagtctagtggttataactcacataattaaatgtggaaaagtgaagtgtctggggttcgaaccccgacccttgcataaattatgcaatgtccctaccaa 32283556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 110
Target Start/End: Original strand, 2488845 - 2488942
Alignment:
Q  13 ctagtggctagaactcacattttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    |||||||||||| ||||||   | ||| |||||||||||| ||||  | |||||||| || |||| |||| ||||||||||||||| |||||||||||    
T  2488845 ctagtggctagagctcacacaattaatatgaagaagtgggatgtccggggttcgaactccgacccctgcagaaattatacaatgtccctaccaactga 2488942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 14 - 110
Target Start/End: Original strand, 978094 - 978190
Alignment:
Q  14 tagtggctagaactcacattttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    |||||| ||||||||||| ||||| |||| ||||||||||||||  | ||||||||||| |||| |||||| | ||| |||| || |||| ||||||    
T  978094 tagtggttagaactcacaatttaattgtggagaagtggggtgtccggtgttcgaaccccgacccctgcatataatatgcaatatccctactaactga 978190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 104
Target Start/End: Complemental strand, 17534959 - 17534867
Alignment:
Q  13 ctagtggctagaactcacatt-ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctacc 104  Q
    |||||||||||||||||||   ||||||||| ||||||  ||||||  |||||||||||||  ||| |||||||||||| ||||||| |||||    
T  17534959 ctagtggctagaactcacacaattaaatgtggagaagtcaggtgtccggagttcgaaccccggcccctgcataaattatgcaatgtccctacc 17534867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 26 - 84
Target Start/End: Complemental strand, 3709957 - 3709899
Alignment:
Q  26 ctcacattttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcata 84  Q
    ||||||||||||||||| ||||||||||||||  | |||||||||||  ||||||||||    
T  3709957 ctcacattttaaatgtggagaagtggggtgtctggggttcgaaccccaccccttgcata 3709899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 9 - 84
Target Start/End: Complemental strand, 18904382 - 18904305
Alignment:
Q  9 tagtctagtggctagaactcaca--ttttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcata 84  Q
    ||||||||||||| || ||||||  ||||||||||| ||||||||||||||  | ||||||||||| |||| ||||||    
T  18904382 tagtctagtggctggagctcacacattttaaatgtggagaagtggggtgtccggggttcgaaccccgacccctgcata 18904305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 34 - 111
Target Start/End: Complemental strand, 24319103 - 24319026
Alignment:
Q  34 ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactgaa 111  Q
    |||| |||| |||||||| |||||  | |||||||||||  ||| |||||||||||| ||||||| ||||||||||||    
T  24319103 ttaattgtggagaagtggagtgtccggggttcgaaccccggcccctgcataaattatgcaatgtccctaccaactgaa 24319026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 110
Target Start/End: Original strand, 15963900 - 15963999
Alignment:
Q  13 ctagtggctagaactcacat--tttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    |||||||||||||||||||   || || |||| |||||||| ||||| || |||||||||||  ||| |||||||| ||| |||| || |||||||||||    
T  15963900 ctagtggctagaactcacacaattaaattgtggagaagtggagtgtccagggttcgaaccccagcccctgcataaaatatgcaatatccctaccaactga 15963999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 98
Target Start/End: Complemental strand, 31952359 - 31952295
Alignment:
Q  34 ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtc 98  Q
    |||| |||| ||||||||||||||  | ||||||||||| |||| ||||||||||||| ||||||    
T  31952359 ttaattgtggagaagtggggtgtccggggttcgaaccccaacccctgcataaattatataatgtc 31952295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 95
Target Start/End: Original strand, 32670028 - 32670095
Alignment:
Q  28 cacattttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaat 95  Q
    |||||| ||||| || |||||| |||||||| | |||||||||||| ||| |||||||||||| ||||    
T  32670028 cacattataaatatggagaagtagggtgtcaggggttcgaacccctgcccctgcataaattatgcaat 32670095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 110
Target Start/End: Complemental strand, 2251930 - 2251852
Alignment:
Q  32 ttttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    ||||||||||| ||||||||||||||  | |||||||||||  ||| |||||| | ||| |||| || |||||||||||    
T  2251930 ttttaaatgtggagaagtggggtgtccggggttcgaaccccggcccctgcatatagtatgcaatatccctaccaactga 2251852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 42
Target Start/End: Original strand, 6338653 - 6338682
Alignment:
Q  13 ctagtggctagaactcacattttaaatgtg 42  Q
    ||||||||||||||||||||||||||||||    
T  6338653 ctagtggctagaactcacattttaaatgtg 6338682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 105
Target Start/End: Complemental strand, 20846142 - 20846065
Alignment:
Q  28 cacattttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctacca 105  Q
    ||||||||||||||  ||||||| |||||  || ||||||||||| |||  |||||| ||||| || |||||||||||    
T  20846142 cacattttaaatgtagagaagtgtggtgtatagggttcgaaccccaaccactgcatatattatgcattgtctctacca 20846065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 30064375 - 30064330
Alignment:
Q  12 tctagtggctagaactcacattttaaatgtgaagaagtggggtgtc 57  Q
    ||||||||||  |||||||||||||||||||||||| || ||||||    
T  30064375 tctagtggctgaaactcacattttaaatgtgaagaaatgaggtgtc 30064330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 34 - 107
Target Start/End: Complemental strand, 34268372 - 34268299
Alignment:
Q  34 ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaac 107  Q
    |||| ||||||||||| ||||||   | ||||||||||  |||| |||||||||||| ||||||| ||||||||    
T  34268372 ttaattgtgaagaagtagggtgttcggggttcgaaccctgacccctgcataaattatgcaatgtccctaccaac 34268299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 361288 - 361217
Alignment:
Q  1 tggttaaatagtctagtggctagaactcacat--tttaaatgtgaagaagtggggtgtcaagagttcgaacc 70  Q
    ||||||| |||  ||||||||||| |||||||  ||||||| || ||||||||||||||  |||||||||||    
T  361288 tggttaagtagcatagtggctagagctcacatattttaaatatggagaagtggggtgtctggagttcgaacc 361217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 110
Target Start/End: Complemental strand, 7177408 - 7177309
Alignment:
Q  13 ctagtggctagaactcacatt--ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    |||||||||||| |||||| |  |||| |||| ||||||||||||||  | |||||||||||  ||| |||||| |  ||||||| || |||||||||||    
T  7177408 ctagtggctagagctcacactgtttaattgtggagaagtggggtgtctggggttcgaaccccagcccctgcatataaaatacaatatccctaccaactga 7177309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 110
Target Start/End: Original strand, 9372158 - 9372257
Alignment:
Q  13 ctagtggctagaactcacat--tttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    ||||| |||||||||||||   || || |||| |||||||| ||||| || ||||||||||| |||| |||||| | ||| |||| || |||||||||||    
T  9372158 ctagtagctagaactcacacaattaaattgtggagaagtggagtgtccagggttcgaaccccgacccctgcatataatatgcaatatccctaccaactga 9372257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 110
Target Start/End: Complemental strand, 12284238 - 12284135
Alignment:
Q  9 tagtctagtggctagaactcacat--tttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaa 106  Q
    |||||||||||||||| ||||||   ||||| |||| |||||||| || ||  ||||||||||||| || | |||||| | ||| |||| || |||||||    
T  12284238 tagtctagtggctagagctcacacaatttaattgtggagaagtggagtttccggagttcgaaccccgacacctgcatataatattcaatatccctaccaa 12284139  T
Q  107 ctga 110  Q
    ||||    
T  12284138 ctga 12284135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 111
Target Start/End: Complemental strand, 13436637 - 13436557
Alignment:
Q  31 attttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactgaa 111  Q
    ||||||||| || ||||||||||||||| | ||| |||||  | ||| |||||| ||||| ||||||| |||| |||||||    
T  13436637 attttaaatatggagaagtggggtgtcaggggtttgaaccattgcccctgcatatattatgcaatgtccctactaactgaa 13436557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 20729076 - 20728965
Alignment:
Q  1 tggttaaatagtctagtggctagaact--cacattttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtc 98  Q
    ||||||| ||| |||||||||||| ||  |||| || || ||||| ||||||| ||||| ||| ||||||||||  ||||| |||| | ||| |||| ||    
T  20729076 tggttaagtagcctagtggctagagctcacacaattaaattgtgaggaagtggagtgtccagaattcgaaccccggcccttacatataatatgcaatatc 20728977  T
Q  99 tctaccaactga 110  Q
    ||||| ||||||    
T  20728976 tctactaactga 20728965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 110
Target Start/End: Complemental strand, 22997453 - 22997350
Alignment:
Q  9 tagtctagtggctagaactcacat--tttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaa 106  Q
    |||||||||||||||| ||||||   ||||| |||| |||||| |||||||  | ||||||||||| |||| | |||| | ||| |||| || |||||||    
T  22997453 tagtctagtggctagagctcacacaatttaattgtggagaagtagggtgtccggggttcgaaccccgacccctacatataatattcaatatccctaccaa 22997354  T
Q  107 ctga 110  Q
    ||||    
T  22997353 ctga 22997350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 110
Target Start/End: Original strand, 23790948 - 23791051
Alignment:
Q  9 tagtctagtggctagaactcacat--tttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaa 106  Q
    |||||||||||||||| ||||||   ||||| |||| |||||| |||||||  | ||||||||||| |||| | |||| | ||| |||| || |||||||    
T  23790948 tagtctagtggctagagctcacacaatttaattgtggagaagtagggtgtccggggttcgaaccccgacccctacatataatattcaatatccctaccaa 23791047  T
Q  107 ctga 110  Q
    ||||    
T  23791048 ctga 23791051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 98
Target Start/End: Original strand, 32620051 - 32620115
Alignment:
Q  34 ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtc 98  Q
    ||||||||| |||| ||||||||| ||  |||||||||| || | |||||||||||| |||||||    
T  32620051 ttaaatgtggagaaatggggtgtccaggattcgaaccccaactcctgcataaattatgcaatgtc 32620115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 48; Significance: 1e-18; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 28 - 111
Target Start/End: Complemental strand, 8741569 - 8741486
Alignment:
Q  28 cacattttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactgaa 111  Q
    |||||| |||||||| ||||||||||||||| | |||||||||||| ||| ||||||||||||  |||||| ||||||||||||    
T  8741569 cacattataaatgtggagaagtggggtgtcaggggttcgaacccctgcccctgcataaattatgtaatgtccctaccaactgaa 8741486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 28 - 110
Target Start/End: Original strand, 619375 - 619458
Alignment:
Q  28 cacattttaaatgtgaagaagtggggtgtcaagagttcgaacccctaccct-tgcataaattatacaatgtctctaccaactga 110  Q
    ||||||||||||||||||||||| | |||| | | |||||||||||| ||| |||||| |||||||| ||||||||||||||||    
T  619375 cacattttaaatgtgaagaagtgagatgtctataattcgaacccctatcctatgcatatattatacattgtctctaccaactga 619458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 110
Target Start/End: Original strand, 23991222 - 23991320
Alignment:
Q  13 ctagtggctagaactcacatt-ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    |||||||||||| ||||||   ||||||||| |||||||||||||| || |||||||||||  ||| |||||||||||| ||||||| || ||||||||    
T  23991222 ctagtggctagagctcacacaattaaatgtggagaagtggggtgtccagggttcgaaccccggcccctgcataaattatgcaatgtccctgccaactga 23991320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 33 - 106
Target Start/End: Complemental strand, 51137875 - 51137802
Alignment:
Q  33 tttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaa 106  Q
    |||||||||| ||||||||| |||| ||||||||||| ||  ||| |||||||||||||||||||| |||||||    
T  51137875 tttaaatgtggagaagtgggatgtccagagttcgaactccggcccctgcataaattatacaatgtccctaccaa 51137802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 31 - 110
Target Start/End: Original strand, 2997634 - 2997713
Alignment:
Q  31 attttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    ||||||||| || ||| ||||||||||| | |||||||||||| ||| |||||||||||| ||||||| |||| ||||||    
T  2997634 attttaaatatggagatgtggggtgtcaggggttcgaacccctgcccctgcataaattatgcaatgtccctactaactga 2997713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 28 - 110
Target Start/End: Complemental strand, 44579979 - 44579896
Alignment:
Q  28 cacattttaaatgtgaagaagtggggtgtcaagagttcgaacccc-tacccttgcataaattatacaatgtctctaccaactga 110  Q
    |||||| |||||||| ||||||||||||||| | ||||||||||| |  |  |||||||||||||||||||||||| |||||||    
T  44579979 cacattataaatgtggagaagtggggtgtcaggggttcgaaccccctgacactgcataaattatacaatgtctctatcaactga 44579896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 110
Target Start/End: Complemental strand, 11333780 - 11333678
Alignment:
Q  9 tagtctagtggctagaactcacatt-ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaac 107  Q
    |||||||||| ||||| ||||||   ||||||||| ||||||||||||||  | |||||||| ||  ||| |||||||||||| ||||||| ||||||||    
T  11333780 tagtctagtgactagagctcacacaattaaatgtggagaagtggggtgtccggggttcgaactccggcccctgcataaattatgcaatgtccctaccaac 11333681  T
Q  108 tga 110  Q
    |||    
T  11333680 tga 11333678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 110
Target Start/End: Complemental strand, 11491801 - 11491699
Alignment:
Q  9 tagtctagtggctagaactcacatt-ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaac 107  Q
    |||||||||| ||||| ||||||   ||||||||| ||||||||||||||  | |||||||| ||  ||| |||||||||||| ||||||| ||||||||    
T  11491801 tagtctagtgactagagctcacacaattaaatgtggagaagtggggtgtccggggttcgaactccggcccctgcataaattatgcaatgtccctaccaac 11491702  T
Q  108 tga 110  Q
    |||    
T  11491701 tga 11491699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 31124590 - 31124682
Alignment:
Q  7 aatagtctagtggctagaactcacatt-ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtc 98  Q
    ||||| |||||||||||| ||||||   ||||||||| ||||||||||| ||  |||||||||||||  ||| |||||||||||| |||||||    
T  31124590 aatagcctagtggctagagctcacacaattaaatgtggagaagtggggtatccggagttcgaaccccggcccctgcataaattatgcaatgtc 31124682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 34 - 110
Target Start/End: Original strand, 36666556 - 36666632
Alignment:
Q  34 ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    |||| |||| ||||||||||||||  | |||||||||||  ||| |||||||||||| ||||||| |||||||||||    
T  36666556 ttaattgtggagaagtggggtgtccggggttcgaaccccggcccctgcataaattatgcaatgtccctaccaactga 36666632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 88
Target Start/End: Original strand, 34557275 - 34557357
Alignment:
Q  7 aatagtctagtggctagaactcaca-ttttaaatgtgaagaagtggggtgt-caagagttcgaacccctacccttgcataaatt 88  Q
    |||||||||||||||||| ||||||  |||||||||| |||||| |||||| ||||| |||||||||| |||| ||||||||||    
T  34557275 aatagtctagtggctagagctcacacatttaaatgtggagaagtagggtgtccaaga-ttcgaaccccgacccctgcataaatt 34557357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 108
Target Start/End: Original strand, 43021573 - 43021676
Alignment:
Q  6 aaatagtctagtggctagaactcacatt-ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctacc 104  Q
    ||||||||||||||||| | ||||||   ||||||||| ||||||||||||||    ||||||||||| |||| |||||||| ||| || |||| |||||    
T  43021573 aaatagtctagtggctacagctcacacgattaaatgtggagaagtggggtgtccgaggttcgaaccccgacccctgcataaaatatgcattgtccctacc 43021672  T
Q  105 aact 108  Q
    ||||    
T  43021673 aact 43021676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 106
Target Start/End: Complemental strand, 44546106 - 44546039
Alignment:
Q  39 tgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaa 106  Q
    |||| |||||||||||||| ||||||||||||   | || |||||||||||||||||||| |||||||    
T  44546106 tgtggagaagtggggtgtccagagttcgaaccgtgatccctgcataaattatacaatgtccctaccaa 44546039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 52426867 - 52426929
Alignment:
Q  9 tagtctagtggctagaactcacat-tttaaatgtgaagaagtggggtgtcaagagttcgaacc 70  Q
    ||||||||||||||||||||||||  ||||||||| |||| |||||||||  |||||||||||    
T  52426867 tagtctagtggctagaactcacatcattaaatgtggagaaatggggtgtctggagttcgaacc 52426929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 26909849 - 26909914
Alignment:
Q  33 tttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtc 98  Q
    |||||||||| |||||||||||||| || |||||||||||  ||  |||||||||||| |||||||    
T  26909849 tttaaatgtggagaagtggggtgtccagggttcgaacccccgcctctgcataaattatgcaatgtc 26909914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 100
Target Start/End: Complemental strand, 10632786 - 10632718
Alignment:
Q  33 tttaaatgtgaagaagtgggg-tgtcaagagttcgaacccctacccttgcataaattatacaatgtctc 100  Q
    |||||||||| |||||||||| ||||  | ||||||||||| |||| |||||||||||| |||||||||    
T  10632786 tttaaatgtggagaagtgggggtgtccggggttcgaaccccgacccctgcataaattatgcaatgtctc 10632718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 110
Target Start/End: Complemental strand, 11860132 - 11860056
Alignment:
Q  34 ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    ||||||||| ||||||||||||||  | ||||||||||| |||| |  ||||||||| |||||| ||| ||||||||    
T  11860132 ttaaatgtggagaagtggggtgtccggggttcgaaccccgacccctatataaattatgcaatgtttctgccaactga 11860056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 110
Target Start/End: Complemental strand, 24875061 - 24874985
Alignment:
Q  34 ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    |||||| || ||||||||||||||    |||||||||||| ||| |||||||||||| |||| || |||||||||||    
T  24875061 ttaaatatggagaagtggggtgtccgaggttcgaacccctgcccatgcataaattatgcaatatccctaccaactga 24874985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 110
Target Start/End: Original strand, 33843175 - 33843251
Alignment:
Q  34 ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    ||||| |||||||||||||||||   | ||||||||||| |||  |||||||||||| |||| |||||| |||||||    
T  33843175 ttaaacgtgaagaagtggggtgttcggggttcgaaccccgacctctgcataaattatgcaatatctctatcaactga 33843251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 110
Target Start/End: Complemental strand, 33950804 - 33950728
Alignment:
Q  34 ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    ||||| |||||||||||||||||   | ||||||||||| |||  |||||||||||| |||| |||||| |||||||    
T  33950804 ttaaacgtgaagaagtggggtgttcggggttcgaaccccgacctctgcataaattatgcaatatctctatcaactga 33950728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 110
Target Start/End: Complemental strand, 43884911 - 43884808
Alignment:
Q  9 tagtctagtggctagaactcacat--tttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaa 106  Q
    |||||||||||||||||||||||   ||||| |||| |||||||| ||||| || |||||||||||  | | |||||| | ||| |||| || |||||||    
T  43884911 tagtctagtggctagaactcacacaatttaattgtggagaagtggagtgtccagggttcgaaccccggctcctgcatataatatgcaatatccctaccaa 43884812  T
Q  107 ctga 110  Q
    ||||    
T  43884811 ctga 43884808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 110
Target Start/End: Complemental strand, 44732750 - 44732647
Alignment:
Q  9 tagtctagtggctagaactcacat--tttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaa 106  Q
    ||||||||||||||||  |||||   ||||| |||| ||||||||||||||  | |||||||||||  |||||||||| | ||| |||| || |||||||    
T  44732750 tagtctagtggctagagttcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccggcccttgcatataatatgcaatatccctaccaa 44732651  T
Q  107 ctga 110  Q
    ||||    
T  44732650 ctga 44732647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 110
Target Start/End: Original strand, 47469053 - 47469129
Alignment:
Q  34 ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    ||||||||| ||||||||||||||  | ||||||||| |  ||| |||||||||||| ||||||| || ||||||||    
T  47469053 ttaaatgtggagaagtggggtgtccggggttcgaacctcagcccctgcataaattatgcaatgtccctgccaactga 47469129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 98
Target Start/End: Complemental strand, 14320983 - 14320916
Alignment:
Q  31 attttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtc 98  Q
    |||||||||||  ||||||||||||||  ||||||||||||| ||| || |||| |||||| ||||||    
T  14320983 attttaaatgtacagaagtggggtgtccggagttcgaaccccgacctttacatatattatataatgtc 14320916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 113
Target Start/End: Complemental strand, 33033243 - 33033137
Alignment:
Q  9 tagtctagtggctagaactcaca--ttttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaa 106  Q
    ||||||||||| |||| ||||||  |||||| |||| |||| ||||||||| || |||||||||||   || |||||| | ||| |||| || |||||||    
T  33033243 tagtctagtggttagagctcacacattttaattgtggagaaatggggtgtctagggttcgaaccccggtccctgcatataatatgcaatatccctaccaa 33033144  T
Q  107 ctgaatt 113  Q
    |||||||    
T  33033143 ctgaatt 33033137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 111
Target Start/End: Complemental strand, 44245445 - 44245367
Alignment:
Q  32 ttttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactgaa 111  Q
    ||||||||||| |||||||||||||| || |||||| ||||| ||| ||||||||| ||  | |||||||||||| ||||    
T  44245445 ttttaaatgtggagaagtggggtgtc-agggttcgagcccctgcccctgcataaatcatgtattgtctctaccaattgaa 44245367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 84
Target Start/End: Complemental strand, 44440687 - 44440616
Alignment:
Q  14 tagtggctagaactcacatttta-aatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcata 84  Q
    |||||||||||||| |||  ||| |||||  ||||||||||||||  |||||||||||||| ||||||||||    
T  44440687 tagtggctagaacttacacattataatgtagagaagtggggtgtccggagttcgaacccctgcccttgcata 44440616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 113
Target Start/End: Original strand, 45416158 - 45416237
Alignment:
Q  34 ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactgaatt 113  Q
    ||||||||| ||||||||||||||  |  ||||||||||  ||| |||||||||||| ||||||  || |||||||||||    
T  45416158 ttaaatgtggagaagtggggtgtccgggattcgaaccccggcccctgcataaattatgcaatgttcctgccaactgaatt 45416237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 110
Target Start/End: Complemental strand, 50533187 - 50533082
Alignment:
Q  6 aaatagtctagtggctagaactcaca--ttttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctac 103  Q
    ||||||| |||||| | |||||||||  ||||||||||| | |||||||| ||| || || ||||| || |||| |||||| ||||| |||||| |||||    
T  50533187 aaatagtttagtgggtggaactcacacattttaaatgtggataagtggggcgtccagggt-cgaactccgacccctgcatatattatgcaatgtttctac 50533089  T
Q  104 caactga 110  Q
    |||||||    
T  50533088 caactga 50533082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 106
Target Start/End: Original strand, 12374488 - 12374565
Alignment:
Q  28 cacattttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaa 106  Q
    |||| ||||| |||||||||||||||||||  | ||||||||||| ||||||||||| | ||| |||| ||||| ||||    
T  12374488 cacaatttaattgtgaagaagtggggtgtc-cgggttcgaaccccgacccttgcatataatatgcaatatctctgccaa 12374565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 72
Target Start/End: Original strand, 18512528 - 18512593
Alignment:
Q  9 tagtctagtggctagaactcaca--ttttaaatgtgaagaagtggggtgtcaagagttcgaacccc 72  Q
    ||||||||||||| || ||||||  ||||||||||| ||||||||||||||  | |||||||||||    
T  18512528 tagtctagtggctggagctcacacattttaaatgtggagaagtggggtgtccggggttcgaacccc 18512593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 108
Target Start/End: Original strand, 18607789 - 18607863
Alignment:
Q  34 ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaact 108  Q
    ||||||||  |||||||||||||   | |||||||||||  ||| |||||||||||| ||||||| |||||||||    
T  18607789 ttaaatgtagagaagtggggtgttcggggttcgaaccccagcccctgcataaattatgcaatgtccctaccaact 18607863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 110
Target Start/End: Original strand, 23933058 - 23933124
Alignment:
Q  44 agaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    |||||||||||||    |||||||||||| |||| |  ||||||||||||||||| |||||||||||    
T  23933058 agaagtggggtgttcgaagttcgaaccccgacccctagataaattatacaatgtccctaccaactga 23933124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 110
Target Start/End: Original strand, 35605597 - 35605679
Alignment:
Q  28 cacattttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    |||| ||||| |||| |||||||||||||  || ||||||||||| |||| |||||| | ||| |||| || |||||||||||    
T  35605597 cacaatttaattgtggagaagtggggtgtttagggttcgaaccccgacccctgcatataatatgcaatatccctaccaactga 35605679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 90
Target Start/End: Complemental strand, 41998444 - 41998382
Alignment:
Q  28 cacattttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattat 90  Q
    ||||||||||||||| |||||| ||||||| || ||||||||||| ||| ||| ||| |||||    
T  41998444 cacattttaaatgtggagaagtagggtgtctagggttcgaaccccgaccgttgtatatattat 41998382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 110
Target Start/End: Original strand, 42490384 - 42490466
Alignment:
Q  28 cacattttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    |||| ||||| |||| ||||||||||||||  | ||||||||||| |||| |||||| | ||| |||| || |||||||||||    
T  42490384 cacaatttaattgtggagaagtggggtgtccggggttcgaaccccgacccctgcatataatatgcaatatccctaccaactga 42490466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 90
Target Start/End: Original strand, 45180496 - 45180557
Alignment:
Q  28 cacattttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattat 90  Q
    |||||| |||||||  ||||||||| ||||| | |||||||||||||||| ||||||||||||    
T  45180496 cacattataaatgtagagaagtgggttgtcagg-gttcgaacccctacccctgcataaattat 45180557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 1604198 - 1604247
Alignment:
Q  28 cacattttaaatgtgaagaagtggggtgtcaagagttcgaacccctaccc 77  Q
    ||||||||||||||| |||| || ||||||||| ||||||||||| ||||    
T  1604198 cacattttaaatgtggagaattgtggtgtcaagggttcgaaccccgaccc 1604247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 5431013 - 5431062
Alignment:
Q  28 cacattttaaatgtgaagaagtggggtgtcaagagttcgaacccctaccc 77  Q
    ||||||||||||||| | |||||||||||| | |||||||||||| ||||    
T  5431013 cacattttaaatgtggataagtggggtgtccaaagttcgaaccccgaccc 5431062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 34 - 87
Target Start/End: Original strand, 39670809 - 39670862
Alignment:
Q  34 ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaat 87  Q
    ||||||||| ||||||||| ||||  ||||||||||||| |||| |||||||||    
T  39670809 ttaaatgtggagaagtgggatgtctggagttcgaaccccaacccctgcataaat 39670862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 110
Target Start/End: Original strand, 4865802 - 4865878
Alignment:
Q  34 ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    |||||||||||||||||| ||||   | |||||||| || |||| | |||| ||||| ||||||| |||||||||||    
T  4865802 ttaaatgtgaagaagtggagtgttcggggttcgaactccgacccctacatatattatgcaatgtccctaccaactga 4865878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 54
Target Start/End: Complemental strand, 6213538 - 6213491
Alignment:
Q  9 tagtctagtggctagaact--cacattttaaatgtgaagaagtggggt 54  Q
    |||||||||||||||||||  |||| ||||| ||||||||||||||||    
T  6213538 tagtctagtggctagaactcacacaatttaattgtgaagaagtggggt 6213491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 110
Target Start/End: Complemental strand, 21265769 - 21265670
Alignment:
Q  13 ctagtggctagaactcacat--tttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    |||||||||||| ||||||   ||||| |||| ||||||||||||||  | |||||||||||  ||| |||||| | ||| |||| || |||||||||||    
T  21265769 ctagtggctagagctcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccggcccctgcatataatatgcaatatccctaccaactga 21265670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 84
Target Start/End: Original strand, 23973464 - 23973540
Alignment:
Q  9 tagtctagtggctagaactcaca-ttttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcata 84  Q
    ||||||||||||||||| ||||| |||| || ||||| |||||||||||   | ||||||| ||| |||||||||||    
T  23973464 tagtctagtggctagaattcacatttttcaacgtgaataagtggggtgtacggggttcgaatcccaacccttgcata 23973540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 98
Target Start/End: Complemental strand, 33507958 - 33507894
Alignment:
Q  34 ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtc 98  Q
    |||||| | ||||||||||||||  || |||||||| |  |||| ||||||||||||||||||||    
T  33507958 ttaaatataaagaagtggggtgttcagggttcgaactctgacccctgcataaattatacaatgtc 33507894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 47402631 - 47402671
Alignment:
Q  9 tagtctagtggctagaactcacattttaaatgtgaagaagt 49  Q
    |||||||||||||| |||||||||||||||| || ||||||    
T  47402631 tagtctagtggctaaaactcacattttaaatatggagaagt 47402671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 34 - 108
Target Start/End: Complemental strand, 3596340 - 3596266
Alignment:
Q  34 ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaact 108  Q
    ||||||||| ||||||||||||||  | ||||||||||| |||| |||||||||||| |||||||||| ||||||    
T  3596340 ttaaatgtggagaagtggggtgtccggggttcgaaccccgacccctgcataaattatgcaatgtctctgccaact 3596266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 110
Target Start/End: Complemental strand, 20919722 - 20919624
Alignment:
Q  13 ctagtggctagaactcacatt-ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    |||||||||||| |||||||  ||||||||| ||||||||||||||  | |||||||||||  |||  ||||||||||| ||||||| |||||||||||    
T  20919722 ctagtggctagagctcacataattaaatgtggagaagtggggtgtccggggttcgaaccccggccccagcataaattatgcaatgtccctaccaactga 20919624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 27 - 110
Target Start/End: Complemental strand, 23405293 - 23405210
Alignment:
Q  27 tcacattttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    |||| |||| || ||||| |||||||||||| || ||||||||||| |||| |||||| ||||| ||||||| |||||||||||    
T  23405293 tcacctttttaaggtgaataagtggggtgtccagggttcgaaccccgacccctgcatatattatgcaatgtccctaccaactga 23405210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 111
Target Start/End: Original strand, 2145692 - 2145792
Alignment:
Q  13 ctagtggctagaactcaca--ttttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    ||||||||| || ||||||  || |||||||| ||||||||||||||| |  ||| |||| || ||| |||||||||||| ||||||| |||||||||||    
T  2145692 ctagtggctggagctcacacgttataaatgtggagaagtggggtgtcagggattcaaacctctgcccctgcataaattatgcaatgtccctaccaactga 2145791  T
Q  111 a 111  Q
    |    
T  2145792 a 2145792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 18254685 - 18254641
Alignment:
Q  28 cacattttaaatgtgaagaagtggggtgtcaagagttcgaacccc 72  Q
    ||||||||||||||||||||||||||||||  |||||||||||||    
T  18254685 cacattttaaatgtgaagaagtggggtgtctggagttcgaacccc 18254641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 34 - 110
Target Start/End: Complemental strand, 44558092 - 44558017
Alignment:
Q  34 ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    ||||||||| ||||||||||||||  | |||||||||||  ||| |||||||||||| ||||||| |||||||||||    
T  44558092 ttaaatgtggagaagtggggtgtccggggttcgaaccccagcccctgcataaattatgcaatgtc-ctaccaactga 44558017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 95
Target Start/End: Original strand, 17777137 - 17777204
Alignment:
Q  28 cacattttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaat 95  Q
    ||||||||||||||| ||||||||||||||  | ||||||||||| |||| |||||| | ||||||||    
T  17777137 cacattttaaatgtggagaagtggggtgtccggggttcgaaccccgacccctgcatataatatacaat 17777204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 110
Target Start/End: Complemental strand, 34107387 - 34107285
Alignment:
Q  9 tagtctagtggctagaactcaca-ttttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcata-aattatacaatgtctctaccaa 106  Q
    ||||||||||||||||| ||||| |||| || ||||| ||||||||||||  ||||||||||| | |||| |||||| |||||||| ||||| || ||||    
T  34107387 tagtctagtggctagaattcacatttttcaaggtgaataagtggggtgtctggagttcgaacctcaacccctgcatataattatac-atgtccctgccaa 34107289  T
Q  107 ctga 110  Q
    ||||    
T  34107288 ctga 34107285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 106
Target Start/End: Complemental strand, 39635423 - 39635318
Alignment:
Q  3 gttaaatagtctagtggct--agaactcacattttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctc 100  Q
    ||||| |||||||||||||  ||| | ||||||||||||||| |||||||| |||||  ||||||||||||| ||||   |||| ||||| |||||| |     
T  39635423 gttaagtagtctagtggctggagatcacacattttaaatgtggagaagtggagtgtctggagttcgaaccccgaccccaacatatattatgcaatgtttt 39635324  T
Q  101 taccaa 106  Q
    ||||||    
T  39635323 taccaa 39635318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 110
Target Start/End: Original strand, 28195089 - 28195190
Alignment:
Q  9 tagtctagtggctagaactcacattttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaact 108  Q
    |||| ||||||||||| ||||||  |||||| || ||||||||||| ||  | ||| |||||||| |||||||||| | ||| |||| || |||||||||    
T  28195089 tagtttagtggctagagctcacacattaaatatggagaagtggggtatccggggttagaacccctgcccttgcatataatatgcaatatccctaccaact 28195188  T
Q  109 ga 110  Q
    ||    
T  28195189 ga 28195190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 98
Target Start/End: Complemental strand, 41246500 - 41246412
Alignment:
Q  9 tagtctagtggctagaactcacattttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtc 98  Q
    ||||||||||||||||  ||||| || ||||||  ||||||||||||||  | |||||||||||  ||||| |||||| |||||||||||    
T  41246500 tagtctagtggctagagttcacaatt-aaatgtagagaagtggggtgtccggggttcgaaccccggcccttacataaactatacaatgtc 41246412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 3439073 - 3438962
Alignment:
Q  1 tggttaaatagtctagtggctagaactcacat--tttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtc 98  Q
    |||| ||||||||||||||||||| ||||||   ||||| |||| |||||||| |||||  | ||||||||||| || | |||||| | ||| |||| ||    
T  3439073 tggtcaaatagtctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccgactcctgcatataatatgcaatatc 3438974  T
Q  99 tctaccaactga 110  Q
     |||||||||||    
T  3438973 cctaccaactga 3438962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 110
Target Start/End: Original strand, 13242711 - 13242787
Alignment:
Q  34 ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    ||||||||| ||||||| ||||||    ||||||||||| |||| |||||||||||| |||| |||||| |||||||    
T  13242711 ttaaatgtggagaagtgaggtgtccgaggttcgaaccccgacccctgcataaattatgcaatatctctatcaactga 13242787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 110
Target Start/End: Original strand, 22653594 - 22653700
Alignment:
Q  6 aaatagtctagtggctagaactca--cattttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctac 103  Q
    ||||||||||||||||||| ||||  || ||||| |||| |||||||| |||||  | ||||||||||| || | |||||| | ||| |||| || ||||    
T  22653594 aaatagtctagtggctagagctcatacaatttaattgtggagaagtggagtgtccggggttcgaaccccgactcctgcatataatatgcaatatccctac 22653693  T
Q  104 caactga 110  Q
    |||||||    
T  22653694 caactga 22653700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 108
Target Start/End: Original strand, 4858686 - 4858755
Alignment:
Q  38 atgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaact 108  Q
    ||||| |||||||||||| | ||| ||||||||||  ||| |||||||||||| ||||||| |||||||||    
T  4858686 atgtggagaagtggggtgccgaga-ttcgaaccccagcccctgcataaattatgcaatgtccctaccaact 4858755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 106
Target Start/End: Complemental strand, 15939385 - 15939307
Alignment:
Q  28 cacattttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaa 106  Q
    ||||||||||||||| |||||||||||||   | ||||||||||  |||  |||||| ||||| |||||||||| ||||    
T  15939385 cacattttaaatgtggagaagtggggtgttcggggttcgaaccctaacctctgcatatattatgcaatgtctctgccaa 15939307  T

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Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 110
Target Start/End: Complemental strand, 36748982 - 36748901
Alignment:
Q  28 cacattttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    ||||||||||||||| |||||||| ||||    |||||||||||| |||| ||||| || ||| ||||||| |||||||||||    
T  36748982 cacattttaaatgtggagaagtggagtgttcgaagttcgaaccccgacccctgcattaa-tatgcaatgtccctaccaactga 36748901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 57
Target Start/End: Original strand, 27463657 - 27463706
Alignment:
Q  8 atagtctagtggctagaactcacattttaaatgtgaagaagtggggtgtc 57  Q
    |||| ||||||| |||||||||||| ||||||||| |||| |||||||||    
T  27463657 atagcctagtggttagaactcacatattaaatgtggagaaatggggtgtc 27463706  T

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Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 111
Target Start/End: Original strand, 32190010 - 32190059
Alignment:
Q  62 gttcgaacccctacccttgcataaattatacaatgtctctaccaactgaa 111  Q
    |||||||||||  ||| |||||||||||| ||||||| ||||||||||||    
T  32190010 gttcgaaccccggcccctgcataaattatgcaatgtccctaccaactgaa 32190059  T

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Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 110
Target Start/End: Original strand, 32609166 - 32609243
Alignment:
Q  33 tttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    ||||| |||| |||||||| |||||  ||||||||||||| || |||||||| | ||| |||| || |||||||||||    
T  32609166 tttaattgtggagaagtggagtgtccggagttcgaaccccgactcttgcatataatatgcaatatccctaccaactga 32609243  T

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Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 44898456 - 44898497
Alignment:
Q  28 cacattttaaatgtgaagaagtggggtgtcaagagttcgaac 69  Q
    ||||||||||||||| ||||||||||||||  ||||||||||    
T  44898456 cacattttaaatgtggagaagtggggtgtccggagttcgaac 44898497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 110
Target Start/End: Original strand, 1027641 - 1027689
Alignment:
Q  62 gttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    ||||||||||  ||||||||||||||||| |||| ||||||| ||||||    
T  1027641 gttcgaaccctgacccttgcataaattatgcaatatctctacaaactga 1027689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 84
Target Start/End: Complemental strand, 1244682 - 1244606
Alignment:
Q  9 tagtctagtggctagaactcacatttta-aatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcata 84  Q
    ||||||||||||||||| |||| ||||  || ||||| ||||||||||||  | ||||||||||| |||| ||||||    
T  1244682 tagtctagtggctagaattcacctttttcaaggtgaataagtggggtgtccggggttcgaacccccacccctgcata 1244606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 72
Target Start/End: Complemental strand, 4659524 - 4659460
Alignment:
Q  9 tagtctagtggctagaactcacattt-taaatgtgaagaagtggggtgtcaagagttcgaacccc 72  Q
    ||||||| |||||||| ||||||  | |||||||| ||||||||||||||  |||||||||||||    
T  4659524 tagtctaatggctagagctcacacatataaatgtggagaagtggggtgtccggagttcgaacccc 4659460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 84
Target Start/End: Complemental strand, 5947962 - 5947906
Alignment:
Q  28 cacattttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcata 84  Q
    ||||||||||||||| || |||||||||||  | ||||||||||| |||| ||||||    
T  5947962 cacattttaaatgtggaggagtggggtgtccggggttcgaaccccgacccctgcata 5947906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 84
Target Start/End: Original strand, 7717579 - 7717635
Alignment:
Q  28 cacattttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcata 84  Q
    ||||||||||||||| |||||||| |||||   |||||||||||| |||| ||||||    
T  7717579 cacattttaaatgtggagaagtggagtgtccgaagttcgaaccccgacccctgcata 7717635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 110
Target Start/End: Original strand, 23919457 - 23919533
Alignment:
Q  34 ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    ||||||||| |||| |||||||||  |  |||||||||| |||| | |||| ||||| ||||||| |||||||||||    
T  23919457 ttaaatgtggagaaatggggtgtctgggattcgaaccccgacccctccatatattatgcaatgtccctaccaactga 23919533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 84
Target Start/End: Complemental strand, 32854628 - 32854572
Alignment:
Q  28 cacattttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcata 84  Q
    ||||||||||||||| |||||| |||||||  | |||||||||||  ||||||||||    
T  32854628 cacattttaaatgtggagaagtagggtgtccggggttcgaaccccggcccttgcata 32854572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 110
Target Start/End: Original strand, 33228890 - 33228989
Alignment:
Q  13 ctagtggctagaactcacat--tttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    |||||||||||| ||||||   ||||| |||| ||||||||||||||  | |||||||||||  ||| |||||| | ||| |||| || |||||||||||    
T  33228890 ctagtggctagagctcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccggcccctgcatataatatgcaatatccctaccaactga 33228989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 110
Target Start/End: Complemental strand, 34125862 - 34125760
Alignment:
Q  9 tagtctagtggctagaactcaca--ttttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaa 106  Q
    |||||||||||||||  ||||||  ||||||||||| |||||| |||||||| | ||| ||||| |   || ||||||||| || ||||||| |||||||    
T  34125862 tagtctagtggctagggctcacacattttaaatgtggagaagt-gggtgtcaggggtttgaacctccgtccctgcataaatcatgcaatgtccctaccaa 34125764  T
Q  107 ctga 110  Q
    ||||    
T  34125763 ctga 34125760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 27425203 - 27425106
Alignment:
Q  10 agtctagtggctagaactcacatt-ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaa 106  Q
    ||||||||||||||| ||||||   |||||||||||||||| |||||||  | ||||||||| || ||| |||||||||||| ||||||| |||||||    
T  27425203 agtctagtggctagagctcacacgattaaatgtgaagaagtcgggtgtccggggttcgaaccactgcccctgcataaattatgcaatgtccctaccaa 27425106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 110
Target Start/End: Original strand, 7836888 - 7836992
Alignment:
Q  7 aatagtctagtggctagaactcacatt-ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctacca 105  Q
    ||||| |||||||||||| ||||||   ||||||||| |||||||| ||||   ||||||||||||| | || |||||||||||||||||||| ||| ||    
T  7836888 aatagcctagtggctagagctcacacaattaaatgtggagaagtggtgtgttcggagttcgaaccccgatccctgcataaattatacaatgtccctatca 7836987  T
Q  106 actga 110  Q
    |||||    
T  7836988 actga 7836992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 34 - 110
Target Start/End: Original strand, 41331059 - 41331135
Alignment:
Q  34 ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    ||||||||| ||||||||||||||  || |||||||||| |||| |||||||||||| ||||||| || ||||||||    
T  41331059 ttaaatgtggagaagtggggtgtccggaattcgaaccccgacccctgcataaattatgcaatgtccctgccaactga 41331135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 110
Target Start/End: Original strand, 45284771 - 45284875
Alignment:
Q  7 aatagtctagtggctagaactcacatt-ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctacca 105  Q
    ||||||||||||| |||| ||||||   ||||||||  ||||||||||||||  | ||||||||||| |||| |||||||||||| ||||||| ||| ||    
T  45284771 aatagtctagtggttagagctcacacaattaaatgttgagaagtggggtgtccggggttcgaaccccgacccctgcataaattattcaatgtccctatca 45284870  T
Q  106 actga 110  Q
    |||||    
T  45284871 actga 45284875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 32 - 110
Target Start/End: Original strand, 28799999 - 28800077
Alignment:
Q  32 ttttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    ||||||||||  ||||||||||||||| | |||| ||||||| ||| |||||||||||| || |||| |||||||||||    
T  28799999 ttttaaatgtagagaagtggggtgtcaggggttcaaacccctgcccctgcataaattatgcattgtccctaccaactga 28800077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 110
Target Start/End: Complemental strand, 38151460 - 38151358
Alignment:
Q  9 tagtctagtggctagaactcacatt-ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaac 107  Q
    |||||||||||||||| ||||||   ||||||||| |||||||||||||  |  ||||||||||| |||| ||||||||| || |||| || ||||||||    
T  38151460 tagtctagtggctagagctcacacaattaaatgtggagaagtggggtgttcatggttcgaaccccgacccctgcataaataatgcaatatccctaccaac 38151361  T
Q  108 tga 110  Q
    |||    
T  38151360 tga 38151358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 110
Target Start/End: Original strand, 7778955 - 7779052
Alignment:
Q  14 tagtggctagaactcacatt-ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    ||||||||||||||||||   ||||||||| |||||||| |||||  | |||||||| ||  | |||||||||||||||||||||| ||| |||||||    
T  7778955 tagtggctagaactcacacaattaaatgtggagaagtggagtgtccggggttcgaactccggcacttgcataaattatacaatgtccctatcaactga 7779052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 98
Target Start/End: Complemental strand, 28059861 - 28059772
Alignment:
Q  10 agtctagtggctagaactcacat-tttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtc 98  Q
    |||||||||||| || ||||||  |||||||||| |||| ||||||||  ||||||||||||||  ||| |||||||||||| |||||||    
T  28059861 agtctagtggcttgagctcacacatttaaatgtggagaattggggtgttcagagttcgaaccccggcccctgcataaattatgcaatgtc 28059772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 34 - 106
Target Start/End: Original strand, 37411717 - 37411789
Alignment:
Q  34 ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaa 106  Q
    ||||||||| ||||||||||||||  |||||| ||| || |||| |||||||||||| ||||||| |||||||    
T  37411717 ttaaatgtggagaagtggggtgtccggagttcaaactccgacccctgcataaattatgcaatgtccctaccaa 37411789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 34 - 110
Target Start/End: Original strand, 40518869 - 40518945
Alignment:
Q  34 ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    ||||||||| ||||||||||||||  ||||||||| ||| |||| | |||| ||||| ||||||| |||||||||||    
T  40518869 ttaaatgtggagaagtggggtgtccggagttcgaatcccaacccctacatatattatgcaatgtccctaccaactga 40518945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 111
Target Start/End: Complemental strand, 48693625 - 48693542
Alignment:
Q  28 cacattttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactgaa 111  Q
    |||||||||||||||||||||||| |  ||  | ||| ||||||| || | |||||| |||||||| |||||||||||||||||    
T  48693625 cacattttaaatgtgaagaagtggagcctctggggtttgaaccccaactcctgcatatattatacactgtctctaccaactgaa 48693542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 32 - 90
Target Start/End: Complemental strand, 28800178 - 28800120
Alignment:
Q  32 ttttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattat 90  Q
    ||||||||||| |||||||||||||||  ||||||||||||| ||| | ||||||||||    
T  28800178 ttttaaatgtggagaagtggggtgtcagaagttcgaacccctgcccctacataaattat 28800120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 9 - 72
Target Start/End: Complemental strand, 34891325 - 34891258
Alignment:
Q  9 tagtctagtggctagaactcaca----ttttaaatgtgaagaagtggggtgtcaagagttcgaacccc 72  Q
    |||||||||||||||||||||||    |||||||| || ||||||||||||||  |||||||||||||    
T  34891325 tagtctagtggctagaactcacacattttttaaatatggagaagtggggtgtccggagttcgaacccc 34891258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 101
Target Start/End: Original strand, 10363373 - 10363466
Alignment:
Q  9 tagtctagtggctagaactcacat-tttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctct 101  Q
    |||||||||| || || ||||||  |||||||||| ||||||| |||||  ||| ||||||| || |||| ||||||||||||||||| |||||    
T  10363373 tagtctagtgactggagctcacacatttaaatgtggagaagtgaggtgttcagacttcgaactccgacccctgcataaattatacaatatctct 10363466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 113
Target Start/End: Original strand, 15639402 - 15639487
Alignment:
Q  28 cacattttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactgaatt 113  Q
    |||||||||| ||||  ||||||||||||   |  |||||||||| || || ||||| | ||||||||||||||||||||||||||    
T  15639402 cacattttaactgtggggaagtggggtgtacgggattcgaaccccaactctagcatataatatacaatgtctctaccaactgaatt 15639487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 110
Target Start/End: Original strand, 15716664 - 15716741
Alignment:
Q  33 tttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    |||||||||||| ||||||||||||   |||||||||||| ||||||||||| | ||  |||| || |||||||||||    
T  15716664 tttaaatgtgaataagtggggtgtccgaagttcgaaccccgacccttgcatataatacgcaatatccctaccaactga 15716741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 98
Target Start/End: Complemental strand, 22774131 - 22774066
Alignment:
Q  33 tttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtc 98  Q
    |||||||||| ||||||||||||||  | ||| |||||||| ||| |||||||||||| |||||||    
T  22774131 tttaaatgtggagaagtggggtgtccggggtttgaacccctgcccctgcataaattatgcaatgtc 22774066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 110
Target Start/End: Original strand, 47440763 - 47440867
Alignment:
Q  9 tagtctagtggctagaactcaca--ttttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattataca-atgtctctacca 105  Q
    ||||||||||||| || ||||||  | || |||||| |||||||||||||| || ||||||||||| |||| |||||| ||||| ||  |||| ||||||    
T  47440763 tagtctagtggctggagctcacacatatttaatgtggagaagtggggtgtccagggttcgaaccccgacccctgcatatattatgcatttgtccctacca 47440862  T
Q  106 actga 110  Q
    |||||    
T  47440863 actga 47440867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 110
Target Start/End: Original strand, 9877224 - 9877323
Alignment:
Q  13 ctagtggctagaactcacat--tttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    |||||||||||||||||||   ||||| |||| ||||||||||||||  | |||||||||||  ||| |||||| | ||| |||| || |||||||||||    
T  9877224 ctagtggctagaactcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccggcccctgcatataatatgcaatatccctaccaactga 9877323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 110
Target Start/End: Original strand, 23102515 - 23102614
Alignment:
Q  13 ctagtggctagaactcacat--tttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    |||||||||||||||||||   ||||| |||| ||||||||||||||  | |||||||||||  ||| |||||| | ||| |||| || |||||||||||    
T  23102515 ctagtggctagaactcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccggcccctgcatataatatgcaatatccctaccaactga 23102614  T

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Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 110
Target Start/End: Complemental strand, 41465924 - 41465848
Alignment:
Q  34 ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    ||||||||| ||||||||||||||  ||||||||||||  |||| |||||| | ||| |||| || |||||||||||    
T  41465924 ttaaatgtggagaagtggggtgtccggagttcgaaccctgacccctgcatataatatgcaatatccctaccaactga 41465848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 110
Target Start/End: Original strand, 44831602 - 44831677
Alignment:
Q  34 ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    ||||||||| |||||||||||||| |  |||||||| |  |||| |||||||||||| ||||||| |||||||||||    
T  44831602 ttaaatgtggagaagtggggtgtctat-gttcgaactctgacccctgcataaattatgcaatgtccctaccaactga 44831677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 84
Target Start/End: Complemental strand, 46758338 - 46758282
Alignment:
Q  28 cacattttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcata 84  Q
    ||||||||||||||| || |||||||||||  ||||||||||||| |||| ||||||    
T  46758338 cacattttaaatgtggaggagtggggtgtccggagttcgaaccccgacccctgcata 46758282  T

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Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 1649273 - 1649202
Alignment:
Q  1 tggttaaatagtctagtggctagaactcac-attttaaatgtgaagaagtggggtgtcaagagttcgaaccc 71  Q
    |||| |||||| ||||||||||||| |||| ||||| || ||||| |||||||||||| || ||||||||||    
T  1649273 tggtcaaatagcctagtggctagaattcaccattttcaaggtgaataagtggggtgtccagggttcgaaccc 1649202  T

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Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 98
Target Start/End: Original strand, 4232553 - 4232647
Alignment:
Q  6 aaatagtctagtggctagaactca--cattttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtc 98  Q
    |||||||||||||| | || ||||  ||||||||||||| ||||| |||||||||   ||||||||| || ||| | |||||||||| |||||||    
T  4232553 aaatagtctagtggttggagctcatacattttaaatgtggagaagcggggtgtcagaggttcgaacctctgcccctacataaattatgcaatgtc 4232647  T

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Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 98
Target Start/End: Complemental strand, 10901741 - 10901670
Alignment:
Q  28 cacattttaaatgtgaagaagtggggtgtcaagagttcgaaccccta-cccttgcataaattatacaatgtc 98  Q
    |||||| |||||||| ||||||||||||| | | ||||||||| ||| ||| |||||||||||| |||||||    
T  10901741 cacattataaatgtggagaagtggggtgttaggggttcgaaccgctatcccctgcataaattatgcaatgtc 10901670  T

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Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 103
Target Start/End: Complemental strand, 41535781 - 41535707
Alignment:
Q  28 cacattttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctac 103  Q
    |||||||||||||||||||||||| || ||  | ||||||||| | ||||||||||| |||||||| |||| ||||    
T  41535781 cacattttaaatgtgaagaagtggagtatc-cgggttcgaacctcgacccttgcatatattatacattgtccctac 41535707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 106
Target Start/End: Original strand, 4232297 - 4232394
Alignment:
Q  9 tagtctagtggctagaactcaca-ttttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaa 106  Q
    |||||||||| ||||||||||||   ||||| |||||||||||| ||||| || ||| |||||||||||  |||||| | ||| |||| ||||||||||    
T  4232297 tagtctagtgactagaactcacacaattaaacgtgaagaagtggagtgtccagggtt-gaacccctacctctgcatataatatgcaatatctctaccaa 4232394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 108
Target Start/End: Complemental strand, 4886924 - 4886856
Alignment:
Q  38 atgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaact 108  Q
    ||||| ||||||||||||||  || |||||||||| ||||||||||||||||| | ||||| |||||||||    
T  4886924 atgtggagaagtggggtgtccgga-ttcgaaccccgacccttgcataaattatgccatgtc-ctaccaact 4886856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 110
Target Start/End: Original strand, 9712172 - 9712254
Alignment:
Q  28 cacattttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    |||| ||||| |||| ||||||||||||||  | ||||||||||| |||| |||||| | ||| |||| || |||||||||||    
T  9712172 cacaatttaattgtggagaagtggggtgtccggggttcgaaccccgacccctgcatataatatgcaatatccctaccaactga 9712254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 110
Target Start/End: Complemental strand, 12935852 - 12935754
Alignment:
Q  13 ctagtggctagaactcacatt-ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    |||||||||||| ||||||   ||||||||| |||||||||| |||  | |||||||||||  ||| | |||||||||| ||||||| || ||||||||    
T  12935852 ctagtggctagagctcacacaattaaatgtggagaagtggggcgtctggggttcgaaccccatcccctacataaattatgcaatgtccctgccaactga 12935754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 95
Target Start/End: Complemental strand, 27788360 - 27788298
Alignment:
Q  33 tttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaat 95  Q
    |||||||||| ||||||||||||||  | |||||||||||  ||| |||||||||||| ||||    
T  27788360 tttaaatgtggagaagtggggtgtctggggttcgaaccccggcccctgcataaattatgcaat 27788298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 95
Target Start/End: Complemental strand, 27791516 - 27791454
Alignment:
Q  33 tttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaat 95  Q
    |||||||||| ||||||||||||||  | |||||||||||  ||| |||||||||||| ||||    
T  27791516 tttaaatgtggagaagtggggtgtctggggttcgaaccccggcccctgcataaattatgcaat 27791454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 110
Target Start/End: Complemental strand, 35499653 - 35499551
Alignment:
Q  9 tagtctagtggctagaactcacatt-ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaac 107  Q
    ||||||||||| |||| ||||||   |||||||| |||||||||||| ||  |||||| ||| || |||  |||||||| ||| ||||||| ||||||||    
T  35499653 tagtctagtggttagagctcacacaattaaatgtaaagaagtggggtatccggagttcaaactccaaccactgcataaactatgcaatgtccctaccaac 35499554  T
Q  108 tga 110  Q
    |||    
T  35499553 tga 35499551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 113
Target Start/End: Original strand, 39956382 - 39956460
Alignment:
Q  35 taaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactgaatt 113  Q
    |||||||| |||||||||||||||   |||||||||  | |||||||||||||||| |||| |  ||||||| ||||||    
T  39956382 taaatgtggagaagtggggtgtcagaggttcgaaccattgcccttgcataaattatgcaatattcctaccaattgaatt 39956460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 108
Target Start/End: Complemental strand, 47438024 - 47437950
Alignment:
Q  34 ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaact 108  Q
    ||||||||| |||||||| |||||  | ||| |||||||| ||| |||||||||||| ||||||  |||||||||    
T  47438024 ttaaatgtggagaagtggagtgtccggggtttgaacccctgcccctgcataaattatgcaatgttcctaccaact 47437950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 34 - 111
Target Start/End: Complemental strand, 25155631 - 25155554
Alignment:
Q  34 ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactgaa 111  Q
    ||||||||| |||||||||||||| || ||||||||||| | || |||||||| ||| || | ||| | |||||||||    
T  25155631 ttaaatgtggagaagtggggtgtccagggttcgaaccccgaaccctgcataaaatatgcattatctttgccaactgaa 25155554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 43119389 - 43119461
Alignment:
Q  13 ctagtggctagaactcacat--tttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcat 83  Q
    |||||||||||| ||||||   ||||| |||| |||||||||||||| || ||||||||||| |||| |||||    
T  43119389 ctagtggctagagctcacacaatttaattgtggagaagtggggtgtccagggttcgaaccccgacccctgcat 43119461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 84
Target Start/End: Complemental strand, 2366438 - 2366394
Alignment:
Q  40 gtgaagaagtggggtgtcaagagttcgaacccctacccttgcata 84  Q
    ||||| |||||||||||| |||||||||||||| |||| ||||||    
T  2366438 gtgaataagtggggtgtctagagttcgaaccccgacccctgcata 2366394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 110
Target Start/End: Complemental strand, 7876088 - 7876013
Alignment:
Q  34 ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    |||| |||| ||||||||||||||  ||||| ||||||   |||| ||||||||||| ||||||| |||||||||||    
T  7876088 ttaattgtggagaagtggggtgtctggagtttgaacccgatccct-gcataaattatgcaatgtccctaccaactga 7876013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 106
Target Start/End: Complemental strand, 10646251 - 10646183
Alignment:
Q  38 atgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaa 106  Q
    ||||| ||||||||||||||    |||| |||||||||||||||||||| ||| |||| || |||||||    
T  10646251 atgtggagaagtggggtgtccgaggttcaaacccctacccttgcataaaatatgcaatatccctaccaa 10646183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 110
Target Start/End: Original strand, 19752925 - 19753024
Alignment:
Q  13 ctagtggctagaactcacat--tttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    |||||||||||||||||||   || || |||| |||||||| ||||| || |||||||||||  ||| |||||| | ||| |||| || |||||||||||    
T  19752925 ctagtggctagaactcacacaattaaattgtggagaagtggagtgtccagggttcgaaccccggcccctgcatataatatgcaatatccctaccaactga 19753024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 110
Target Start/End: Complemental strand, 22548301 - 22548225
Alignment:
Q  34 ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    ||||||||| |||||||||||||   | ||||||||||  |||| || ||||||||| |||||||  ||||||||||    
T  22548301 ttaaatgtggagaagtggggtgttcggggttcgaaccctgacccctgtataaattatgcaatgtccttaccaactga 22548225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 110
Target Start/End: Complemental strand, 35645712 - 35645613
Alignment:
Q  13 ctagtggctagaactcacat--tttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    |||||||||||| ||||||   ||||| |||| |||||||| ||||| || |||||||||||  | | |||||| | |||||||| || |||||||||||    
T  35645712 ctagtggctagagctcacacaatttaattgtggagaagtggagtgtccagggttcgaaccccggctcctgcatataatatacaatatccctaccaactga 35645613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 110
Target Start/End: Complemental strand, 36932063 - 36931987
Alignment:
Q  34 ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    ||||||||  ||||||||||||||  | |||||||||||   || |||||||||||| ||||||| || ||||||||    
T  36932063 ttaaatgtagagaagtggggtgtccggggttcgaaccccggaccctgcataaattatgcaatgtccctgccaactga 36931987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 110
Target Start/End: Complemental strand, 41854107 - 41854011
Alignment:
Q  15 agtggctagaactcacatt-ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    |||||||||| |||||||  ||||||||| ||||| ||||||||  | ||| |||| ||  ||| |||||||||||| ||||||| || ||||||||    
T  41854107 agtggctagagctcacataattaaatgtggagaagcggggtgtccggggtttgaactccgtcccctgcataaattatgcaatgtccctgccaactga 41854011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 93929 - 94005
Alignment:
Q  3 gttaaatagtctagtggctagaactca--cattttaaatgtgaagaagtggggtgtcaagagttcgaacccctaccc 77  Q
    |||||||||||||||||||||| ||||  || ||||| |||| ||||||||||||||  ||||||||||||| ||||    
T  93929 gttaaatagtctagtggctagagctcatacaatttaattgtggagaagtggggtgtccggagttcgaaccccaaccc 94005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 15119 - 15019
Alignment:
Q  11 gtctagtggctagaactcacatt-ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactg 109  Q
    ||||||| |||||| |||||||  ||||||||| |||||||||||||   | |||||||||   |||| |||||||||||| ||||||| ||||||||||    
T  15119 gtctagtagctagagctcacataattaaatgtggagaagtggggtgtttggggttcgaaccatgacccctgcataaattatgcaatgtccctaccaactg 15020  T
Q  110 a 110  Q
    |    
T  15019 a 15019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 95
Target Start/End: Complemental strand, 24492 - 24409
Alignment:
Q  13 ctagtggctagaactcacat-tttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaat 95  Q
    |||||||||||| ||||||  ||||||||||||||||||| |||||  | |||||||||||  ||| |||||||||||| ||||    
T  24492 ctagtggctagagctcacacatttaaatgtgaagaagtggagtgtccggggttcgaaccccggcccctgcataaattatgcaat 24409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0257 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0257
Description:

Target: scaffold0257; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 110
Target Start/End: Complemental strand, 21906 - 21808
Alignment:
Q  13 ctagtggctagaactcacatt-ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    |||||||||||||||||||   ||||||||| |||| |||||||||  |  ||||| ||||  ||| |||||||||||||||||||  ||| |||||||    
T  21906 ctagtggctagaactcacaaaattaaatgtggagaattggggtgtccgggattcgatccccggcccctgcataaattatacaatgtgcctatcaactga 21808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 110
Target Start/End: Original strand, 28801 - 28877
Alignment:
Q  34 ttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    ||||||||| ||||||||||||||  | |||||||||||  ||| |||||||| |||  |||||| ||| |||||||    
T  28801 ttaaatgtggagaagtggggtgtccggggttcgaaccccggcccctgcataaagtatgtaatgtccctatcaactga 28877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 110
Target Start/End: Original strand, 10783 - 10882
Alignment:
Q  13 ctagtggctagaactcacat--tttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaactga 110  Q
    |||||||||||| ||||||   ||||| |||| ||||||||||||||  | |||||||||||  ||| |||||| | ||| |||| || |||||||||||    
T  10783 ctagtggctagagctcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccggcccctgcatataatatgcaatatccctaccaactga 10882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 110
Target Start/End: Complemental strand, 46027 - 45924
Alignment:
Q  9 tagtctagtggctagaactcacat--tttaaatgtgaagaagtggggtgtcaagagttcgaacccctacccttgcataaattatacaatgtctctaccaa 106  Q
    |||| ||||||||||||||||||   || || |||| |||||||| |||||  | | ||||||||| |||| |||||| | |||| ||| ||||||||||    
T  46027 tagtttagtggctagaactcacacaattaaattgtggagaagtggagtgtctggggctcgaaccccgacccctgcatataatatataatatctctaccaa 45928  T
Q  107 ctga 110  Q
    ||||    
T  45927 ctga 45924  T

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