View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6516_high_6 (Length: 215)
Name: NF6516_high_6
Description: NF6516
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6516_high_6 |
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Alignment Details
Target: chr1 (Bit Score: 140; Significance: 2e-73; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 52 - 199
Target Start/End: Complemental strand, 39518650 - 39518503
Alignment:
| Q |
52 |
atttggtatcctatttggaacttcaaaaccaaaccttatgttacaaattacgacacaaactgataaccacaatcataattcgaaagatgacgcccacatc |
151 |
Q |
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| T |
39518650 |
atttggtatcctatttggaacttcaaaaccaaaccttatgttacaaattacgacacaaactgataaccacaatcataattcgaaagatgacgcccacatc |
39518551 |
T |
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| Q |
152 |
aacactttatttaaataagtgtgctaacttaatataatggaccttcat |
199 |
Q |
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| T |
39518550 |
aacactttatttaaataagtatgctaacttaataaaatggaccttcat |
39518503 |
T |
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