View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6518_high_41 (Length: 245)
Name: NF6518_high_41
Description: NF6518
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6518_high_41 |
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Alignment Details
Target: chr7 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 28266831 - 28266609
Alignment:
| Q |
1 |
gtttacatcagagtggtaacaggtaggaaagcattcactctgaagtgaattaaaatatctgtataccacacaacatagtgttaatcattatactaatgta |
100 |
Q |
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| T |
28266831 |
gtttacatcagagtggtaacaggtaggaaagcattcactctgaagtgaattaaaatatctgtataccacacaacatagtgttaatcattatactaatgta |
28266732 |
T |
|
| Q |
101 |
agaacctttgtgagatcactttaaatgcgtattcttttctaatccatgactatcagatgtttgaaattgtactgaaaaatcacaaattattatgttattt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28266731 |
agaacctttgtgagatcactttaaatgcgtattcttttctaatccatgactatcagatgtttgaaattgtactgaaaaatcacaaattattatgttattt |
28266632 |
T |
|
| Q |
201 |
cacaaagatacgtactaaatgag |
223 |
Q |
| |
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||||||||||||||||||||||| |
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|
| T |
28266631 |
cacaaagatacgtactaaatgag |
28266609 |
T |
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