View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6518_high_52 (Length: 209)
Name: NF6518_high_52
Description: NF6518
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6518_high_52 |
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Alignment Details
Target: chr1 (Bit Score: 169; Significance: 8e-91; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 169; E-Value: 8e-91
Query Start/End: Original strand, 15 - 191
Target Start/End: Original strand, 51717939 - 51718115
Alignment:
| Q |
15 |
aatattttttgagattagtatgcgcagttgtgtgtttaatatatcttgatttatcataaagtggatatacttgaaacacaattttacggttcattaataa |
114 |
Q |
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| T |
51717939 |
aatattttttgagattagtatgcacagttgtgtgtttaatatatcttgatttatcataaagtggatatacttgaaacacaattttacggttcattaataa |
51718038 |
T |
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| Q |
115 |
agagttggccaatcaaagcacatcttatatttagcattaaagagctttgttcctcgcttaattctaaatgcaattca |
191 |
Q |
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| T |
51718039 |
agagttggccaatcaaagcacgtcttatatttagcattaaagagctttgttcctcgcttaattctaaatgcaattca |
51718115 |
T |
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