View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6518_low_12 (Length: 440)

Name: NF6518_low_12
Description: NF6518
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6518_low_12
NF6518_low_12
[»] chr3 (33 HSPs)
chr3 (1-422)||(11831937-11832346)
chr3 (92-224)||(214063-214194)
chr3 (103-200)||(10798321-10798418)
chr3 (92-196)||(22813320-22813424)
chr3 (95-222)||(7791859-7791986)
chr3 (1-84)||(20421651-20421734)
chr3 (92-230)||(53655421-53655560)
chr3 (1-71)||(12252083-12252153)
chr3 (86-236)||(34706590-34706740)
chr3 (92-222)||(44911627-44911757)
chr3 (2-57)||(4657451-4657506)
chr3 (6-84)||(19431735-19431812)
chr3 (115-203)||(9774216-9774304)
chr3 (1-85)||(11829222-11829306)
chr3 (123-198)||(52223459-52223534)
chr3 (9-62)||(30104262-30104315)
chr3 (3-83)||(5348148-5348228)
chr3 (100-188)||(8475190-8475278)
chr3 (3-62)||(19659157-19659216)
chr3 (87-237)||(27243070-27243218)
chr3 (99-178)||(44225901-44225980)
chr3 (115-178)||(49720068-49720131)
chr3 (1-55)||(19631310-19631364)
chr3 (130-196)||(21175557-21175623)
chr3 (8-57)||(13836469-13836518)
chr3 (7-83)||(8605660-8605735)
chr3 (115-167)||(13809132-13809184)
chr3 (15-55)||(25660903-25660943)
chr3 (15-55)||(25667308-25667348)
chr3 (15-55)||(25673713-25673753)
chr3 (15-55)||(25680138-25680178)
chr3 (15-55)||(25688442-25688482)
chr3 (88-135)||(41707548-41707593)
[»] chr6 (16 HSPs)
chr6 (92-224)||(26170911-26171043)
chr6 (92-220)||(25326859-25326987)
chr6 (92-220)||(26159394-26159522)
chr6 (101-236)||(6163527-6163662)
chr6 (1-83)||(14672260-14672342)
chr6 (3-71)||(18558156-18558224)
chr6 (2-57)||(14894553-14894608)
chr6 (1-83)||(16896805-16896887)
chr6 (1-62)||(18027840-18027901)
chr6 (1-83)||(15514629-15514709)
chr6 (18-62)||(10975680-10975724)
chr6 (24-83)||(19724697-19724756)
chr6 (19-57)||(14355809-14355847)
chr6 (19-57)||(22868250-22868288)
chr6 (6-42)||(9296631-9296667)
chr6 (7-83)||(22461478-22461554)
[»] chr4 (26 HSPs)
chr4 (92-230)||(5994882-5995020)
chr4 (92-173)||(3976404-3976485)
chr4 (87-237)||(27654502-27654650)
chr4 (102-237)||(51904623-51904758)
chr4 (100-190)||(3888640-3888730)
chr4 (86-237)||(51339972-51340122)
chr4 (92-230)||(37586480-37586618)
chr4 (92-237)||(8567802-8567947)
chr4 (92-167)||(8586545-8586620)
chr4 (17-72)||(28801577-28801632)
chr4 (95-198)||(32949582-32949685)
chr4 (1-62)||(9567328-9567389)
chr4 (1-83)||(9652759-9652839)
chr4 (100-237)||(19447167-19447304)
chr4 (97-137)||(16318437-16318477)
chr4 (7-70)||(21982727-21982790)
chr4 (84-237)||(21776852-21777003)
chr4 (128-237)||(5545642-5545751)
chr4 (19-84)||(10375333-10375398)
chr4 (4-83)||(19821110-19821188)
chr4 (92-177)||(26001458-26001543)
chr4 (92-176)||(5027464-5027547)
chr4 (200-236)||(27654488-27654524)
chr4 (116-224)||(28304036-28304144)
chr4 (205-237)||(35923986-35924018)
chr4 (185-237)||(38537521-38537573)
[»] chr8 (24 HSPs)
chr8 (92-224)||(45524896-45525028)
chr8 (85-235)||(37927482-37927632)
chr8 (123-253)||(24683630-24683760)
chr8 (1-83)||(15887064-15887146)
chr8 (1-83)||(18829972-18830054)
chr8 (100-178)||(28485447-28485525)
chr8 (1-72)||(24625628-24625699)
chr8 (115-237)||(13407331-13407453)
chr8 (1-83)||(20496145-20496227)
chr8 (3-57)||(25281821-25281875)
chr8 (97-191)||(42473994-42474088)
chr8 (7-83)||(23539649-23539725)
chr8 (115-237)||(45218524-45218646)
chr8 (82-196)||(14636071-14636185)
chr8 (3-85)||(23543196-23543278)
chr8 (101-178)||(16314341-16314418)
chr8 (115-196)||(34366741-34366822)
chr8 (92-133)||(38091399-38091440)
chr8 (19-83)||(22982144-22982208)
chr8 (100-167)||(6387597-6387664)
chr8 (100-143)||(8914807-8914850)
chr8 (88-228)||(29011079-29011217)
chr8 (145-178)||(15905372-15905405)
chr8 (89-141)||(6891571-6891623)
[»] chr2 (33 HSPs)
chr2 (92-237)||(19193510-19193655)
chr2 (92-200)||(42669774-42669882)
chr2 (93-176)||(19953424-19953507)
chr2 (115-253)||(18949186-18949324)
chr2 (92-237)||(6420462-6420605)
chr2 (1-57)||(18996005-18996061)
chr2 (85-175)||(385050-385140)
chr2 (100-237)||(31494242-31494379)
chr2 (92-152)||(8163552-8163612)
chr2 (130-190)||(37078026-37078086)
chr2 (92-167)||(20458939-20459014)
chr2 (134-198)||(4024759-4024823)
chr2 (2-62)||(20511079-20511139)
chr2 (192-238)||(17505934-17505980)
chr2 (1-71)||(45572795-45572864)
chr2 (1-71)||(45576462-45576531)
chr2 (1-71)||(45580129-45580198)
chr2 (1-71)||(45583796-45583865)
chr2 (1-71)||(45587463-45587532)
chr2 (1-71)||(45591130-45591199)
chr2 (1-71)||(45594797-45594866)
chr2 (1-71)||(45598464-45598533)
chr2 (1-71)||(45602131-45602200)
chr2 (1-71)||(45605798-45605867)
chr2 (1-71)||(45609465-45609534)
chr2 (1-71)||(45613132-45613201)
chr2 (1-71)||(45616799-45616868)
chr2 (8-57)||(23836046-23836095)
chr2 (205-254)||(43400126-43400175)
chr2 (192-236)||(9682776-9682820)
chr2 (119-175)||(10681233-10681289)
chr2 (3-83)||(28775001-28775080)
chr2 (185-237)||(42579664-42579716)
[»] chr5 (20 HSPs)
chr5 (85-246)||(25002004-25002165)
chr5 (88-230)||(36325462-36325603)
chr5 (85-200)||(23260216-23260331)
chr5 (139-237)||(41034437-41034535)
chr5 (106-237)||(6529881-6530012)
chr5 (92-167)||(10299913-10299988)
chr5 (86-190)||(7585008-7585112)
chr5 (1-57)||(19315718-19315774)
chr5 (1-57)||(24516775-24516831)
chr5 (1-62)||(22826944-22827005)
chr5 (1-57)||(17170336-17170392)
chr5 (3-83)||(22446795-22446875)
chr5 (16-71)||(18223374-18223429)
chr5 (95-189)||(43461423-43461517)
chr5 (100-183)||(6645136-6645219)
chr5 (5-72)||(31480307-31480373)
chr5 (130-196)||(5630560-5630626)
chr5 (183-237)||(32401236-32401290)
chr5 (1-70)||(19858752-19858821)
chr5 (205-253)||(17190601-17190649)
[»] chr1 (28 HSPs)
chr1 (115-237)||(40125850-40125968)
chr1 (92-236)||(18473677-18473821)
chr1 (2-84)||(21981571-21981653)
chr1 (87-191)||(15741861-15741965)
chr1 (123-211)||(11247829-11247917)
chr1 (4-72)||(21424036-21424104)
chr1 (96-224)||(25010025-25010152)
chr1 (115-200)||(7549636-7549722)
chr1 (120-200)||(33234462-33234542)
chr1 (87-175)||(14340990-14341076)
chr1 (1-62)||(23475195-23475256)
chr1 (95-191)||(18953218-18953313)
chr1 (91-178)||(21970344-21970431)
chr1 (130-196)||(2592970-2593036)
chr1 (1-55)||(18621240-18621294)
chr1 (17-83)||(19507723-19507789)
chr1 (2-84)||(21979353-21979435)
chr1 (19-81)||(49996617-49996678)
chr1 (1-54)||(21721008-21721061)
chr1 (84-171)||(13114743-13114828)
chr1 (3-83)||(20408755-20408835)
chr1 (7-55)||(22615880-22615928)
chr1 (205-236)||(14341059-14341090)
chr1 (115-178)||(18157089-18157152)
chr1 (89-143)||(44807121-44807175)
chr1 (8-85)||(17023789-17023866)
chr1 (207-251)||(18157034-18157078)
chr1 (7-83)||(20839178-20839253)
[»] chr7 (25 HSPs)
chr7 (83-198)||(44350174-44350289)
chr7 (92-196)||(23434724-23434827)
chr7 (86-237)||(46994370-46994521)
chr7 (95-237)||(2911792-2911934)
chr7 (92-198)||(24845476-24845582)
chr7 (84-237)||(24539130-24539281)
chr7 (85-155)||(32721016-32721086)
chr7 (93-174)||(33852540-33852621)
chr7 (84-237)||(17749716-17749867)
chr7 (1-70)||(11773292-11773361)
chr7 (94-167)||(29462079-29462152)
chr7 (3-83)||(13761014-13761094)
chr7 (7-62)||(18083283-18083338)
chr7 (1-83)||(12193169-12193250)
chr7 (128-237)||(20954743-20954852)
chr7 (3-83)||(16095592-16095672)
chr7 (100-196)||(39523611-39523707)
chr7 (97-224)||(25003393-25003520)
chr7 (31-81)||(15308083-15308133)
chr7 (88-237)||(27888308-27888454)
chr7 (10-83)||(13378317-13378390)
chr7 (24-85)||(16197716-16197777)
chr7 (19-83)||(17223379-17223442)
chr7 (88-167)||(17354604-17354681)
chr7 (198-250)||(34281056-34281108)
[»] scaffold0228 (3 HSPs)
scaffold0228 (1-81)||(6310-6390)
scaffold0228 (1-81)||(13892-13972)
scaffold0228 (1-81)||(23844-23924)
[»] scaffold0111 (1 HSPs)
scaffold0111 (3-83)||(25305-25385)
[»] scaffold0039 (1 HSPs)
scaffold0039 (1-83)||(8629-8711)
[»] scaffold0238 (1 HSPs)
scaffold0238 (115-196)||(15240-15321)
[»] scaffold0193 (1 HSPs)
scaffold0193 (18-83)||(19685-19750)
[»] scaffold0338 (1 HSPs)
scaffold0338 (8-57)||(9849-9898)
[»] scaffold0014 (1 HSPs)
scaffold0014 (1-62)||(202215-202275)
[»] scaffold0050 (1 HSPs)
scaffold0050 (3-55)||(78006-78058)
[»] scaffold0021 (2 HSPs)
scaffold0021 (19-83)||(16774-16838)
scaffold0021 (19-83)||(26305-26369)
[»] scaffold0183 (1 HSPs)
scaffold0183 (3-46)||(20127-20170)
[»] scaffold0007 (1 HSPs)
scaffold0007 (7-70)||(204099-204162)
[»] scaffold0005 (1 HSPs)
scaffold0005 (205-236)||(296847-296878)
[»] scaffold0001 (1 HSPs)
scaffold0001 (18-57)||(151241-151280)
[»] scaffold0886 (1 HSPs)
scaffold0886 (92-178)||(3273-3359)
[»] scaffold0412 (1 HSPs)
scaffold0412 (1-55)||(3983-4037)
[»] scaffold0018 (1 HSPs)
scaffold0018 (1-83)||(61860-61942)
[»] scaffold0673 (1 HSPs)
scaffold0673 (8-57)||(6184-6233)
[»] scaffold0117 (1 HSPs)
scaffold0117 (8-57)||(10905-10954)
[»] scaffold0035 (2 HSPs)
scaffold0035 (8-57)||(108801-108850)
scaffold0035 (8-57)||(117302-117351)
[»] scaffold0020 (1 HSPs)
scaffold0020 (17-62)||(109096-109141)
[»] scaffold0006 (1 HSPs)
scaffold0006 (105-162)||(36191-36248)
[»] scaffold1932 (1 HSPs)
scaffold1932 (4-44)||(771-811)
[»] scaffold0315 (1 HSPs)
scaffold0315 (7-83)||(11859-11935)


Alignment Details
Target: chr3 (Bit Score: 252; Significance: 1e-140; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 1 - 422
Target Start/End: Complemental strand, 11832346 - 11831937
Alignment:
Q  1 agagacaaataattacatacaagcacatataaacacacataaaaattaattaaaatagttctgacgaaaatcaggttgttacatggacactctctcttca 100  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||  |||||||| | ||||||||| |||||||||| ||||    
T  11832346 agagacaaataatcacatacaagcacatataaacatacataaaaattaattaaaataattctagcgaaaatcggattgttacatagacactctcttttca 11832247  T
Q  101 acactcattctctcattggataaaaccaatgtatgacccaccaatttaagtggaatccatttccaaaatgtgagacccgccataatttaagtcaattaaa 200  Q
    |||||||||||||||||||||||| ||||| ||| |||||||||||||||| ||| |||||||||||||| || |||| |||||||||||||||||||||    
T  11832246 acactcattctctcattggataaa-ccaatatataacccaccaatttaagtagaacccatttccaaaatgcgaaacccaccataatttaagtcaattaaa 11832148  T
Q  201 gaacgagtgttagagagagtgttgaaaagaaagtgttcatatcatttctcaaaaatattgaggcgttacaagagggttcctgttggaagatccacaa--- 297  Q
     |||||||||||||||              ||||||||||| ||||||||||||||||||| |||||||  ||||| ||||||| ||||||||||||       
T  11832147 aaacgagtgttagaga--------------aagtgttcataacatttctcaaaaatattgatgcgttactggaggggtcctgttagaagatccacaataa 11832062  T
Q  298 gagagagaaaattaaaatgtatgtgagagagagtaataaatattatgaggcggtgcggacaaactattgtaattattgtaatatcctgtcaatttcatag 397  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  11832061 gagagagaaaattaaaatgtatgtgagagagagtaataagtattatgatgcggtgcggacaaactgttgtaattattgtaatatcctgtcaatttcatag 11831962  T
Q  398 tatatgccataaatatataagacat 422  Q
    |||||||||||||||||||||||||    
T  11831961 tatatgccataaatatataagacat 11831937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 92 - 224
Target Start/End: Original strand, 214063 - 214194
Alignment:
Q  92 ctctcttcaacactcattctctcattggataaaaccaatgtatgacccaccaatttaagtggaatccatttccaaaatgtgagacccgccataatttaag 191  Q
    |||||||||||||||||||||| |||||||||| ||||| |||||||||||| ||||| |||| ||| |||||||| ||||||||||  |||| |||||     
T  214063 ctctcttcaacactcattctcttattggataaa-ccaatatatgacccaccactttaaatggagtccctttccaaagtgtgagacccatcatattttaaa 214161  T
Q  192 tcaattaaagaacgagtgttagagagagtgttg 224  Q
    ||||||||| |  |||||||  |||||||||||    
T  214162 tcaattaaaaagtgagtgttgaagagagtgttg 214194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 103 - 200
Target Start/End: Complemental strand, 10798418 - 10798321
Alignment:
Q  103 actcattctctcattggataaaaccaatgtatgacccaccaatttaagtggaatccatttccaaaatgtgagacccgccataatttaagtcaattaaa 200  Q
    ||||||||||  ||||||||||||||||||||||||||||| |||||||||||  |||||||||| | |||||||| | |||||||||| ||||||||    
T  10798418 actcattctcgtattggataaaaccaatgtatgacccaccactttaagtggaactcatttccaaagtatgagacccacaataatttaagccaattaaa 10798321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 92 - 196
Target Start/End: Complemental strand, 22813424 - 22813320
Alignment:
Q  92 ctctcttcaacactcattctctcattggataaaaccaatgtatgacccaccaatttaagtggaatccatttccaaaatgtgagacccgccataatttaag 191  Q
    ||||||| |||||||||| ||||||||||| ||  ||||||||||||||||| ||| ||||||| ||||||| ||| |||||||| | |||| |||||||    
T  22813424 ctctcttgaacactcattttctcattggatgaatgcaatgtatgacccaccacttttagtggaacccatttcgaaagtgtgagactcaccatgatttaag 22813325  T
Q  192 tcaat 196  Q
     ||||    
T  22813324 ccaat 22813320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 95 - 222
Target Start/End: Original strand, 7791859 - 7791986
Alignment:
Q  95 tcttcaacactcattctctcattggataaaaccaatgtatgacccaccaatttaagtggaatccatttccaaaatgtgagacccgccataatttaagtca 194  Q
    |||||||| |||| | ||| ||||| | |||||||||| |||||||||| ||||||||||||| ||||||||| |||||||||| |  | ||||||| ||    
T  7791859 tcttcaacgctcactttctaattggcttaaaccaatgtgtgacccaccactttaagtggaatctatttccaaagtgtgagacccactgtgatttaagcca 7791958  T
Q  195 attaaagaacgagtgttagagagagtgt 222  Q
    |||| | |  ||||||| ||||||||||    
T  7791959 attagaaagtgagtgttggagagagtgt 7791986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 20421651 - 20421734
Alignment:
Q  1 agagacaaataattacatacaagcacatataaacacacataaaaattaattaaaatagttctgacgaaaatcaggttgttacat 84  Q
    |||||||| |||| || |||||||||||||||||||| |||||||||||||||||||  ||| ||||||||| | |||||||||    
T  20421651 agagacaattaatcacgtacaagcacatataaacacatataaaaattaattaaaataaatctaacgaaaatcggattgttacat 20421734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 92 - 230
Target Start/End: Complemental strand, 53655560 - 53655421
Alignment:
Q  92 ctctcttcaacactca-ttctctcattggataaaaccaatgtatgacccaccaatttaagtggaatccatttccaaaatgtgagacccgccataatttaa 190  Q
    |||||||||||||||| || | | ||||| | |||||||||| |||||||||| ||||||||||| |||||| |||| ||||||| |  | || ||||||    
T  53655560 ctctcttcaacactcacttttttaattggcttaaaccaatgtgtgacccaccattttaagtggaacccattttcaaagtgtgagatcaactatgatttaa 53655461  T
Q  191 gtcaattaaagaacgagtgttagagagagtgttgaaaaga 230  Q
    | |||||| | |  ||||||| ||||||||||||||||||    
T  53655460 gccaattagaaagtgagtgttggagagagtgttgaaaaga 53655421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 12252153 - 12252083
Alignment:
Q  1 agagacaaataattacatacaagcacatataaacacacataaaaattaattaaaatagttctgacgaaaat 71  Q
    |||||||||||||  ||||||||||||||| ||||||||||| |||||||||||||| ||||  |||||||    
T  12252153 agagacaaataatcgcatacaagcacatatgaacacacataataattaattaaaataattctagcgaaaat 12252083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 86 - 236
Target Start/End: Complemental strand, 34706740 - 34706590
Alignment:
Q  86 gacactctctcttcaacactcattctctcattggataaaaccaatgtatgacccaccaatttaagtggaatccatttccaaaatgtgagacccgccataa 185  Q
    |||||||||| ||||||||||| | ||| ||| | | ||| |||||| |||||||||| |||||| |||| ||||||||||| ||||||| || |||| |    
T  34706740 gacactctcttttcaacactcactttctaatttgcttaaatcaatgtgtgacccaccactttaagcggaacccatttccaaagtgtgagatccaccatga 34706641  T
Q  186 tttaagtcaattaaagaacgagtgttagagagagtgttgaaaagaaagtgt 236  Q
    ||||||  ||||| | |  | ||||| |||| |||||| |||||| |||||    
T  34706640 tttaagcaaattagaaagtgggtgttggagatagtgttcaaaagagagtgt 34706590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 92 - 222
Target Start/End: Complemental strand, 44911757 - 44911627
Alignment:
Q  92 ctctcttcaacactcattctctcattggataaaaccaatgtatgacccaccaatttaagtggaatccatttccaaaatgtgagacccgccataatttaag 191  Q
    ||||||| |||||| ||| | | ||||||||||| |||| |||||| |||||||||||||||||   ||||| ||| | |||||||| |||| |||||||    
T  44911757 ctctctttaacacttatttttttattggataaaatcaatatatgacacaccaatttaagtggaacatatttctaaagtatgagacccaccatgatttaag 44911658  T
Q  192 tcaattaaagaacgagtgttagagagagtgt 222  Q
     |||||||| |  ||||||| || |||||||    
T  44911657 ccaattaaaaagtgagtgttggatagagtgt 44911627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 4657451 - 4657506
Alignment:
Q  2 gagacaaataattacatacaagcacatataaacacacataaaaattaattaaaata 57  Q
    ||||||| |||| |||||||||||||||||||||||||||| || |||||||||||    
T  4657451 gagacaattaatcacatacaagcacatataaacacacataataaataattaaaata 4657506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 6 - 84
Target Start/End: Original strand, 19431735 - 19431812
Alignment:
Q  6 caaataattacatacaagcacatataaacacacataaaaattaattaaaatagttctgacgaaaatcaggttgttacat 84  Q
    |||||||| ||||||||||||||||||||||| | |||||||||||||||||  |||  |||||| | |||||||||||    
T  19431735 caaataatcacatacaagcacatataaacacata-aaaaattaattaaaataaatctagcgaaaaacgggttgttacat 19431812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 115 - 203
Target Start/End: Original strand, 9774216 - 9774304
Alignment:
Q  115 attggataaaaccaatgtatgacccaccaatttaagtggaatccatttccaaaatgtgagacccgccataatttaagtcaattaaagaa 203  Q
    ||||||| |||  |||||| | ||||||| ||||||||||| | |||| ||||||||||||||| || |||||||| ||||| ||||||    
T  9774216 attggatgaaattaatgtacgtcccaccactttaagtggaaccaattttcaaaatgtgagacccaccttaatttaaatcaataaaagaa 9774304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 11829222 - 11829306
Alignment:
Q  1 agagacaaataattacatacaagcacatataaacacacataaaaattaattaaaatagttctgacgaaaatcaggttgttacatg 85  Q
    ||||| ||||||| ||||||||| | |||||||||||||||| ||||||| ||| ||  |||  |||||||| ||||||||||||    
T  11829222 agagataaataatcacatacaagaatatataaacacacataataattaataaaagtaaatctagcgaaaatcgggttgttacatg 11829306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 123 - 198
Target Start/End: Original strand, 52223459 - 52223534
Alignment:
Q  123 aaaccaatgtatgacccaccaatttaagtggaatccatttccaaaatgtgagacccgccataatttaagtcaatta 198  Q
    |||||||||| |||| ||||| |||||||  || ||||||||||| |||||||||| |||  ||||||||||||||    
T  52223459 aaaccaatgtgtgacacaccactttaagtataacccatttccaaagtgtgagacccaccacgatttaagtcaatta 52223534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 30104315 - 30104262
Alignment:
Q  9 ataattacatacaagcacatataaacacacataaaaattaattaaaatagttct 62  Q
    ||||| |||||||| |||||||||||||||||||  ||||||||||||| ||||    
T  30104315 ataatcacatacaaacacatataaacacacataatcattaattaaaataattct 30104262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 83
Target Start/End: Original strand, 5348148 - 5348228
Alignment:
Q  3 agacaaataattacatacaagcacatataaacacacataaaaattaattaaaatagttctgacgaaaatcaggttgttaca 83  Q
    |||||| |||| | ||||||| |||||||||||||||||| || ||||||||||| ||||  ||||||   ||||||||||    
T  5348148 agacaattaatcatatacaagtacatataaacacacataataaataattaaaataattctagcgaaaaatgggttgttaca 5348228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 188
Target Start/End: Original strand, 8475190 - 8475278
Alignment:
Q  100 aacactcattctctcattggataaaaccaatgtatgacccaccaatttaagtggaatccatttccaaaatgtgagacccgccataattt 188  Q
    |||| ||| ||||| ||||||| |||| |||||||| | ||||  ||||| ||||| ||||||||||| |||||||||| || ||||||    
T  8475190 aacattcactctcttattggatgaaactaatgtatgtctcaccgctttaaatggaacccatttccaaagtgtgagacccaccttaattt 8475278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 19659216 - 19659157
Alignment:
Q  3 agacaaataattacatacaagcacatataaacacacataaaaattaattaaaatagttct 62  Q
    |||||| |||| ||| | |||||||||||||||||||||| || ||||||||||| ||||    
T  19659216 agacaattaatcacacaaaagcacatataaacacacataataaataattaaaataattct 19659157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 87 - 237
Target Start/End: Original strand, 27243070 - 27243218
Alignment:
Q  87 acactctctcttcaacactcattctctcattggataaaaccaatgtatgacccaccaatttaagtggaatccatttccaaaatgtgagacccgccataat 186  Q
    |||||||||||  |||||||| ||| | ||||||||||| ||||| ||| ||||||| |||| ||||  |||||||||||| |||  ||||| |  | ||    
T  27243070 acactctctct--aacactcactcttttattggataaaatcaatgcatgtcccaccactttatgtgggttccatttccaaagtgtatgacccacattgat 27243167  T
Q  187 ttaagtcaattaaagaacgagtgttagagagagtgttgaaaagaaagtgtt 237  Q
    ||||  |||| | |||  |||| ||||| |||||||| |||||| ||||||    
T  27243168 ttaacccaatgagagagtgagtattagaaagagtgttcaaaagagagtgtt 27243218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 99 - 178
Target Start/End: Complemental strand, 44225980 - 44225901
Alignment:
Q  99 caacactcattctctcattggataaaaccaatgtatgacccaccaatttaagtggaatccatttccaaaatgtgagaccc 178  Q
    ||||||||| ||||| ||||||| |||| | |||||| |||| || ||||||||||| |||||| |||  ||||||||||    
T  44225980 caacactcactctcttattggatgaaactagtgtatgtcccatcactttaagtggaacccattttcaatgtgtgagaccc 44225901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 115 - 178
Target Start/End: Complemental strand, 49720131 - 49720068
Alignment:
Q  115 attggataaaaccaatgtatgacccaccaatttaagtggaatccatttccaaaatgtgagaccc 178  Q
    ||||||| |||  |||||||  ||||||| ||||||||||| ||||||||||| ||||||||||    
T  49720131 attggattaaatgaatgtatatcccaccattttaagtggaacccatttccaaagtgtgagaccc 49720068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 19631364 - 19631310
Alignment:
Q  1 agagacaaataattacatacaagcacatataaacacacataaaaattaattaaaa 55  Q
    |||||||| |||| ||| |||||||||||||||||||||||| || ||| |||||    
T  19631364 agagacaattaatcacacacaagcacatataaacacacataataaataaataaaa 19631310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 130 - 196
Target Start/End: Original strand, 21175557 - 21175623
Alignment:
Q  130 tgtatgacccaccaatttaagtggaatccatttccaaaatgtgagacccgccataatttaagtcaat 196  Q
    |||||||||||||| ||| | || ||||||||| |||| | |||||||| |||||||||||| ||||    
T  21175557 tgtatgacccaccattttgaatgaaatccattttcaaagtatgagacccaccataatttaagccaat 21175623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 57
Target Start/End: Original strand, 13836469 - 13836518
Alignment:
Q  8 aataattacatacaagcacatataaacacacataaaaattaattaaaata 57  Q
    |||||| ||| |||||||||||||||||||||  |||| |||||||||||    
T  13836469 aataatcacacacaagcacatataaacacacaataaaagtaattaaaata 13836518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 7 - 83
Target Start/End: Original strand, 8605660 - 8605735
Alignment:
Q  7 aaataattacatacaagcacatataaacacacataaaaattaattaaaatagttctgacgaaaatcaggttgttaca 83  Q
    ||||||| ||| ||||||||||| ||||||| || ||||  ||||||||||  |||  |||||||||||||||||||    
T  8605660 aaataatcacacacaagcacataaaaacacatattaaaac-aattaaaataaatctagcgaaaatcaggttgttaca 8605735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 115 - 167
Target Start/End: Original strand, 13809132 - 13809184
Alignment:
Q  115 attggataaaaccaatgtatgacccaccaatttaagtggaatccatttccaaa 167  Q
    ||||||||||| ||||||||| ||||||| |||| ||||  ||||||||||||    
T  13809132 attggataaaatcaatgtatgtcccaccattttatgtgggttccatttccaaa 13809184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 55
Target Start/End: Complemental strand, 25660943 - 25660903
Alignment:
Q  15 acatacaagcacatataaacacacataaaaattaattaaaa 55  Q
    ||||||||||||||||||||| |||||| |||||| |||||    
T  25660943 acatacaagcacatataaacatacataataattaaataaaa 25660903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 55
Target Start/End: Complemental strand, 25667348 - 25667308
Alignment:
Q  15 acatacaagcacatataaacacacataaaaattaattaaaa 55  Q
    ||||||||||||||||||||| |||||| |||||| |||||    
T  25667348 acatacaagcacatataaacatacataataattaaataaaa 25667308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 55
Target Start/End: Complemental strand, 25673753 - 25673713
Alignment:
Q  15 acatacaagcacatataaacacacataaaaattaattaaaa 55  Q
    ||||||||||||||||||||| |||||| |||||| |||||    
T  25673753 acatacaagcacatataaacatacataataattaaataaaa 25673713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 55
Target Start/End: Complemental strand, 25680178 - 25680138
Alignment:
Q  15 acatacaagcacatataaacacacataaaaattaattaaaa 55  Q
    ||||||||||||||||||||| |||||| |||||| |||||    
T  25680178 acatacaagcacatataaacatacataataattaaataaaa 25680138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 55
Target Start/End: Complemental strand, 25688482 - 25688442
Alignment:
Q  15 acatacaagcacatataaacacacataaaaattaattaaaa 55  Q
    ||||||||||||||||||||| |||||| |||||| |||||    
T  25688482 acatacaagcacatataaacatacataataattaaataaaa 25688442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 88 - 135
Target Start/End: Complemental strand, 41707593 - 41707548
Alignment:
Q  88 cactctctcttcaacactcattctctcattggataaaaccaatgtatg 135  Q
    ||||||||||  |||||||| ||||||||||||||||| |||||||||    
T  41707593 cactctctct--aacactcactctctcattggataaaatcaatgtatg 41707548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 77; Significance: 1e-35; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 92 - 224
Target Start/End: Complemental strand, 26171043 - 26170911
Alignment:
Q  92 ctctcttcaacactcattctctcattggataaaaccaatgtatgacccaccaatttaagtggaatccatttccaaaatgtgagacccgccataatttaag 191  Q
    |||| ||||||||||||| ||| ||||||||||| ||||||||||||||||| ||||||||||| ||||||||||| ||||| |||| ||||||||||||    
T  26171043 ctcttttcaacactcattttcttattggataaaatcaatgtatgacccaccactttaagtggaacccatttccaaagtgtgaaacccaccataatttaag 26170944  T
Q  192 tcaattaaagaacgagtgttagagagagtgttg 224  Q
    ||| ||||| |  ||||||| ||||||||||||    
T  26170943 tcagttaaaaagtgagtgttggagagagtgttg 26170911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 92 - 220
Target Start/End: Original strand, 25326859 - 25326987
Alignment:
Q  92 ctctcttcaacactcattctctcattggataaaaccaatgtatgacccaccaatttaagtggaatccatttccaaaatgtgagacccgccataatttaag 191  Q
    |||||||||||||||||| ||| ||||||||||| ||||||||||||||||| ||||||||||| ||||||||||| ||  | |||| ||||||||||||    
T  25326859 ctctcttcaacactcattttcttattggataaaatcaatgtatgacccaccactttaagtggaacccatttccaaagtgcaaaacccaccataatttaag 25326958  T
Q  192 tcaattaaagaacgagtgttagagagagt 220  Q
      ||||||| |  ||||||| ||||||||    
T  25326959 ctaattaaaaagtgagtgttggagagagt 25326987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 92 - 220
Target Start/End: Original strand, 26159394 - 26159522
Alignment:
Q  92 ctctcttcaacactcattctctcattggataaaaccaatgtatgacccaccaatttaagtggaatccatttccaaaatgtgagacccgccataatttaag 191  Q
    |||||||||||||||||| ||| ||||||||||| ||||||||||||||||| ||||||||||| ||||||||||| ||  | |||| ||||||||||||    
T  26159394 ctctcttcaacactcattttcttattggataaaatcaatgtatgacccaccactttaagtggaacccatttccaaagtgcaaaacccaccataatttaag 26159493  T
Q  192 tcaattaaagaacgagtgttagagagagt 220  Q
      ||||||| |  ||||||| ||||||||    
T  26159494 ctaattaaaaagtgagtgttggagagagt 26159522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 101 - 236
Target Start/End: Complemental strand, 6163662 - 6163527
Alignment:
Q  101 acactcattctctcattggataaaaccaatgtatgacccaccaatttaagtggaatccatttccaaaatgtgagacccgccataatttaagtcaattaaa 200  Q
    ||||||||| | | ||||| | |||||||||| |||||||||| ||||||| |||  |||||||||| |||||||| | | || ||||||| ||||||||    
T  6163662 acactcattttttaattggcttaaaccaatgtttgacccaccactttaagtagaactcatttccaaagtgtgagacgcactatgatttaagccaattaaa 6163563  T
Q  201 gaacgagtgttagagagagtgttgaaaagaaagtgt 236  Q
     |  |||||||||||||| | ||||||||| |||||    
T  6163562 aagtgagtgttagagagaatattgaaaagagagtgt 6163527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 14672260 - 14672342
Alignment:
Q  1 agagacaaataattacatacaagcacatataaacacacataaaaattaattaaaatagttctgacgaaaatcaggttgttaca 83  Q
    |||| ||| |||| ||||||||||||||||||| ||| |||||||||||||||||||  ||| ||||||||| ||||||||||    
T  14672260 agaggcaattaatcacatacaagcacatataaatacatataaaaattaattaaaataaatctaacgaaaatcgggttgttaca 14672342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 18558156 - 18558224
Alignment:
Q  3 agacaaataattacatacaagcacatataaacacacataaaaattaattaaaatagttctgacgaaaat 71  Q
    ||||||||||  ||||||||||||||||||||| |||||| |||||||||||||| |||| ||||||||    
T  18558156 agacaaataaacacatacaagcacatataaacatacataataattaattaaaataattctaacgaaaat 18558224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 14894553 - 14894608
Alignment:
Q  2 gagacaaataattacatacaagcacatataaacacacataaaaattaattaaaata 57  Q
    |||||||||||| | |||||||||||||||||||||||||| || |||||||||||    
T  14894553 gagacaaataatcatatacaagcacatataaacacacataataaataattaaaata 14894608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 16896805 - 16896887
Alignment:
Q  1 agagacaaataattacatacaagcacatataaacacacataaaaattaattaaaatagttctgacgaaaatcaggttgttaca 83  Q
    |||||||| | || |||||||||||||||||||||||||||| || ||||||||||| |||| || |||| | || |||||||    
T  16896805 agagacaattcatcacatacaagcacatataaacacacataataaataattaaaataattctaacaaaaaacgggatgttaca 16896887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 18027901 - 18027840
Alignment:
Q  1 agagacaaataattacatacaagcacatataaacacacataaaaattaattaaaatagttct 62  Q
    ||||| ||||||| ||| |||||||||||||||||||||||| || ||||||||||| ||||    
T  18027901 agagataaataatcacacacaagcacatataaacacacataataaataattaaaataattct 18027840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 15514709 - 15514629
Alignment:
Q  1 agagacaaataattacatacaagcacatataaacacacataaaaattaattaaaatagttctgacgaaaatcaggttgttaca 83  Q
    |||| ||| |||| ||||||||||| |||||||||||  ||||||||||||||||||  ||| |||||||||| | |||||||    
T  15514709 agaggcaattaatcacatacaagcatatataaacaca--taaaaattaattaaaataaatctaacgaaaatcaagctgttaca 15514629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 10975680 - 10975724
Alignment:
Q  18 tacaagcacatataaacacacataaaaattaattaaaatagttct 62  Q
    |||||||| |||||||||||||||| |||||||||||||| ||||    
T  10975680 tacaagcatatataaacacacataataattaattaaaataattct 10975724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 19724756 - 19724697
Alignment:
Q  24 cacatataaacacacataaaaattaattaaaatagttctgacgaaaatcaggttgttaca 83  Q
    |||||| ||||| ||||||||| ||||||||||| ||||  |||||| ||||||||||||    
T  19724756 cacatacaaacatacataaaaagtaattaaaataattctaccgaaaaacaggttgttaca 19724697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 57
Target Start/End: Original strand, 14355809 - 14355847
Alignment:
Q  19 acaagcacatataaacacacataaaaattaattaaaata 57  Q
    |||||||||||||||||||||||| || |||||||||||    
T  14355809 acaagcacatataaacacacataataaataattaaaata 14355847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 57
Target Start/End: Original strand, 22868250 - 22868288
Alignment:
Q  19 acaagcacatataaacacacataaaaattaattaaaata 57  Q
    ||||||||||||||||||||| ||||| |||||||||||    
T  22868250 acaagcacatataaacacacaaaaaaagtaattaaaata 22868288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 6 - 42
Target Start/End: Original strand, 9296631 - 9296667
Alignment:
Q  6 caaataattacatacaagcacatataaacacacataa 42  Q
    |||||||| ||||||||||||||||||| ||||||||    
T  9296631 caaataatcacatacaagcacatataaatacacataa 9296667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 7 - 83
Target Start/End: Complemental strand, 22461554 - 22461478
Alignment:
Q  7 aaataattacatacaagcacatataaacacacataaaaattaattaaaatagttctgacgaaaatcaggttgttaca 83  Q
    ||||||| ||| ||||||||||||||||||| || ||||  | | |||||| ||||  |||||||| ||||||||||    
T  22461554 aaataatcacacacaagcacatataaacacatattaaaacgattaaaaataattctagcgaaaatcgggttgttaca 22461478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 75; Significance: 2e-34; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 92 - 230
Target Start/End: Complemental strand, 5995020 - 5994882
Alignment:
Q  92 ctctcttcaacactcattctctcattggataaaaccaatgtatgacccaccaatttaagtggaatccatttccaaaatgtgagacccgccataatttaag 191  Q
    ||||||| |||||||||||||| |||||||||||| |||||||||| ||||| ||||||||||| ||||||||||  |||||||||| |||| |||||||    
T  5995020 ctctctttaacactcattctcttattggataaaactaatgtatgactcaccactttaagtggaacccatttccaatgtgtgagacccaccatgatttaag 5994921  T
Q  192 tcaattaaagaacgagtgttagagagagtgttgaaaaga 230  Q
    ||||||| | |  || |||| ||||||||||||||||||    
T  5994920 tcaattagaaagtgaatgttggagagagtgttgaaaaga 5994882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 92 - 173
Target Start/End: Complemental strand, 3976485 - 3976404
Alignment:
Q  92 ctctcttcaacactcattctctcattggataaaaccaatgtatgacccaccaatttaagtggaatccatttccaaaatgtga 173  Q
    |||||||||||||||||||||| ||| |||||||||||||||||| |||||| ||||||||||| ||||||| |||||||||    
T  3976485 ctctcttcaacactcattctcttatttgataaaaccaatgtatgatccaccattttaagtggaacccatttctaaaatgtga 3976404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 87 - 237
Target Start/End: Original strand, 27654502 - 27654650
Alignment:
Q  87 acactctctcttcaacactcattctctcattggataaaaccaatgtatgacccaccaatttaagtggaatccatttccaaaatgtgagacccgccataat 186  Q
    |||||||||||  |||||||||||||| |||||||||||| |||||||| ||||||| ||||||||||| ||||||||||  ||||| | || || | ||    
T  27654502 acactctctct--aacactcattctcttattggataaaactaatgtatgtcccaccactttaagtggaacccatttccaacgtgtgaaatccaccttgat 27654599  T
Q  187 ttaagtcaattaaagaacgagtgttagagagagtgttgaaaagaaagtgtt 237  Q
    ||||  |||| | | |  ||||||| |||||||||||||||||| ||||||    
T  27654600 ttaaaccaataataaattgagtgtttgagagagtgttgaaaagagagtgtt 27654650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 102 - 237
Target Start/End: Complemental strand, 51904758 - 51904623
Alignment:
Q  102 cactcattctctcattggataaaaccaatgtatgacccaccaatttaagtggaatccatttccaaaatgtgagacccgccataatttaagtcaattaaag 201  Q
    |||||||||||| ||| ||| ||| |||||||||||||| || ||||||||||| | |||| |||| |||||||||| |||| ||||||| ||||  |||    
T  51904758 cactcattctcttattagatgaaatcaatgtatgacccatcactttaagtggaacctatttacaaagtgtgagacccaccatgatttaagccaat--aag 51904661  T
Q  202 aacg--agtgttagagagagtgttgaaaagaaagtgtt 237  Q
    || |  ||||||||||||||||||||||||| ||||||    
T  51904660 aatgtaagtgttagagagagtgttgaaaagagagtgtt 51904623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 100 - 190
Target Start/End: Original strand, 3888640 - 3888730
Alignment:
Q  100 aacactcattctctcattggataaaaccaatgtatgacccaccaatttaagtggaatccatttccaaaatgtgagacccgccataatttaa 190  Q
    |||||||| ||||| |||||| ||||  |||||||| ||||| ||||||||||||| ||||||||||| ||||||||||||| ||||||||    
T  3888640 aacactcactctcttattggagaaaattaatgtatgtcccactaatttaagtggaacccatttccaaattgtgagacccgccttaatttaa 3888730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 86 - 237
Target Start/End: Complemental strand, 51340122 - 51339972
Alignment:
Q  86 gacactctctcttcaacactcattctctcattggataaaaccaatgtatgacccaccaatttaagtggaatccatttccaaaatgtgagacccgccataa 185  Q
    |||||||||||||||||| ||||||| | ||| ||| ||||||||||| ||||||||  |||||||| || | ||||||||| |||||||||| | || |    
T  51340122 gacactctctcttcaacattcattcttttatttgatgaaaccaatgtacgacccaccgctttaagtgaaacctatttccaaagtgtgagacccactatga 51340023  T
Q  186 tttaagtcaattaaagaacgagtgttagagagagtgttgaaaagaaagtgtt 237  Q
    |||||| |||| | | || |||||| | |||||||||| |||| | ||||||    
T  51340022 tttaagccaataagaaaatgagtgtga-agagagtgttaaaaaaagagtgtt 51339972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 92 - 230
Target Start/End: Complemental strand, 37586618 - 37586480
Alignment:
Q  92 ctctcttcaacactcattctctcattggataaaaccaatgtatgacccaccaatttaagtggaatccatttccaaaatgtgagacccgccataatttaag 191  Q
    |||| ||||||||||| | | | ||||| | |||||||| | |||||||||| ||||||||||  |||||| |||| |||||||||| |||| |||||||    
T  37586618 ctctattcaacactcactttttaattggcttaaaccaatatgtgacccaccactttaagtggatcccattttcaaagtgtgagacccaccatgatttaag 37586519  T
Q  192 tcaattaaagaacgagtgttagagagagtgttgaaaaga 230  Q
      ||||| | |  ||||||| ||||||||||||||||||    
T  37586518 ctaattagaaagtgagtgttggagagagtgttgaaaaga 37586480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 92 - 237
Target Start/End: Original strand, 8567802 - 8567947
Alignment:
Q  92 ctctcttcaacactcattctctcattggataaaaccaatgtatgacccaccaatttaagtggaatccatttccaaaatgtgagacccgccataatttaag 191  Q
    |||||||||||| ||||||||| |||| || |||||| |||||||||||||| ||| ||||||||||||| |||||   || ||| || ||| |||||||    
T  8567802 ctctcttcaacattcattctcttattgcatgaaaccattgtatgacccaccactttgagtggaatccattcccaaagcatgcgactcgtcatgatttaag 8567901  T
Q  192 tcaattaaagaacgagtgttagagagagtgttgaaaagaaagtgtt 237  Q
     || | ||| |  ||||| |||||| ||||||||||| | ||||||    
T  8567902 ccattaaaaaagtgagtggtagagaaagtgttgaaaatagagtgtt 8567947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 92 - 167
Target Start/End: Original strand, 8586545 - 8586620
Alignment:
Q  92 ctctcttcaacactcattctctcattggataaaaccaatgtatgacccaccaatttaagtggaatccatttccaaa 167  Q
    |||||||||||| ||||||||| |||| || |||||| |||||||||||||| ||| ||||||||||||| |||||    
T  8586545 ctctcttcaacattcattctcttattgcatgaaaccattgtatgacccaccactttgagtggaatccattcccaaa 8586620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 17 - 72
Target Start/End: Original strand, 28801577 - 28801632
Alignment:
Q  17 atacaagcacatataaacacacataaaaattaattaaaatagttctgacgaaaatc 72  Q
    |||||||||||||||||||||||||| |||||||||||||| ||||  ||||||||    
T  28801577 atacaagcacatataaacacacataataattaattaaaataattctagcgaaaatc 28801632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 95 - 198
Target Start/End: Original strand, 32949582 - 32949685
Alignment:
Q  95 tcttcaacactcattctctcattggataaaaccaatgtatgacccaccaatttaagtggaatccatttccaaaatgtgagacccgccataatttaagtca 194  Q
    |||| |||||||||| | | |||||||||||| ||||||||| |||||| ||||| |||||   ||||||||| ||| |||||| |||| ||||||| ||    
T  32949582 tctttaacactcatttttttattggataaaactaatgtatgatccaccactttaactggaactaatttccaaagtgtaagacccaccatgatttaagcca 32949681  T
Q  195 atta 198  Q
    ||||    
T  32949682 atta 32949685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 9567328 - 9567389
Alignment:
Q  1 agagacaaataattacatacaagcacatataaacacacataaaaattaattaaaatagttct 62  Q
    ||||||||||||| |||||||  ||||||||| ||||||||| |||||||||||||| ||||    
T  9567328 agagacaaataatcacatacagacacatataaccacacataataattaattaaaataattct 9567389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 9652759 - 9652839
Alignment:
Q  1 agagacaaataattacatacaagcacatataaacacacataaaaattaattaaaatagttctgacgaaaatcaggttgttaca 83  Q
    |||||||| || | ||||| ||||||||||||||||  |||||||||||||||||||  ||| |||||||  |||||||||||    
T  9652759 agagacaattagtcacataaaagcacatataaacac--ataaaaattaattaaaataaatctaacgaaaaagaggttgttaca 9652839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 100 - 237
Target Start/End: Original strand, 19447167 - 19447304
Alignment:
Q  100 aacactcattctctcattggataaaaccaatgtatgacccaccaatttaagtggaatccatttccaaaatgtgagacccgccataatttaagtcaattaa 199  Q
    ||||| || ||||| ||||| | ||||||||||||| ||||||| |||| ||||  ||||||| |||||||   ||||  | || |||||| |||||||     
T  19447167 aacacccactctcttattgggtgaaaccaatgtatgtcccaccactttatgtgggttccattttcaaaatgcaggaccgacaatgatttaactcaattag 19447266  T
Q  200 agaacgagtgttagagagagtgttgaaaagaaagtgtt 237  Q
    |||  |||| ||| |||||||||| |||||| ||||||    
T  19447267 agagtgagtattaaagagagtgttcaaaagagagtgtt 19447304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 137
Target Start/End: Original strand, 16318437 - 16318477
Alignment:
Q  97 ttcaacactcattctctcattggataaaaccaatgtatgac 137  Q
    ||||||||||||||||| ||||||||||| |||||||||||    
T  16318437 ttcaacactcattctcttattggataaaatcaatgtatgac 16318477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 70
Target Start/End: Original strand, 21982727 - 21982790
Alignment:
Q  7 aaataattacatacaagcacatataaacacacataaaaattaattaaaatagttctgacgaaaa 70  Q
    ||||||| | |||||||||||||||| ||||||||| || ||| ||||||| |||| |||||||    
T  21982727 aaataatcatatacaagcacatataagcacacataataaataaataaaataattctaacgaaaa 21982790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 84 - 237
Target Start/End: Complemental strand, 21777003 - 21776852
Alignment:
Q  84 tggacactctctcttcaacactcattctctcattggataaaaccaatgtatgacccaccaatttaagtggaatccatttccaaaatgtgagacccgccat 183  Q
    ||||||||||||||  |||| ||| ||| | ||||||||||| ||||||||| || |||| |||| ||||| |  |||||||||||||  |||||         
T  21777003 tggacactctctct--aacattcactcttttattggataaaatcaatgtatgtcctaccactttatgtggattttatttccaaaatgtatgacccatatc 21776906  T
Q  184 aatttaagtcaattaaagaacgagtgttagagagagtgttgaaaagaaagtgtt 237  Q
     |||||| || || | |||| ||||||||||||||||||  |||||| ||||||    
T  21776905 gatttaattcgatgagagaatgagtgttagagagagtgtcaaaaagagagtgtt 21776852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 128 - 237
Target Start/End: Original strand, 5545642 - 5545751
Alignment:
Q  128 aatgtatgacccaccaatttaagtggaatccatttccaaaatgtgagacccgccataatttaagtcaattaaagaacgagtgttagagagagtgttgaaa 227  Q
    |||||||| ||||||| |||| ||||  ||||||| |||||||| |||||| |  | |||||||  ||||||| |   ||| |||||||||||||| |||    
T  5545642 aatgtatgtcccaccactttatgtgggctccattttcaaaatgtaagacccacattgatttaagcaaattaaaaagtaagtattagagagagtgttcaaa 5545741  T
Q  228 agaaagtgtt 237  Q
    ||| ||||||    
T  5545742 agagagtgtt 5545751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 10375333 - 10375398
Alignment:
Q  19 acaagcacatataaacacacataaaaattaattaaaatagttctgacgaaaatcaggttgttacat 84  Q
    ||||||||||||||||||| || ||||  | | |||||| |||| ||||||||| |||||||||||    
T  10375333 acaagcacatataaacacatattaaaacaattaaaaataattctaacgaaaatcgggttgttacat 10375398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 83
Target Start/End: Complemental strand, 19821188 - 19821110
Alignment:
Q  4 gacaaataattacatacaagcacatataaacacacataaaaattaatt-aaaatagttctgacgaaaatcaggttgttaca 83  Q
    |||||||||| |||||| |||||||||||||||  ||||||  ||||| |||||| |||| |||||| ||||| |||||||    
T  19821188 gacaaataatcacataccagcacatataaacacgtataaaa--taattaaaaataattctaacgaaattcaggctgttaca 19821110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 92 - 177
Target Start/End: Original strand, 26001458 - 26001543
Alignment:
Q  92 ctctcttcaacactcattctctcattggataaaaccaatgtatgacccaccaatttaagtggaatccatttccaaaatgtgagacc 177  Q
    |||||||||||| ||||||| | |||||||||||  ||||||||| ||| || ||||| || ||  ||||| |||| |||||||||    
T  26001458 ctctcttcaacattcattcttttattggataaaagtaatgtatgatccatcactttaaatgaaactcattttcaaagtgtgagacc 26001543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 92 - 176
Target Start/End: Complemental strand, 5027547 - 5027464
Alignment:
Q  92 ctctcttcaacactcattctctcattggataaaaccaatgtatgacccaccaatttaagtggaatccatttccaaaatgtgagac 176  Q
    ||||||| |||||||||| | | |||||||  || |||| ||||||||| || ||||||| ||||| |||| |||||||||||||    
T  5027547 ctctctttaacactcatttttt-attggatgtaatcaatatatgacccatcactttaagttgaatcgattttcaaaatgtgagac 5027464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 200 - 236
Target Start/End: Complemental strand, 27654524 - 27654488
Alignment:
Q  200 agaacgagtgttagagagagtgttgaaaagaaagtgt 236  Q
    |||| |||||||||||||||||||||||||| |||||    
T  27654524 agaatgagtgttagagagagtgttgaaaagagagtgt 27654488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 116 - 224
Target Start/End: Complemental strand, 28304144 - 28304036
Alignment:
Q  116 ttggataaaaccaatgtatgacccaccaatttaagtggaatccatttccaaaatgtgagacccgccataatttaagtcaattaaagaacgagtgttagag 215  Q
    |||||| ||| ||||| ||| ||||||| ||| |||||  ||||||| |||| |||| || || || | |||||||||||| ||| |  | |||||||||    
T  28304144 ttggatgaaatcaatgcatgtcccaccacttttagtggggtccattttcaaagtgtgtgatccaccttgatttaagtcaataaaaaagtgggtgttagag 28304045  T
Q  216 agagtgttg 224  Q
    |||||||||    
T  28304044 agagtgttg 28304036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 237
Target Start/End: Original strand, 35923986 - 35924018
Alignment:
Q  205 gagtgttagagagagtgttgaaaagaaagtgtt 237  Q
    |||||||||||| ||||||||||||||||||||    
T  35923986 gagtgttagagaaagtgttgaaaagaaagtgtt 35924018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 185 - 237
Target Start/End: Complemental strand, 38537573 - 38537521
Alignment:
Q  185 atttaagtcaattaaagaacgagtgttagagagagtgttgaaaagaaagtgtt 237  Q
    |||||| ||||| |||||| || | |||||||||||||| |||||||||||||    
T  38537573 atttaaatcaataaaagaatgattattagagagagtgttcaaaagaaagtgtt 38537521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 73; Significance: 3e-33; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 92 - 224
Target Start/End: Complemental strand, 45525028 - 45524896
Alignment:
Q  92 ctctcttcaacactcattctctcattggataaaaccaatgtatgacccaccaatttaagtggaatccatttccaaaatgtgagacccgccataatttaag 191  Q
    |||||||||||||||||| ||| ||||||||||| ||||||||||||||||| ||| ||||||| ||||||||||| ||||| |||| |||| |||||||    
T  45525028 ctctcttcaacactcattttcttattggataaaatcaatgtatgacccaccactttgagtggaacccatttccaaagtgtgaaacccaccatgatttaag 45524929  T
Q  192 tcaattaaagaacgagtgttagagagagtgttg 224  Q
     |||||||| |  ||||||| ||||||||||||    
T  45524928 ccaattaaaaagtgagtgttggagagagtgttg 45524896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 85 - 235
Target Start/End: Complemental strand, 37927632 - 37927482
Alignment:
Q  85 ggacactctctcttcaacactcattctctcattggataaaaccaatgtatgacccaccaatttaagtggaatccatttccaaaatgtgagacccgccata 184  Q
    |||||||||||||||||||||||||||||  |||||| ||||||||||||||| || || ||||||| | ||| |||||||||||||||||| | | ||     
T  37927632 ggacactctctcttcaacactcattctcttgttggatgaaaccaatgtatgactcatcactttaagtagtatctatttccaaaatgtgagactcactatg 37927533  T
Q  185 atttaagtcaattaaagaacgagtgttagagagagtgttgaaaagaaagtg 235  Q
    ||||||| |||| ||| || |||| || |||||| |||| |||||| ||||    
T  37927532 atttaagccaataaaaaaatgagtattggagagaatgttaaaaagagagtg 37927482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 123 - 253
Target Start/End: Original strand, 24683630 - 24683760
Alignment:
Q  123 aaaccaatgtatgacccaccaatttaagtggaatccatttccaaaatgtgagacccgccataatttaagtcaattaaagaacgagtgttagagagagtgt 222  Q
    |||||||||| |||||||||| ||||||||||| ||||||||||||||||||||||  ||| ||||||| |||| | | |  ||||||| |||| |||||    
T  24683630 aaaccaatgtgtgacccaccactttaagtggaacccatttccaaaatgtgagacccatcatgatttaagccaatcagaaagtgagtgttggagatagtgt 24683729  T
Q  223 tgaaaagaaagtgttcatatcatttctcaaa 253  Q
    |||||||| ||||| | || |||| ||||||    
T  24683730 tgaaaagagagtgtccctagcattcctcaaa 24683760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 15887064 - 15887146
Alignment:
Q  1 agagacaaataattacatacaagcacatataaacacacataaaaattaattaaaatagttctgacgaaaatcaggttgttaca 83  Q
    |||||||| |||| |||||||||  ||||||||||| ||||| || ||||||||||| |||||||||||| ||||||||||||    
T  15887064 agagacaattaatcacatacaagtgcatataaacacgcataataaataattaaaataattctgacgaaaaacaggttgttaca 15887146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 18830054 - 18829972
Alignment:
Q  1 agagacaaataattacatacaagcacatataaacacacataaaaattaattaaaatagttctgacgaaaatcaggttgttaca 83  Q
    |||||||| |||||||||||||||||||||||| |||||||| || ||||||||||| || |  |||||| ||||||||||||    
T  18830054 agagacaattaattacatacaagcacatataaatacacataataaataattaaaataattatagcgaaaaacaggttgttaca 18829972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 100 - 178
Target Start/End: Complemental strand, 28485525 - 28485447
Alignment:
Q  100 aacactcattctctcattggataaaaccaatgtatgacccaccaatttaagtggaatccatttccaaaatgtgagaccc 178  Q
    |||||| ||||||| ||||||| |||  |||||||| ||||||| ||||||||||| ||||||||||| ||||||||||    
T  28485525 aacacttattctcttattggatgaaattaatgtatgtcccaccactttaagtggaacccatttccaaagtgtgagaccc 28485447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 24625628 - 24625699
Alignment:
Q  1 agagacaaataattacatacaagcacatataaacacacataaaaattaattaaaatagttctgacgaaaatc 72  Q
    ||||||||||||| ||||||||||||||||||||||| |||| || ||| ||||||| ||||  ||||||||    
T  24625628 agagacaaataatcacatacaagcacatataaacacatataataaataaataaaataattctagcgaaaatc 24625699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 115 - 237
Target Start/End: Complemental strand, 13407453 - 13407331
Alignment:
Q  115 attggataaaaccaatgtatgacccaccaatttaagtggaatccatttccaaaatgtgagacccgccataatttaagtcaattaaagaacgagtgttaga 214  Q
    ||||||||||| ||||||||| ||||||| |||||||||  || |||| |||| |||  ||||| |  | ||||||  |||| | |||| ||||||||||    
T  13407453 attggataaaatcaatgtatgtcccaccattttaagtgggttctattttcaaagtgtatgacccacattgatttaacccaatgagagaatgagtgttaga 13407354  T
Q  215 gagagtgttgaaaagaaagtgtt 237  Q
    ||||||||| |||||| ||||||    
T  13407353 gagagtgttcaaaagagagtgtt 13407331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 20496227 - 20496145
Alignment:
Q  1 agagacaaataattacatacaagcacatataaacacacataaaaattaattaaaatagttctgacgaaaatcaggttgttaca 83  Q
    |||||||| |||| | | ||||||||| |||||||||||||| |||||||||||||| ||||  |||||||| ||| ||||||    
T  20496227 agagacaattaatcatacacaagcacaaataaacacacataataattaattaaaataattctagcgaaaatcgggtcgttaca 20496145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 25281821 - 25281875
Alignment:
Q  3 agacaaataattacatacaagcacatataaacacacataaaaattaattaaaata 57  Q
    |||||| |||| |||||||||||||||||||||||||||| || |||||||||||    
T  25281821 agacaattaatcacatacaagcacatataaacacacataataaataattaaaata 25281875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 97 - 191
Target Start/End: Original strand, 42473994 - 42474088
Alignment:
Q  97 ttcaacactcattctctcattggataaaaccaatgtatgacccaccaatttaagtggaatccatttccaaaatgtgagacccgccataatttaag 191  Q
    ||||||| ||||| | | |||||||||||  ||||| |||||||||| |||||||||||| ||||| |||| |||||||||| | || |||||||    
T  42473994 ttcaacattcatttttttattggataaaattaatgtttgacccaccactttaagtggaattcattttcaaagtgtgagacccactatgatttaag 42474088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 7 - 83
Target Start/End: Complemental strand, 23539725 - 23539649
Alignment:
Q  7 aaataattacatacaagcacatataaacacacataaaaattaattaaaatagttctgacgaaaatcaggttgttaca 83  Q
    ||||||| |||||||||| ||||||||||||||||| || ||||||||||| || |  |||||| | ||||||||||    
T  23539725 aaataatcacatacaagcgcatataaacacacataataaataattaaaataattatagcgaaaaacgggttgttaca 23539649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 115 - 237
Target Start/End: Complemental strand, 45218646 - 45218524
Alignment:
Q  115 attggataaaaccaatgtatgacccaccaatttaagtggaatccatttccaaaatgtgagacccgccataatttaagtcaattaaagaa-cgagtgttag 213  Q
    ||||||| ||| |||||  || ||||||| ||||||||||| ||||||||||||||||||  || || | ||||||  ||| |||||||  ||||||| |    
T  45218646 attggatgaaatcaatgcgtgtcccaccactttaagtggaacccatttccaaaatgtgaggaccaccttgatttaaaccaa-taaagaatagagtgtttg 45218548  T
Q  214 agagagtgttgaaaagaaagtgtt 237  Q
     |||||||||||||||| ||||||    
T  45218547 ggagagtgttgaaaagagagtgtt 45218524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 82 - 196
Target Start/End: Original strand, 14636071 - 14636185
Alignment:
Q  82 catggacactctctcttcaacactcattctctcattggataaaaccaatgtatgacccaccaatttaagtggaatccatttccaaaatgtgagacccgcc 181  Q
    |||||||||  ||| ||||||||||||| ||| ||||| | |||||| | |||||||||||| ||| | ||||| ||||||  ||| ||||||||||  |    
T  14636071 catggacaccttcttttcaacactcattttcttattgggtgaaaccattatatgacccaccattttgaatggaaaccatttttaaagtgtgagacccatc 14636170  T
Q  182 ataatttaagtcaat 196  Q
    || ||||||| ||||    
T  14636171 attatttaagccaat 14636185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 23543196 - 23543278
Alignment:
Q  3 agacaaataattacatacaagcacatataaacacacataaaaattaattaaaatagttctgacgaaaatcaggttgttacatg 85  Q
    |||||| |||| | ||| |||||||||||||||||||||| || ||||||||||| ||||  | |||| | ||||||||||||    
T  23543196 agacaattaatcatatataagcacatataaacacacataataaataattaaaataattctagcaaaaaacgggttgttacatg 23543278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 101 - 178
Target Start/End: Complemental strand, 16314418 - 16314341
Alignment:
Q  101 acactcattctctcattggataaaaccaatgtatgacccaccaatttaagtggaatccatttccaaaatgtgagaccc 178  Q
    ||||||| ||| | |||||||||||  ||||||||  |||||| ||||||| ||||||||||  ||||||||||||||    
T  16314418 acactcactcttttattggataaaattaatgtatgttccaccactttaagttgaatccatttttaaaatgtgagaccc 16314341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 115 - 196
Target Start/End: Complemental strand, 34366822 - 34366741
Alignment:
Q  115 attggataaaaccaatgtatgacccaccaatttaagtggaatccatttccaaaatgtgagacccgccataatttaagtcaat 196  Q
    ||||||| |||||| ||||||| |||||| ||| | || |||||||||| ||||| |||||||  |||| ||||||||||||    
T  34366822 attggatgaaaccattgtatgatccaccactttgaatgaaatccatttctaaaatatgagacctaccattatttaagtcaat 34366741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 92 - 133
Target Start/End: Original strand, 38091399 - 38091440
Alignment:
Q  92 ctctcttcaacactcattctctcattggataaaaccaatgta 133  Q
    ||||||| |||||||||||||| |||||||||||||||||||    
T  38091399 ctctcttgaacactcattctcttattggataaaaccaatgta 38091440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 83
Target Start/End: Original strand, 22982144 - 22982208
Alignment:
Q  19 acaagcacatataaacacacataaaaattaattaaaatagttctgacgaaaatcaggttgttaca 83  Q
    |||||||||||||||||||||  |||| |||||||||||  | | ||||||||| ||||||||||    
T  22982144 acaagcacatataaacacacaataaaagtaattaaaataaatataacgaaaatcgggttgttaca 22982208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 100 - 167
Target Start/End: Original strand, 6387597 - 6387664
Alignment:
Q  100 aacactcattctctcattggataaaaccaatgtatgacccaccaatttaagtggaatccatttccaaa 167  Q
    |||||||| ||| | ||||||||||| ||||||||| ||||||| |||| ||||  ||||||||||||    
T  6387597 aacactcactcttttattggataaaatcaatgtatgtcccaccattttatgtgggttccatttccaaa 6387664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 100 - 143
Target Start/End: Original strand, 8914807 - 8914850
Alignment:
Q  100 aacactcattctctcattggataaaaccaatgtatgacccacca 143  Q
    |||||||| ||| ||||||||||||||||||||||| |||||||    
T  8914807 aacactcactctttcattggataaaaccaatgtatgtcccacca 8914850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 88 - 228
Target Start/End: Original strand, 29011079 - 29011217
Alignment:
Q  88 cactctctcttcaacactcattctctcattggataaaaccaatgtatgacccaccaatttaagtggaatccatttccaaaatgtgagacccgccataatt 187  Q
    ||||||||||  |||||||||||||| | ||||| |||| |||||||| || |||| ||| | ||||| ||||||||||| |||| ||| | ||   |||    
T  29011079 cactctctct--aacactcattctcttaatggatgaaactaatgtatgtcctaccactttgaatggaacccatttccaaagtgtgtgactcacctcgatt 29011176  T
Q  188 taagtcaattaaagaa-cgagtgttagagagagtgttgaaaa 228  Q
    |||  ||| |||||||  ||||||| ||||||||||||||||    
T  29011177 taaaccaa-taaagaagtgagtgtttgagagagtgttgaaaa 29011217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 145 - 178
Target Start/End: Complemental strand, 15905405 - 15905372
Alignment:
Q  145 tttaagtggaatccatttccaaaatgtgagaccc 178  Q
    |||||||||||||||||| |||||||||||||||    
T  15905405 tttaagtggaatccattttcaaaatgtgagaccc 15905372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 89 - 141
Target Start/End: Complemental strand, 6891623 - 6891571
Alignment:
Q  89 actctctcttcaacactcattctctcattggataaaaccaatgtatgacccac 141  Q
    |||||||||| |||| || |||||| ||||||||||| |||||||| ||||||    
T  6891623 actctctctttaacattcgttctcttattggataaaaacaatgtataacccac 6891571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 70; Significance: 2e-31; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 92 - 237
Target Start/End: Complemental strand, 19193655 - 19193510
Alignment:
Q  92 ctctcttcaacactcattctctcattggataaaaccaatgtatgacccaccaatttaagtggaatccatttccaaaatgtgagacccgccataatttaag 191  Q
    ||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||||| || | ||||||||| | |||||||| |||| ||||||     
T  19193655 ctctcttgaacactcattctcttattggataaaaccaatgtatgacccaccactttaagtgaaacctatttccaaagtatgagacccaccatgatttaaa 19193556  T
Q  192 tcaattaaagaacgagtgttagagagagtgttgaaaagaaagtgtt 237  Q
      ||||| | |  ||||||| |||||||||||||||||| ||||||    
T  19193555 ctaattagaaagtgagtgttggagagagtgttgaaaagagagtgtt 19193510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 92 - 200
Target Start/End: Complemental strand, 42669882 - 42669774
Alignment:
Q  92 ctctcttcaacactcattctctcattggataaaaccaatgtatgacccaccaatttaagtggaatccatttccaaaatgtgagacccgccataatttaag 191  Q
    |||||||||||||||||| ||| |||||||| || ||||||||||||||||| |||||||| || ||||||||||| ||||| |||| |||| |||||||    
T  42669882 ctctcttcaacactcattttcttattggatagaatcaatgtatgacccaccactttaagtgaaacccatttccaaagtgtgaaacccaccatgatttaag 42669783  T
Q  192 tcaattaaa 200  Q
     ||||||||    
T  42669782 ccaattaaa 42669774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 93 - 176
Target Start/End: Original strand, 19953424 - 19953507
Alignment:
Q  93 tctcttcaacactcattctctcattggataaaaccaatgtatgacccaccaatttaagtggaatccatttccaaaatgtgagac 176  Q
    ||||||||||||||||||| | ||||||| ||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||    
T  19953424 tctcttcaacactcattcttttattggatgaaaccaatgtatgacccaccactttaagtggaacccatttccaaagtgtgagac 19953507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 115 - 253
Target Start/End: Complemental strand, 18949324 - 18949186
Alignment:
Q  115 attggataaaaccaatgtatgacccaccaatttaagtggaatccatttccaaaatgtgagacccgccataatttaagtcaattaaagaacgagtgttaga 214  Q
    |||||||||||||||||||||| ||| || ||||||||||| ||||||  ||| |||||||||| |||| ||||||| |||||| | |  ||||||| ||    
T  18949324 attggataaaaccaatgtatgatccatcactttaagtggaacccatttttaaagtgtgagacccaccatgatttaagccaattagaaattgagtgttgga 18949225  T
Q  215 gagagtgttgaaaagaaagtgttcatatcatttctcaaa 253  Q
    || ||||||||||||| ||||||| || || ||||||||    
T  18949224 gaaagtgttgaaaagagagtgttcctagcacttctcaaa 18949186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 92 - 237
Target Start/End: Complemental strand, 6420605 - 6420462
Alignment:
Q  92 ctctcttcaacactcattctctcattggataaaaccaatgtatgacccaccaatttaagtggaatccatttccaaaatgtgagacccgccataatttaag 191  Q
    |||| ||||||||||||| | | ||||| | |||  |||||||||||||||| |||||||| || | ||||||  |||||||||||| |||| |||||||    
T  6420605 ctcttttcaacactcatttttttattgggtgaaattaatgtatgacccaccattttaagtgaaacctatttcc--aatgtgagacccaccatgatttaag 6420508  T
Q  192 tcaattaaagaacgagtgttagagagagtgttgaaaagaaagtgtt 237  Q
     |||| | | |  ||||| | |||||||||||||||||| ||||||    
T  6420507 ccaataagaaagtgagtggtggagagagtgttgaaaagagagtgtt 6420462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 18996005 - 18996061
Alignment:
Q  1 agagacaaataattacatacaagcacatataaacacacataaaaattaattaaaata 57  Q
    ||||||||||||| | ||||||||||| |||||||||||||| ||||||||||||||    
T  18996005 agagacaaataatcatatacaagcacaaataaacacacataataattaattaaaata 18996061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 85 - 175
Target Start/End: Complemental strand, 385140 - 385050
Alignment:
Q  85 ggacactctctcttcaacactcattctctcattggataaaaccaatgtatgacccaccaatttaagtggaatccatttccaaaatgtgaga 175  Q
    ||||||||| | ||||||||||| ||||| ||||||| |||| | |||||| |||||||  ||||||||||||||||| |||  |||||||    
T  385140 ggacactctattttcaacactcactctcttattggatgaaactagtgtatgtcccaccaccttaagtggaatccattttcaatgtgtgaga 385050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 100 - 237
Target Start/End: Original strand, 31494242 - 31494379
Alignment:
Q  100 aacactcattctctcattggataaaaccaatgtatgacccaccaatttaagtggaatccatttccaaaatgtgagacccgccataatttaagtcaattaa 199  Q
    |||||||| ||||| ||||||| |||  |||||||| ||||| | ||||||||||| ||||||||||  |||||||||| || | ||||||| ||| |||    
T  31494242 aacactcactctcttattggatgaaaataatgtatgtcccactactttaagtggaacccatttccaatgtgtgagacccaccttgatttaagccaa-taa 31494340  T
Q  200 agaa-cgagtgttagagagagtgttgaaaagaaagtgtt 237  Q
     |||  |||||||   |||||||||||||||| ||||||    
T  31494341 tgaagtgagtgtttaggagagtgttgaaaagagagtgtt 31494379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 92 - 152
Target Start/End: Complemental strand, 8163612 - 8163552
Alignment:
Q  92 ctctcttcaacactcattctctcattggataaaaccaatgtatgacccaccaatttaagtg 152  Q
    |||| ||||||||||||| | | ||||||||||| ||||||||||||||||| ||||||||    
T  8163612 ctcttttcaacactcatttttttattggataaaatcaatgtatgacccaccactttaagtg 8163552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 130 - 190
Target Start/End: Original strand, 37078026 - 37078086
Alignment:
Q  130 tgtatgacccaccaatttaagtggaatccatttccaaaatgtgagacccgccataatttaa 190  Q
    |||||| ||||||| ||||||||||||||||||||||  |||||||||| || ||||||||    
T  37078026 tgtatgtcccaccactttaagtggaatccatttccaatgtgtgagacccaccttaatttaa 37078086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 92 - 167
Target Start/End: Original strand, 20458939 - 20459014
Alignment:
Q  92 ctctcttcaacactcattctctcattggataaaaccaatgtatgacccaccaatttaagtggaatccatttccaaa 167  Q
    ||||||| |||||||||||||| ||||||| |||||| ||| |||| ||||| ||| ||||||| |||||| ||||    
T  20458939 ctctcttaaacactcattctcttattggatgaaaccattgtttgactcaccactttgagtggaacccattttcaaa 20459014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 198
Target Start/End: Original strand, 4024759 - 4024823
Alignment:
Q  134 tgacccaccaatttaagtggaatccatttccaaaatgtgagacccgccataatttaagtcaatta 198  Q
    |||||||| | ||||||||||| |||||| |||| |||||||||| |||| ||||||| ||||||    
T  4024759 tgacccacaactttaagtggaacccattttcaaagtgtgagacccaccatgatttaagccaatta 4024823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 20511079 - 20511139
Alignment:
Q  2 gagacaaataattacatacaagcacatataaacacacataaaaattaattaaaatagttct 62  Q
    ||||||| |||| |||||||| |||||||||||| |||||| || ||||||||||| ||||    
T  20511079 gagacaattaatcacatacaaacacatataaacatacataataaataattaaaataattct 20511139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 192 - 238
Target Start/End: Original strand, 17505934 - 17505980
Alignment:
Q  192 tcaattaaagaacgagtgttagagagagtgttgaaaagaaagtgttc 238  Q
    ||||||| |||| ||||||| |||||||||||||||||| |||||||    
T  17505934 tcaattagagaatgagtgtttgagagagtgttgaaaagatagtgttc 17505980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 45572864 - 45572795
Alignment:
Q  1 agagacaaataattacatacaagcacatataaacacacataaaaattaattaaaatagttctgacgaaaat 71  Q
    |||| ||| |||| |||||| |||||||||||||||| || ||||||||||||||||  ||| ||||||||    
T  45572864 agaggcaattaatcacatacgagcacatataaacacatat-aaaattaattaaaataaatctaacgaaaat 45572795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 45576531 - 45576462
Alignment:
Q  1 agagacaaataattacatacaagcacatataaacacacataaaaattaattaaaatagttctgacgaaaat 71  Q
    |||| ||| |||| |||||| |||||||||||||||| || ||||||||||||||||  ||| ||||||||    
T  45576531 agaggcaattaatcacatacgagcacatataaacacatat-aaaattaattaaaataaatctaacgaaaat 45576462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 45580198 - 45580129
Alignment:
Q  1 agagacaaataattacatacaagcacatataaacacacataaaaattaattaaaatagttctgacgaaaat 71  Q
    |||| ||| |||| |||||| |||||||||||||||| || ||||||||||||||||  ||| ||||||||    
T  45580198 agaggcaattaatcacatacgagcacatataaacacatat-aaaattaattaaaataaatctaacgaaaat 45580129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 45583865 - 45583796
Alignment:
Q  1 agagacaaataattacatacaagcacatataaacacacataaaaattaattaaaatagttctgacgaaaat 71  Q
    |||| ||| |||| |||||| |||||||||||||||| || ||||||||||||||||  ||| ||||||||    
T  45583865 agaggcaattaatcacatacgagcacatataaacacatat-aaaattaattaaaataaatctaacgaaaat 45583796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 45587532 - 45587463
Alignment:
Q  1 agagacaaataattacatacaagcacatataaacacacataaaaattaattaaaatagttctgacgaaaat 71  Q
    |||| ||| |||| |||||| |||||||||||||||| || ||||||||||||||||  ||| ||||||||    
T  45587532 agaggcaattaatcacatacgagcacatataaacacatat-aaaattaattaaaataaatctaacgaaaat 45587463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 45591199 - 45591130
Alignment:
Q  1 agagacaaataattacatacaagcacatataaacacacataaaaattaattaaaatagttctgacgaaaat 71  Q
    |||| ||| |||| |||||| |||||||||||||||| || ||||||||||||||||  ||| ||||||||    
T  45591199 agaggcaattaatcacatacgagcacatataaacacatat-aaaattaattaaaataaatctaacgaaaat 45591130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 45594866 - 45594797
Alignment:
Q  1 agagacaaataattacatacaagcacatataaacacacataaaaattaattaaaatagttctgacgaaaat 71  Q
    |||| ||| |||| |||||| |||||||||||||||| || ||||||||||||||||  ||| ||||||||    
T  45594866 agaggcaattaatcacatacgagcacatataaacacatat-aaaattaattaaaataaatctaacgaaaat 45594797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 45598533 - 45598464
Alignment:
Q  1 agagacaaataattacatacaagcacatataaacacacataaaaattaattaaaatagttctgacgaaaat 71  Q
    |||| ||| |||| |||||| |||||||||||||||| || ||||||||||||||||  ||| ||||||||    
T  45598533 agaggcaattaatcacatacgagcacatataaacacatat-aaaattaattaaaataaatctaacgaaaat 45598464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 45602200 - 45602131
Alignment:
Q  1 agagacaaataattacatacaagcacatataaacacacataaaaattaattaaaatagttctgacgaaaat 71  Q
    |||| ||| |||| |||||| |||||||||||||||| || ||||||||||||||||  ||| ||||||||    
T  45602200 agaggcaattaatcacatacgagcacatataaacacatat-aaaattaattaaaataaatctaacgaaaat 45602131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 45605867 - 45605798
Alignment:
Q  1 agagacaaataattacatacaagcacatataaacacacataaaaattaattaaaatagttctgacgaaaat 71  Q
    |||| ||| |||| |||||| |||||||||||||||| || ||||||||||||||||  ||| ||||||||    
T  45605867 agaggcaattaatcacatacgagcacatataaacacatat-aaaattaattaaaataaatctaacgaaaat 45605798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 45609534 - 45609465
Alignment:
Q  1 agagacaaataattacatacaagcacatataaacacacataaaaattaattaaaatagttctgacgaaaat 71  Q
    |||| ||| |||| |||||| |||||||||||||||| || ||||||||||||||||  ||| ||||||||    
T  45609534 agaggcaattaatcacatacgagcacatataaacacatat-aaaattaattaaaataaatctaacgaaaat 45609465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 45613201 - 45613132
Alignment:
Q  1 agagacaaataattacatacaagcacatataaacacacataaaaattaattaaaatagttctgacgaaaat 71  Q
    |||| ||| |||| |||||| |||||||||||||||| || ||||||||||||||||  ||| ||||||||    
T  45613201 agaggcaattaatcacatacgagcacatataaacacatat-aaaattaattaaaataaatctaacgaaaat 45613132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 45616868 - 45616799
Alignment:
Q  1 agagacaaataattacatacaagcacatataaacacacataaaaattaattaaaatagttctgacgaaaat 71  Q
    |||| ||| |||| |||||| |||||||||||||||| || ||||||||||||||||  ||| ||||||||    
T  45616868 agaggcaattaatcacatacgagcacatataaacacatat-aaaattaattaaaataaatctaacgaaaat 45616799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 23836095 - 23836046
Alignment:
Q  8 aataattacatacaagcacatataaacacacataaaaattaattaaaata 57  Q
    |||||| ||| |||||||||||||||||||||  |||| |||||||||||    
T  23836095 aataatcacacacaagcacatataaacacacaataaaagtaattaaaata 23836046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 254
Target Start/End: Complemental strand, 43400175 - 43400126
Alignment:
Q  205 gagtgttagagagagtgttgaaaagaaagtgttcatatcatttctcaaaa 254  Q
    |||||||||||||||||||||||||| ||| | |||| |||| |||||||    
T  43400175 gagtgttagagagagtgttgaaaagagagtatccatagcattactcaaaa 43400126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 9682776 - 9682820
Alignment:
Q  192 tcaattaaagaacgagtgttagagagagtgttgaaaagaaagtgt 236  Q
    ||||| ||||||||| ||||||||||| | |||||||||||||||    
T  9682776 tcaataaaagaacgaatgttagagagattattgaaaagaaagtgt 9682820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 119 - 175
Target Start/End: Original strand, 10681233 - 10681289
Alignment:
Q  119 gataaaaccaatgtatgacccaccaatttaagtggaatccatttccaaaatgtgaga 175  Q
    |||||||  |||| |||| |||||| |||||||||||| ||||| ||||||||||||    
T  10681233 gataaaattaatgcatgatccaccattttaagtggaattcatttgcaaaatgtgaga 10681289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 83
Target Start/End: Original strand, 28775001 - 28775080
Alignment:
Q  3 agacaaataattacatacaagcacatataaacacacataaaaattaattaaaatagttctgacgaaaatcaggttgttaca 83  Q
    ||||||||||| | |||||| ||||||||| ||||| ||| || ||||||||||| ||||  |||||| | ||||||||||    
T  28775001 agacaaataatcatatacaaacacatataatcacacgtaataaataattaaaata-ttctagcgaaaaacgggttgttaca 28775080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 185 - 237
Target Start/End: Complemental strand, 42579716 - 42579664
Alignment:
Q  185 atttaagtcaattaaagaacgagtgttagagagagtgttgaaaagaaagtgtt 237  Q
    |||||||||||||| |||  |||| ||||| |||||||| |||||||||||||    
T  42579716 atttaagtcaattagagagtgagttttagaaagagtgtttaaaagaaagtgtt 42579664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 66; Significance: 5e-29; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 85 - 246
Target Start/End: Complemental strand, 25002165 - 25002004
Alignment:
Q  85 ggacactctctcttcaacactcattctctcattggataaaaccaatgtatgacccaccaatttaagtggaatccatttccaaaatgtgagacccgccata 184  Q
    ||||||||||| ||||||||||| | ||| ||||| | |||||||||| |||||||||| ||||||||||  ||||||||||| |||||||||| | ||     
T  25002165 ggacactctcttttcaacactcactttctaattggcttaaaccaatgtgtgacccaccactttaagtggagcccatttccaaagtgtgagacccactatg 25002066  T
Q  185 atttaagtcaattaaagaacgagtgttagagagagtgttgaaaagaaagtgttcatatcatt 246  Q
    ||||||  |||||| | |  ||||||| |||||||||||||||||| ||||| | |||||||    
T  25002065 atttaaaccaattagaaagtgagtgttggagagagtgttgaaaagagagtgtccctatcatt 25002004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 88 - 230
Target Start/End: Original strand, 36325462 - 36325603
Alignment:
Q  88 cactctctcttcaacactcattctctcattggataaaaccaatgtatgacccaccaatttaagtggaatccatttccaaaatgtgagacccgccataatt 187  Q
    |||| ||| ||||||||||| | ||| ||||| | |||||||||| |||||||||| ||||||||||| ||||||  ||| ||| |||||| |||| |||    
T  36325462 cactatcttttcaacactcactttctaattggcttaaaccaatgtgtgacccaccactttaagtggaacccattt-taaagtgtaagacccaccatgatt 36325560  T
Q  188 taagtcaattaaagaacgagtgttagagagagtgttgaaaaga 230  Q
    |||| |||||||| |  ||||||| |||||| |||||||||||    
T  36325561 taagccaattaaaaagtgagtgttggagagaatgttgaaaaga 36325603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 85 - 200
Target Start/End: Complemental strand, 23260331 - 23260216
Alignment:
Q  85 ggacactctctcttcaacactcattctctcattggataaaaccaatgtatgacccaccaatttaagtggaatccatttccaaaatgtgagacccgccata 184  Q
    ||||||| ||| ||||||||||  | | | ||||| | |||||||||| |||||||||| ||||||||||||||||||| ||| |||||||| | | ||     
T  23260331 ggacactttcttttcaacactcgctttttaattggcttaaaccaatgtgtgacccaccattttaagtggaatccatttctaaagtgtgagacacactatg 23260232  T
Q  185 atttaagtcaattaaa 200  Q
    ||||||||||||||||    
T  23260231 atttaagtcaattaaa 23260216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 139 - 237
Target Start/End: Complemental strand, 41034535 - 41034437
Alignment:
Q  139 caccaatttaagtggaatccatttccaaaatgtgagacccgccataatttaagtcaattaaagaacgagtgttagagagagtgttgaaaagaaagtgtt 237  Q
    ||||| ||||||||||| ||||||||||| |||||||||| |||| ||||||| |||||| | |  ||||||| || ||||||||||||||| ||||||    
T  41034535 caccattttaagtggaacccatttccaaagtgtgagacccaccatgatttaagccaattagaaagtgagtgttggatagagtgttgaaaagagagtgtt 41034437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 106 - 237
Target Start/End: Complemental strand, 6530012 - 6529881
Alignment:
Q  106 cattctctcattggataaaaccaatgtatgacccaccaatttaagtggaatccatttccaaaatgtgagacccgccataatttaagtcaattaaagaacg 205  Q
    |||||||| ||||||| |||| |||||||| ||||||| ||| ||||||| ||||||| ||  |||||||| | || ||||||||| |||  | | | ||    
T  6530012 cattctcttattggatgaaactaatgtatgtcccaccatttttagtggaacccatttctaatgtgtgagactcaccttaatttaagccaaaaataaagcg 6529913  T
Q  206 agtgttagagagagtgttgaaaagaaagtgtt 237  Q
    |||||| |||| ||||||||||||| ||||||    
T  6529912 agtgtttgagaaagtgttgaaaagagagtgtt 6529881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 92 - 167
Target Start/End: Original strand, 10299913 - 10299988
Alignment:
Q  92 ctctcttcaacactcattctctcattggataaaaccaatgtatgacccaccaatttaagtggaatccatttccaaa 167  Q
    |||||||||||||||||||||| ||||||| || |||||| ||||||||||| ||| ||||| | |||||||||||    
T  10299913 ctctcttcaacactcattctcttattggatgaacccaatgcatgacccaccacttttagtgggacccatttccaaa 10299988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 86 - 190
Target Start/End: Original strand, 7585008 - 7585112
Alignment:
Q  86 gacactctctcttcaacactcattctctcattggataaaaccaatgtatgacccaccaatttaagtggaatccatttccaaaatgtgagacccgccataa 185  Q
    |||||||||| ||||||||||||||||| ||||||| |||| | |||||| || | || |||||||| || ||||||||||  |||||||| | || |||    
T  7585008 gacactctcttttcaacactcattctcttattggatgaaactagtgtatgtcctatcactttaagtgaaacccatttccaatgtgtgagactcaccttaa 7585107  T
Q  186 tttaa 190  Q
    |||||    
T  7585108 tttaa 7585112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 19315774 - 19315718
Alignment:
Q  1 agagacaaataattacatacaagcacatataaacacacataaaaattaattaaaata 57  Q
    ||||||||||||| ||||||||||||||||||||||||||||  | |||||||||||    
T  19315774 agagacaaataatcacatacaagcacatataaacacacataatgaataattaaaata 19315718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 24516775 - 24516831
Alignment:
Q  1 agagacaaataattacatacaagcacatataaacacacataaaaattaattaaaata 57  Q
    |||||||| |||| |||||||||||||||||||| ||||||| ||||||||||||||    
T  24516775 agagacaattaatcacatacaagcacatataaacgcacataataattaattaaaata 24516831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 22827005 - 22826944
Alignment:
Q  1 agagacaaataattacatacaagcacatataaacacacataaaaattaattaaaatagttct 62  Q
    |||||| |||||| ||||||||| ||||||| |||||||||| |||||||||||||| ||||    
T  22827005 agagacgaataatcacatacaagaacatatagacacacataataattaattaaaataattct 22826944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 17170336 - 17170392
Alignment:
Q  1 agagacaaataattacatacaagcacatataaacacacataaaaattaattaaaata 57  Q
    |||||||| |||| |||||||||| ||||||||||||||||| || |||||||||||    
T  17170336 agagacaattaatcacatacaagcgcatataaacacacataataaataattaaaata 17170392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 83
Target Start/End: Original strand, 22446795 - 22446875
Alignment:
Q  3 agacaaataattacatacaagcacatataaacacacataaaaattaattaaaatagttctgacgaaaatcaggttgttaca 83  Q
    ||||||| ||| |||||||  ||||||||||||||||||| |||||| ||||||| ||||  |||||||| || |||||||    
T  22446795 agacaaacaatcacatacacacacatataaacacacataataattaaataaaataattctagcgaaaatcgggctgttaca 22446875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 71
Target Start/End: Complemental strand, 18223429 - 18223374
Alignment:
Q  16 catacaagcacatataaacacacataaaaattaattaaaatagttctgacgaaaat 71  Q
    ||||||||||||||||||||||||||| || ||||||||||| ||||  |||||||    
T  18223429 catacaagcacatataaacacacataataaataattaaaataattctagcgaaaat 18223374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 95 - 189
Target Start/End: Complemental strand, 43461517 - 43461423
Alignment:
Q  95 tcttcaacactcattctctcattggataaaaccaatgtatgacccaccaatttaagtggaatccatttccaaaatgtgagacccgccataattta 189  Q
    |||| |||| ||||||| ||||||||| ||  |||||||||||||| || ||| ||||||| |||| | |||| |||||||||| |||| |||||    
T  43461517 tcttgaacattcattctgtcattggatgaatgcaatgtatgacccatcacttttagtggaacccatattcaaagtgtgagacccaccatgattta 43461423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 100 - 183
Target Start/End: Complemental strand, 6645219 - 6645136
Alignment:
Q  100 aacactcattctctcattggataaaaccaatgtatgacccaccaatttaagtggaatccatttccaaaatgtgagacccgccat 183  Q
    |||||||||||| ||||||||| ||   |||||||||||||||| ||| ||||||   | |||||||| |||||||||| ||||    
T  6645219 aacactcattctttcattggatgaatgtaatgtatgacccaccatttttagtggagctcgtttccaaagtgtgagacccaccat 6645136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 72
Target Start/End: Original strand, 31480307 - 31480373
Alignment:
Q  5 acaaataattacatacaagcacatataaacacacataaaaattaattaaaatagttctgacgaaaatc 72  Q
    ||||||||| | ||||||||||||||||||||||||||  | ||||||||||| ||||  ||||||||    
T  31480307 acaaataatcatatacaagcacatataaacacacataatga-taattaaaataattctagcgaaaatc 31480373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 130 - 196
Target Start/End: Original strand, 5630560 - 5630626
Alignment:
Q  130 tgtatgacccaccaatttaagtggaatccatttccaaaatgtgagacccgccataatttaagtcaat 196  Q
    |||||||||||||| ||| | || ||||||||| |||| | |||||||| |||||||||||| ||||    
T  5630560 tgtatgacccaccattttgaatgaaatccattttcaaagtatgagacccaccataatttaagccaat 5630626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 183 - 237
Target Start/End: Original strand, 32401236 - 32401290
Alignment:
Q  183 taatttaagtcaattaaagaacgagtgttagagagagtgttgaaaagaaagtgtt 237  Q
    ||||||||||||| ||||||  |||| |||||||||||||| ||||||| |||||    
T  32401236 taatttaagtcaactaaagagtgagtattagagagagtgttcaaaagaaggtgtt 32401290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 19858821 - 19858752
Alignment:
Q  1 agagacaaataattacatacaagcacatataaacacacataaaaattaattaaaatagttctgacgaaaa 70  Q
    ||||||||||||| ||| |||||  ||||||| ||||||||| || |||||| |||| |||| |||||||    
T  19858821 agagacaaataatcacacacaagagcatataaccacacataataaataattagaataattctaacgaaaa 19858752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 253
Target Start/End: Complemental strand, 17190649 - 17190601
Alignment:
Q  205 gagtgttagagagagtgttgaaaagaaagtgttcatatcatttctcaaa 253  Q
    ||||||||||||||||| |  ||||| |||||||||| |||||||||||    
T  17190649 gagtgttagagagagtgctagaaagagagtgttcatagcatttctcaaa 17190601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 66; Significance: 5e-29; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 115 - 237
Target Start/End: Complemental strand, 40125968 - 40125850
Alignment:
Q  115 attggataaaaccaatgtatgacccaccaatttaagtggaatccatttccaaaatgtgagacccgccataatttaagtcaattaaagaacgagtgttaga 214  Q
    |||||||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||    ||||||||||||||||||| | |  || |||| ||    
T  40125968 attggataaaactaatgtatgacccaccactttaagtggaatccatttccaaagtgtgaga----ccataatttaagtcaattagaaagtgaatgttgga 40125873  T
Q  215 gagagtgttgaaaagaaagtgtt 237  Q
    |||||||||||||||||| ||||    
T  40125872 gagagtgttgaaaagaaattgtt 40125850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 92 - 236
Target Start/End: Original strand, 18473677 - 18473821
Alignment:
Q  92 ctctcttcaacactcattctctcattggataaaaccaatgtatgacccaccaatttaagtggaatccatttccaaaatgtgagacccgccataatttaag 191  Q
    |||||||||||||||| | ||| ||||  | |||||||| | |||||| ||| ||||||||||| |||||| |||| |||||||||| |||| |||||||    
T  18473677 ctctcttcaacactcactttctaattgacttaaaccaatatgtgacccgccactttaagtggaacccattttcaaagtgtgagacccaccatgatttaag 18473776  T
Q  192 tcaattaaagaacgagtgttagagagagtgttgaaaagaaagtgt 236  Q
     |||||| | |  |||||||  ||||||||||||||||| |||||    
T  18473777 ccaattagaaagtgagtgttgaagagagtgttgaaaagagagtgt 18473821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 2 - 84
Target Start/End: Original strand, 21981571 - 21981653
Alignment:
Q  2 gagacaaataattacatacaagcacatataaacacacataaaaattaattaaaatagttctgacgaaaatcaggttgttacat 84  Q
    |||||||||||| |||||||||||||||| ||||||||||| |||||||||||||| |||| || |||||  |||||||||||    
T  21981571 gagacaaataatcacatacaagcacatatgaacacacataataattaattaaaataattctaacaaaaattgggttgttacat 21981653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 87 - 191
Target Start/End: Complemental strand, 15741965 - 15741861
Alignment:
Q  87 acactctctcttcaacactcattctctcattggataaaaccaatgtatgacccaccaatttaagtggaatccatttccaaaatgtgagacccgccataat 186  Q
    ||||||||| |||||||||||||  || |||||||||||||||||||||| | | || |||||||| ||  |||||||||| |||||||||||| || ||    
T  15741965 acactctcttttcaacactcattaacttattggataaaaccaatgtatgatcgatcactttaagtgaaactcatttccaaagtgtgagacccgctatgat 15741866  T
Q  187 ttaag 191  Q
    |||||    
T  15741865 ttaag 15741861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 123 - 211
Target Start/End: Original strand, 11247829 - 11247917
Alignment:
Q  123 aaaccaatgtatgacccaccaatttaagtggaatccatttccaaaatgtgagacccgccataatttaagtcaattaaagaacgagtgtt 211  Q
    |||||||||| ||| |||||| ||||||||||| |||||| |||| |||||||||| |||| ||||||| |||||||| || |||||||    
T  11247829 aaaccaatgtgtgatccaccattttaagtggaacccattttcaaagtgtgagacccaccatgatttaagccaattaaaaaatgagtgtt 11247917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 21424036 - 21424104
Alignment:
Q  4 gacaaataattacatacaagcacatataaacacacataaaaattaattaaaatagttctgacgaaaatc 72  Q
    |||| ||||| |||||||||||||||||||||||||||| |||||||||||||| ||||  ||||||||    
T  21424036 gacagataatcacatacaagcacatataaacacacataataattaattaaaataattctagcgaaaatc 21424104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 96 - 224
Target Start/End: Original strand, 25010025 - 25010152
Alignment:
Q  96 cttcaacactcattctctcattggataaaaccaatgtatgacccaccaatttaagtggaatccatttccaaaatgtgagacccgccataatttaagtcaa 195  Q
    |||||||||||||||||| ||||||| |||||| ||||| ||| || | ||| | ||||| ||||||| ||| ||||||| || | |||||||||| |||    
T  25010025 cttcaacactcattctcttattggatgaaaccattgtattacctactattttgaatggaacccatttctaaagtgtgaga-ccactataatttaagccaa 25010123  T
Q  196 ttaaagaacgagtgttagagagagtgttg 224  Q
    | ||| || ||||||| ||||||||||||    
T  25010124 taaaaaaatgagtgttggagagagtgttg 25010152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 115 - 200
Target Start/End: Original strand, 7549636 - 7549722
Alignment:
Q  115 attggataaaaccaatgtatgacccaccaatttaagtggaatcca-tttccaaaatgtgagacccgccataatttaagtcaattaaa 200  Q
    |||||||||||| ||||||||||| |||| |||||||||||  || |||||||| |||||||| | |||||||||||| ||||||||    
T  7549636 attggataaaactaatgtatgaccaaccactttaagtggaacacattttccaaagtgtgagactcaccataatttaagccaattaaa 7549722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 120 - 200
Target Start/End: Original strand, 33234462 - 33234542
Alignment:
Q  120 ataaaaccaatgtatgacccaccaatttaagtggaatccatttccaaaatgtgagacccgccataatttaagtcaattaaa 200  Q
    ||||||| |||||||||| ||||| |||||||| || ||||||| ||| ||||||| || |||||||||||| ||||||||    
T  33234462 ataaaacaaatgtatgactcaccactttaagtgaaacccatttctaaagtgtgagatccaccataatttaagccaattaaa 33234542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 87 - 175
Target Start/End: Complemental strand, 14341076 - 14340990
Alignment:
Q  87 acactctctcttcaacactcattctctcattggataaaaccaatgtatgacccaccaatttaagtggaatccatttccaaaatgtgaga 175  Q
    |||||||||||  |||||||||| | | ||||||| |||| ||| |||| ||||||| ||||||||||| |||||||||| ||||||||    
T  14341076 acactctctct--aacactcatttttttattggatgaaactaatatatgtcccaccactttaagtggaacccatttccaatatgtgaga 14340990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 23475256 - 23475195
Alignment:
Q  1 agagacaaataattacatacaagcacatataaacacacataaaaattaattaaaatagttct 62  Q
    |||||||| |||| |||||||||||||||||| ||||||||| || ||||||||||| ||||    
T  23475256 agagacaattaatcacatacaagcacatataatcacacataataaataattaaaataattct 23475195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 95 - 191
Target Start/End: Complemental strand, 18953313 - 18953218
Alignment:
Q  95 tcttcaacactcattctctcattggataaaaccaatgtatgacccaccaatttaagtggaatccatttccaaaatgtgagacccgccataatttaag 191  Q
    ||||||||||||||| | | ||||||| |||||||||||||| ||||| |||| ||||||| || |||| ||| ||||||| || |||| |||||||    
T  18953313 tcttcaacactcatttttttattggatgaaaccaatgtatgatccacc-attttagtggaacccgtttctaaagtgtgagatccaccatgatttaag 18953218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 91 - 178
Target Start/End: Complemental strand, 21970431 - 21970344
Alignment:
Q  91 tctctcttcaacactcattctctcattggataaaaccaatgtatgacccaccaatttaagtggaatccatttccaaaatgtgagaccc 178  Q
    ||||| ||||||||||| ||||| |||| || |||| | |||||| ||||||| ||||||||||| |||||| |||  ||||||||||    
T  21970431 tctcttttcaacactcactctcttattgaatgaaactagtgtatgtcccaccactttaagtggaacccattttcaatgtgtgagaccc 21970344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 130 - 196
Target Start/End: Original strand, 2592970 - 2593036
Alignment:
Q  130 tgtatgacccaccaatttaagtggaatccatttccaaaatgtgagacccgccataatttaagtcaat 196  Q
    |||||||| ||||| ||||||||||||||||||  ||| |||||||||| || | ||||||||||||    
T  2592970 tgtatgactcaccactttaagtggaatccatttttaaagtgtgagacccacctttatttaagtcaat 2593036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 18621294 - 18621240
Alignment:
Q  1 agagacaaataattacatacaagcacatataaacacacataaaaattaattaaaa 55  Q
    |||||||| |||| |||||||||||||||||||||||||||| || |||| ||||    
T  18621294 agagacaattaatcacatacaagcacatataaacacacataataaataataaaaa 18621240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 19507723 - 19507789
Alignment:
Q  17 atacaagcacatataaacacacataaaaattaattaaaatagttctgacgaaaatcaggttgttaca 83  Q
    ||||||||||  ||||||||| |||| ||||||||||||||  ||| |||||||||||| |||||||    
T  19507723 atacaagcacgaataaacacatataagaattaattaaaataaatctaacgaaaatcaggctgttaca 19507789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 84
Target Start/End: Original strand, 21979353 - 21979435
Alignment:
Q  2 gagacaaataattacatacaagcacatataaacacacataaaaattaattaaaatagttctgacgaaaatcaggttgttacat 84  Q
    |||||||||||| |||||||||||||||| ||  ||||| | | ||| |||||||| |||| || |||||| |||||||||||    
T  21979353 gagacaaataatcacatacaagcacatatgaaagcacatcatatttagttaaaataattctaacaaaaatcgggttgttacat 21979435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 81
Target Start/End: Complemental strand, 49996678 - 49996617
Alignment:
Q  19 acaagcacatataaacacacataaaaattaattaaaatagttctgacgaaaatcaggttgtta 81  Q
    ||||||||||| ||||||| || |||| ||||||||||| |||| ||||||||||||||||||    
T  49996678 acaagcacata-aaacacatattaaaaataattaaaataattctaacgaaaatcaggttgtta 49996617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 21721008 - 21721061
Alignment:
Q  1 agagacaaataattacatacaagcacatataaacacacataaaaattaattaaa 54  Q
    |||||||| |||| |||||| ||||||||||||||||||||| || ||||||||    
T  21721008 agagacaattaatcacatacgagcacatataaacacacataataaataattaaa 21721061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 171
Target Start/End: Complemental strand, 13114828 - 13114743
Alignment:
Q  84 tggacactctctcttcaacactcattctctcattggataaaaccaatgtatgacccaccaatttaagtggaatccatttccaaaatgt 171  Q
    ||||||||||||||  |||||||| ||| | ||| ||||||| |||| |||| ||||||| ||||  |||| ||||||||||||||||    
T  13114828 tggacactctctct--aacactcactcttttattagataaaatcaatatatgtcccaccactttatatggattccatttccaaaatgt 13114743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 83
Target Start/End: Original strand, 20408755 - 20408835
Alignment:
Q  3 agacaaataattacatacaagcacatataaacacacataaaaattaattaaaatagttctgacgaaaatcaggttgttaca 83  Q
    ||||||||||| ||| ||||  |||||||||||||||||| || ||||||||||| || |  |||||| | ||||||||||    
T  20408755 agacaaataatcacacacaaaaacatataaacacacataataagtaattaaaataattatagcgaaaaacgggttgttaca 20408835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 55
Target Start/End: Original strand, 22615880 - 22615928
Alignment:
Q  7 aaataattacatacaagcacatataaacacacataaaaattaattaaaa 55  Q
    ||||||| |||||||||| ||||||||||||||||| || |||||||||    
T  22615880 aaataatcacatacaagcgcatataaacacacataataaataattaaaa 22615928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 205 - 236
Target Start/End: Original strand, 14341059 - 14341090
Alignment:
Q  205 gagtgttagagagagtgttgaaaagaaagtgt 236  Q
    ||||||||||||||||||||||||||||||||    
T  14341059 gagtgttagagagagtgttgaaaagaaagtgt 14341090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 115 - 178
Target Start/End: Original strand, 18157089 - 18157152
Alignment:
Q  115 attggataaaaccaatgtatgacccaccaatttaagtggaatccatttccaaaatgtgagaccc 178  Q
    ||||||| |||  |||||||| ||||||| |||||||||||  |||||||||| ||||||||||    
T  18157089 attggatgaaattaatgtatgtcccaccactttaagtggaacacatttccaaagtgtgagaccc 18157152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 89 - 143
Target Start/End: Complemental strand, 44807175 - 44807121
Alignment:
Q  89 actctctcttcaacactcattctctcattggataaaaccaatgtatgacccacca 143  Q
    ||||||| ||||||||||||||||| || |||  |||||||||||| ||||||||    
T  44807175 actctcttttcaacactcattctcttatcggaagaaaccaatgtataacccacca 44807121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 85
Target Start/End: Original strand, 17023789 - 17023866
Alignment:
Q  8 aataattacatacaagcacatataaacacacataaaaattaattaaaatagttctgacgaaaatcaggttgttacatg 85  Q
    |||||| ||| ||||||||| || ||||||||  ||||| | | ||||||||||| ||||||||| || |||||||||    
T  17023789 aataatcacacacaagcacaaatgaacacacaataaaataattaaaaatagttctaacgaaaatcgggctgttacatg 17023866  T

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Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 207 - 251
Target Start/End: Complemental strand, 18157078 - 18157034
Alignment:
Q  207 gtgttagagagagtgttgaaaagaaagtgttcatatcatttctca 251  Q
    |||||||||||||||||||||||| ||||| | || |||||||||    
T  18157078 gtgttagagagagtgttgaaaagagagtgtccctagcatttctca 18157034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 7 - 83
Target Start/End: Original strand, 20839178 - 20839253
Alignment:
Q  7 aaataattacatacaagcacatataaacacacataaaaattaattaaaatagttctgacgaaaatcaggttgttaca 83  Q
    ||||||| ||| ||||||||||| ||||||| || |||| ||||||||||| ||||  |||||||| || |||||||    
T  20839178 aaataatcacacacaagcacataaaaacacatattaaaa-taattaaaataattctagcgaaaatcgggctgttaca 20839253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 64; Significance: 8e-28; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 83 - 198
Target Start/End: Original strand, 44350174 - 44350289
Alignment:
Q  83 atggacactctctcttcaacactcattctctcattggataaaaccaatgtatgacccaccaatttaagtggaatccatttccaaaatgtgagacccgcca 182  Q
    ||||||||||||| |||||| |||| | ||| ||||| | |||||||||| |||||||||| ||||||||||||||||||||||| |||||||||| |||    
T  44350174 atggacactctcttttcaaccctcactttctaattggcttaaaccaatgtgtgacccaccattttaagtggaatccatttccaaagtgtgagacccacca 44350273  T
Q  183 taatttaagtcaatta 198  Q
    | ||||||| ||||||    
T  44350274 tgatttaagccaatta 44350289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 92 - 196
Target Start/End: Original strand, 23434724 - 23434827
Alignment:
Q  92 ctctcttcaacactcattctctcattggataaaaccaatgtatgacccaccaatttaagtggaatccatttccaaaatgtgagacccgccataatttaag 191  Q
    |||||||||||||||||||||| |||||||||||||||||||||| |||||| ||||||| |||  |||||| ||| |||||||||| ||||||||||||    
T  23434724 ctctcttcaacactcattctcttattggataaaaccaatgtatgatccaccactttaagt-gaacacatttctaaagtgtgagacccaccataatttaag 23434822  T
Q  192 tcaat 196  Q
     ||||    
T  23434823 ccaat 23434827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 86 - 237
Target Start/End: Complemental strand, 46994521 - 46994370
Alignment:
Q  86 gacactctctcttcaacactcattctctcattggataaaaccaatgtatgacccaccaatttaagtggaatccatttccaaaatgtgagacccgccataa 185  Q
    |||||||| | ||||||| ||||| | | ||| ||| ||| ||||||||||||||||| ||||||||  ||||||||||||| |||||||||| |||| |    
T  46994521 gacactctattttcaacattcatttttttattagatgaaatcaatgtatgacccaccactttaagtgatatccatttccaaagtgtgagacccaccatga 46994422  T
Q  186 tttaagtcaattaaagaacgagtgttagagagagtgttgaaaagaaagtgtt 237  Q
    |||||| |||| ||| |  ||||||||||||||| ||| |||||| ||||||    
T  46994421 tttaagccaataaaaaagtgagtgttagagagagcgttaaaaagagagtgtt 46994370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 95 - 237
Target Start/End: Original strand, 2911792 - 2911934
Alignment:
Q  95 tcttcaacactcattctctcattggataaaaccaatgtatgacccaccaatttaagtggaatccatttccaaaatgtgagacccgccataatttaagtca 194  Q
    ||||||||||||||||||| |||| ||| ||  |||||||||| || || ||||||||||| | ||||| ||| ||||||| || |||| ||||||| ||    
T  2911792 tcttcaacactcattctcttattgaatataattaatgtatgactcatcactttaagtggaacctatttctaaagtgtgagatccaccatgatttaagcca 2911891  T
Q  195 attaaagaacgagtgttagagagagtgttgaaaagaaagtgtt 237  Q
    || ||| |  |||| || |||||||||||||||||||||||||    
T  2911892 ataaaaaagtgagtattggagagagtgttgaaaagaaagtgtt 2911934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 92 - 198
Target Start/End: Complemental strand, 24845582 - 24845476
Alignment:
Q  92 ctctcttcaacactcattctctcattggataaaaccaatgtatgacccaccaatttaagtggaatccatttccaaaatgtgagacccgccataatttaag 191  Q
    |||||||||||| ||| | ||| ||||| | |||||||||| |||||||||| ||||||||||| ||||||||||| |||||||| | |||| |||||||    
T  24845582 ctctcttcaacattcactttctaattggcttaaaccaatgtgtgacccaccactttaagtggaacccatttccaaagtgtgagactcaccatgatttaag 24845483  T
Q  192 tcaatta 198  Q
     ||||||    
T  24845482 ccaatta 24845476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 84 - 237
Target Start/End: Complemental strand, 24539281 - 24539130
Alignment:
Q  84 tggacactctctcttcaacactcattctctcattggataaaaccaatgtatgacccaccaatttaagtggaatccatttccaaaatgtgagacccgccat 183  Q
    ||||||||||||||  |||||||| ||| | ||||||||||| |||| |||| ||||||| ||||  |||| ||||||||||||||||  ||||| |  |    
T  24539281 tggacactctctct--aacactcactcttttattggataaaatcaatatatgtcccaccactttatatggattccatttccaaaatgtatgacccacatt 24539184  T
Q  184 aatttaagtcaattaaagaacgagtgttagagagagtgttgaaaagaaagtgtt 237  Q
     ||||||  |||| | |||  ||||||||||||||||||  |||||| ||||||    
T  24539183 gatttaacccaatgagagagtgagtgttagagagagtgtccaaaagagagtgtt 24539130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 85 - 155
Target Start/End: Complemental strand, 32721086 - 32721016
Alignment:
Q  85 ggacactctctcttcaacactcattctctcattggataaaaccaatgtatgacccaccaatttaagtggaa 155  Q
    ||||||||||| || ||| |||||||| | ||||||||||| |||||||||||||| ||||||||||||||    
T  32721086 ggacactctctttttaactctcattcttttattggataaaatcaatgtatgacccatcaatttaagtggaa 32721016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 93 - 174
Target Start/End: Complemental strand, 33852621 - 33852540
Alignment:
Q  93 tctcttcaacactcattctctcattggataaaaccaatgtatgacccaccaatttaagtggaatccatttccaaaatgtgag 174  Q
    |||||| |||||||||||||| ||| ||| |||  | |||||| ||||||| |||||||||||||||||||||| |||||||    
T  33852621 tctctttaacactcattctcttattagatgaaattagtgtatgtcccaccactttaagtggaatccatttccaatatgtgag 33852540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 84 - 237
Target Start/End: Original strand, 17749716 - 17749867
Alignment:
Q  84 tggacactctctcttcaacactcattctctcattggataaaaccaatgtatgacccaccaatttaagtggaatccatttccaaaatgtgagacccgccat 183  Q
    ||||||||||||||  |||||||| ||| | ||||||||||| |||| |||| ||||||| ||||  |||| | ||||||||||||||  ||||| |  |    
T  17749716 tggacactctctct--aacactcactcttttattggataaaatcaatatatgtcccaccactttatatggatttcatttccaaaatgtatgacccacatt 17749813  T
Q  184 aatttaagtcaattaaagaacgagtgttagagagagtgttgaaaagaaagtgtt 237  Q
     ||||||  |||| | |||  ||||||||||||||||||  |||||| ||||||    
T  17749814 gatttaacccaatgagagagtgagtgttagagagagtgtccaaaagagagtgtt 17749867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 11773361 - 11773292
Alignment:
Q  1 agagacaaataattacatacaagcacatataaacacacataaaaattaattaaaatagttctgacgaaaa 70  Q
    ||||||||||| | ||| |||||||||||||||||||||||| || ||||||||||| || | |||||||    
T  11773361 agagacaaatagtcacacacaagcacatataaacacacataataaataattaaaataattttaacgaaaa 11773292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 94 - 167
Target Start/End: Complemental strand, 29462152 - 29462079
Alignment:
Q  94 ctcttcaacactcattctctcattggataaaaccaatgtatgacccaccaatttaagtggaatccatttccaaa 167  Q
    |||||||||||||||||| | |||| |||||| ||||||||||| ||| | |||||||||||  ||||||||||    
T  29462152 ctcttcaacactcattcttttattgaataaaatcaatgtatgactcactactttaagtggaacacatttccaaa 29462079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 83
Target Start/End: Complemental strand, 13761094 - 13761014
Alignment:
Q  3 agacaaataattacatacaagcacatataaacacacataaaaattaattaaaatagttctgacgaaaatcaggttgttaca 83  Q
    ||||||||||| ||||||||| ||||||||| |||||||| || ||||||||||| |||   |||||| | ||||||||||    
T  13761094 agacaaataatcacatacaagtacatataaatacacataataaataattaaaataattccagcgaaaaacgggttgttaca 13761014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 18083283 - 18083338
Alignment:
Q  7 aaataattacatacaagcacatataaacacacataaaaattaattaaaatagttct 62  Q
    ||||||| ||||||||||||||||||||||| |||| || ||||||||||| ||||    
T  18083283 aaataatcacatacaagcacatataaacacatataataaataattaaaataattct 18083338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 12193169 - 12193250
Alignment:
Q  1 agagacaaataattacatacaagcacatataaacacacataaaaattaattaaaatagttctgacgaaaatcaggttgttaca 83  Q
    |||| ||| |||| ||||||| ||||||||||||||| | |||||||||||||||||  ||| ||||||||| || |||||||    
T  12193169 agaggcaattaatcacatacatgcacatataaacacata-aaaaattaattaaaataaatctaacgaaaatcgggctgttaca 12193250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 128 - 237
Target Start/End: Original strand, 20954743 - 20954852
Alignment:
Q  128 aatgtatgacccaccaatttaagtggaatccatttccaaaatgtgagacccgccataatttaagtcaattaaagaacgagtgttagagagagtgttgaaa 227  Q
    ||||||| |||||| | ||| | |||||  |||||| ||| |||||||| | |||| ||||||| |||| ||| |  ||||||| |||||||||||||||    
T  20954743 aatgtataacccactactttgaatggaactcatttctaaagtgtgagactcaccatgatttaagccaataaaaaagtgagtgtttgagagagtgttgaaa 20954842  T
Q  228 agaaagtgtt 237  Q
    ||| ||||||    
T  20954843 agagagtgtt 20954852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 83
Target Start/End: Original strand, 16095592 - 16095672
Alignment:
Q  3 agacaaataattacatacaagcacatataaacacacataaaaattaattaaaatagttctgacgaaaatcaggttgttaca 83  Q
    |||||| ||| |||| |||| |||||||||||||||||||| | ||||||||||| ||||  | |||| | ||||||||||    
T  16095592 agacaactaagtacaaacaaacacatataaacacacataaataataattaaaataattctagctaaaaacgggttgttaca 16095672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 196
Target Start/End: Original strand, 39523611 - 39523707
Alignment:
Q  100 aacactcattctctcattggataaaaccaatgtatgacccaccaatttaagtggaatccatttccaaaatgtgagacccgccataatttaagtcaat 196  Q
    |||||||||||| | ||||||| |||| |  ||||| | ||||| ||||||||||| |||||||||| |||||||| || || | |||||| |||||    
T  39523611 aacactcattcttttattggatgaaactagggtatgtctcaccactttaagtggaacccatttccaatatgtgagatccaccttgatttaaatcaat 39523707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 224
Target Start/End: Original strand, 25003393 - 25003520
Alignment:
Q  97 ttcaacactcattctctcattggataaaaccaatgtatgacccaccaatttaagtggaatccatttccaaaatgtgagacccgccataatttaagtcaat 196  Q
    ||||||||| ||| | | ||||| | |||| | ||||||| |||||| ||| | |||||  |||||||||| ||||||||||  ||||||||||| ||||    
T  25003393 ttcaacacttatttttttattgggtgaaactattgtatgagccaccattttgaatggaagtcatttccaaagtgtgagacccatcataatttaagccaat 25003492  T
Q  197 taaagaacgagtgttagagagagtgttg 224  Q
     ||| |  |||||||  |||||||||||    
T  25003493 aaaaaagtgagtgttgcagagagtgttg 25003520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 81
Target Start/End: Original strand, 15308083 - 15308133
Alignment:
Q  31 aaacacacataaaaattaattaaaatagttctgacgaaaatcaggttgtta 81  Q
    ||||||| |||||||||||||||||||  ||| ||||||||||| ||||||    
T  15308083 aaacacatataaaaattaattaaaataaatctaacgaaaatcagattgtta 15308133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 88 - 237
Target Start/End: Original strand, 27888308 - 27888454
Alignment:
Q  88 cactctctcttcaacactcattctctcattggataaaaccaatgtatgacccaccaatttaagtggaatccatttccaaaatgtgagacccgccataatt 187  Q
    ||||||||||  ||||||||  |||||||||||||||| ||||||||| ||||||| |||  ||||  || ||||  ||| ||| |||||| | || |||    
T  27888308 cactctctct--aacactcaccctctcattggataaaatcaatgtatgtcccaccactttgtgtgggttcaatttttaaagtgt-agacccacaatgatt 27888404  T
Q  188 taagtcaattaaagaacgagtgttagagagagtgttgaaaagaaagtgtt 237  Q
    |||  |||| | |||  ||||||||||||||||| | |||||| ||||||    
T  27888405 taaaccaataagagagtgagtgttagagagagtgctcaaaagagagtgtt 27888454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 10 - 83
Target Start/End: Original strand, 13378317 - 13378390
Alignment:
Q  10 taattacatacaagcacatataaacacacataaaaattaattaaaatagttctgacgaaaatcaggttgttaca 83  Q
    |||| ||| ||||||||| |||||||||||  |||| |||||||||||  ||| ||||||||| || |||||||    
T  13378317 taatcacacacaagcacaaataaacacacaataaaaataattaaaataaatctaacgaaaatcgggctgttaca 13378390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 85
Target Start/End: Original strand, 16197716 - 16197777
Alignment:
Q  24 cacatataaacacacataaaaattaattaaaatagttctgacgaaaatcaggttgttacatg 85  Q
    |||||||||||||| |||| || ||||||||||| |||| ||||||| | |||||| |||||    
T  16197716 cacatataaacacatataataaataattaaaataattctaacgaaaaacgggttgtaacatg 16197777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 83
Target Start/End: Complemental strand, 17223442 - 17223379
Alignment:
Q  19 acaagcacatataaacacacataaaaattaattaaaatagttctgacgaaaatcaggttgttaca 83  Q
    ||||||||| |||||||||||  ||||| |||||||||| |||| || ||||||||| |||||||    
T  17223442 acaagcacaaataaacacacaataaaat-aattaaaataattctaacaaaaatcaggctgttaca 17223379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 88 - 167
Target Start/End: Complemental strand, 17354681 - 17354604
Alignment:
Q  88 cactctctcttcaacactcattctctcattggataaaaccaatgtatgacccaccaatttaagtggaatccatttccaaa 167  Q
    ||||||||||  |||||||||||| | ||||||| ||| ||||||||| ||||||| |||| ||||  || |||||||||    
T  17354681 cactctctct--aacactcattcttttattggatgaaatcaatgtatgtcccaccactttatgtgggttctatttccaaa 17354604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 198 - 250
Target Start/End: Original strand, 34281056 - 34281108
Alignment:
Q  198 aaagaacgagtgttagagagagtgttgaaaagaaagtgttcatatcatttctc 250  Q
    ||||||| ||||||||||||| |||| |||||| |||||| ||| ||||||||    
T  34281056 aaagaacaagtgttagagagaatgttcaaaagagagtgttgatagcatttctc 34281108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 53; Significance: 3e-21; HSPs: 3)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 6390 - 6310
Alignment:
Q  1 agagacaaataattacatacaagcacatataaacacacataaaaattaattaaaatagttctgacgaaaatcaggttgtta 81  Q
    ||||||||||||| |||||||||||||||||||||||||||| || ||||||||||| ||||  |||||||| ||||||||    
T  6390 agagacaaataatcacatacaagcacatataaacacacataataaataattaaaataattctagcgaaaatcgggttgtta 6310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 13972 - 13892
Alignment:
Q  1 agagacaaataattacatacaagcacatataaacacacataaaaattaattaaaatagttctgacgaaaatcaggttgtta 81  Q
    ||||||||||||| |||||||||||||||||||||||||||| || ||||||||||| ||||  |||||||| ||||||||    
T  13972 agagacaaataatcacatacaagcacatataaacacacataataaataattaaaataattctagcgaaaatcgggttgtta 13892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 23924 - 23844
Alignment:
Q  1 agagacaaataattacatacaagcacatataaacacacataaaaattaattaaaatagttctgacgaaaatcaggttgtta 81  Q
    ||||||||||||| |||||||||||||||||||||||||||| || ||||||||||| ||||  |||||||| ||||||||    
T  23924 agagacaaataatcacatacaagcacatataaacacacataataaataattaaaataattctagcgaaaatcgggttgtta 23844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 3 - 83
Target Start/End: Original strand, 25305 - 25385
Alignment:
Q  3 agacaaataattacatacaagcacatataaacacacataaaaattaattaaaatagttctgacgaaaatcaggttgttaca 83  Q
    |||||| |||| ||||||||||||||||||| |||||||| || ||||||||||| ||||   ||||||| ||||||||||    
T  25305 agacaattaatcacatacaagcacatataaaaacacataataaataattaaaataattctagtgaaaatcgggttgttaca 25385  T

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Target: scaffold0039 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 8629 - 8711
Alignment:
Q  1 agagacaaataattacatacaagcacatataaacacacataaaaattaattaaaatagttctgacgaaaatcaggttgttaca 83  Q
    |||||| | |||| |||||||||||||||||||||||||||| || ||||||||||| ||||  | |||| |||| |||||||    
T  8629 agagacgagtaatcacatacaagcacatataaacacacataataaataattaaaataattctagcaaaaaacaggctgttaca 8711  T

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Target: scaffold0238 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 115 - 196
Target Start/End: Original strand, 15240 - 15321
Alignment:
Q  115 attggataaaaccaatgtatgacccaccaatttaagtggaatccatttccaaaatgtgagacccgccataatttaagtcaat 196  Q
    ||||||||||||||||||||||||||| | ||||| ||| || ||||| |||||||| |||||| | || ||||||| ||||    
T  15240 attggataaaaccaatgtatgacccactagtttaaatggtattcattttcaaaatgtaagacccacaatgatttaagccaat 15321  T

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Target: scaffold0193 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 19685 - 19750
Alignment:
Q  18 tacaagcacatataaacacacataaaaattaattaaaatagttctgacgaaaatcaggttgttaca 83  Q
    |||||||| |||||||||||||||| |||||||||||||| ||||   ||||||||||||| ||||    
T  19685 tacaagcagatataaacacacataataattaattaaaataattctagggaaaatcaggttggtaca 19750  T

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Target: scaffold0338 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 8 - 57
Target Start/End: Original strand, 9849 - 9898
Alignment:
Q  8 aataattacatacaagcacatataaacacacataaaaattaattaaaata 57  Q
    |||||| ||| |||||||||||||||||||||  ||||||||||||||||    
T  9849 aataatcacacacaagcacatataaacacacaataaaattaattaaaata 9898  T

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Target: scaffold0014 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 202275 - 202215
Alignment:
Q  1 agagacaaataattacatacaagcacatataaacacacataaaaattaattaaaatagttct 62  Q
    ||||||||||| | ||||||||||||||||||| |||||||| || ||||||||||| ||||    
T  202275 agagacaaata-tcacatacaagcacatataaatacacataataaataattaaaataattct 202215  T

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Target: scaffold0050 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 78006 - 78058
Alignment:
Q  3 agacaaataattacatacaagcacatataaacacacataaaaattaattaaaa 55  Q
    ||||||||||| |||||||||||| |||||| |||||||| || |||||||||    
T  78006 agacaaataatcacatacaagcacctataaatacacataataaataattaaaa 78058  T

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Target: scaffold0021 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 83
Target Start/End: Original strand, 16774 - 16838
Alignment:
Q  19 acaagcacatataaacacacataaaaattaattaaaatagttctgacgaaaatcaggttgttaca 83  Q
    |||||||||||||||||||||  ||||||||||||||||  ||   |||||||| ||||||||||    
T  16774 acaagcacatataaacacacaataaaattaattaaaataaatcgagcgaaaatcgggttgttaca 16838  T

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Target: scaffold0021; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 83
Target Start/End: Original strand, 26305 - 26369
Alignment:
Q  19 acaagcacatataaacacacataaaaattaattaaaatagttctgacgaaaatcaggttgttaca 83  Q
    |||||||||||||||||||||  ||||||||||||||||  ||   |||||||| ||||||||||    
T  26305 acaagcacatataaacacacaataaaattaattaaaataaatcgagcgaaaatcgggttgttaca 26369  T

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Target: scaffold0183 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 46
Target Start/End: Original strand, 20127 - 20170
Alignment:
Q  3 agacaaataattacatacaagcacatataaacacacataaaaat 46  Q
    ||||||||||| ||||||||||||||||||||| |||| |||||    
T  20127 agacaaataatcacatacaagcacatataaacatacattaaaat 20170  T

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Target: scaffold0007 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 70
Target Start/End: Complemental strand, 204162 - 204099
Alignment:
Q  7 aaataattacatacaagcacatataaacacacataaaaattaattaaaatagttctgacgaaaa 70  Q
    ||||||| ||| |||| || |||||||||||||||| || ||||||||||| |||| |||||||    
T  204162 aaataatcacacacaaacatatataaacacacataataaataattaaaataattctaacgaaaa 204099  T

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Target: scaffold0005 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 205 - 236
Target Start/End: Complemental strand, 296878 - 296847
Alignment:
Q  205 gagtgttagagagagtgttgaaaagaaagtgt 236  Q
    ||||||||||||||||||||||||||||||||    
T  296878 gagtgttagagagagtgttgaaaagaaagtgt 296847  T

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Target: scaffold0001 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 57
Target Start/End: Complemental strand, 151280 - 151241
Alignment:
Q  18 tacaagcacatataaacacacataaaaattaattaaaata 57  Q
    ||||| |||||||||||| |||||||||||||||||||||    
T  151280 tacaatcacatataaacatacataaaaattaattaaaata 151241  T

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Target: scaffold0886 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0886
Description:

Target: scaffold0886; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 92 - 178
Target Start/End: Original strand, 3273 - 3359
Alignment:
Q  92 ctctcttcaacactcattctctcattggataaaaccaatgtatgacccaccaatttaagtggaatccatttccaaaatgtgagaccc 178  Q
    |||||| ||||  ||||||| | ||||||| ||||||||||||||| | ||| ||||| ||| |||||||| |||| ||| ||||||    
T  3273 ctctctccaacgttcattctttaattggatgaaaccaatgtatgactctccactttaaatggtatccattttcaaagtgtaagaccc 3359  T

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Target: scaffold0412 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0412
Description:

Target: scaffold0412; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 3983 - 4037
Alignment:
Q  1 agagacaaataattacatacaagcacatataaacacacataaaaattaattaaaa 55  Q
    ||||||||||||| ||||||||||||| ||||||| ||||||  ||||| |||||    
T  3983 agagacaaataatcacatacaagcacacataaacaaacataatgattaaataaaa 4037  T

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Target: scaffold0018 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 61860 - 61942
Alignment:
Q  1 agagacaaataattacatacaagcacatataaacacacataaaaattaattaaaatagttctgacgaaaatcaggttgttaca 83  Q
    |||||||| |||| ||||| || || ||||| |||||||||| || ||||||||||| ||||  ||||||  |||||||||||    
T  61860 agagacaattaatcacatataaacaaatatagacacacataataaataattaaaataattctagcgaaaaataggttgttaca 61942  T

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Target: scaffold0673 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0673
Description:

Target: scaffold0673; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 6233 - 6184
Alignment:
Q  8 aataattacatacaagcacatataaacacacataaaaattaattaaaata 57  Q
    |||||||||| ||||||||||||||| |||||  |||| |||||||||||    
T  6233 aataattacacacaagcacatataaatacacaataaaagtaattaaaata 6184  T

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Target: scaffold0117 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 10954 - 10905
Alignment:
Q  8 aataattacatacaagcacatataaacacacataaaaattaattaaaata 57  Q
    |||||| ||| |||||||||||||||||||||  |||| |||||||||||    
T  10954 aataatcacacacaagcacatataaacacacaataaaagtaattaaaata 10905  T

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Target: scaffold0035 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 108850 - 108801
Alignment:
Q  8 aataattacatacaagcacatataaacacacataaaaattaattaaaata 57  Q
    |||||| ||| |||||||||||||||||||||  |||| |||||||||||    
T  108850 aataatcacacacaagcacatataaacacacaataaaagtaattaaaata 108801  T

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Target: scaffold0035; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 117351 - 117302
Alignment:
Q  8 aataattacatacaagcacatataaacacacataaaaattaattaaaata 57  Q
    |||||| ||| |||||||||||||||||||||  |||| |||||||||||    
T  117351 aataatcacacacaagcacatataaacacacaataaaagtaattaaaata 117302  T

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Target: scaffold0020 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 109096 - 109141
Alignment:
Q  17 atacaagcacatataaacacacataaaaattaattaaaatagttct 62  Q
    |||||||| |||||||||||| |||| |||||||||||||| ||||    
T  109096 atacaagcgcatataaacacatataataattaattaaaataattct 109141  T

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Target: scaffold0006 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 162
Target Start/End: Complemental strand, 36248 - 36191
Alignment:
Q  105 tcattctctcattggataaaaccaatgtatgacccaccaatttaagtggaatccattt 162  Q
    ||||||| | ||||||| ||||||||||||||||| ||| ||||| ||| ||||||||    
T  36248 tcattcttttattggattaaaccaatgtatgaccctccactttaaatggtatccattt 36191  T

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Target: scaffold1932 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold1932
Description:

Target: scaffold1932; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 811 - 771
Alignment:
Q  4 gacaaataattacatacaagcacatataaacacacataaaa 44  Q
    |||||||||| ||| ||||||||||||||||||| ||||||    
T  811 gacaaataatcacacacaagcacatataaacacatataaaa 771  T

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Target: scaffold0315 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0315
Description:

Target: scaffold0315; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 7 - 83
Target Start/End: Complemental strand, 11935 - 11859
Alignment:
Q  7 aaataattacatacaagcacatataaacacacataaaaattaattaaaatagttctgacgaaaatcaggttgttaca 83  Q
    ||||||| |||||| |||| | |||||||||||||||||  | | ||||||  ||| ||||||||| ||||||||||    
T  11935 aaataatcacatacgagcataaataaacacacataaaaacaattaaaaataaatctaacgaaaatcgggttgttaca 11859  T

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