View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6518_low_34 (Length: 295)

Name: NF6518_low_34
Description: NF6518
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6518_low_34
NF6518_low_34
[»] chr4 (23 HSPs)
chr4 (1-123)||(999290-999412)
chr4 (188-278)||(999135-999225)
chr4 (14-60)||(40742599-40742645)
chr4 (5-59)||(40613449-40613503)
chr4 (14-59)||(5775364-5775409)
chr4 (3-56)||(22440609-22440662)
chr4 (9-58)||(44081584-44081633)
chr4 (6-58)||(3712516-3712568)
chr4 (16-60)||(13134460-13134504)
chr4 (11-59)||(33950141-33950189)
chr4 (13-57)||(36635331-36635375)
chr4 (5-52)||(8423731-8423778)
chr4 (14-53)||(21539879-21539918)
chr4 (6-53)||(37698712-37698759)
chr4 (12-51)||(56257939-56257978)
chr4 (13-59)||(7214528-7214574)
chr4 (14-55)||(903930-903971)
chr4 (15-52)||(6273953-6273990)
chr4 (21-58)||(10499277-10499314)
chr4 (11-59)||(16189714-16189762)
chr4 (3-59)||(26504305-26504361)
chr4 (12-52)||(30838216-30838256)
chr4 (6-58)||(56488517-56488569)
[»] chr5 (30 HSPs)
chr5 (5-58)||(12927653-12927706)
chr5 (5-58)||(27144462-27144515)
chr5 (12-59)||(23012414-23012461)
chr5 (11-59)||(36838548-36838596)
chr5 (12-59)||(16203801-16203848)
chr5 (5-59)||(3966502-3966556)
chr5 (5-59)||(11685938-11685992)
chr5 (14-56)||(33035810-33035852)
chr5 (12-57)||(6471897-6471942)
chr5 (11-60)||(34879355-34879404)
chr5 (13-54)||(35017044-35017085)
chr5 (12-57)||(39205886-39205931)
chr5 (11-59)||(30502394-30502442)
chr5 (11-59)||(30542737-30542785)
chr5 (12-60)||(41091262-41091310)
chr5 (16-59)||(14873527-14873570)
chr5 (4-59)||(23220981-23221036)
chr5 (12-55)||(31682040-31682082)
chr5 (5-59)||(6035482-6035535)
chr5 (3-53)||(10022629-10022679)
chr5 (17-59)||(15086482-15086524)
chr5 (3-49)||(19438340-19438386)
chr5 (6-60)||(23015994-23016048)
chr5 (5-59)||(28588680-28588734)
chr5 (14-59)||(25863212-25863257)
chr5 (12-57)||(28473939-28473984)
chr5 (14-59)||(43554529-43554574)
chr5 (5-49)||(16304440-16304484)
chr5 (14-58)||(32630742-32630786)
chr5 (15-59)||(39696005-39696049)
[»] chr2 (22 HSPs)
chr2 (14-59)||(30527601-30527646)
chr2 (5-57)||(21616761-21616813)
chr2 (11-59)||(34691811-34691859)
chr2 (11-59)||(34714223-34714271)
chr2 (5-60)||(37411249-37411304)
chr2 (13-59)||(5367199-5367245)
chr2 (5-59)||(23718025-23718079)
chr2 (5-59)||(24105697-24105751)
chr2 (6-59)||(44860320-44860373)
chr2 (11-54)||(2423874-2423917)
chr2 (13-56)||(2665897-2665940)
chr2 (12-59)||(20539680-20539727)
chr2 (5-59)||(18276520-18276574)
chr2 (5-59)||(24975331-24975385)
chr2 (5-55)||(28677908-28677958)
chr2 (14-60)||(36281693-36281739)
chr2 (14-59)||(23354658-23354703)
chr2 (5-58)||(31808076-31808129)
chr2 (14-59)||(39279683-39279728)
chr2 (11-59)||(31018595-31018643)
chr2 (27-59)||(34784988-34785020)
chr2 (14-58)||(35449521-35449565)
[»] chr8 (20 HSPs)
chr8 (4-60)||(34897083-34897139)
chr8 (5-56)||(39954288-39954339)
chr8 (12-57)||(14731718-14731763)
chr8 (12-59)||(12606835-12606882)
chr8 (12-59)||(13844602-13844649)
chr8 (11-58)||(20785472-20785519)
chr8 (5-58)||(24362209-24362262)
chr8 (14-59)||(33405390-33405435)
chr8 (7-59)||(34222948-34223000)
chr8 (12-59)||(31236583-31236630)
chr8 (12-58)||(3025557-3025603)
chr8 (5-55)||(4611533-4611583)
chr8 (5-59)||(8342971-8343025)
chr8 (13-59)||(14134706-14134752)
chr8 (13-59)||(15816135-15816181)
chr8 (14-59)||(4786344-4786389)
chr8 (5-50)||(8343315-8343360)
chr8 (14-59)||(11927092-11927137)
chr8 (14-59)||(39820437-39820482)
chr8 (12-60)||(12570513-12570561)
[»] chr6 (34 HSPs)
chr6 (11-59)||(24832593-24832641)
chr6 (12-59)||(7086801-7086848)
chr6 (5-58)||(19040351-19040404)
chr6 (11-59)||(7265599-7265647)
chr6 (12-59)||(7938122-7938169)
chr6 (12-59)||(7996384-7996431)
chr6 (12-59)||(8022370-8022417)
chr6 (12-59)||(9025500-9025547)
chr6 (5-60)||(10842531-10842586)
chr6 (5-59)||(5732516-5732570)
chr6 (13-59)||(9195760-9195806)
chr6 (11-59)||(6665218-6665266)
chr6 (4-60)||(13851734-13851790)
chr6 (12-60)||(26562695-26562743)
chr6 (11-59)||(30866150-30866198)
chr6 (7-59)||(34073353-34073405)
chr6 (12-51)||(8805586-8805625)
chr6 (6-57)||(10888982-10889033)
chr6 (18-61)||(11591874-11591917)
chr6 (16-59)||(13364711-13364754)
chr6 (12-59)||(21924941-21924988)
chr6 (5-59)||(7377978-7378032)
chr6 (5-59)||(9027177-9027231)
chr6 (5-59)||(9629382-9629436)
chr6 (5-59)||(9658878-9658932)
chr6 (14-60)||(21142126-21142172)
chr6 (13-59)||(26178687-26178733)
chr6 (14-59)||(6389751-6389796)
chr6 (14-59)||(9617442-9617487)
chr6 (14-59)||(17168469-17168514)
chr6 (13-58)||(17302354-17302399)
chr6 (14-54)||(677845-677885)
chr6 (15-59)||(2153893-2153937)
chr6 (13-57)||(7151419-7151463)
[»] chr3 (21 HSPs)
chr3 (11-58)||(49505161-49505208)
chr3 (5-59)||(8383256-8383310)
chr3 (12-57)||(11313808-11313853)
chr3 (5-58)||(32804547-32804600)
chr3 (11-59)||(8039841-8039889)
chr3 (13-60)||(29508451-29508498)
chr3 (5-59)||(7928449-7928503)
chr3 (5-59)||(11665943-11665997)
chr3 (12-51)||(27277852-27277891)
chr3 (5-55)||(1438803-1438853)
chr3 (13-59)||(17005625-17005671)
chr3 (12-57)||(10455796-10455841)
chr3 (6-59)||(10690268-10690321)
chr3 (6-51)||(11251978-11252023)
chr3 (7-60)||(11658816-11658869)
chr3 (6-59)||(34307786-34307839)
chr3 (5-58)||(48202276-48202329)
chr3 (17-57)||(15314884-15314924)
chr3 (5-57)||(16192758-16192810)
chr3 (4-52)||(23870572-23870620)
chr3 (13-53)||(29112292-29112332)
[»] chr1 (39 HSPs)
chr1 (5-59)||(38503319-38503373)
chr1 (6-58)||(7918218-7918270)
chr1 (3-57)||(11605943-11605997)
chr1 (13-55)||(14332652-14332694)
chr1 (12-58)||(34712390-34712436)
chr1 (5-59)||(36878460-36878514)
chr1 (5-59)||(39953152-39953206)
chr1 (14-59)||(1864886-1864931)
chr1 (14-59)||(39130773-39130818)
chr1 (3-59)||(9629906-9629962)
chr1 (5-57)||(25098563-25098615)
chr1 (13-57)||(35999330-35999374)
chr1 (11-59)||(44482235-44482283)
chr1 (12-59)||(38075976-38076023)
chr1 (12-55)||(40181877-40181920)
chr1 (12-59)||(46348389-46348436)
chr1 (11-57)||(6427355-6427401)
chr1 (13-55)||(12707883-12707925)
chr1 (13-55)||(12713337-12713379)
chr1 (13-55)||(12717428-12717470)
chr1 (5-59)||(17831537-17831591)
chr1 (5-59)||(21530688-21530742)
chr1 (16-58)||(25361896-25361938)
chr1 (5-59)||(41877476-41877530)
chr1 (5-58)||(398772-398825)
chr1 (13-58)||(10233260-10233305)
chr1 (12-57)||(13436464-13436509)
chr1 (12-53)||(16927197-16927238)
chr1 (18-59)||(25272494-25272535)
chr1 (5-58)||(32724105-32724158)
chr1 (6-59)||(34371714-34371766)
chr1 (14-59)||(52903257-52903302)
chr1 (11-59)||(9709825-9709873)
chr1 (12-56)||(12443469-12443513)
chr1 (14-58)||(16164322-16164366)
chr1 (16-56)||(19324572-19324612)
chr1 (14-58)||(23804436-23804480)
chr1 (14-54)||(26837753-26837793)
chr1 (12-59)||(29229467-29229515)
[»] chr7 (33 HSPs)
chr7 (12-59)||(3721099-3721146)
chr7 (12-59)||(7328697-7328744)
chr7 (5-59)||(9482933-9482987)
chr7 (5-59)||(20549790-20549844)
chr7 (5-59)||(27093419-27093473)
chr7 (5-59)||(27184828-27184882)
chr7 (4-53)||(5235984-5236033)
chr7 (5-58)||(5548675-5548728)
chr7 (14-59)||(15902830-15902875)
chr7 (5-58)||(32308119-32308172)
chr7 (5-57)||(33384590-33384642)
chr7 (12-59)||(3142084-3142131)
chr7 (14-57)||(5233637-5233680)
chr7 (6-57)||(8160416-8160467)
chr7 (11-58)||(17851436-17851483)
chr7 (5-59)||(1433453-1433507)
chr7 (4-58)||(2034439-2034493)
chr7 (5-59)||(2948682-2948736)
chr7 (14-56)||(16341504-16341546)
chr7 (5-59)||(19206049-19206103)
chr7 (5-59)||(26329388-26329442)
chr7 (5-51)||(29787383-29787429)
chr7 (14-59)||(3520348-3520393)
chr7 (14-59)||(8239056-8239101)
chr7 (13-50)||(11831439-11831476)
chr7 (6-59)||(21880152-21880205)
chr7 (13-58)||(22868049-22868094)
chr7 (14-59)||(23128667-23128712)
chr7 (14-59)||(29812670-29812715)
chr7 (11-51)||(2424619-2424659)
chr7 (27-59)||(18213039-18213071)
chr7 (19-59)||(22602716-22602756)
chr7 (6-58)||(42720897-42720949)
[»] scaffold0022 (1 HSPs)
scaffold0022 (14-60)||(90851-90897)
[»] scaffold0123 (1 HSPs)
scaffold0123 (6-59)||(44531-44584)
[»] scaffold0024 (1 HSPs)
scaffold0024 (14-58)||(68249-68293)
[»] scaffold0020 (1 HSPs)
scaffold0020 (12-59)||(135318-135365)
[»] scaffold0697 (1 HSPs)
scaffold0697 (5-59)||(1643-1697)
[»] scaffold0036 (1 HSPs)
scaffold0036 (13-59)||(9753-9799)
[»] scaffold0236 (1 HSPs)
scaffold0236 (14-59)||(25774-25819)
[»] scaffold0044 (1 HSPs)
scaffold0044 (15-59)||(53189-53233)


Alignment Details
Target: chr4 (Bit Score: 119; Significance: 8e-61; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 999412 - 999290
Alignment:
Q  1 agatcgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcgacacgtcgcgcctaatccgaagagtgtccgaggttcattca 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  999412 agatcgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcgacatgtcgcgcctaatccgaagagtgtccgaggttcattca 999313  T
Q  101 taggatataattcatcaggttgc 123  Q
    |||||||||||||||||||||||    
T  999312 taggatataattcatcaggttgc 999290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 188 - 278
Target Start/End: Complemental strand, 999225 - 999135
Alignment:
Q  188 cattctacattataattgtttgaatttcatattctactagagcttatgcattgtatgaatttcatatgacaggaaattgctagacatatct 278  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  999225 cattctacattataattgtttgaatttcatattctactagagcttatgcattgtatgaatttcatatgacaggaaattgctagacatatct 999135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 60
Target Start/End: Original strand, 40742599 - 40742645
Alignment:
Q  14 taataatttgagtaaatcatataatttagtgtaattatatgtgtcga 60  Q
    |||||||||||| |||||||||||| |||||||||||||||||||||    
T  40742599 taataatttgagaaaatcatataatctagtgtaattatatgtgtcga 40742645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 40613449 - 40613503
Alignment:
Q  5 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    ||||| |||||||| |||||| |||||| |||||| |||||||||||||||||||    
T  40613449 cgacaccgctaatattttgagaaaatcacataattcagtgtaattatatgtgtcg 40613503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 59
Target Start/End: Complemental strand, 5775409 - 5775364
Alignment:
Q  14 taataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    |||||||||||| |||||| |||||| |||||||||||||||||||    
T  5775409 taataatttgagaaaatcacataattaagtgtaattatatgtgtcg 5775364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 22440662 - 22440609
Alignment:
Q  3 atcgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtg 56  Q
    ||||||| || |||||||||||| |||||| |||||| ||||||||||||||||    
T  22440662 atcgacaccgttaataatttgagaaaatcacataattcagtgtaattatatgtg 22440609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 44081633 - 44081584
Alignment:
Q  9 atcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtc 58  Q
    |||| |||||||||||  ||||||||||||||| ||||||||||||||||    
T  44081633 atcgttaataatttgaaaaaatcatataatttaatgtaattatatgtgtc 44081584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 3712568 - 3712516
Alignment:
Q  6 gacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtc 58  Q
    |||| ||||||||||||||| ||||||| ||||| | ||||||||||||||||    
T  3712568 gacaccgctaataatttgagaaaatcatgtaattcaatgtaattatatgtgtc 3712516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 60
Target Start/End: Original strand, 13134460 - 13134504
Alignment:
Q  16 ataatttgagtaaatcatataatttagtgtaattatatgtgtcga 60  Q
    ||||||| || |||||| |||||||||||||||||||||||||||    
T  13134460 ataatttaagaaaatcacataatttagtgtaattatatgtgtcga 13134504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 33950141 - 33950189
Alignment:
Q  11 cgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    ||||||||||||||| |||||| |||||||| |||||| ||||||||||    
T  33950141 cgctaataatttgagaaaatcacataatttaatgtaatcatatgtgtcg 33950189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 36635331 - 36635375
Alignment:
Q  13 ctaataatttgagtaaatcatataatttagtgtaattatatgtgt 57  Q
    ||||||||||||| |||||| |||||| |||||||||||||||||    
T  36635331 ctaataatttgagaaaatcacataattcagtgtaattatatgtgt 36635375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 8423778 - 8423731
Alignment:
Q  5 cgacatcgctaataatttgagtaaatcatataatttagtgtaattata 52  Q
    ||||| ||||||||||||||| |||||| |||||| ||||||||||||    
T  8423778 cgacaccgctaataatttgagaaaatcacataattcagtgtaattata 8423731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 53
Target Start/End: Complemental strand, 21539918 - 21539879
Alignment:
Q  14 taataatttgagtaaatcatataatttagtgtaattatat 53  Q
    ||||||||| || |||||||||||||||||||||||||||    
T  21539918 taataatttaagaaaatcatataatttagtgtaattatat 21539879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 53
Target Start/End: Original strand, 37698712 - 37698759
Alignment:
Q  6 gacatcgctaataatttgagtaaatcatataatttagtgtaattatat 53  Q
    |||||| ||||||||||||| |||| |||||||| |||||||||||||    
T  37698712 gacatctctaataatttgagaaaattatataattcagtgtaattatat 37698759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 51
Target Start/End: Original strand, 56257939 - 56257978
Alignment:
Q  12 gctaataatttgagtaaatcatataatttagtgtaattat 51  Q
    |||||||||||||| ||||||||||||| |||||||||||    
T  56257939 gctaataatttgagaaaatcatataattcagtgtaattat 56257978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 7214574 - 7214528
Alignment:
Q  13 ctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    ||||||||||||| |||||| |||||||| |||||||||||| ||||    
T  7214574 ctaataatttgagaaaatcacataatttaatgtaattatatgcgtcg 7214528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 55
Target Start/End: Original strand, 903930 - 903971
Alignment:
Q  14 taataatttgagtaaatcatataatttagtgtaattatatgt 55  Q
    |||||||||||| |||||| |||||| |||||||||||||||    
T  903930 taataatttgagaaaatcacataattcagtgtaattatatgt 903971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 6273953 - 6273990
Alignment:
Q  15 aataatttgagtaaatcatataatttagtgtaattata 52  Q
    ||||||||||| |||| |||||||||||||||||||||    
T  6273953 aataatttgagaaaatgatataatttagtgtaattata 6273990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 58
Target Start/End: Complemental strand, 10499314 - 10499277
Alignment:
Q  21 ttgagtaaatcatataatttagtgtaattatatgtgtc 58  Q
    ||||| |||||| |||||||||||||||||||||||||    
T  10499314 ttgagaaaatcacataatttagtgtaattatatgtgtc 10499277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 16189714 - 16189762
Alignment:
Q  11 cgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    |||||| |||||||| |||||| |||||| ||||||||||| |||||||    
T  16189714 cgctaaaaatttgagaaaatcacataattcagtgtaattatgtgtgtcg 16189762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 26504361 - 26504305
Alignment:
Q  3 atcgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    |||||||  ||||||||||| || |||||| ||| || |||||||||||||||||||    
T  26504361 atcgacactgctaataatttaagaaaatcaaatagttcagtgtaattatatgtgtcg 26504305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 52
Target Start/End: Original strand, 30838216 - 30838256
Alignment:
Q  12 gctaataatttgagtaaatcatataatttagtgtaattata 52  Q
    |||||||||||||  |||| |||||||||||||||||||||    
T  30838216 gctaataatttgataaaattatataatttagtgtaattata 30838256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 56488569 - 56488517
Alignment:
Q  6 gacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtc 58  Q
    |||| |||||| |||||||| ||||||||||||| || ||||| |||||||||    
T  56488569 gacaccgctaacaatttgagaaaatcatataattcagggtaatcatatgtgtc 56488517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 3e-17; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 12927653 - 12927706
Alignment:
Q  5 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtc 58  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  12927653 cgacatcgctaataatttgagaaaatcatataatttagtgtaattatatatgtc 12927706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 27144462 - 27144515
Alignment:
Q  5 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtc 58  Q
    ||||| ||||||||||||||| |||||| |||||||||||||||||||||||||    
T  27144462 cgacaccgctaataatttgaggaaatcacataatttagtgtaattatatgtgtc 27144515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 59
Target Start/End: Complemental strand, 23012461 - 23012414
Alignment:
Q  12 gctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||    
T  23012461 gctaataatttgagaaaatcatataatttaatgtaattatatgtgtcg 23012414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 36838548 - 36838596
Alignment:
Q  11 cgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    ||||||||||||||| |||| | ||||||||||||||||||||||||||    
T  36838548 cgctaataatttgagaaaattacataatttagtgtaattatatgtgtcg 36838596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 59
Target Start/End: Complemental strand, 16203848 - 16203801
Alignment:
Q  12 gctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    |||||||||||||| |||||  ||||||||||||||||||||||||||    
T  16203848 gctaataatttgagaaaatctcataatttagtgtaattatatgtgtcg 16203801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 3966502 - 3966556
Alignment:
Q  5 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    ||||| ||||||||||||||| |||||| | |||| |||||||||||||||||||    
T  3966502 cgacaccgctaataatttgagaaaatcacacaattcagtgtaattatatgtgtcg 3966556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 11685938 - 11685992
Alignment:
Q  5 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    ||||| ||||||||||||||| || ||  ||||||||||||||||||||||||||    
T  11685938 cgacaccgctaataatttgagaaagtcgcataatttagtgtaattatatgtgtcg 11685992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 33035852 - 33035810
Alignment:
Q  14 taataatttgagtaaatcatataatttagtgtaattatatgtg 56  Q
    ||||||||||| |||||||||||||| ||||||||||||||||    
T  33035852 taataatttgaataaatcatataattcagtgtaattatatgtg 33035810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 6471942 - 6471897
Alignment:
Q  12 gctaataatttgagtaaatcatataatttagtgtaattatatgtgt 57  Q
    |||||||||||||| |||||| |||||| |||||||||||||||||    
T  6471942 gctaataatttgagaaaatcacataattcagtgtaattatatgtgt 6471897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 60
Target Start/End: Original strand, 34879355 - 34879404
Alignment:
Q  11 cgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcga 60  Q
    |||||| |||||||| ||||||||||||| |||||||| |||||||||||    
T  34879355 cgctaaaaatttgagaaaatcatataattcagtgtaataatatgtgtcga 34879404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 35017044 - 35017085
Alignment:
Q  13 ctaataatttgagtaaatcatataatttagtgtaattatatg 54  Q
    ||||||||||||| |||||| |||||||||||||||||||||    
T  35017044 ctaataatttgagaaaatcacataatttagtgtaattatatg 35017085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 39205886 - 39205931
Alignment:
Q  12 gctaataatttgagtaaatcatataatttagtgtaattatatgtgt 57  Q
    |||||||||||||| |||||||||||||  ||||||||||||||||    
T  39205886 gctaataatttgagaaaatcatataattaggtgtaattatatgtgt 39205931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 59
Target Start/End: Complemental strand, 30502442 - 30502394
Alignment:
Q  11 cgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    ||||||||||||||| ||||||  ||||| |||||||||||||||||||    
T  30502442 cgctaataatttgagaaaatcacttaattcagtgtaattatatgtgtcg 30502394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 59
Target Start/End: Complemental strand, 30542785 - 30542737
Alignment:
Q  11 cgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    ||||||||||||||| ||||||  ||||| |||||||||||||||||||    
T  30542785 cgctaataatttgagaaaatcacttaattcagtgtaattatatgtgtcg 30542737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 60
Target Start/End: Complemental strand, 41091310 - 41091262
Alignment:
Q  12 gctaataatttgagtaaatcatataatttagtgtaattatatgtgtcga 60  Q
    |||||| ||||||| |||||| |||||| ||||||||||||||||||||    
T  41091310 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgtcga 41091262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 14873527 - 14873570
Alignment:
Q  16 ataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    |||||||||| ||| || ||||||||||||||||||||||||||    
T  14873527 ataatttgagaaaagcacataatttagtgtaattatatgtgtcg 14873570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 59
Target Start/End: Original strand, 23220981 - 23221036
Alignment:
Q  4 tcgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    |||||| ||||||||||||||  |||||| |||||||||||| || ||||||||||    
T  23220981 tcgacaccgctaataatttgataaaatcacataatttagtgttatcatatgtgtcg 23221036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 55
Target Start/End: Original strand, 31682040 - 31682082
Alignment:
Q  12 gctaataatttgagtaaatcatataatttagtgtaattatatgt 55  Q
    |||||||||| ||| |||||||||||||||||||||||||||||    
T  31682040 gctaataatt-gagaaaatcatataatttagtgtaattatatgt 31682082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 6035482 - 6035535
Alignment:
Q  5 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    ||||| ||||||||||||||| |||| |||||||| ||||||||||||| |||||    
T  6035482 cgacaccgctaataatttgag-aaataatataattcagtgtaattatatttgtcg 6035535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 10022629 - 10022679
Alignment:
Q  3 atcgacatcgctaataatttgagtaaatcatataatttagtgtaattatat 53  Q
    |||||||||| | |||||||||  ||||||||||||| |||||||||||||    
T  10022629 atcgacatcgttgataatttgataaaatcatataattcagtgtaattatat 10022679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 59
Target Start/End: Original strand, 15086482 - 15086524
Alignment:
Q  17 taatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    ||||||||| |||||||||||| || |||||||||||||||||    
T  15086482 taatttgagaaaatcatataatgtaatgtaattatatgtgtcg 15086524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 19438340 - 19438386
Alignment:
Q  3 atcgacatcgctaataatttgagtaaatcatataatttagtgtaatt 49  Q
    |||||||||||| |||||||||| |||||| |||||| |||||||||    
T  19438340 atcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 19438386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 23016048 - 23015994
Alignment:
Q  6 gacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcga 60  Q
    ||||||| |||| ||||||| |||||| |||||| |||||||||||| |||||||    
T  23016048 gacatcgttaatcatttgagaaaatcacataattcagtgtaattataggtgtcga 23015994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 59
Target Start/End: Complemental strand, 28588734 - 28588680
Alignment:
Q  5 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    ||||| || |||||||||||| |||||| |||||| |||||||||||| ||||||    
T  28588734 cgacaccggtaataatttgagaaaatcacataattcagtgtaattataggtgtcg 28588680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 59
Target Start/End: Original strand, 25863212 - 25863257
Alignment:
Q  14 taataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    |||||||||||| |||| |||||||| |||||||||||| ||||||    
T  25863212 taataatttgagaaaatgatataattcagtgtaattataagtgtcg 25863257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 28473939 - 28473984
Alignment:
Q  12 gctaataatttgagtaaatcatataatttagtgtaattatatgtgt 57  Q
    |||| ||||||||| ||||| ||||||||||||||||||| |||||    
T  28473939 gctattaatttgagaaaatcgtataatttagtgtaattatgtgtgt 28473984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 59
Target Start/End: Original strand, 43554529 - 43554574
Alignment:
Q  14 taataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    |||||||||||| |||| ||||||||||||||||| ||| ||||||    
T  43554529 taataatttgagaaaatgatataatttagtgtaatcataggtgtcg 43554574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 16304484 - 16304440
Alignment:
Q  5 cgacatcgctaataatttgagtaaatcatataatttagtgtaatt 49  Q
    ||||| |||| || |||||| ||||||||||||||||||||||||    
T  16304484 cgacaccgctgattatttgaataaatcatataatttagtgtaatt 16304440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 32630786 - 32630742
Alignment:
Q  14 taataatttgagtaaatcatataatttagtgtaattatatgtgtc 58  Q
    |||||||||||| |||| |||||||| | ||||||||||||||||    
T  32630786 taataatttgagaaaattatataattcaatgtaattatatgtgtc 32630742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 59
Target Start/End: Complemental strand, 39696049 - 39696005
Alignment:
Q  15 aataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    ||||||||||| |||| ||||||||||||||||| ||| ||||||    
T  39696049 aataatttgagaaaatgatataatttagtgtaatcataggtgtcg 39696005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 14 - 59
Target Start/End: Complemental strand, 30527646 - 30527601
Alignment:
Q  14 taataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    |||||||||||| |||||||||||||||||||||||||||||||||    
T  30527646 taataatttgagaaaatcatataatttagtgtaattatatgtgtcg 30527601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 21616761 - 21616813
Alignment:
Q  5 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgt 57  Q
    ||||| ||||||||||||||| |||||| |||||| |||||||||||||||||    
T  21616761 cgacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgt 21616813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 11 - 59
Target Start/End: Complemental strand, 34691859 - 34691811
Alignment:
Q  11 cgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    ||||||||||||||  ||||||||||||| |||||||||||||||||||    
T  34691859 cgctaataatttgataaaatcatataattcagtgtaattatatgtgtcg 34691811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 11 - 59
Target Start/End: Complemental strand, 34714271 - 34714223
Alignment:
Q  11 cgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    ||||||||||||||  ||||||||||||| |||||||||||||||||||    
T  34714271 cgctaataatttgataaaatcatataattcagtgtaattatatgtgtcg 34714223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 60
Target Start/End: Complemental strand, 37411304 - 37411249
Alignment:
Q  5 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcga 60  Q
    ||||| ||||||||||||||| |||||| |||||| ||||| ||||||||||||||    
T  37411304 cgacaccgctaataatttgagaaaatcacataattcagtgtgattatatgtgtcga 37411249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 5367199 - 5367245
Alignment:
Q  13 ctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    ||||||||||||| |||||| |||||| |||||||||||||||||||    
T  5367199 ctaataatttgaggaaatcacataattcagtgtaattatatgtgtcg 5367245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 23718025 - 23718079
Alignment:
Q  5 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    ||||| ||||||||||||||| || ||| |||||| |||||||||||||||||||    
T  23718025 cgacaccgctaataatttgagaaagtcacataattcagtgtaattatatgtgtcg 23718079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 24105697 - 24105751
Alignment:
Q  5 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    ||||| ||||||||||||||| || ||| |||||| |||||||||||||||||||    
T  24105697 cgacaccgctaataatttgagaaagtcacataattcagtgtaattatatgtgtcg 24105751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 59
Target Start/End: Original strand, 44860320 - 44860373
Alignment:
Q  6 gacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    |||| ||||||||||||||| |||||  |||||| |||||||||||||||||||    
T  44860320 gacaccgctaataatttgagaaaatcgcataattcagtgtaattatatgtgtcg 44860373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 54
Target Start/End: Original strand, 2423874 - 2423917
Alignment:
Q  11 cgctaataatttgagtaaatcatataatttagtgtaattatatg 54  Q
    |||||| |||||||| ||||||||||||||||| ||||||||||    
T  2423874 cgctaaaaatttgagaaaatcatataatttagtataattatatg 2423917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 2665940 - 2665897
Alignment:
Q  13 ctaataatttgagtaaatcatataatttagtgtaattatatgtg 56  Q
    |||||||||| || |||||| |||||||||||||||||||||||    
T  2665940 ctaataattttagaaaatcacataatttagtgtaattatatgtg 2665897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 59
Target Start/End: Complemental strand, 20539727 - 20539680
Alignment:
Q  12 gctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    |||||||||||||  |||||||||||||||||||||||| | ||||||    
T  20539727 gctaataatttgaaaaaatcatataatttagtgtaattacaagtgtcg 20539680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 18276520 - 18276574
Alignment:
Q  5 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    ||||| ||||||||||||||| ||||||  ||||| ||||||||||| |||||||    
T  18276520 cgacaccgctaataatttgagaaaatcacttaattcagtgtaattatgtgtgtcg 18276574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 59
Target Start/End: Complemental strand, 24975385 - 24975331
Alignment:
Q  5 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    ||||| ||||||||||||||| ||||| ||||||| ||||||| |||||| ||||    
T  24975385 cgacaccgctaataatttgagaaaatcgtataattcagtgtaaatatatgcgtcg 24975331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 28677908 - 28677958
Alignment:
Q  5 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgt 55  Q
    ||||| ||||||||||||||  |||||| |||||| |||||||||||||||    
T  28677908 cgacaccgctaataatttgaaaaaatcacataattcagtgtaattatatgt 28677958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 60
Target Start/End: Original strand, 36281693 - 36281739
Alignment:
Q  14 taataatttgagtaaatcatataatttagtgtaattatatgtgtcga 60  Q
    |||||||||||| |||||| ||||||||||||||| |||||| ||||    
T  36281693 taataatttgagaaaatcacataatttagtgtaatcatatgtttcga 36281739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 59
Target Start/End: Complemental strand, 23354703 - 23354658
Alignment:
Q  14 taataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    |||||||||||| |||| ||||||||||||||||| ||| ||||||    
T  23354703 taataatttgagaaaatgatataatttagtgtaatcataggtgtcg 23354658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 31808076 - 31808129
Alignment:
Q  5 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtc 58  Q
    ||||| |||||||||||| |  |||||| |||||| ||||||||||||||||||    
T  31808076 cgacaccgctaataatttaacaaaatcacataattcagtgtaattatatgtgtc 31808129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 59
Target Start/End: Original strand, 39279683 - 39279728
Alignment:
Q  14 taataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    ||||||| |||| |||||| |||||| |||||||||||||||||||    
T  39279683 taataatatgagaaaatcaaataattcagtgtaattatatgtgtcg 39279728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 31018595 - 31018643
Alignment:
Q  11 cgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    |||||||||||| || |||||| || |||||||||||||||| ||||||    
T  31018595 cgctaataatttcagaaaatcacatgatttagtgtaattataggtgtcg 31018643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 59
Target Start/End: Complemental strand, 34785020 - 34784988
Alignment:
Q  27 aaatcatataatttagtgtaattatatgtgtcg 59  Q
    |||||| ||||||||||||||||||||||||||    
T  34785020 aaatcacataatttagtgtaattatatgtgtcg 34784988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 35449521 - 35449565
Alignment:
Q  14 taataatttgagtaaatcatataatttagtgtaattatatgtgtc 58  Q
    |||||||||||| |||||| | |||| ||||||||||||||||||    
T  35449521 taataatttgagaaaatcacagaattcagtgtaattatatgtgtc 35449565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 34897083 - 34897139
Alignment:
Q  4 tcgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcga 60  Q
    |||||| ||||||||||||||| |||||| |||||| ||||||||||||||||||||    
T  34897083 tcgacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtcga 34897139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 39954339 - 39954288
Alignment:
Q  5 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtg 56  Q
    ||||| ||||||||||||||| |||||| |||||||||||||||||||||||    
T  39954339 cgacaccgctaataatttgagaaaatcacataatttagtgtaattatatgtg 39954288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 14731718 - 14731763
Alignment:
Q  12 gctaataatttgagtaaatcatataatttagtgtaattatatgtgt 57  Q
    |||||||||||||| |||||| ||||||||||||||||||||||||    
T  14731718 gctaataatttgagaaaatcacataatttagtgtaattatatgtgt 14731763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 59
Target Start/End: Complemental strand, 12606882 - 12606835
Alignment:
Q  12 gctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    |||||||||||||| ||||||||||||| | |||||||||||||||||    
T  12606882 gctaataatttgagaaaatcatataattcaatgtaattatatgtgtcg 12606835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 59
Target Start/End: Complemental strand, 13844649 - 13844602
Alignment:
Q  12 gctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    |||||||||||||| |||||| |||||| |||||||||||||||||||    
T  13844649 gctaataatttgagaaaatcacataattgagtgtaattatatgtgtcg 13844602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 58
Target Start/End: Complemental strand, 20785519 - 20785472
Alignment:
Q  11 cgctaataatttgagtaaatcatataatttagtgtaattatatgtgtc 58  Q
    ||||||||||||||| |||||| |||||||| ||||||||||||||||    
T  20785519 cgctaataatttgaggaaatcacataatttaatgtaattatatgtgtc 20785472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 24362262 - 24362209
Alignment:
Q  5 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtc 58  Q
    ||||| |||||||||||||||  ||||| |||||| ||||||||||||||||||    
T  24362262 cgacaccgctaataatttgagagaatcacataattcagtgtaattatatgtgtc 24362209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 59
Target Start/End: Complemental strand, 33405435 - 33405390
Alignment:
Q  14 taataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    |||||||||||| ||| || ||||||||||||||||||||||||||    
T  33405435 taataatttgagaaaaacacataatttagtgtaattatatgtgtcg 33405390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 59
Target Start/End: Original strand, 34222948 - 34223000
Alignment:
Q  7 acatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    |||||||||||||||| |  |||||| |||||| |||||||||||||||||||    
T  34222948 acatcgctaataatttaataaaatcacataattaagtgtaattatatgtgtcg 34223000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 59
Target Start/End: Complemental strand, 31236630 - 31236583
Alignment:
Q  12 gctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    |||||||||||||| |||||| |||||| | |||||||||||||||||    
T  31236630 gctaataatttgagaaaatcacataattcaatgtaattatatgtgtcg 31236583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 58
Target Start/End: Original strand, 3025557 - 3025603
Alignment:
Q  12 gctaataatttgagtaaatcatataatttagtgtaattatatgtgtc 58  Q
    |||||||||||||| |||||| |||||| |||||||||||| |||||    
T  3025557 gctaataatttgagaaaatcacataattcagtgtaattataggtgtc 3025603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 4611533 - 4611583
Alignment:
Q  5 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgt 55  Q
    ||||| ||||||||||||||| |||| | |||||| |||||||||||||||    
T  4611533 cgacaccgctaataatttgagaaaataacataattcagtgtaattatatgt 4611583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 8342971 - 8343025
Alignment:
Q  5 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    |||||| |||||||||||||  |||||| ||||||||||||||||| | ||||||    
T  8342971 cgacatagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcg 8343025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 14134706 - 14134752
Alignment:
Q  13 ctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    ||||||||||||| |||||| |||||| ||||||||||||| |||||    
T  14134706 ctaataatttgagaaaatcacataattcagtgtaattatatatgtcg 14134752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 15816181 - 15816135
Alignment:
Q  13 ctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    ||||||||||||  |||||| ||||||||||||||||||| ||||||    
T  15816181 ctaataatttgaaaaaatcacataatttagtgtaattataagtgtcg 15816135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 59
Target Start/End: Complemental strand, 4786389 - 4786344
Alignment:
Q  14 taataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    ||||||||| || |||||| |||||| |||||||||||||||||||    
T  4786389 taataatttaagaaaatcacataattcagtgtaattatatgtgtcg 4786344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 8343315 - 8343360
Alignment:
Q  5 cgacatcgctaataatttgagtaaatcatataatttagtgtaatta 50  Q
    |||||| |||||||||||||  |||||| |||||||||||||||||    
T  8343315 cgacatagctaataatttgaaaaaatcacataatttagtgtaatta 8343360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 59
Target Start/End: Complemental strand, 11927137 - 11927092
Alignment:
Q  14 taataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    |||||||||||  |||||| |||||| |||||||||||||||||||    
T  11927137 taataatttgataaaatcacataattcagtgtaattatatgtgtcg 11927092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 59
Target Start/End: Original strand, 39820437 - 39820482
Alignment:
Q  14 taataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    |||||||||||| |||| ||||||||||||||||| ||| ||||||    
T  39820437 taataatttgagaaaatgatataatttagtgtaatcataggtgtcg 39820482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 60
Target Start/End: Complemental strand, 12570561 - 12570513
Alignment:
Q  12 gctaataatttgagtaaatcatataatttagtgtaattatatgtgtcga 60  Q
    ||||||||||| || ||| || |||||| ||||||||||||||||||||    
T  12570561 gctaataatttaagaaaaacacataattaagtgtaattatatgtgtcga 12570513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 24832593 - 24832641
Alignment:
Q  11 cgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  24832593 cgctaataatttgagaaaatcttataatttagtgtaattatatgtgtcg 24832641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 59
Target Start/End: Original strand, 7086801 - 7086848
Alignment:
Q  12 gctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    |||||||||||||| |||||| ||||||||||||||||||||||||||    
T  7086801 gctaataatttgagaaaatcacataatttagtgtaattatatgtgtcg 7086848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 19040351 - 19040404
Alignment:
Q  5 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtc 58  Q
    ||||| ||||||||||||||| |||||| |||||| ||||||||||||||||||    
T  19040351 cgacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtc 19040404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 11 - 59
Target Start/End: Complemental strand, 7265647 - 7265599
Alignment:
Q  11 cgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    ||||||||||||||| |||||| |||||| |||||||||||||||||||    
T  7265647 cgctaataatttgagaaaatcacataattcagtgtaattatatgtgtcg 7265599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 59
Target Start/End: Original strand, 7938122 - 7938169
Alignment:
Q  12 gctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    |||||||||||||  |||||||||||||||||||||||||| ||||||    
T  7938122 gctaataatttgaaaaaatcatataatttagtgtaattataagtgtcg 7938169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 59
Target Start/End: Complemental strand, 7996431 - 7996384
Alignment:
Q  12 gctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    |||||||||||||| ||||||||||||| |||||||||||||| ||||    
T  7996431 gctaataatttgagaaaatcatataattcagtgtaattatatgcgtcg 7996384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 59
Target Start/End: Original strand, 8022370 - 8022417
Alignment:
Q  12 gctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    |||||||||||||| ||||||||||||| |||||||||||||| ||||    
T  8022370 gctaataatttgagaaaatcatataattcagtgtaattatatgcgtcg 8022417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 59
Target Start/End: Complemental strand, 9025547 - 9025500
Alignment:
Q  12 gctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    |||||||||||||| |||||| |||||| |||||||||||||||||||    
T  9025547 gctaataatttgagaaaatcacataattcagtgtaattatatgtgtcg 9025500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 60
Target Start/End: Original strand, 10842531 - 10842586
Alignment:
Q  5 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcga 60  Q
    ||||| ||||||||||||||  |||||| ||||||||||||||| |||||||||||    
T  10842531 cgacaccgctaataatttgaaaaaatcacataatttagtgtaatcatatgtgtcga 10842586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 59
Target Start/End: Complemental strand, 5732570 - 5732516
Alignment:
Q  5 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    ||||| || |||||||||||| |||||| ||| ||||||||||||||||||||||    
T  5732570 cgacaccgttaataatttgagaaaatcacatattttagtgtaattatatgtgtcg 5732516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 9195806 - 9195760
Alignment:
Q  13 ctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    ||||||||||||| |||| | ||||||||||||||||||||||||||    
T  9195806 ctaataatttgagaaaatgacataatttagtgtaattatatgtgtcg 9195760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 6665218 - 6665266
Alignment:
Q  11 cgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    |||||||||||||||||||||| |||||| || |||||||| |||||||    
T  6665218 cgctaataatttgagtaaatcacataattcagagtaattatttgtgtcg 6665266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 13851734 - 13851790
Alignment:
Q  4 tcgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcga 60  Q
    |||||| ||||||||||||||| |||| |  ||||| ||||||||||||||||||||    
T  13851734 tcgacaccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcga 13851790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 60
Target Start/End: Original strand, 26562695 - 26562743
Alignment:
Q  12 gctaataatttgagtaaatcatataatttagtgtaattatatgtgtcga 60  Q
    ||||| |||||||| |||||| |||||| ||||||||||||||||||||    
T  26562695 gctaaaaatttgagaaaatcacataattcagtgtaattatatgtgtcga 26562743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 59
Target Start/End: Complemental strand, 30866198 - 30866150
Alignment:
Q  11 cgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    ||||||||||||||| |||||| |||||| | |||||||||||||||||    
T  30866198 cgctaataatttgagaaaatcacataattcaatgtaattatatgtgtcg 30866150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 59
Target Start/End: Complemental strand, 34073405 - 34073353
Alignment:
Q  7 acatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    ||||||||||||||||||| |||||  |||||| |||||||||||||| ||||    
T  34073405 acatcgctaataatttgagaaaatctcataattcagtgtaattatatgggtcg 34073353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 51
Target Start/End: Complemental strand, 8805625 - 8805586
Alignment:
Q  12 gctaataatttgagtaaatcatataatttagtgtaattat 51  Q
    |||||||||||||| |||||| ||||||||||||||||||    
T  8805625 gctaataatttgagaaaatcacataatttagtgtaattat 8805586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 57
Target Start/End: Complemental strand, 10889033 - 10888982
Alignment:
Q  6 gacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgt 57  Q
    |||| ||||||||||||||  |||||| |||||||||||| |||||||||||    
T  10889033 gacaccgctaataatttgataaaatcacataatttagtgtgattatatgtgt 10888982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 11591917 - 11591874
Alignment:
Q  18 aatttgagtaaatcatataatttagtgtaattatatgtgtcgac 61  Q
    |||||||| |||||| |||||| |||||||||||||||||||||    
T  11591917 aatttgagaaaatcacataattcagtgtaattatatgtgtcgac 11591874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 13364754 - 13364711
Alignment:
Q  16 ataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    |||||||||| ||||||||||||| |||||||| ||||||||||    
T  13364754 ataatttgagaaaatcatataattcagtgtaatcatatgtgtcg 13364711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 59
Target Start/End: Complemental strand, 21924988 - 21924941
Alignment:
Q  12 gctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    |||||||||||||| | |||| |||||| |||||||||||||||||||    
T  21924988 gctaataatttgagaatatcaaataattcagtgtaattatatgtgtcg 21924941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 7377978 - 7378032
Alignment:
Q  5 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    ||||| |||||| |||||||| |||||| |||||| | |||||||||||||||||    
T  7377978 cgacaccgctaaaaatttgagaaaatcacataattcaatgtaattatatgtgtcg 7378032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 9027177 - 9027231
Alignment:
Q  5 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    ||||| |||||||||||||||  ||||| ||||||  ||||||||||||||||||    
T  9027177 cgacaccgctaataatttgagataatcacataattccgtgtaattatatgtgtcg 9027231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 9629382 - 9629436
Alignment:
Q  5 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    ||||| ||| ||||||||||| |||||| |||||| | |||||||||||||||||    
T  9629382 cgacaccgccaataatttgagaaaatcacataattcaatgtaattatatgtgtcg 9629436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 9658878 - 9658932
Alignment:
Q  5 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    ||||| |||||||||||| || |||||| |||||| ||||||||||||| |||||    
T  9658878 cgacaccgctaataatttaagaaaatcacataattcagtgtaattatatttgtcg 9658932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 60
Target Start/End: Original strand, 21142126 - 21142172
Alignment:
Q  14 taataatttgagtaaatcatataatttagtgtaattatatgtgtcga 60  Q
    |||||||||||| ||||||||||||| ||| || |||||||||||||    
T  21142126 taataatttgagaaaatcatataattcagtctagttatatgtgtcga 21142172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 26178733 - 26178687
Alignment:
Q  13 ctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    ||||||||||||  |||||| ||||||||||||||| ||||||||||    
T  26178733 ctaataatttgataaaatcacataatttagtgtaatcatatgtgtcg 26178687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 59
Target Start/End: Original strand, 6389751 - 6389796
Alignment:
Q  14 taataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    |||||||||||| |||| ||||||||||||||||| ||| ||||||    
T  6389751 taataatttgagaaaatgatataatttagtgtaatcataggtgtcg 6389796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 59
Target Start/End: Original strand, 9617442 - 9617487
Alignment:
Q  14 taataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    |||||||||||| |||||| |||||| | |||||||||||||||||    
T  9617442 taataatttgagaaaatcacataattcaatgtaattatatgtgtcg 9617487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 59
Target Start/End: Complemental strand, 17168514 - 17168469
Alignment:
Q  14 taataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    |||||||||||| |||| ||||||||||||||||| ||| ||||||    
T  17168514 taataatttgagaaaatgatataatttagtgtaataataggtgtcg 17168469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 17302354 - 17302399
Alignment:
Q  13 ctaataatttgagtaaatcatataatttagtgtaattatatgtgtc 58  Q
    |||||||||| || |||||| ||||||| |||||||||||||||||    
T  17302354 ctaataatttaagaaaatcacataattttgtgtaattatatgtgtc 17302399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 677845 - 677885
Alignment:
Q  14 taataatttgagtaaatcatataatttagtgtaattatatg 54  Q
    |||||||||||| |||||||||||| ||||||| |||||||    
T  677845 taataatttgagaaaatcatataatatagtgtatttatatg 677885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 59
Target Start/End: Complemental strand, 2153937 - 2153893
Alignment:
Q  15 aataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    |||||||| || |||| ||||||||||||||||||||| ||||||    
T  2153937 aataatttaagaaaatgatataatttagtgtaattataggtgtcg 2153893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 7151419 - 7151463
Alignment:
Q  13 ctaataatttgagtaaatcatataatttagtgtaattatatgtgt 57  Q
    ||||||||||||  |||||| |||||| |||||||||||||||||    
T  7151419 ctaataatttgaaaaaatcacataattaagtgtaattatatgtgt 7151463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 58
Target Start/End: Complemental strand, 49505208 - 49505161
Alignment:
Q  11 cgctaataatttgagtaaatcatataatttagtgtaattatatgtgtc 58  Q
    ||||||||||||||| |||||| |||||||||||||||||||||||||    
T  49505208 cgctaataatttgagaaaatcacataatttagtgtaattatatgtgtc 49505161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 8383256 - 8383310
Alignment:
Q  5 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    ||||| ||||||||||||||| ||||||||||||| |||||||||||| ||||||    
T  8383256 cgacaccgctaataatttgagaaaatcatataattcagtgtaattataagtgtcg 8383310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 11313853 - 11313808
Alignment:
Q  12 gctaataatttgagtaaatcatataatttagtgtaattatatgtgt 57  Q
    |||||||||||||| |||||| ||||||||||||||||||||||||    
T  11313853 gctaataatttgagaaaatcacataatttagtgtaattatatgtgt 11313808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 32804600 - 32804547
Alignment:
Q  5 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtc 58  Q
    ||||| || |||||||||||| |||||| |||||||||||||||||||||||||    
T  32804600 cgacaccgttaataatttgagaaaatcacataatttagtgtaattatatgtgtc 32804547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 11 - 59
Target Start/End: Complemental strand, 8039889 - 8039841
Alignment:
Q  11 cgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    ||||||||||||||| |||| |||||||| |||||||||||||||||||    
T  8039889 cgctaataatttgagaaaattatataattcagtgtaattatatgtgtcg 8039841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 60
Target Start/End: Original strand, 29508451 - 29508498
Alignment:
Q  13 ctaataatttgagtaaatcatataatttagtgtaattatatgtgtcga 60  Q
    ||||||||||||  ||||||||||||| ||||||||||||||||||||    
T  29508451 ctaataatttgaaaaaatcatataattcagtgtaattatatgtgtcga 29508498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 7928449 - 7928503
Alignment:
Q  5 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    ||||| ||||||||||||||  |||||| |||||| |||||||||||||||||||    
T  7928449 cgacaccgctaataatttgaaaaaatcacataattcagtgtaattatatgtgtcg 7928503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 11665943 - 11665997
Alignment:
Q  5 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    ||||| ||||||||||||||  |||||| | ||||||||||||||||||||||||    
T  11665943 cgacaacgctaataatttgataaaatcacacaatttagtgtaattatatgtgtcg 11665997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 51
Target Start/End: Complemental strand, 27277891 - 27277852
Alignment:
Q  12 gctaataatttgagtaaatcatataatttagtgtaattat 51  Q
    |||||||||||||| |||||| ||||||||||||||||||    
T  27277891 gctaataatttgagaaaatcacataatttagtgtaattat 27277852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 1438803 - 1438853
Alignment:
Q  5 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgt 55  Q
    |||||||||||| |||||||| |||||| |||||| ||| |||||||||||    
T  1438803 cgacatcgctaacaatttgagaaaatcacataattcagtataattatatgt 1438853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 17005671 - 17005625
Alignment:
Q  13 ctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    ||||||||||||  ||||||||||||| |||||||||||| ||||||    
T  17005671 ctaataatttgataaaatcatataattcagtgtaattataagtgtcg 17005625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 10455796 - 10455841
Alignment:
Q  12 gctaataatttgagtaaatcatataatttagtgtaattatatgtgt 57  Q
    ||||||||| |||| ||||||||||| | |||||||||||||||||    
T  10455796 gctaataatatgagaaaatcatataactaagtgtaattatatgtgt 10455841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 59
Target Start/End: Complemental strand, 10690321 - 10690268
Alignment:
Q  6 gacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    |||| |||||||||| |||| |||||| |||||| ||||||||||||| |||||    
T  10690321 gacaccgctaataatctgagaaaatcacataattcagtgtaattatatttgtcg 10690268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 11251978 - 11252023
Alignment:
Q  6 gacatcgctaataatttgagtaaatcatataatttagtgtaattat 51  Q
    ||||| |||||||||||||| |||||| |||||| |||||||||||    
T  11251978 gacattgctaataatttgagaaaatcacataattcagtgtaattat 11252023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 60
Target Start/End: Original strand, 11658816 - 11658869
Alignment:
Q  7 acatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcga 60  Q
    |||||| |||||||||||| |||||  |||||| ||||| ||||||||||||||    
T  11658816 acatcgttaataatttgagaaaatcgcataattcagtgtgattatatgtgtcga 11658869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 59
Target Start/End: Complemental strand, 34307839 - 34307786
Alignment:
Q  6 gacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    |||| ||||||||||||||| |||||| ||| || |||||||||||| ||||||    
T  34307839 gacaccgctaataatttgagaaaatcacatatttcagtgtaattataagtgtcg 34307786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 48202329 - 48202276
Alignment:
Q  5 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtc 58  Q
    |||||||  ||||| |||||| |||||| |||||||| ||||||||||||||||    
T  48202329 cgacatccataatagtttgagaaaatcacataatttaatgtaattatatgtgtc 48202276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 57
Target Start/End: Complemental strand, 15314924 - 15314884
Alignment:
Q  17 taatttgagtaaatcatataatttagtgtaattatatgtgt 57  Q
    ||||||||  |||||| ||||||||||||||||||||||||    
T  15314924 taatttgaaaaaatcacataatttagtgtaattatatgtgt 15314884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 16192810 - 16192758
Alignment:
Q  5 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgt 57  Q
    ||||| || |||||||||||| |||| | |||||| |||||||||||||||||    
T  16192810 cgacaccgttaataatttgagaaaataacataattcagtgtaattatatgtgt 16192758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 23870620 - 23870572
Alignment:
Q  4 tcgacatcgctaataatttgagtaaatcatataatttagtgtaattata 52  Q
    |||||| ||||||||||||||  ||||||||||||| ||||| ||||||    
T  23870620 tcgacaccgctaataatttgaaaaaatcatataattcagtgtgattata 23870572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 29112332 - 29112292
Alignment:
Q  13 ctaataatttgagtaaatcatataatttagtgtaattatat 53  Q
    ||||| ||||||| ||||||||||||| |||||||||||||    
T  29112332 ctaattatttgagaaaatcatataattcagtgtaattatat 29112292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 38503319 - 38503373
Alignment:
Q  5 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    ||||| ||||||||||||||| |||||||||| || |||||||||||||||||||    
T  38503319 cgacaccgctaataatttgagaaaatcatatatttcagtgtaattatatgtgtcg 38503373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 7918270 - 7918218
Alignment:
Q  6 gacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtc 58  Q
    |||||| ||||||||||||| |||||| |||||| ||||||||||||||||||    
T  7918270 gacatcactaataatttgagaaaatcacataattcagtgtaattatatgtgtc 7918218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 11605997 - 11605943
Alignment:
Q  3 atcgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgt 57  Q
    ||||||||||||||||||||||  ||||||||||||| |||| ||||| ||||||    
T  11605997 atcgacatcgctaataatttgaaaaaatcatataattcagtgaaattacatgtgt 11605943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 14332694 - 14332652
Alignment:
Q  13 ctaataatttgagtaaatcatataatttagtgtaattatatgt 55  Q
    ||||||||||||| |||||| ||||||||||||||||||||||    
T  14332694 ctaataatttgagaaaatcacataatttagtgtaattatatgt 14332652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 34712436 - 34712390
Alignment:
Q  12 gctaataatttgagtaaatcatataatttagtgtaattatatgtgtc 58  Q
    |||||||||||||| |||| | |||||||||||||||||||||||||    
T  34712436 gctaataatttgagaaaataacataatttagtgtaattatatgtgtc 34712390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 36878460 - 36878514
Alignment:
Q  5 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    ||||| ||||||||||||||| |||||| |||||| |||||||||||| ||||||    
T  36878460 cgacaccgctaataatttgagaaaatcacataattcagtgtaattataggtgtcg 36878514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 59
Target Start/End: Complemental strand, 39953206 - 39953152
Alignment:
Q  5 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    ||||| |||||||||||| || |||||| |||||||||||||||| |||||||||    
T  39953206 cgacaccgctaataattttagaaaatcacataatttagtgtaattgtatgtgtcg 39953152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 59
Target Start/End: Complemental strand, 1864931 - 1864886
Alignment:
Q  14 taataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    |||||||||||| |||||| |||||| |||||||||||||||||||    
T  1864931 taataatttgagaaaatcacataattcagtgtaattatatgtgtcg 1864886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 59
Target Start/End: Complemental strand, 39130818 - 39130773
Alignment:
Q  14 taataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    ||||||||| || |||| ||||||||||||||||||||||||||||    
T  39130818 taataattttagaaaattatataatttagtgtaattatatgtgtcg 39130773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 9629962 - 9629906
Alignment:
Q  3 atcgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    ||||||| ||||||||||||||  ||||||||||||| ||||| |||||| ||||||    
T  9629962 atcgacaccgctaataatttgataaaatcatataattcagtgtgattataagtgtcg 9629906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 25098615 - 25098563
Alignment:
Q  5 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgt 57  Q
    ||||| |||| |||||||||| |||||| |||||| |||||||||||||||||    
T  25098615 cgacaccgctgataatttgagaaaatcacataattcagtgtaattatatgtgt 25098563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 35999374 - 35999330
Alignment:
Q  13 ctaataatttgagtaaatcatataatttagtgtaattatatgtgt 57  Q
    |||||||||| || ||||||||||||||||| |||||||||||||    
T  35999374 ctaataatttaagaaaatcatataatttagtataattatatgtgt 35999330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 44482235 - 44482283
Alignment:
Q  11 cgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    |||| |||||||||| |||||| |||||| |||||||||||||||||||    
T  44482235 cgcttataatttgagaaaatcacataattcagtgtaattatatgtgtcg 44482283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 59
Target Start/End: Complemental strand, 38076023 - 38075976
Alignment:
Q  12 gctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    ||||||||||||||||||||| |||| | |||||||| ||||||||||    
T  38076023 gctaataatttgagtaaatcacataagtcagtgtaatcatatgtgtcg 38075976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 55
Target Start/End: Original strand, 40181877 - 40181920
Alignment:
Q  12 gctaataatttgagtaaatcatataatttagtgtaattatatgt 55  Q
    |||||||||||||| |||||| |||||| |||||||||||||||    
T  40181877 gctaataatttgagaaaatcacataattcagtgtaattatatgt 40181920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 59
Target Start/End: Complemental strand, 46348436 - 46348389
Alignment:
Q  12 gctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    |||||||||||||  |||||||||||||||||||||||| | ||||||    
T  46348436 gctaataatttgaaaaaatcatataatttagtgtaattacaagtgtcg 46348389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 57
Target Start/End: Original strand, 6427355 - 6427401
Alignment:
Q  11 cgctaataatttgagtaaatcatataatttagtgtaattatatgtgt 57  Q
    ||||||||||||||| |||||| |||||| | |||||||||||||||    
T  6427355 cgctaataatttgagaaaatcacataattcaatgtaattatatgtgt 6427401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 12707925 - 12707883
Alignment:
Q  13 ctaataatttgagtaaatcatataatttagtgtaattatatgt 55  Q
    |||||||||| || |||||||||||||||||| ||||||||||    
T  12707925 ctaataatttaagaaaatcatataatttagtgcaattatatgt 12707883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 12713379 - 12713337
Alignment:
Q  13 ctaataatttgagtaaatcatataatttagtgtaattatatgt 55  Q
    |||||||||| || |||||| ||||||||||||||||||||||    
T  12713379 ctaataatttaagaaaatcacataatttagtgtaattatatgt 12713337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 12717470 - 12717428
Alignment:
Q  13 ctaataatttgagtaaatcatataatttagtgtaattatatgt 55  Q
    |||||||||| || |||||| ||||||||||||||||||||||    
T  12717470 ctaataatttaagaaaatcacataatttagtgtaattatatgt 12717428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 59
Target Start/End: Complemental strand, 17831591 - 17831537
Alignment:
Q  5 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    ||||| ||||||||||||||| |||||| || ||| |||||||| ||||||||||    
T  17831591 cgacaccgctaataatttgagaaaatcacattattcagtgtaatcatatgtgtcg 17831537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 21530688 - 21530742
Alignment:
Q  5 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    ||||| || |||||||||||| |||||||||||||| || |||||||| ||||||    
T  21530688 cgacaccgttaataatttgagaaaatcatataatttggtataattataagtgtcg 21530742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 58
Target Start/End: Original strand, 25361896 - 25361938
Alignment:
Q  16 ataatttgagtaaatcatataatttagtgtaattatatgtgtc 58  Q
    |||||||||| |||||| |||||| ||||||||||||||||||    
T  25361896 ataatttgagaaaatcacataattcagtgtaattatatgtgtc 25361938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 59
Target Start/End: Complemental strand, 41877530 - 41877476
Alignment:
Q  5 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    ||||| ||||||||||||||| |||| | ||||||||||||||||| | ||||||    
T  41877530 cgacaccgctaataatttgagaaaattacataatttagtgtaattacaagtgtcg 41877476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 398825 - 398772
Alignment:
Q  5 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtc 58  Q
    ||||| ||||||||||||||  |||||| |||||| |||||||||||| |||||    
T  398825 cgacaccgctaataatttgaaaaaatcacataattcagtgtaattataggtgtc 398772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 10233260 - 10233305
Alignment:
Q  13 ctaataatttgagtaaatcatataatttagtgtaattatatgtgtc 58  Q
    ||||||| ||||| |||||| |||||| ||||||||||||||||||    
T  10233260 ctaataaattgagaaaatcacataattcagtgtaattatatgtgtc 10233305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 13436464 - 13436509
Alignment:
Q  12 gctaataatttgagtaaatcatataatttagtgtaattatatgtgt 57  Q
    ||||||||||| || |||||| |||||| |||||||||||||||||    
T  13436464 gctaataatttaaggaaatcacataattcagtgtaattatatgtgt 13436509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 53
Target Start/End: Complemental strand, 16927238 - 16927197
Alignment:
Q  12 gctaataatttgagtaaatcatataatttagtgtaattatat 53  Q
    |||||||||||||  ||||||||||||| |||||||||||||    
T  16927238 gctaataatttgaaaaaatcatataattcagtgtaattatat 16927197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 59
Target Start/End: Original strand, 25272494 - 25272535
Alignment:
Q  18 aatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    |||||||| |||||| ||||||||||||||||||| ||||||    
T  25272494 aatttgagaaaatcacataatttagtgtaattataagtgtcg 25272535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 32724158 - 32724105
Alignment:
Q  5 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtc 58  Q
    |||||||| |||||||||||| || | | |||||||| ||||||||||||||||    
T  32724158 cgacatcgttaataatttgagaaatttacataatttaatgtaattatatgtgtc 32724105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 59
Target Start/End: Original strand, 34371714 - 34371766
Alignment:
Q  6 gacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    |||| ||||||||||| ||| |||||| |||||| |||||||||||||||||||    
T  34371714 gacaccgctaataatt-gagaaaatcacataattcagtgtaattatatgtgtcg 34371766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 59
Target Start/End: Original strand, 52903257 - 52903302
Alignment:
Q  14 taataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    ||||||||| |  ||||||||||||| |||||||||||||||||||    
T  52903257 taataatttaataaaatcatataattcagtgtaattatatgtgtcg 52903302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 9709825 - 9709873
Alignment:
Q  11 cgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    ||||||||||||||| |||||| ||||||   |||||||||||||||||    
T  9709825 cgctaataatttgagaaaatcacataattcgttgtaattatatgtgtcg 9709873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 12443513 - 12443469
Alignment:
Q  12 gctaataatttgagtaaatcatataatttagtgtaattatatgtg 56  Q
    |||||||||||||| |||||| |||||| ||||||||| ||||||    
T  12443513 gctaataatttgagaaaatcacataattcagtgtaattgtatgtg 12443469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 16164366 - 16164322
Alignment:
Q  14 taataatttgagtaaatcatataatttagtgtaattatatgtgtc 58  Q
    |||||||||||  |||||| |||||||| ||||||||||||||||    
T  16164366 taataatttgaaaaaatcacataatttaatgtaattatatgtgtc 16164322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 56
Target Start/End: Original strand, 19324572 - 19324612
Alignment:
Q  16 ataatttgagtaaatcatataatttagtgtaattatatgtg 56  Q
    |||||||||| |||||| |||||| ||||||||||||||||    
T  19324572 ataatttgagaaaatcacataattcagtgtaattatatgtg 19324612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 23804436 - 23804480
Alignment:
Q  14 taataatttgagtaaatcatataatttagtgtaattatatgtgtc 58  Q
    |||||||||||  |||| |||||||||| ||||||||||||||||    
T  23804436 taataatttgataaaattatataatttaatgtaattatatgtgtc 23804480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 26837793 - 26837753
Alignment:
Q  14 taataatttgagtaaatcatataatttagtgtaattatatg 54  Q
    |||||||||||  |||| |||||||||||||||||||||||    
T  26837793 taataatttgaaaaaataatataatttagtgtaattatatg 26837753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 59
Target Start/End: Original strand, 29229467 - 29229515
Alignment:
Q  12 gctaataatttgagtaaatcatataatttagt-gtaattatatgtgtcg 59  Q
    |||||||||||||| |||||| || ||||||| ||||||||||||||||    
T  29229467 gctaataatttgagaaaatcacatgatttagtggtaattatatgtgtcg 29229515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 36; Significance: 0.00000000003; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 59
Target Start/End: Original strand, 3721099 - 3721146
Alignment:
Q  12 gctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    |||||||||||||| |||||| |||||||||| |||||||||||||||    
T  3721099 gctaataatttgagaaaatcacataatttagtataattatatgtgtcg 3721146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 59
Target Start/End: Complemental strand, 7328744 - 7328697
Alignment:
Q  12 gctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    |||||||||||||| |||| | ||||||||||||||||||||||||||    
T  7328744 gctaataatttgagaaaataacataatttagtgtaattatatgtgtcg 7328697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 9482933 - 9482987
Alignment:
Q  5 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    |||||||||| |||||||||| |||||| | |||| |||||||||||||||||||    
T  9482933 cgacatcgctgataatttgagaaaatcacacaattcagtgtaattatatgtgtcg 9482987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 20549790 - 20549844
Alignment:
Q  5 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    ||||| ||||||||||||||| ||||||  ||||| |||||||||||||||||||    
T  20549790 cgacaccgctaataatttgagaaaatcacgtaattcagtgtaattatatgtgtcg 20549844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 59
Target Start/End: Complemental strand, 27093473 - 27093419
Alignment:
Q  5 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    ||||| |||||||||||| || |||||| ||||||||||||||||||||| ||||    
T  27093473 cgacaccgctaataatttaagaaaatcacataatttagtgtaattatatgcgtcg 27093419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 27184828 - 27184882
Alignment:
Q  5 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    ||||| |||||||||||| || |||||| ||||||||||||||||||||| ||||    
T  27184828 cgacaccgctaataatttaagaaaatcacataatttagtgtaattatatgcgtcg 27184882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 5235984 - 5236033
Alignment:
Q  4 tcgacatcgctaataatttgagtaaatcatataatttagtgtaattatat 53  Q
    |||||| |||||||||||| || |||| ||||||||||||||||||||||    
T  5235984 tcgacaccgctaataatttaagaaaattatataatttagtgtaattatat 5236033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 5548675 - 5548728
Alignment:
Q  5 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtc 58  Q
    ||||| |||| |||||||||| |||||| |||||| ||||||||||||||||||    
T  5548675 cgacaccgctgataatttgagaaaatcaaataattcagtgtaattatatgtgtc 5548728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 59
Target Start/End: Original strand, 15902830 - 15902875
Alignment:
Q  14 taataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    |||||||||||  |||||| ||||||||||||||||||||||||||    
T  15902830 taataatttgataaaatcacataatttagtgtaattatatgtgtcg 15902875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 32308119 - 32308172
Alignment:
Q  5 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtc 58  Q
    ||||| ||||||||||||||| |||||| |||||| ||||||||| ||||||||    
T  32308119 cgacaccgctaataatttgagaaaatcacataattcagtgtaattgtatgtgtc 32308172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 33384642 - 33384590
Alignment:
Q  5 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgt 57  Q
    ||||| || ||||||| |||| ||||| |||||||||||||||||||||||||    
T  33384642 cgacaccgttaataatctgagaaaatcctataatttagtgtaattatatgtgt 33384590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 59
Target Start/End: Complemental strand, 3142131 - 3142084
Alignment:
Q  12 gctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    |||||||| ||||||||||||||||||| | |||||| ||||||||||    
T  3142131 gctaataaattgagtaaatcatataattcaatgtaatcatatgtgtcg 3142084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 5233637 - 5233680
Alignment:
Q  14 taataatttgagtaaatcatataatttagtgtaattatatgtgt 57  Q
    |||||||||||| |||||| ||||| ||||||||||||||||||    
T  5233637 taataatttgagaaaatcacataatctagtgtaattatatgtgt 5233680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 57
Target Start/End: Original strand, 8160416 - 8160467
Alignment:
Q  6 gacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgt 57  Q
    |||| |||||||||||| || |||| | ||||||||||||||||||||||||    
T  8160416 gacaccgctaataatttaagaaaattacataatttagtgtaattatatgtgt 8160467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 58
Target Start/End: Original strand, 17851436 - 17851483
Alignment:
Q  11 cgctaataatttgagtaaatcatataatttagtgtaattatatgtgtc 58  Q
    |||||||||||| || |||||| |||||| ||||||||||||||||||    
T  17851436 cgctaataattttagaaaatcacataattcagtgtaattatatgtgtc 17851483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 1433453 - 1433507
Alignment:
Q  5 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    ||||| || |||||||||||| |||||| || |||| ||||||||||||||||||    
T  1433453 cgacaccgttaataatttgagaaaatcacatcatttggtgtaattatatgtgtcg 1433507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 2034439 - 2034493
Alignment:
Q  4 tcgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtc 58  Q
    |||||| | ||||||||||||| | ||||||||||||||||||  ||||||||||    
T  2034439 tcgacaccactaataatttgagaatatcatataatttagtgtatatatatgtgtc 2034493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 2948682 - 2948736
Alignment:
Q  5 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    ||||| |||| ||||||| || ||||||  |||||||||||||||||||||||||    
T  2948682 cgacaccgctgataattttagaaaatcacgtaatttagtgtaattatatgtgtcg 2948736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 56
Target Start/End: Original strand, 16341504 - 16341546
Alignment:
Q  14 taataatttgagtaaatcatataatttagtgtaattatatgtg 56  Q
    |||||||||||| |||||| |||||| ||||||||||||||||    
T  16341504 taataatttgagaaaatcacataattaagtgtaattatatgtg 16341546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 19206049 - 19206103
Alignment:
Q  5 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    ||||| ||||||||||||||| |||||| |||||| | | |||||||||||||||    
T  19206049 cgacaccgctaataatttgagaaaatcacataattcattataattatatgtgtcg 19206103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 59
Target Start/End: Complemental strand, 26329442 - 26329388
Alignment:
Q  5 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    |||||||| |||||||||||| ||| || | |||| |||||||||||||||||||    
T  26329442 cgacatcgttaataatttgagaaaaacacacaattcagtgtaattatatgtgtcg 26329388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 51
Target Start/End: Complemental strand, 29787429 - 29787383
Alignment:
Q  5 cgacatcgctaataatttgagtaaatcatataatttagtgtaattat 51  Q
    ||||| ||||||||||||||| |||||| |||||| |||||||||||    
T  29787429 cgacaccgctaataatttgagaaaatcacataattcagtgtaattat 29787383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 59
Target Start/End: Complemental strand, 3520393 - 3520348
Alignment:
Q  14 taataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    |||| ||||||| ||||||||||||| | |||||||||||||||||    
T  3520393 taatcatttgagaaaatcatataattcaatgtaattatatgtgtcg 3520348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 59
Target Start/End: Complemental strand, 8239101 - 8239056
Alignment:
Q  14 taataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    ||||||||| || ||||| ||||||| |||||||||||||||||||    
T  8239101 taataatttaagaaaatcttataattcagtgtaattatatgtgtcg 8239056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 50
Target Start/End: Original strand, 11831439 - 11831476
Alignment:
Q  13 ctaataatttgagtaaatcatataatttagtgtaatta 50  Q
    ||||||||||||  ||||||||||||||||||||||||    
T  11831439 ctaataatttgaaaaaatcatataatttagtgtaatta 11831476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 59
Target Start/End: Original strand, 21880152 - 21880205
Alignment:
Q  6 gacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    |||||||||||||||||||| |||| | |||||| |||||||||| | ||||||    
T  21880152 gacatcgctaataatttgagaaaattacataattcagtgtaattacaagtgtcg 21880205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 22868049 - 22868094
Alignment:
Q  13 ctaataatttgagtaaatcatataatttagtgtaattatatgtgtc 58  Q
    |||||||| |||| |||||| |||||| ||||||||||||||||||    
T  22868049 ctaataatatgagaaaatcacataattcagtgtaattatatgtgtc 22868094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 59
Target Start/End: Complemental strand, 23128712 - 23128667
Alignment:
Q  14 taataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    |||||||||||| ||| ||||||||| |||||||| ||||||||||    
T  23128712 taataatttgagaaaaccatataattcagtgtaatcatatgtgtcg 23128667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 59
Target Start/End: Complemental strand, 29812715 - 29812670
Alignment:
Q  14 taataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    |||||||||||| |||| ||||||||||||||||| ||| ||||||    
T  29812715 taataatttgagaaaatgatataatttagtgtaatcataggtgtcg 29812670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 51
Target Start/End: Original strand, 2424619 - 2424659
Alignment:
Q  11 cgctaataatttgagtaaatcatataatttagtgtaattat 51  Q
    ||||||||||||||| |||||| |||||| |||||||||||    
T  2424619 cgctaataatttgagaaaatcacataattcagtgtaattat 2424659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 59
Target Start/End: Complemental strand, 18213071 - 18213039
Alignment:
Q  27 aaatcatataatttagtgtaattatatgtgtcg 59  Q
    |||||| ||||||||||||||||||||||||||    
T  18213071 aaatcacataatttagtgtaattatatgtgtcg 18213039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 22602756 - 22602716
Alignment:
Q  19 atttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    ||||||| |||||| |||||| |||||||||||||||||||    
T  22602756 atttgagaaaatcacataattcagtgtaattatatgtgtcg 22602716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 42720949 - 42720897
Alignment:
Q  6 gacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtc 58  Q
    |||| ||||||||||||||  |||||| |||||| | ||||||||||||||||    
T  42720949 gacaccgctaataatttgaaaaaatcacataattaaatgtaattatatgtgtc 42720897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 60
Target Start/End: Original strand, 90851 - 90897
Alignment:
Q  14 taataatttgagtaaatcatataatttagtgtaattatatgtgtcga 60  Q
    |||||||||||| ||||||||||||| ||||||||||||| ||||||    
T  90851 taataatttgagaaaatcatataattcagtgtaattatatatgtcga 90897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 59
Target Start/End: Complemental strand, 44584 - 44531
Alignment:
Q  6 gacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    |||| |||||| |||||||| |||||| |||||| |||||||||||||||||||    
T  44584 gacaccgctaaaaatttgagaaaatcacataattcagtgtaattatatgtgtcg 44531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 68293 - 68249
Alignment:
Q  14 taataatttgagtaaatcatataatttagtgtaattatatgtgtc 58  Q
    |||||||||||| ||||||||||||||||| |||||||| |||||    
T  68293 taataatttgagaaaatcatataatttagtataattataggtgtc 68249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 59
Target Start/End: Complemental strand, 135365 - 135318
Alignment:
Q  12 gctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    |||||||||||||| |||||| ||||||  ||||||||||||||||||    
T  135365 gctaataatttgagaaaatcacataattctgtgtaattatatgtgtcg 135318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0697 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 1643 - 1697
Alignment:
Q  5 cgacatcgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    ||||| || |||||||||||| |||||||||||||| || |||||||| ||||||    
T  1643 cgacaccgttaataatttgagaaaatcatataatttggtataattataagtgtcg 1697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 9799 - 9753
Alignment:
Q  13 ctaataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    ||||||||||||| ||||||  ||||| |||||||||||||||||||    
T  9799 ctaataatttgagaaaatcacttaattcagtgtaattatatgtgtcg 9753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 59
Target Start/End: Complemental strand, 25819 - 25774
Alignment:
Q  14 taataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    |||||||| ||| |||||| ||||||||||||||||||| ||||||    
T  25819 taataattagagaaaatcacataatttagtgtaattataagtgtcg 25774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 59
Target Start/End: Original strand, 53189 - 53233
Alignment:
Q  15 aataatttgagtaaatcatataatttagtgtaattatatgtgtcg 59  Q
    ||||||||||| |||||| |||||| |||||||||||| ||||||    
T  53189 aataatttgagaaaatcacataattcagtgtaattataagtgtcg 53233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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