View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6518_low_42 (Length: 257)
Name: NF6518_low_42
Description: NF6518
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6518_low_42 |
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Alignment Details
Target: chr8 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 14 - 245
Target Start/End: Original strand, 13972764 - 13972995
Alignment:
| Q |
14 |
gctattttcttgtcaaattgcatggaaattgaaatctaagttttcctaaacttgcttctcaaaatcagtccctaaaatttacaaaacaaaatatattaca |
113 |
Q |
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| T |
13972764 |
gctattttcttgtcaaattgcatggaaattgaaatctaagttttcctaaacttgcttctcaaaatcagtccctaaaatttacaaaacaaaatatattaca |
13972863 |
T |
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| Q |
114 |
tatcaaattatataagaccatatgattaatggtactgaatgcacatataattacacaaaccagtactttaaccagtattacaaattctaccatcaaacat |
213 |
Q |
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| T |
13972864 |
tatcaaattatataagaccatatgattaatggtactgaatgcacatataattacacacaccagtactttaaccagtattacaaattctaccatcaaacat |
13972963 |
T |
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| Q |
214 |
aatactccacaacagaaaacatcacacagtat |
245 |
Q |
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|||||| ||||||||||||||||||||||||| |
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| T |
13972964 |
aatacttcacaacagaaaacatcacacagtat |
13972995 |
T |
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