View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6518_low_43 (Length: 252)
Name: NF6518_low_43
Description: NF6518
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6518_low_43 |
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Alignment Details
Target: chr7 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 16 - 245
Target Start/End: Original strand, 3659853 - 3660094
Alignment:
| Q |
16 |
caaatctcacactcttcttcactctaggttgaattacttgcctttgaacaaagacaccatttttgttcccatcccttctagcgaccacaacatcagttac |
115 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3659853 |
caaatctcacactcttcttcactctaggttgaattacttgcctttgaacaaagacaccatttttgttcccatcccttctagcgaccacaacatcagttac |
3659952 |
T |
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| Q |
116 |
tccatcgtcatcata------------atcatgaacgctctcctcattctctaaaccttcctcatcatctccataaaccttacacaatttgctaatcttc |
203 |
Q |
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||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3659953 |
tccatcgtcatcataatcatcatcatcatcatgaacgctctcctcattctctaaaccttcctcatcatctccataaaccttacacaatttgctaatcttc |
3660052 |
T |
|
| Q |
204 |
tcaactctccccctcaaattcttcaacagcttcttcttctca |
245 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |
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| T |
3660053 |
tcaactctccccctcaaattcttcaacagcttcttcttctca |
3660094 |
T |
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