View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6519_low_6 (Length: 268)
Name: NF6519_low_6
Description: NF6519
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6519_low_6 |
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Alignment Details
Target: chr7 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 16 - 253
Target Start/End: Original strand, 26529035 - 26529282
Alignment:
| Q |
16 |
acaatagagagaagtgctcatgaaaaataaatcgaactaagaaacaaaacaacattcttagaaatgtaagctctagattagcaattatatttctttcacg |
115 |
Q |
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| T |
26529035 |
acaatagagagaagtgctcatgaaaaataaatcgaactaagaaacgaaacaacattcttagaaatgtaagctctagattagcaattatatttcattcacg |
26529134 |
T |
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| Q |
116 |
ttaaatatggtttatttgcacatgtcatctcagcttcaatactttatggattagaggaactatagtgaggatattcccattgacatt----------aaa |
205 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
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| T |
26529135 |
ttaaatatggtttatttgcacatgtcatctcagcttcaatactttatggattagaggaactatagtgaggatattcccattgacattaaaactttcaaaa |
26529234 |
T |
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| Q |
206 |
atcacgccgattagaatcttctggttacttgacactagaattcaaact |
253 |
Q |
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|||| ||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
26529235 |
atcatgccgattagaatcttctagttacttgacactagaattcaaact |
26529282 |
T |
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